AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0582200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0582200 MtrunA17_Chr4g0012861 97.590 581 13 1 1 581 1 580 0.0 1178
Msa0582200 MtrunA17_Chr3g0107701 48.986 592 270 7 19 581 16 604 3.88e-176 522
Msa0582200 MtrunA17_Chr5g0432721 45.017 582 305 6 1 571 1 578 2.15e-161 480
Msa0582200 MtrunA17_Chr2g0281191 56.410 312 98 4 270 581 308 581 4.63e-105 337
Msa0582200 MtrunA17_Chr2g0281191 43.411 129 56 2 4 132 29 140 4.67e-27 116
Msa0582200 MtrunA17_Chr7g0244871 68.478 92 29 0 308 399 6 97 1.69e-39 139
Msa0582200 MtrunA17_Chr7g0251891 37.838 111 68 1 314 423 16 126 3.48e-20 89.0
Msa0582200 MtrunA17_Chr7g0237841 35.714 98 62 1 314 410 623 720 6.46e-15 78.2
Msa0582200 MtrunA17_Chr1g0178071 36.090 133 65 6 295 414 54 179 7.22e-15 76.3
Msa0582200 MtrunA17_Chr8g0345771 37.273 110 61 4 314 417 171 278 1.15e-14 77.0
Msa0582200 MtrunA17_Chr5g0422501 35.833 120 63 4 314 421 235 352 1.73e-14 75.9
Msa0582200 MtrunA17_Chr7g0244881 41.441 111 62 2 199 306 3 113 3.22e-14 69.3
Msa0582200 MtrunA17_Chr7g0276471 40.659 91 49 3 314 401 117 205 4.66e-14 74.7
Msa0582200 MtrunA17_Chr7g0266821 39.252 107 58 5 319 421 65 168 4.40e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0582200 AT4G32010.2 52.981 587 195 11 1 581 1 512 0.0 571
Msa0582200 AT4G32010.1 52.623 591 195 12 1 581 1 516 0.0 566
Msa0582200 AT2G30470.1 49.744 585 239 15 1 581 6 539 1.27e-168 499
Msa0582200 AT4G21550.3 34.576 590 289 13 3 570 14 528 1.23e-96 305
Msa0582200 AT4G21550.1 34.732 596 281 11 3 571 14 528 6.31e-91 295
Msa0582200 AT4G21550.2 33.621 580 277 12 3 555 14 512 1.22e-90 289
Msa0582200 AT3G26790.1 39.091 110 66 1 314 422 91 200 2.19e-20 92.8
Msa0582200 AT5G06250.4 32.948 173 95 5 314 467 45 215 4.90e-17 82.4
Msa0582200 AT5G06250.5 32.948 173 95 5 314 467 45 215 5.79e-17 81.6
Msa0582200 AT5G06250.2 32.948 173 95 5 314 467 45 215 5.95e-17 82.0
Msa0582200 AT1G13260.1 39.640 111 60 5 313 418 186 294 1.15e-15 79.0
Msa0582200 AT1G28300.1 40.741 108 60 3 294 398 149 255 1.26e-15 79.3
Msa0582200 AT3G24650.1 37.931 116 70 2 314 427 571 686 1.52e-15 80.5
Msa0582200 AT2G36080.4 39.815 108 56 4 314 414 37 142 2.23e-15 74.7
Msa0582200 AT2G36080.2 39.815 108 56 4 314 414 37 142 2.23e-15 74.7
Msa0582200 AT5G06250.1 33.103 145 81 4 314 444 45 187 2.47e-15 77.0
Msa0582200 AT5G06250.3 33.103 145 81 4 314 444 45 187 2.82e-15 76.6
Msa0582200 AT2G36080.1 39.815 108 56 4 314 414 37 142 3.35e-15 75.9
Msa0582200 AT2G36080.3 39.815 108 56 4 314 414 37 142 3.47e-15 75.9
Msa0582200 AT4G01500.1 38.261 115 59 4 297 401 9 121 1.11e-14 75.9
Msa0582200 AT1G68840.2 43.011 93 46 4 314 401 187 277 3.42e-14 74.7
Msa0582200 AT1G68840.1 43.011 93 46 4 314 401 187 277 3.42e-14 74.7
Msa0582200 AT3G11580.4 36.207 116 57 4 314 414 28 141 3.47e-14 72.8
Msa0582200 AT3G11580.2 36.207 116 57 4 314 414 28 141 3.47e-14 72.8
Msa0582200 AT3G11580.5 36.207 116 57 4 314 414 28 141 3.47e-14 72.8
Msa0582200 AT2G46870.1 39.560 91 50 3 314 401 34 122 4.39e-14 73.9
Msa0582200 AT3G11580.1 36.207 116 57 4 314 414 28 141 9.03e-14 72.4
Msa0582200 AT1G01030.2 40.659 91 49 3 314 401 55 143 3.27e-13 71.6
Msa0582200 AT1G01030.1 40.659 91 49 3 314 401 55 143 3.78e-13 71.6
Msa0582200 AT3G11580.3 36.207 116 57 4 314 414 28 141 8.42e-13 70.5

Find 198 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATGTTTCAATTTAGATTT+TGG 0.133418 4_2:+367647 Msa0582200:CDS
TACATCCTGCTATTATTATT+TGG 0.167699 4_2:-367670 None:intergenic
CAACTCTTGATCTGTAATTC+TGG 0.172835 4_2:-367185 None:intergenic
TTACCCTCTGTTGGAGAATT+TGG 0.188202 4_2:+366809 Msa0582200:CDS
AACGGTTACCGGAGAGAAAA+TGG 0.205781 4_2:-363746 None:intergenic
CGGCCGAGTTGCGGTGGTTT+TGG 0.210203 4_2:-363839 None:intergenic
GCATACCCCTCACATTTAAT+TGG 0.234093 4_2:-366688 None:intergenic
TGAACGGAGGAGAAGAAGTT+AGG 0.266525 4_2:-363781 None:intergenic
AAGAAAAGAACTCGAAATAT+TGG 0.272591 4_2:+368695 Msa0582200:CDS
TCAAGTGAAACTTCCTATTC+TGG 0.278901 4_2:+368476 Msa0582200:CDS
CCAACAGAGGGTAAAACTTC+TGG 0.283471 4_2:-366800 None:intergenic
GAGGCCTTGCTATACGTATC+TGG 0.288912 4_2:-367117 None:intergenic
ATTACTTCAGCACATGCTTT+TGG 0.292122 4_2:-367445 None:intergenic
CCTATATTAAGTGGTTATTC+TGG 0.299020 4_2:+368515 Msa0582200:CDS
TTTGCTGTTCCAGATTCATT+AGG 0.306327 4_2:-366623 None:intergenic
CAAACCTCACAATGTTGATT+TGG 0.320944 4_2:+366754 Msa0582200:CDS
ATCAGTTGCTTCCGCGATAT+TGG 0.327434 4_2:+367161 Msa0582200:CDS
ATTCAGGAGCCTCCTGTGTT+TGG 0.329853 4_2:+369304 Msa0582200:intron
TGTGGAATTGAAGTTGAAAA+TGG 0.332556 4_2:+364040 Msa0582200:exon
GTTCCGGTCACCGTTGGTTA+TGG 0.336230 4_2:-363885 None:intergenic
CAACTGCAAGCTGGCGATAC+TGG 0.336996 4_2:+367730 Msa0582200:CDS
AGAGTTGGCCTAGGAGGTTT+AGG 0.341758 4_2:-367058 None:intergenic
ACAACACTTGGCTTAACTTC+TGG 0.343319 4_2:-368809 None:intergenic
CCCTGAGGGGAAACTTATAA+TGG 0.343393 4_2:+368312 Msa0582200:CDS
AATGAAATCCCTAATGAATC+TGG 0.347996 4_2:+366614 Msa0582200:CDS
CACTGGAGCTGAAACTTACT+TGG 0.350730 4_2:+368756 Msa0582200:CDS
ACTTTCTAGAGAGCGCATTT+AGG 0.352085 4_2:-368574 None:intergenic
TCAAGAGTTGCAGCAAATAT+CGG 0.354064 4_2:+367198 Msa0582200:CDS
GGAACTTTCCCTCAAACTTC+TGG 0.357137 4_2:+363903 Msa0582200:five_prime_UTR
TTGCTGTTCCAGATTCATTA+GGG 0.359020 4_2:-366622 None:intergenic
ATGTGAGGGGTATGCAAGTT+GGG 0.375012 4_2:+366696 Msa0582200:CDS
AGGACATTATGAAAGGGATT+TGG 0.378577 4_2:-366965 None:intergenic
AGGCCCTCAGGTTGAGAGAT+AGG 0.381204 4_2:-367589 None:intergenic
ATTACCTGTGCAAGTACTTC+AGG 0.390989 4_2:+366110 Msa0582200:CDS
ATATTTGTGGTACGATCTAC+TGG 0.393389 4_2:+369337 Msa0582200:CDS
TGGCCTTCTTCAGTCTCAAA+AGG 0.396098 4_2:+368535 Msa0582200:CDS
ACTTACTTGGGAAGAGGCTC+AGG 0.399619 4_2:+368769 Msa0582200:CDS
GAACGGAGGAGAAGAAGTTA+GGG 0.405947 4_2:-363780 None:intergenic
ATGTTCCATGCGAAAGAATC+TGG 0.410454 4_2:+365899 Msa0582200:CDS
TTCCTTCCCCGTCCTTCGGC+AGG 0.411704 4_2:-367139 None:intergenic
CCAGAATAACCACTTAATAT+AGG 0.414414 4_2:-368515 None:intergenic
TCTGGTTTGATTTCTCTAGA+AGG 0.414545 4_2:-366782 None:intergenic
AAGGCCTCCTGCCGAAGGAC+GGG 0.419862 4_2:+367132 Msa0582200:CDS
AGAAAAGAACTCGAAATATT+GGG 0.421447 4_2:+368696 Msa0582200:CDS
CCTGTGTTTCCTTCTAAGCC+TGG 0.423109 4_2:-367085 None:intergenic
ACTCTAACTCCAGGCTTAGA+AGG 0.427238 4_2:+367076 Msa0582200:CDS
AACTCTTGATCTGTAATTCT+GGG 0.432750 4_2:-367184 None:intergenic
AATGTCACCTCCACATCTAT+TGG 0.436079 4_2:+367012 Msa0582200:CDS
GGTGACGCTAGCTTTGATTC+CGG 0.437675 4_2:+363924 Msa0582200:five_prime_UTR
ATTCTCATAAACACCAGAAT+AGG 0.444115 4_2:-368489 None:intergenic
CCCATTATAAGTTTCCCCTC+AGG 0.444405 4_2:-368313 None:intergenic
TTCACTTGAATGAGAACCAT+TGG 0.445941 4_2:-368462 None:intergenic
TAATGTCCTTGTTGATGAAA+GGG 0.448219 4_2:+366979 Msa0582200:CDS
TTCTTCTCAGGAACCAGCAC+AGG 0.450915 4_2:-368677 None:intergenic
TGCTGGTCGAATTGGTCGCT+TGG 0.454425 4_2:+367417 Msa0582200:CDS
AATGTGAGGGGTATGCAAGT+TGG 0.455328 4_2:+366695 Msa0582200:CDS
CAATTTCATCGTGAGTCAAA+TGG 0.458649 4_2:+366848 Msa0582200:CDS
ATAATGTCCTTGTTGATGAA+AGG 0.463710 4_2:+366978 Msa0582200:CDS
GGCCTTCTTCAGTCTCAAAA+GGG 0.464157 4_2:+368536 Msa0582200:CDS
TGGAAAGAAGAGTATATTTG+TGG 0.465676 4_2:+369324 Msa0582200:CDS
TGTTGCATGAACGTTGTTTG+TGG 0.466630 4_2:+364071 Msa0582200:CDS
CAGTTGCATAGACTGAATAC+AGG 0.468777 4_2:-367713 None:intergenic
CCTGAGGGGAAACTTATAAT+GGG 0.471341 4_2:+368313 Msa0582200:CDS
GAGAATATACCTATATTAAG+TGG 0.472374 4_2:+368506 Msa0582200:CDS
AACAAATTCTGCTTCAGTAC+AGG 0.472669 4_2:+368348 Msa0582200:CDS
CTGATTCCTTCCCCGTCCTT+CGG 0.474070 4_2:-367143 None:intergenic
AGGCCTCCTGCCGAAGGACG+GGG 0.474201 4_2:+367133 Msa0582200:CDS
TTTGCATTTGTGTTGCAGCT+TGG 0.479105 4_2:-363815 None:intergenic
ACATAGATCGGCGAATTCAC+CGG 0.479610 4_2:-364138 None:intergenic
CACCGTTGGTTATGGAGATA+AGG 0.481775 4_2:-363877 None:intergenic
GCAAGTGATGCTGGTCGAAT+TGG 0.484028 4_2:+367409 Msa0582200:CDS
CAAGAGTTGCAGCAAATATC+GGG 0.484696 4_2:+367199 Msa0582200:CDS
CCTCACAATGTTGATTTGGA+TGG 0.486454 4_2:+366758 Msa0582200:CDS
AGATAAGGCGGTGGTGGTGA+CGG 0.490172 4_2:-363862 None:intergenic
CGATTCGGTGGCGGAAAGGT+TGG 0.493342 4_2:+364105 Msa0582200:CDS
TATTGATAGCGAGGATGCAC+TGG 0.493835 4_2:+368739 Msa0582200:CDS
GTGGAACCTCTACGTCGATT+CGG 0.494921 4_2:+364090 Msa0582200:CDS
TCTAAGCCTGGAGTTAGAGT+TGG 0.495026 4_2:-367073 None:intergenic
TGCCCGGCAGTGCATATCTC+TGG 0.495200 4_2:+366661 Msa0582200:CDS
TTTGGCCAAATAATAATAGC+AGG 0.500753 4_2:+367665 Msa0582200:CDS
ATCAACAAGGACATTATGAA+AGG 0.502025 4_2:-366972 None:intergenic
CTTCCCCGTCCTTCGGCAGG+AGG 0.504076 4_2:-367136 None:intergenic
GTGAGTCAAATGGTTCATCT+AGG 0.506203 4_2:+366858 Msa0582200:CDS
GGCTAACCAATTAAATGTGA+GGG 0.506229 4_2:+366682 Msa0582200:CDS
CGGAGGAGAAGAAGTTAGGG+AGG 0.506566 4_2:-363777 None:intergenic
TCTCCATAACCAACGGTGAC+CGG 0.506643 4_2:+363882 Msa0582200:five_prime_UTR
TCACTTGAATGAGAACCATT+GGG 0.509159 4_2:-368461 None:intergenic
CCTGGAGTTAGAGTTGGCCT+AGG 0.510835 4_2:-367067 None:intergenic
GTTGTCTTTACCACCTGTGC+TGG 0.513012 4_2:+368664 Msa0582200:CDS
CAAGGCCTCCTGCCGAAGGA+CGG 0.513301 4_2:+367131 Msa0582200:CDS
CAGTCTATGCAACTGCAAGC+TGG 0.514895 4_2:+367721 Msa0582200:CDS
TGCAGTAACATTTAGCCGTA+TGG 0.517779 4_2:+368288 Msa0582200:intron
GGAATTATGCAGAAAATGAC+AGG 0.518137 4_2:+366717 Msa0582200:CDS
TTCTAGAGAGCGCATTTAGG+TGG 0.520190 4_2:-368571 None:intergenic
TCCAACCAGATTCTTTCGCA+TGG 0.521579 4_2:-365904 None:intergenic
CCCTCCTATCTCTCAACCTG+AGG 0.521917 4_2:+367585 Msa0582200:CDS
AAAATGACAGGATGAGGTGC+TGG 0.522488 4_2:+366729 Msa0582200:CDS
TAAATGCGCTCTCTAGAAAG+TGG 0.523105 4_2:+368576 Msa0582200:CDS
CCATTATAAGTTTCCCCTCA+GGG 0.523154 4_2:-368312 None:intergenic
GCAAGATATATATGAATCAC+TGG 0.525449 4_2:+366904 Msa0582200:CDS
TTATGGAGATAAGGCGGTGG+TGG 0.526026 4_2:-363868 None:intergenic
ACGGTTACCGGAGAGAAAAT+GGG 0.527913 4_2:-363745 None:intergenic
CCGATCTATGTGATAAGTGC+GGG 0.532091 4_2:+364150 Msa0582200:CDS
ATGTAGAAATGCCTGAAAGC+AGG 0.533071 4_2:+368630 Msa0582200:CDS
AGGCCTTGCTATACGTATCT+GGG 0.533919 4_2:-367116 None:intergenic
TGGTGACGGCGGCCGAGTTG+CGG 0.534823 4_2:-363848 None:intergenic
ATGCAGAAAATGACAGGATG+AGG 0.535830 4_2:+366723 Msa0582200:CDS
TCCTCGATCATGACAACACT+TGG 0.535986 4_2:-368821 None:intergenic
TAGCGTCACCAGAAGTTTGA+GGG 0.536138 4_2:-363911 None:intergenic
GGAAACTTATAATGGGGTAC+AGG 0.536432 4_2:+368320 Msa0582200:CDS
CTAGCGTCACCAGAAGTTTG+AGG 0.536437 4_2:-363912 None:intergenic
TAGCCAGAGATATGCACTGC+CGG 0.538092 4_2:-366664 None:intergenic
TCAACAAGGACATTATGAAA+GGG 0.542098 4_2:-366971 None:intergenic
ATGCTTAGTGCAAGTGATGC+TGG 0.543355 4_2:+367400 Msa0582200:CDS
CAGTTGGTGCTGACATGGAT+TGG 0.544785 4_2:+368603 Msa0582200:CDS
AGCCAGAGATATGCACTGCC+GGG 0.550053 4_2:-366663 None:intergenic
GAAGAAAGAAAGAGAAGGTG+AGG 0.550740 4_2:-363723 None:intergenic
ATACGCAAAGGAAGGCCCTC+AGG 0.550975 4_2:-367601 None:intergenic
ATTTGGCAAAGGAGCGGTAA+GGG 0.556170 4_2:-366948 None:intergenic
GGAGTTAGAGTTGGCCTAGG+AGG 0.557806 4_2:-367064 None:intergenic
AAGTCCTGAAGTACTTGCAC+AGG 0.558364 4_2:-366114 None:intergenic
GAACTCAGTTGGTGCTGACA+TGG 0.559385 4_2:+368598 Msa0582200:CDS
AAGATGTGAAAGGAAAAGAA+TGG 0.562266 4_2:+367626 Msa0582200:CDS
TTTCCGTCTAATATGCCCAA+TGG 0.563491 4_2:+368446 Msa0582200:CDS
GTTTCCCCTCAGGGTCCATA+CGG 0.563865 4_2:-368303 None:intergenic
CTTGGCTTAACTTCTGGAGG+TGG 0.565044 4_2:-368803 None:intergenic
GCTGAAACTTACTTGGGAAG+AGG 0.565759 4_2:+368763 Msa0582200:CDS
AAAGGTTGGATTCTTCGATC+CGG 0.567319 4_2:+364119 Msa0582200:CDS
TTCTCAGGAACCAGCACAGG+TGG 0.570575 4_2:-368674 None:intergenic
AGAAGTTTGAGGGAAAGTTC+CGG 0.572690 4_2:-363901 None:intergenic
CCTCCTATCTCTCAACCTGA+GGG 0.572708 4_2:+367586 Msa0582200:CDS
ACGTCGATTCGGTGGCGGAA+AGG 0.573751 4_2:+364101 Msa0582200:CDS
CCTCTACGTCGATTCGGTGG+CGG 0.575763 4_2:+364096 Msa0582200:CDS
GATTTGGCAAAGGAGCGGTA+AGG 0.576714 4_2:-366949 None:intergenic
TCTAGAAAGTGGAACTCAGT+TGG 0.578317 4_2:+368587 Msa0582200:CDS
TCTAGAGAGCGCATTTAGGT+GGG 0.579194 4_2:-368570 None:intergenic
TTCAAAGAGTGGCACAATGG+TGG 0.580676 4_2:-367374 None:intergenic
ACTTATAATGGGGTACAGGA+AGG 0.580867 4_2:+368324 Msa0582200:CDS
TCCATGCGAAAGAATCTGGT+TGG 0.581712 4_2:+365903 Msa0582200:CDS
TGACGGCGGCCGAGTTGCGG+TGG 0.581724 4_2:-363845 None:intergenic
CCTCAGGTTGAGAGATAGGA+GGG 0.582109 4_2:-367585 None:intergenic
CTTGGATGAGAGAGTTTGAA+CGG 0.585561 4_2:-363797 None:intergenic
AAGTAAATAATGTTGTTGCC+CGG 0.587069 4_2:+366645 Msa0582200:CDS
TCAAATGGTTCATCTAGGAC+TGG 0.587332 4_2:+366863 Msa0582200:CDS
CCTAGGCCAACTCTAACTCC+AGG 0.589422 4_2:+367067 Msa0582200:CDS
ATAGCAAGGCCTCCTGCCGA+AGG 0.591462 4_2:+367127 Msa0582200:CDS
AATGGGAAGAAAGAAAGAGA+AGG 0.592521 4_2:-363728 None:intergenic
CGCCTTATCTCCATAACCAA+CGG 0.592863 4_2:+363875 Msa0582200:five_prime_UTR
ATACTCTTCTTTCCAAACAC+AGG 0.593392 4_2:-369316 None:intergenic
GGGAAAGTTCCGGTCACCGT+TGG 0.594565 4_2:-363891 None:intergenic
GATCTAGACGCCAATAGATG+TGG 0.596357 4_2:-367022 None:intergenic
ACACTTGGCTTAACTTCTGG+AGG 0.596735 4_2:-368806 None:intergenic
TTATGAAAGGGATTTGGCAA+AGG 0.597001 4_2:-366959 None:intergenic
CCCGCACTTATCACATAGAT+CGG 0.598617 4_2:-364150 None:intergenic
CCCTCAGGTTGAGAGATAGG+AGG 0.598922 4_2:-367586 None:intergenic
GCTTCCAAATTCTCCAACAG+AGG 0.599653 4_2:-366813 None:intergenic
TTCACATCTTGGATACGCAA+AGG 0.602051 4_2:-367613 None:intergenic
TTGAAGCAACACATCCGCAA+TGG 0.605461 4_2:-366046 None:intergenic
GAACCATTGGGCATATTAGA+CGG 0.606117 4_2:-368449 None:intergenic
CATCTTGGATACGCAAAGGA+AGG 0.606572 4_2:-367609 None:intergenic
CTCTTCTTTCCAAACACAGG+AGG 0.606920 4_2:-369313 None:intergenic
CCATCCAAATCAACATTGTG+AGG 0.607409 4_2:-366758 None:intergenic
TGGCTAACCAATTAAATGTG+AGG 0.608102 4_2:+366681 Msa0582200:CDS
GAGGTTGCTTATTGATAGCG+AGG 0.613509 4_2:+368730 Msa0582200:CDS
CTCCTGCCGAAGGACGGGGA+AGG 0.614694 4_2:+367137 Msa0582200:CDS
AATCCAAAACCACCGCAACT+CGG 0.615240 4_2:+363836 Msa0582200:five_prime_UTR
TTGCGTATCCAAGATGTGAA+AGG 0.616182 4_2:+367616 Msa0582200:CDS
AGAGTGTACTTCATGTGGCA+AGG 0.623087 4_2:+365928 Msa0582200:CDS
TTTGTTCCCTTTCATCAACA+AGG 0.624287 4_2:-366985 None:intergenic
TGGTTATGGAGATAAGGCGG+TGG 0.625793 4_2:-363871 None:intergenic
CTTCCAAATTCTCCAACAGA+GGG 0.627135 4_2:-366812 None:intergenic
TAAGGCGGTGGTGGTGACGG+CGG 0.631833 4_2:-363859 None:intergenic
CTAGACGCCAATAGATGTGG+AGG 0.641575 4_2:-367019 None:intergenic
TATCTGCAGCGTCTCCATTG+CGG 0.646198 4_2:+366032 Msa0582200:intron
CAGCTTGAAATACTTGACAC+TGG 0.646808 4_2:+366074 Msa0582200:CDS
GTAATTCTGGGCCAATATCG+CGG 0.648517 4_2:-367172 None:intergenic
TATTTGTGGTACGATCTACT+GGG 0.648538 4_2:+369338 Msa0582200:CDS
CCGCCACCGAATCGACGTAG+AGG 0.651077 4_2:-364096 None:intergenic
GCCAAGTGTTGTCATGATCG+AGG 0.651574 4_2:+368820 Msa0582200:CDS
AGTTGCATAGACTGAATACA+GGG 0.651610 4_2:-367712 None:intergenic
ACTGGAGCTGAAACTTACTT+GGG 0.656896 4_2:+368757 Msa0582200:CDS
TTTCCCAGATACGTATAGCA+AGG 0.657040 4_2:+367113 Msa0582200:CDS
CTTAGAAGGAAACACAGGCA+TGG 0.658844 4_2:+367090 Msa0582200:CDS
GCTAACCAATTAAATGTGAG+GGG 0.663001 4_2:+366683 Msa0582200:CDS
GAACCTCTACGTCGATTCGG+TGG 0.665625 4_2:+364093 Msa0582200:CDS
GCCGATCTATGTGATAAGTG+CGG 0.667157 4_2:+364149 Msa0582200:CDS
TTTAGCCGTATGGACCCTGA+GGG 0.672269 4_2:+368298 Msa0582200:CDS
AAAGGGATTTGGCAAAGGAG+CGG 0.674141 4_2:-366954 None:intergenic
CTGAGGGGAAACTTATAATG+GGG 0.681685 4_2:+368314 Msa0582200:CDS
CCAGGCTTAGAAGGAAACAC+AGG 0.682919 4_2:+367085 Msa0582200:CDS
CGTTGGTTATGGAGATAAGG+CGG 0.684697 4_2:-363874 None:intergenic
ATTTAGCCGTATGGACCCTG+AGG 0.687200 4_2:+368297 Msa0582200:CDS
TTGCATAGACTGAATACAGG+GGG 0.707100 4_2:-367710 None:intergenic
TGGAGAGAGTGTACTTCATG+TGG 0.711681 4_2:+365923 Msa0582200:CDS
GGATGAGAGAGTTTGAACGG+AGG 0.713374 4_2:-363794 None:intergenic
CTTGAAATACTTGACACTGG+TGG 0.733966 4_2:+366077 Msa0582200:CDS
TTAGCCGTATGGACCCTGAG+GGG 0.752430 4_2:+368299 Msa0582200:CDS
GTTGCATAGACTGAATACAG+GGG 0.770443 4_2:-367711 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTGTTAATTTGAATTT+GGG + chr4_2:364390-364409 Msa0582200:intron 10.0%
!! TCAAAAATAAAATAAAATTG+AGG + chr4_2:364427-364446 Msa0582200:intron 10.0%
!!! TTTTTTATTTTTTGAAAACT+CGG - chr4_2:365051-365070 None:intergenic 10.0%
!! TTCTTTAAATTGTTAATTAT+AGG + chr4_2:367245-367264 Msa0582200:intron 10.0%
!!! ATTATTTAGATTTTTTTCTT+TGG + chr4_2:367860-367879 Msa0582200:intron 10.0%
!! AGAAAAAAAATATTATATAG+AGG - chr4_2:367978-367997 None:intergenic 10.0%
!!! AAAATTTAGTTCAATATTTT+TGG - chr4_2:368092-368111 None:intergenic 10.0%
!!! TTATTTGATACATTTTTTTT+TGG + chr4_2:368203-368222 Msa0582200:intron 10.0%
!!! GTTTTTTGTTAATTTGAATT+TGG + chr4_2:364389-364408 Msa0582200:intron 15.0%
!!! TTTTTGTTAATTTGAATTTG+GGG + chr4_2:364391-364410 Msa0582200:intron 15.0%
!!! ATAGTTTAAAACGTTATTTT+TGG + chr4_2:364666-364685 Msa0582200:intron 15.0%
!!! TATCAGCAATAATTATATTT+TGG - chr4_2:364764-364783 None:intergenic 15.0%
!!! AATTTCTTTTTCCATTTTTT+GGG - chr4_2:364809-364828 None:intergenic 15.0%
!!! GAGTTTTCAAAAAATAAAAA+AGG + chr4_2:365050-365069 Msa0582200:intron 15.0%
!! CACCTAAAAAAATAATTATA+CGG + chr4_2:365222-365241 Msa0582200:intron 15.0%
!!! ATATATATGATTTTGAAGTT+TGG + chr4_2:365256-365275 Msa0582200:intron 15.0%
!! TATGAATTGATAGAAAATTA+CGG + chr4_2:366387-366406 Msa0582200:intron 15.0%
!!! TGATTTGATTTGAAATTGTA+CGG + chr4_2:364235-364254 Msa0582200:intron 20.0%
!!! CAGTGAATATTTGAATTTTT+AGG + chr4_2:364264-364283 Msa0582200:intron 20.0%
!!! TGTTTGTTAAATTGAATTTG+AGG + chr4_2:364329-364348 Msa0582200:intron 20.0%
!! AAGAATCAACAACATAAAAA+GGG - chr4_2:364553-364572 None:intergenic 20.0%
!! AAAGAATCAACAACATAAAA+AGG - chr4_2:364554-364573 None:intergenic 20.0%
!! AAATAAAATGTATGTAGTTG+CGG + chr4_2:364616-364635 Msa0582200:intron 20.0%
!!! CAATTTCTTTTTCCATTTTT+TGG - chr4_2:364810-364829 None:intergenic 20.0%
!! AAAAAAGCTGGATAATTATA+TGG + chr4_2:365192-365211 Msa0582200:intron 20.0%
!!! CGTATAATTATTTTTTTAGG+TGG - chr4_2:365224-365243 None:intergenic 20.0%
!!! GACCGTATAATTATTTTTTT+AGG - chr4_2:365227-365246 None:intergenic 20.0%
!!! ATTTTTTACTTAGTTGAAGT+TGG + chr4_2:365786-365805 Msa0582200:intron 20.0%
!!! TTTTTTACTTAGTTGAAGTT+GGG + chr4_2:365787-365806 Msa0582200:intron 20.0%
!! CATTAAAATACTAAAGTTGT+GGG - chr4_2:365980-365999 None:intergenic 20.0%
!! TCATTAAAATACTAAAGTTG+TGG - chr4_2:365981-366000 None:intergenic 20.0%
!!! TTTAGTATTTTAATGAGCTA+TGG + chr4_2:365985-366004 Msa0582200:intron 20.0%
!! GGTTATTTATATATGTAACA+AGG - chr4_2:366160-366179 None:intergenic 20.0%
!! TAATCATAAATTCTGATCTT+GGG - chr4_2:366246-366265 None:intergenic 20.0%
!! ATAATCATAAATTCTGATCT+TGG - chr4_2:366247-366266 None:intergenic 20.0%
!!! ATCTTGTTTCATTATGTAAT+TGG + chr4_2:366333-366352 Msa0582200:intron 20.0%
!!! GTAATTTTCTATCAATTCAT+AGG - chr4_2:366388-366407 None:intergenic 20.0%
!! TAAAGAACTAATTACAAAGT+TGG - chr4_2:367232-367251 None:intergenic 20.0%
!!! TAATAATGGGTAAATACAAA+AGG - chr4_2:367491-367510 None:intergenic 20.0%
!!! ATTTTTTCAGTTCTAAGAAA+TGG - chr4_2:367543-367562 None:intergenic 20.0%
!! TTCTTAGAACTGAAAAAATA+TGG + chr4_2:367544-367563 Msa0582200:intron 20.0%
!!! ACTAAATTTTCTTGTGTTTT+TGG + chr4_2:368102-368121 Msa0582200:intron 20.0%
!!! CTAAATTTTCTTGTGTTTTT+GGG + chr4_2:368103-368122 Msa0582200:intron 20.0%
!!! TAAATTTTCTTGTGTTTTTG+GGG + chr4_2:368104-368123 Msa0582200:intron 20.0%
!! TATTAAATTACCTATTAAGC+AGG + chr4_2:368418-368437 Msa0582200:intron 20.0%
!! AAAATATAAGTTCTATGACA+TGG + chr4_2:369081-369100 Msa0582200:intron 20.0%
!! GACAATTTCGATTTTGAATT+TGG + chr4_2:363950-363969 Msa0582200:intron 25.0%
!!! GATTTTGAATTTGGTGAATT+TGG + chr4_2:363959-363978 Msa0582200:intron 25.0%
!!! TGAGTTGATTCAAATTGTTA+GGG + chr4_2:363982-364001 Msa0582200:intron 25.0%
!!! AATTTGTTGTGAATTTGTGA+AGG + chr4_2:364016-364035 Msa0582200:intron 25.0%
! TGGTTAAGATTCATACAAAA+CGG - chr4_2:364513-364532 None:intergenic 25.0%
!!! TGTTGTTGATTCTTTATAGT+TGG + chr4_2:364559-364578 Msa0582200:intron 25.0%
! TGATAAATACTAAGTAGCAT+AGG + chr4_2:364779-364798 Msa0582200:intron 25.0%
!!! ATTATTTTTTTAGGTGGAAC+AGG - chr4_2:365218-365237 None:intergenic 25.0%
! TAAACAATGTTGAATGAGTA+CGG + chr4_2:365313-365332 Msa0582200:intron 25.0%
!!! GAACACATTTTAACTTATAC+AGG - chr4_2:365726-365745 None:intergenic 25.0%
! GATCATGAATTTACTATGAT+TGG + chr4_2:365750-365769 Msa0582200:intron 25.0%
! AAACAGATGAAATTTCGTTT+CGG + chr4_2:366201-366220 Msa0582200:intron 25.0%
! TTGGTATGTTAATTATTGAC+TGG + chr4_2:366352-366371 Msa0582200:intron 25.0%
!! ATACAAAGTAACCCAATTTT+GGG - chr4_2:366525-366544 None:intergenic 25.0%
!! AATACAAAGTAACCCAATTT+TGG - chr4_2:366526-366545 None:intergenic 25.0%
!! AAGTTATCATTGCCAATTTT+GGG - chr4_2:366580-366599 None:intergenic 25.0%
!! TAAGTTATCATTGCCAATTT+TGG - chr4_2:366581-366600 None:intergenic 25.0%
! ATTTCCTTAACCATGATTTA+TGG + chr4_2:367333-367352 Msa0582200:intron 25.0%
!! GGATGTTTCAATTTAGATTT+TGG + chr4_2:367647-367666 Msa0582200:CDS 25.0%
! TACATCCTGCTATTATTATT+TGG - chr4_2:367673-367692 None:intergenic 25.0%
!!! AAATTGCCCATTTTAAGAAT+TGG + chr4_2:367783-367802 Msa0582200:intron 25.0%
! AAGGTTCCAATTCTTAAAAT+GGG - chr4_2:367792-367811 None:intergenic 25.0%
! AAACACATACAGAAAAAAGA+AGG - chr4_2:367811-367830 None:intergenic 25.0%
! GAGAATATACCTATATTAAG+TGG + chr4_2:368506-368525 Msa0582200:CDS 25.0%
! AAGAAAAGAACTCGAAATAT+TGG + chr4_2:368695-368714 Msa0582200:CDS 25.0%
! AGAAAAGAACTCGAAATATT+GGG + chr4_2:368696-368715 Msa0582200:CDS 25.0%
!! TATAGTTTAACTTTGACGTA+TGG + chr4_2:369260-369279 Msa0582200:intron 25.0%
!! GTGAGTTGATTCAAATTGTT+AGG + chr4_2:363981-364000 Msa0582200:intron 30.0%
TGTGGAATTGAAGTTGAAAA+TGG + chr4_2:364040-364059 Msa0582200:exon 30.0%
TTAAGATTCATACAAAACGG+TGG - chr4_2:364510-364529 None:intergenic 30.0%
!! ATGTTTGCGCTTTAACTTTT+TGG + chr4_2:364584-364603 Msa0582200:intron 30.0%
!!! TTTTTTGAAAACTCGGTATC+CGG - chr4_2:365044-365063 None:intergenic 30.0%
!! TAGATATTGTTTGTTGTGCT+AGG - chr4_2:365076-365095 None:intergenic 30.0%
TATGTCTACATCAAAAAAGC+TGG + chr4_2:365180-365199 Msa0582200:intron 30.0%
! TTTGGAAAGAGCTTTCTTTT+TGG + chr4_2:365274-365293 Msa0582200:intron 30.0%
CTGCAGATAATAGAACAAAT+AGG - chr4_2:366021-366040 None:intergenic 30.0%
AATGTATGATGATAGATAGC+AGG + chr4_2:366283-366302 Msa0582200:intron 30.0%
! AATCGTGCTTTTCCATATAT+AGG + chr4_2:366430-366449 Msa0582200:intron 30.0%
!!! GTTGTTGCTTTTTGCTTATA+TGG + chr4_2:366455-366474 Msa0582200:intron 30.0%
ACGGTTAAACTTCAAAAATG+AGG - chr4_2:366497-366516 None:intergenic 30.0%
AATGAAATCCCTAATGAATC+TGG + chr4_2:366614-366633 Msa0582200:CDS 30.0%
AAGTAAATAATGTTGTTGCC+CGG + chr4_2:366645-366664 Msa0582200:CDS 30.0%
GCAAGATATATATGAATCAC+TGG + chr4_2:366904-366923 Msa0582200:CDS 30.0%
TCAACAAGGACATTATGAAA+GGG - chr4_2:366974-366993 None:intergenic 30.0%
ATCAACAAGGACATTATGAA+AGG - chr4_2:366975-366994 None:intergenic 30.0%
! ATAATGTCCTTGTTGATGAA+AGG + chr4_2:366978-366997 Msa0582200:CDS 30.0%
! TAATGTCCTTGTTGATGAAA+GGG + chr4_2:366979-366998 Msa0582200:CDS 30.0%
AACTCTTGATCTGTAATTCT+GGG - chr4_2:367187-367206 None:intergenic 30.0%
!! GTTAAGGAAATGTTTTTCAG+AGG - chr4_2:367324-367343 None:intergenic 30.0%
CATACCATAAATCATGGTTA+AGG - chr4_2:367340-367359 None:intergenic 30.0%
CTTGAACATACCATAAATCA+TGG - chr4_2:367346-367365 None:intergenic 30.0%
! ATTCTTTTCCTTTCACATCT+TGG - chr4_2:367627-367646 None:intergenic 30.0%
AAGATGTGAAAGGAAAAGAA+TGG + chr4_2:367626-367645 Msa0582200:CDS 30.0%
TTTGGCCAAATAATAATAGC+AGG + chr4_2:367665-367684 Msa0582200:CDS 30.0%
GAAGGTTCCAATTCTTAAAA+TGG - chr4_2:367793-367812 None:intergenic 30.0%
GCTGCAATATAAGCTAAATT+TGG + chr4_2:367835-367854 Msa0582200:intron 30.0%
!! GTTTGCTATATGAGCTAAAA+TGG - chr4_2:368380-368399 None:intergenic 30.0%
ATTCTCATAAACACCAGAAT+AGG - chr4_2:368492-368511 None:intergenic 30.0%
CCAGAATAACCACTTAATAT+AGG - chr4_2:368518-368537 None:intergenic 30.0%
CCTATATTAAGTGGTTATTC+TGG + chr4_2:368515-368534 Msa0582200:CDS 30.0%
TTCTGATATTTAGATTCACC+AGG - chr4_2:369060-369079 None:intergenic 30.0%
AAAATTTGCAACTCCAATAC+TGG - chr4_2:369145-369164 None:intergenic 30.0%
GAACTTACTTCTATTCATTC+AGG + chr4_2:369288-369307 Msa0582200:intron 30.0%
! TGGAAAGAAGAGTATATTTG+TGG + chr4_2:369324-369343 Msa0582200:CDS 30.0%
AATGGGAAGAAAGAAAGAGA+AGG - chr4_2:363731-363750 None:intergenic 35.0%
AGGAAATGAAAAACGGTTAC+CGG - chr4_2:363760-363779 None:intergenic 35.0%
GTTAGGGAGGAAATGAAAAA+CGG - chr4_2:363767-363786 None:intergenic 35.0%
CAAAATCGAAATTGTCGTAC+CGG - chr4_2:363946-363965 None:intergenic 35.0%
TTGTGAATTTGTGAAGGTTG+TGG + chr4_2:364022-364041 Msa0582200:intron 35.0%
AAAGGGTCAAAACGACAAAA+CGG - chr4_2:364536-364555 None:intergenic 35.0%
GCATAGGATTTCCCAAAAAA+TGG + chr4_2:364795-364814 Msa0582200:intron 35.0%
! AGTTAGCTGAACATTTTCTG+TGG + chr4_2:365095-365114 Msa0582200:intron 35.0%
CTGAAAACTCACACTTAAAG+AGG - chr4_2:365146-365165 None:intergenic 35.0%
TTTACAGTCTGATCTTGATC+AGG + chr4_2:365561-365580 Msa0582200:intron 35.0%
TGCTTGAAAACTATGTCACA+AGG - chr4_2:365649-365668 None:intergenic 35.0%
! TAGAGCATGAATCTGTTTCT+TGG - chr4_2:365817-365836 None:intergenic 35.0%
TCATGCTCTAATTCTTACTC+TGG + chr4_2:365827-365846 Msa0582200:intron 35.0%
AAGTTGTGGGTAAAGAAAAG+TGG - chr4_2:365967-365986 None:intergenic 35.0%
CCAGAGAGGTAAATCATAAA+TGG - chr4_2:366181-366200 None:intergenic 35.0%
CCATTTATGATTTACCTCTC+TGG + chr4_2:366178-366197 Msa0582200:intron 35.0%
AATTTCATCTGTTTCCAGAG+AGG - chr4_2:366195-366214 None:intergenic 35.0%
AAGCAACAACCTCCTATATA+TGG - chr4_2:366445-366464 None:intergenic 35.0%
TAACCGTATCTTCCCAAAAT+TGG + chr4_2:366510-366529 Msa0582200:intron 35.0%
AACCGTATCTTCCCAAAATT+GGG + chr4_2:366511-366530 Msa0582200:intron 35.0%
!! AACCCAATTTTGGGAAGATA+CGG - chr4_2:366516-366535 None:intergenic 35.0%
TAACTGTATCCTCCCAAAAT+TGG + chr4_2:366565-366584 Msa0582200:intron 35.0%
! TTATCATTGCCAATTTTGGG+AGG - chr4_2:366577-366596 None:intergenic 35.0%
! TTGCTGTTCCAGATTCATTA+GGG - chr4_2:366625-366644 None:intergenic 35.0%
!! TTTGCTGTTCCAGATTCATT+AGG - chr4_2:366626-366645 None:intergenic 35.0%
TGGCTAACCAATTAAATGTG+AGG + chr4_2:366681-366700 Msa0582200:CDS 35.0%
GGCTAACCAATTAAATGTGA+GGG + chr4_2:366682-366701 Msa0582200:CDS 35.0%
GCTAACCAATTAAATGTGAG+GGG + chr4_2:366683-366702 Msa0582200:CDS 35.0%
GGAATTATGCAGAAAATGAC+AGG + chr4_2:366717-366736 Msa0582200:CDS 35.0%
! CAAACCTCACAATGTTGATT+TGG + chr4_2:366754-366773 Msa0582200:CDS 35.0%
! TCTGGTTTGATTTCTCTAGA+AGG - chr4_2:366785-366804 None:intergenic 35.0%
CAATTTCATCGTGAGTCAAA+TGG + chr4_2:366848-366867 Msa0582200:CDS 35.0%
TTATGAAAGGGATTTGGCAA+AGG - chr4_2:366962-366981 None:intergenic 35.0%
AGGACATTATGAAAGGGATT+TGG - chr4_2:366968-366987 None:intergenic 35.0%
TTTGTTCCCTTTCATCAACA+AGG - chr4_2:366988-367007 None:intergenic 35.0%
! ATCTTTTACCTAAACCTCCT+AGG + chr4_2:367050-367069 Msa0582200:CDS 35.0%
CAACTCTTGATCTGTAATTC+TGG - chr4_2:367188-367207 None:intergenic 35.0%
TCAAGAGTTGCAGCAAATAT+CGG + chr4_2:367198-367217 Msa0582200:CDS 35.0%
! CTAAGCATCTTTTCAAAGAG+TGG - chr4_2:367388-367407 None:intergenic 35.0%
! ATTACTTCAGCACATGCTTT+TGG - chr4_2:367448-367467 None:intergenic 35.0%
GAAAAAATATGGCATTGTGC+AGG + chr4_2:367555-367574 Msa0582200:intron 35.0%
!! AGCAGGATGTATGTTTTAGA+AGG + chr4_2:367682-367701 Msa0582200:CDS 35.0%
!!! GCAGGATGTATGTTTTAGAA+GGG + chr4_2:367683-367702 Msa0582200:CDS 35.0%
!!! CAGGATGTATGTTTTAGAAG+GGG + chr4_2:367684-367703 Msa0582200:CDS 35.0%
AGTTGCATAGACTGAATACA+GGG - chr4_2:367715-367734 None:intergenic 35.0%
! ATTTGTTAGCATATTGAGCC+AGG - chr4_2:367926-367945 None:intergenic 35.0%
!!! TTTTCTTGTGTTTTTGGGGA+TGG + chr4_2:368108-368127 Msa0582200:intron 35.0%
!!! TTTCTTGTGTTTTTGGGGAT+GGG + chr4_2:368109-368128 Msa0582200:intron 35.0%
AACAAATTCTGCTTCAGTAC+AGG + chr4_2:368348-368367 Msa0582200:CDS 35.0%
GGAAAAGTTTCCTGCTTAAT+AGG - chr4_2:368431-368450 None:intergenic 35.0%
TCACTTGAATGAGAACCATT+GGG - chr4_2:368464-368483 None:intergenic 35.0%
TTCACTTGAATGAGAACCAT+TGG - chr4_2:368465-368484 None:intergenic 35.0%
TCAAGTGAAACTTCCTATTC+TGG + chr4_2:368476-368495 Msa0582200:CDS 35.0%
!!! TTTCGAGTTCTTTTCTTCTC+AGG - chr4_2:368692-368711 None:intergenic 35.0%
ATATTGGGTCAAAAAGCAAG+AGG + chr4_2:368711-368730 Msa0582200:CDS 35.0%
ATACTCTTCTTTCCAAACAC+AGG - chr4_2:369319-369338 None:intergenic 35.0%
ATATTTGTGGTACGATCTAC+TGG + chr4_2:369337-369356 Msa0582200:CDS 35.0%
TATTTGTGGTACGATCTACT+GGG + chr4_2:369338-369357 Msa0582200:CDS 35.0%
GAAGAAAGAAAGAGAAGGTG+AGG - chr4_2:363726-363745 None:intergenic 40.0%
! CTTTCTTCCCATTTTCTCTC+CGG + chr4_2:363738-363757 Msa0582200:five_prime_UTR 40.0%
CTTGGATGAGAGAGTTTGAA+CGG - chr4_2:363800-363819 None:intergenic 40.0%
TTTGCATTTGTGTTGCAGCT+TGG - chr4_2:363818-363837 None:intergenic 40.0%
AGAAGTTTGAGGGAAAGTTC+CGG - chr4_2:363904-363923 None:intergenic 40.0%
TGTTGCATGAACGTTGTTTG+TGG + chr4_2:364071-364090 Msa0582200:CDS 40.0%
AAAGGTTGGATTCTTCGATC+CGG + chr4_2:364119-364138 Msa0582200:CDS 40.0%
ATGTATGTAGTTGCGGTTGT+TGG + chr4_2:364623-364642 Msa0582200:intron 40.0%
AAACGCCAGATATTGTTCGT+AGG + chr4_2:364853-364872 Msa0582200:intron 40.0%
TTAGGCCTACGAACAATATC+TGG - chr4_2:364861-364880 None:intergenic 40.0%
!!! CATAGGAGTGTGCTTTTTCA+AGG + chr4_2:364911-364930 Msa0582200:intron 40.0%
ATTGTCCATAAGCAAAGCTC+TGG - chr4_2:364983-365002 None:intergenic 40.0%
AGAGCTTTGCTTATGGACAA+TGG + chr4_2:364982-365001 Msa0582200:intron 40.0%
GAGCTTTGCTTATGGACAAT+GGG + chr4_2:364983-365002 Msa0582200:intron 40.0%
TATGGACAATGGGATTCGAT+TGG + chr4_2:364993-365012 Msa0582200:intron 40.0%
ACCTTCTGATCATGATCAGA+CGG + chr4_2:365479-365498 Msa0582200:intron 40.0%
ATGTTCCATGCGAAAGAATC+TGG + chr4_2:365899-365918 Msa0582200:CDS 40.0%
CAGCTTGAAATACTTGACAC+TGG + chr4_2:366074-366093 Msa0582200:CDS 40.0%
CTTGAAATACTTGACACTGG+TGG + chr4_2:366077-366096 Msa0582200:CDS 40.0%
ATTACCTGTGCAAGTACTTC+AGG + chr4_2:366110-366129 Msa0582200:CDS 40.0%
! CGTGCTTTTCCATATATAGG+AGG + chr4_2:366433-366452 Msa0582200:intron 40.0%
GCATACCCCTCACATTTAAT+TGG - chr4_2:366691-366710 None:intergenic 40.0%
ATGCAGAAAATGACAGGATG+AGG + chr4_2:366723-366742 Msa0582200:CDS 40.0%
CCATCCAAATCAACATTGTG+AGG - chr4_2:366761-366780 None:intergenic 40.0%
!! CCTCACAATGTTGATTTGGA+TGG + chr4_2:366758-366777 Msa0582200:CDS 40.0%
TTACCCTCTGTTGGAGAATT+TGG + chr4_2:366809-366828 Msa0582200:CDS 40.0%
CTTCCAAATTCTCCAACAGA+GGG - chr4_2:366815-366834 None:intergenic 40.0%
GTGAGTCAAATGGTTCATCT+AGG + chr4_2:366858-366877 Msa0582200:CDS 40.0%
! TCAAATGGTTCATCTAGGAC+TGG + chr4_2:366863-366882 Msa0582200:CDS 40.0%
AATGTCACCTCCACATCTAT+TGG + chr4_2:367012-367031 Msa0582200:CDS 40.0%
TTTCCCAGATACGTATAGCA+AGG + chr4_2:367113-367132 Msa0582200:CDS 40.0%
CAAGAGTTGCAGCAAATATC+GGG + chr4_2:367199-367218 Msa0582200:CDS 40.0%
! CTTTTCAAAGAGTGGCACAA+TGG - chr4_2:367380-367399 None:intergenic 40.0%
TTCACATCTTGGATACGCAA+AGG - chr4_2:367616-367635 None:intergenic 40.0%
TTGCGTATCCAAGATGTGAA+AGG + chr4_2:367616-367635 Msa0582200:CDS 40.0%
TTGCATAGACTGAATACAGG+GGG - chr4_2:367713-367732 None:intergenic 40.0%
GTTGCATAGACTGAATACAG+GGG - chr4_2:367714-367733 None:intergenic 40.0%
CAGTTGCATAGACTGAATAC+AGG - chr4_2:367716-367735 None:intergenic 40.0%
TCAGAATCTTTGCAAGTTCC+TGG + chr4_2:367905-367924 Msa0582200:intron 40.0%
TGCAGTAACATTTAGCCGTA+TGG + chr4_2:368288-368307 Msa0582200:intron 40.0%
CCATTATAAGTTTCCCCTCA+GGG - chr4_2:368315-368334 None:intergenic 40.0%
CCTGAGGGGAAACTTATAAT+GGG + chr4_2:368313-368332 Msa0582200:CDS 40.0%
CTGAGGGGAAACTTATAATG+GGG + chr4_2:368314-368333 Msa0582200:CDS 40.0%
! GGAAACTTATAATGGGGTAC+AGG + chr4_2:368320-368339 Msa0582200:CDS 40.0%
! ACTTATAATGGGGTACAGGA+AGG + chr4_2:368324-368343 Msa0582200:CDS 40.0%
TTTCCGTCTAATATGCCCAA+TGG + chr4_2:368446-368465 Msa0582200:CDS 40.0%
GAACCATTGGGCATATTAGA+CGG - chr4_2:368452-368471 None:intergenic 40.0%
!!! AACCCTTTTGAGACTGAAGA+AGG - chr4_2:368541-368560 None:intergenic 40.0%
! ACTTTCTAGAGAGCGCATTT+AGG - chr4_2:368577-368596 None:intergenic 40.0%
! TAAATGCGCTCTCTAGAAAG+TGG + chr4_2:368576-368595 Msa0582200:CDS 40.0%
TCTAGAAAGTGGAACTCAGT+TGG + chr4_2:368587-368606 Msa0582200:CDS 40.0%
ATGTAGAAATGCCTGAAAGC+AGG + chr4_2:368630-368649 Msa0582200:CDS 40.0%
! ACATCTCTTTTCCTGCTTTC+AGG - chr4_2:368644-368663 None:intergenic 40.0%
ACTGGAGCTGAAACTTACTT+GGG + chr4_2:368757-368776 Msa0582200:CDS 40.0%
ACAACACTTGGCTTAACTTC+TGG - chr4_2:368812-368831 None:intergenic 40.0%
TACATGCATGCATGATAGAG+AGG + chr4_2:368924-368943 Msa0582200:intron 40.0%
ACATGCATGCATGATAGAGA+GGG + chr4_2:368925-368944 Msa0582200:intron 40.0%
ATAGAGAGGGGCGAAAATTA+TGG + chr4_2:368938-368957 Msa0582200:intron 40.0%
! TATCCAAAGCTTTTCAGTCC+TGG + chr4_2:369039-369058 Msa0582200:intron 40.0%
AAGTTAATCACTGCTACGTG+TGG - chr4_2:369198-369217 None:intergenic 40.0%
ACGGTTACCGGAGAGAAAAT+GGG - chr4_2:363748-363767 None:intergenic 45.0%
AACGGTTACCGGAGAGAAAA+TGG - chr4_2:363749-363768 None:intergenic 45.0%
GAACGGAGGAGAAGAAGTTA+GGG - chr4_2:363783-363802 None:intergenic 45.0%
TGAACGGAGGAGAAGAAGTT+AGG - chr4_2:363784-363803 None:intergenic 45.0%
AATCCAAAACCACCGCAACT+CGG + chr4_2:363836-363855 Msa0582200:five_prime_UTR 45.0%
! CGTTGGTTATGGAGATAAGG+CGG - chr4_2:363877-363896 None:intergenic 45.0%
CGCCTTATCTCCATAACCAA+CGG + chr4_2:363875-363894 Msa0582200:five_prime_UTR 45.0%
! CACCGTTGGTTATGGAGATA+AGG - chr4_2:363880-363899 None:intergenic 45.0%
GGAACTTTCCCTCAAACTTC+TGG + chr4_2:363903-363922 Msa0582200:five_prime_UTR 45.0%
TAGCGTCACCAGAAGTTTGA+GGG - chr4_2:363914-363933 None:intergenic 45.0%
ACATAGATCGGCGAATTCAC+CGG - chr4_2:364141-364160 None:intergenic 45.0%
GCCGATCTATGTGATAAGTG+CGG + chr4_2:364149-364168 Msa0582200:CDS 45.0%
CCCGCACTTATCACATAGAT+CGG - chr4_2:364153-364172 None:intergenic 45.0%
CCGATCTATGTGATAAGTGC+GGG + chr4_2:364150-364169 Msa0582200:CDS 45.0%
! TGCGGTTGTTGGTAAGATTG+TGG + chr4_2:364634-364653 Msa0582200:intron 45.0%
! TGTTGGTAAGATTGTGGCTG+CGG + chr4_2:364640-364659 Msa0582200:intron 45.0%
!! ACCACTAGCTCTGTTGACTT+AGG - chr4_2:364879-364898 None:intergenic 45.0%
!! ATGGACTAGCCCATCGAAAT+TGG - chr4_2:364960-364979 None:intergenic 45.0%
TCCATCCAGAGCTTTGCTTA+TGG + chr4_2:364975-364994 Msa0582200:intron 45.0%
!! TCCATAAGCAAAGCTCTGGA+TGG - chr4_2:364979-364998 None:intergenic 45.0%
ATTGGACCCCTCAGATTAGT+CGG + chr4_2:365011-365030 Msa0582200:intron 45.0%
CTAAGACCGACTAATCTGAG+GGG - chr4_2:365020-365039 None:intergenic 45.0%
CCTAAGACCGACTAATCTGA+GGG - chr4_2:365021-365040 None:intergenic 45.0%
! ACATTTTCTGTGGTTACCCC+AGG + chr4_2:365105-365124 Msa0582200:intron 45.0%
ACACTTAAAGAGGAGATCCC+AGG - chr4_2:365136-365155 None:intergenic 45.0%
ACCGTCTGATCATGATCAGA+AGG - chr4_2:365483-365502 None:intergenic 45.0%
AGTCACTAGTCCGTGATTGT+AGG + chr4_2:365598-365617 Msa0582200:intron 45.0%
GTCACTAGTCCGTGATTGTA+GGG + chr4_2:365599-365618 Msa0582200:intron 45.0%
TCCGTGATTGTAGGGAATCT+CGG + chr4_2:365607-365626 Msa0582200:intron 45.0%
ACCGAGATTCCCTACAATCA+CGG - chr4_2:365611-365630 None:intergenic 45.0%
AACTATGTCACAAGGCTCGT+GGG - chr4_2:365641-365660 None:intergenic 45.0%
AAACTATGTCACAAGGCTCG+TGG - chr4_2:365642-365661 None:intergenic 45.0%
TCCATGCGAAAGAATCTGGT+TGG + chr4_2:365903-365922 Msa0582200:CDS 45.0%
TCCAACCAGATTCTTTCGCA+TGG - chr4_2:365907-365926 None:intergenic 45.0%
! TGGAGAGAGTGTACTTCATG+TGG + chr4_2:365923-365942 Msa0582200:CDS 45.0%
AGAGTGTACTTCATGTGGCA+AGG + chr4_2:365928-365947 Msa0582200:CDS 45.0%
TTGAAGCAACACATCCGCAA+TGG - chr4_2:366049-366068 None:intergenic 45.0%
! AAGTCCTGAAGTACTTGCAC+AGG - chr4_2:366117-366136 None:intergenic 45.0%
ACAAGGTGAAGTGAGCTTAC+AGG - chr4_2:366143-366162 None:intergenic 45.0%
! AATGTGAGGGGTATGCAAGT+TGG + chr4_2:366695-366714 Msa0582200:CDS 45.0%
! ATGTGAGGGGTATGCAAGTT+GGG + chr4_2:366696-366715 Msa0582200:CDS 45.0%
AAAATGACAGGATGAGGTGC+TGG + chr4_2:366729-366748 Msa0582200:CDS 45.0%
CCAACAGAGGGTAAAACTTC+TGG - chr4_2:366803-366822 None:intergenic 45.0%
! CCAGAAGTTTTACCCTCTGT+TGG + chr4_2:366800-366819 Msa0582200:CDS 45.0%
GCTTCCAAATTCTCCAACAG+AGG - chr4_2:366816-366835 None:intergenic 45.0%
ATTTGGCAAAGGAGCGGTAA+GGG - chr4_2:366951-366970 None:intergenic 45.0%
AAAGGGATTTGGCAAAGGAG+CGG - chr4_2:366957-366976 None:intergenic 45.0%
GATCTAGACGCCAATAGATG+TGG - chr4_2:367025-367044 None:intergenic 45.0%
TCTAAGCCTGGAGTTAGAGT+TGG - chr4_2:367076-367095 None:intergenic 45.0%
ACTCTAACTCCAGGCTTAGA+AGG + chr4_2:367076-367095 Msa0582200:CDS 45.0%
CTTAGAAGGAAACACAGGCA+TGG + chr4_2:367090-367109 Msa0582200:CDS 45.0%
! AGGCCTTGCTATACGTATCT+GGG - chr4_2:367119-367138 None:intergenic 45.0%
ATCAGTTGCTTCCGCGATAT+TGG + chr4_2:367161-367180 Msa0582200:CDS 45.0%
GTAATTCTGGGCCAATATCG+CGG - chr4_2:367175-367194 None:intergenic 45.0%
TTCAAAGAGTGGCACAATGG+TGG - chr4_2:367377-367396 None:intergenic 45.0%
ATGCTTAGTGCAAGTGATGC+TGG + chr4_2:367400-367419 Msa0582200:CDS 45.0%
CATCTTGGATACGCAAAGGA+AGG - chr4_2:367612-367631 None:intergenic 45.0%
CCCTGAGGGGAAACTTATAA+TGG + chr4_2:368312-368331 Msa0582200:CDS 45.0%
CCCATTATAAGTTTCCCCTC+AGG - chr4_2:368316-368335 None:intergenic 45.0%
TGGCCTTCTTCAGTCTCAAA+AGG + chr4_2:368535-368554 Msa0582200:CDS 45.0%
GGCCTTCTTCAGTCTCAAAA+GGG + chr4_2:368536-368555 Msa0582200:CDS 45.0%
! TCTAGAGAGCGCATTTAGGT+GGG - chr4_2:368573-368592 None:intergenic 45.0%
! TTCTAGAGAGCGCATTTAGG+TGG - chr4_2:368574-368593 None:intergenic 45.0%
!! GAGGTTGCTTATTGATAGCG+AGG + chr4_2:368730-368749 Msa0582200:CDS 45.0%
!! TATTGATAGCGAGGATGCAC+TGG + chr4_2:368739-368758 Msa0582200:CDS 45.0%
CACTGGAGCTGAAACTTACT+TGG + chr4_2:368756-368775 Msa0582200:CDS 45.0%
GCTGAAACTTACTTGGGAAG+AGG + chr4_2:368763-368782 Msa0582200:CDS 45.0%
ACACTTGGCTTAACTTCTGG+AGG - chr4_2:368809-368828 None:intergenic 45.0%
TCCTCGATCATGACAACACT+TGG - chr4_2:368824-368843 None:intergenic 45.0%
CATGCATGCATGATAGAGAG+GGG + chr4_2:368926-368945 Msa0582200:intron 45.0%
TCACCAGGACTGAAAAGCTT+TGG - chr4_2:369045-369064 None:intergenic 45.0%
GACATGGACTTTACCTGCAT+TGG + chr4_2:369097-369116 Msa0582200:intron 45.0%
! GCGTATTGATAGACCAATGC+AGG - chr4_2:369113-369132 None:intergenic 45.0%
ACGCATGCACTAACCAGTAT+TGG + chr4_2:369129-369148 Msa0582200:intron 45.0%
CTCTTCTTTCCAAACACAGG+AGG - chr4_2:369316-369335 None:intergenic 45.0%
!!! AATTTATGATTATTTTTTTT+TGG + chr4_2:366254-366273 Msa0582200:intron 5.0%
!! ATAAAAATAACTATAATAAT+GGG - chr4_2:367504-367523 None:intergenic 5.0%
!! AATAAAAATAACTATAATAA+TGG - chr4_2:367505-367524 None:intergenic 5.0%
GGATGAGAGAGTTTGAACGG+AGG - chr4_2:363797-363816 None:intergenic 50.0%
TTATGGAGATAAGGCGGTGG+TGG - chr4_2:363871-363890 None:intergenic 50.0%
TGGTTATGGAGATAAGGCGG+TGG - chr4_2:363874-363893 None:intergenic 50.0%
TCTCCATAACCAACGGTGAC+CGG + chr4_2:363882-363901 Msa0582200:five_prime_UTR 50.0%
CTAGCGTCACCAGAAGTTTG+AGG - chr4_2:363915-363934 None:intergenic 50.0%
!! GGTGACGCTAGCTTTGATTC+CGG + chr4_2:363924-363943 Msa0582200:five_prime_UTR 50.0%
! GTGGAACCTCTACGTCGATT+CGG + chr4_2:364090-364109 Msa0582200:CDS 50.0%
GGGTCAAAACGACAAAACGG+TGG - chr4_2:364533-364552 None:intergenic 50.0%
GCCTAAGTCAACAGAGCTAG+TGG + chr4_2:364875-364894 Msa0582200:intron 50.0%
AAAGCACACTCCTATGCCTC+AGG - chr4_2:364907-364926 None:intergenic 50.0%
AGCCCATCGAAATTGGCACT+GGG - chr4_2:364953-364972 None:intergenic 50.0%
TAGCCCATCGAAATTGGCAC+TGG - chr4_2:364954-364973 None:intergenic 50.0%
! CCCTCAGATTAGTCGGTCTT+AGG + chr4_2:365018-365037 Msa0582200:intron 50.0%
GCCTAAGACCGACTAATCTG+AGG - chr4_2:365022-365041 None:intergenic 50.0%
! CAGATTAGTCGGTCTTAGGC+CGG + chr4_2:365022-365041 Msa0582200:intron 50.0%
TTTCTGTGGTTACCCCAGGT+CGG + chr4_2:365109-365128 Msa0582200:intron 50.0%
TGCATGCAATCAGTGACTGC+AGG - chr4_2:365440-365459 None:intergenic 50.0%
TATCTGCAGCGTCTCCATTG+CGG + chr4_2:366032-366051 Msa0582200:intron 50.0%
TAGCCAGAGATATGCACTGC+CGG - chr4_2:366667-366686 None:intergenic 50.0%
GATTTGGCAAAGGAGCGGTA+AGG - chr4_2:366952-366971 None:intergenic 50.0%
CTAGACGCCAATAGATGTGG+AGG - chr4_2:367022-367041 None:intergenic 50.0%
! AGAGTTGGCCTAGGAGGTTT+AGG - chr4_2:367061-367080 None:intergenic 50.0%
CCTGTGTTTCCTTCTAAGCC+TGG - chr4_2:367088-367107 None:intergenic 50.0%
CCAGGCTTAGAAGGAAACAC+AGG + chr4_2:367085-367104 Msa0582200:CDS 50.0%
! GAGGCCTTGCTATACGTATC+TGG - chr4_2:367120-367139 None:intergenic 50.0%
GCAAGTGATGCTGGTCGAAT+TGG + chr4_2:367409-367428 Msa0582200:CDS 50.0%
!! CCTCAGGTTGAGAGATAGGA+GGG - chr4_2:367588-367607 None:intergenic 50.0%
CCTCCTATCTCTCAACCTGA+GGG + chr4_2:367586-367605 Msa0582200:CDS 50.0%
CAGTCTATGCAACTGCAAGC+TGG + chr4_2:367721-367740 Msa0582200:CDS 50.0%
ATTTAGCCGTATGGACCCTG+AGG + chr4_2:368297-368316 Msa0582200:CDS 50.0%
TTTAGCCGTATGGACCCTGA+GGG + chr4_2:368298-368317 Msa0582200:CDS 50.0%
!! GAACTCAGTTGGTGCTGACA+TGG + chr4_2:368598-368617 Msa0582200:CDS 50.0%
!! CAGTTGGTGCTGACATGGAT+TGG + chr4_2:368603-368622 Msa0582200:CDS 50.0%
TTCTTCTCAGGAACCAGCAC+AGG - chr4_2:368680-368699 None:intergenic 50.0%
ACTTACTTGGGAAGAGGCTC+AGG + chr4_2:368769-368788 Msa0582200:CDS 50.0%
! CTTGGCTTAACTTCTGGAGG+TGG - chr4_2:368806-368825 None:intergenic 50.0%
! GCCAAGTGTTGTCATGATCG+AGG + chr4_2:368820-368839 Msa0582200:CDS 50.0%
ATTCAGGAGCCTCCTGTGTT+TGG + chr4_2:369304-369323 Msa0582200:intron 50.0%
CGGAGGAGAAGAAGTTAGGG+AGG - chr4_2:363780-363799 None:intergenic 55.0%
! AGATAAGGCGGTGGTGGTGA+CGG - chr4_2:363865-363884 None:intergenic 55.0%
! GTTCCGGTCACCGTTGGTTA+TGG - chr4_2:363888-363907 None:intergenic 55.0%
!! GAACCTCTACGTCGATTCGG+TGG + chr4_2:364093-364112 Msa0582200:CDS 55.0%
! GAGCTAGTGGTGATGACCTG+AGG + chr4_2:364888-364907 Msa0582200:intron 55.0%
! GTGGTGATGACCTGAGGCAT+AGG + chr4_2:364894-364913 Msa0582200:intron 55.0%
TCCCCCAGTGCCAATTTCGA+TGG + chr4_2:364947-364966 Msa0582200:intron 55.0%
! CCCATCGAAATTGGCACTGG+GGG - chr4_2:364951-364970 None:intergenic 55.0%
CCCCCAGTGCCAATTTCGAT+GGG + chr4_2:364948-364967 Msa0582200:intron 55.0%
GCCCATCGAAATTGGCACTG+GGG - chr4_2:364952-364971 None:intergenic 55.0%
TCACAAGGCTCGTGGGTAGA+AGG - chr4_2:365634-365653 None:intergenic 55.0%
AGCCAGAGATATGCACTGCC+GGG - chr4_2:366666-366685 None:intergenic 55.0%
! GGAGTTAGAGTTGGCCTAGG+AGG - chr4_2:367067-367086 None:intergenic 55.0%
! CCTGGAGTTAGAGTTGGCCT+AGG - chr4_2:367070-367089 None:intergenic 55.0%
CCTAGGCCAACTCTAACTCC+AGG + chr4_2:367067-367086 Msa0582200:CDS 55.0%
CTGATTCCTTCCCCGTCCTT+CGG - chr4_2:367146-367165 None:intergenic 55.0%
TGCTGGTCGAATTGGTCGCT+TGG + chr4_2:367417-367436 Msa0582200:CDS 55.0%
CCCTCCTATCTCTCAACCTG+AGG + chr4_2:367585-367604 Msa0582200:CDS 55.0%
!! CCCTCAGGTTGAGAGATAGG+AGG - chr4_2:367589-367608 None:intergenic 55.0%
!! AGGCCCTCAGGTTGAGAGAT+AGG - chr4_2:367592-367611 None:intergenic 55.0%
ATACGCAAAGGAAGGCCCTC+AGG - chr4_2:367604-367623 None:intergenic 55.0%
CAACTGCAAGCTGGCGATAC+TGG + chr4_2:367730-367749 Msa0582200:CDS 55.0%
TTAGCCGTATGGACCCTGAG+GGG + chr4_2:368299-368318 Msa0582200:CDS 55.0%
GTTTCCCCTCAGGGTCCATA+CGG - chr4_2:368306-368325 None:intergenic 55.0%
TTCTCAGGAACCAGCACAGG+TGG - chr4_2:368677-368696 None:intergenic 55.0%
GGGAAAGTTCCGGTCACCGT+TGG - chr4_2:363894-363913 None:intergenic 60.0%
!! CCTCTACGTCGATTCGGTGG+CGG + chr4_2:364096-364115 Msa0582200:CDS 60.0%
!! ACGTCGATTCGGTGGCGGAA+AGG + chr4_2:364101-364120 Msa0582200:CDS 60.0%
!! CGATTCGGTGGCGGAAAGGT+TGG + chr4_2:364105-364124 Msa0582200:CDS 60.0%
TGCCCGGCAGTGCATATCTC+TGG + chr4_2:366661-366680 Msa0582200:CDS 60.0%
ATAGCAAGGCCTCCTGCCGA+AGG + chr4_2:367127-367146 Msa0582200:CDS 60.0%
! CGGCCGAGTTGCGGTGGTTT+TGG - chr4_2:363842-363861 None:intergenic 65.0%
!! TAAGGCGGTGGTGGTGACGG+CGG - chr4_2:363862-363881 None:intergenic 65.0%
CCGCCACCGAATCGACGTAG+AGG - chr4_2:364099-364118 None:intergenic 65.0%
TGGTTACCCCAGGTCGGACC+TGG + chr4_2:365115-365134 Msa0582200:intron 65.0%
GGTTACCCCAGGTCGGACCT+GGG + chr4_2:365116-365135 Msa0582200:intron 65.0%
GAGATCCCAGGTCCGACCTG+GGG - chr4_2:365124-365143 None:intergenic 65.0%
GGAGATCCCAGGTCCGACCT+GGG - chr4_2:365125-365144 None:intergenic 65.0%
AGGAGATCCCAGGTCCGACC+TGG - chr4_2:365126-365145 None:intergenic 65.0%
CAAGGCCTCCTGCCGAAGGA+CGG + chr4_2:367131-367150 Msa0582200:CDS 65.0%
AAGGCCTCCTGCCGAAGGAC+GGG + chr4_2:367132-367151 Msa0582200:CDS 65.0%
TTCCTTCCCCGTCCTTCGGC+AGG - chr4_2:367142-367161 None:intergenic 65.0%
!! TGGTGACGGCGGCCGAGTTG+CGG - chr4_2:363851-363870 None:intergenic 70.0%
AGGCCTCCTGCCGAAGGACG+GGG + chr4_2:367133-367152 Msa0582200:CDS 70.0%
CTTCCCCGTCCTTCGGCAGG+AGG - chr4_2:367139-367158 None:intergenic 70.0%
CTCCTGCCGAAGGACGGGGA+AGG + chr4_2:367137-367156 Msa0582200:CDS 70.0%
TGACGGCGGCCGAGTTGCGG+TGG - chr4_2:363848-363867 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 363672 369368 363672 ID=Msa0582200;Name=Msa0582200
chr4_2 mRNA 363672 369368 363672 ID=Msa0582200-mRNA-1;Parent=Msa0582200;Name=Msa0582200-mRNA-1;_AED=0.07;_eAED=0.07;_QI=295|1|1|1|0.88|0.9|10|5|581
chr4_2 exon 363672 363945 363672 ID=Msa0582200-mRNA-1:exon:62;Parent=Msa0582200-mRNA-1
chr4_2 exon 364038 364171 364038 ID=Msa0582200-mRNA-1:exon:63;Parent=Msa0582200-mRNA-1
chr4_2 exon 365868 365949 365868 ID=Msa0582200-mRNA-1:exon:64;Parent=Msa0582200-mRNA-1
chr4_2 exon 366041 366142 366041 ID=Msa0582200-mRNA-1:exon:65;Parent=Msa0582200-mRNA-1
chr4_2 exon 366605 367224 366605 ID=Msa0582200-mRNA-1:exon:66;Parent=Msa0582200-mRNA-1
chr4_2 exon 367366 367462 367366 ID=Msa0582200-mRNA-1:exon:67;Parent=Msa0582200-mRNA-1
chr4_2 exon 367577 367751 367577 ID=Msa0582200-mRNA-1:exon:68;Parent=Msa0582200-mRNA-1
chr4_2 exon 368293 368369 368293 ID=Msa0582200-mRNA-1:exon:69;Parent=Msa0582200-mRNA-1
chr4_2 exon 368440 368865 368440 ID=Msa0582200-mRNA-1:exon:70;Parent=Msa0582200-mRNA-1
chr4_2 exon 369310 369368 369310 ID=Msa0582200-mRNA-1:exon:71;Parent=Msa0582200-mRNA-1
chr4_2 five_prime_UTR 363672 363945 363672 ID=Msa0582200-mRNA-1:five_prime_utr;Parent=Msa0582200-mRNA-1
chr4_2 five_prime_UTR 364038 364058 364038 ID=Msa0582200-mRNA-1:five_prime_utr;Parent=Msa0582200-mRNA-1
chr4_2 CDS 364059 364171 364059 ID=Msa0582200-mRNA-1:cds;Parent=Msa0582200-mRNA-1
chr4_2 CDS 365868 365949 365868 ID=Msa0582200-mRNA-1:cds;Parent=Msa0582200-mRNA-1
chr4_2 CDS 366041 366142 366041 ID=Msa0582200-mRNA-1:cds;Parent=Msa0582200-mRNA-1
chr4_2 CDS 366605 367224 366605 ID=Msa0582200-mRNA-1:cds;Parent=Msa0582200-mRNA-1
chr4_2 CDS 367366 367462 367366 ID=Msa0582200-mRNA-1:cds;Parent=Msa0582200-mRNA-1
chr4_2 CDS 367577 367751 367577 ID=Msa0582200-mRNA-1:cds;Parent=Msa0582200-mRNA-1
chr4_2 CDS 368293 368369 368293 ID=Msa0582200-mRNA-1:cds;Parent=Msa0582200-mRNA-1
chr4_2 CDS 368440 368865 368440 ID=Msa0582200-mRNA-1:cds;Parent=Msa0582200-mRNA-1
chr4_2 CDS 369310 369363 369310 ID=Msa0582200-mRNA-1:cds;Parent=Msa0582200-mRNA-1
chr4_2 three_prime_UTR 369364 369368 369364 ID=Msa0582200-mRNA-1:three_prime_utr;Parent=Msa0582200-mRNA-1
Gene Sequence

>Msa0582200

ATGGAGTCAAAGTGTTGCATGAACGTTGTTTGTGGAACCTCTACGTCGATTCGGTGGCGGAAAGGTTGGATTCTTCGATCCGGTGAATTCGCCGATCTATGTGATAAGTGCGGTTCTGCTTATGAGCAATCAGCGTTTTGCGATATGTTCCATGCGAAAGAATCTGGTTGGAGAGAGTGTACTTCATGTGGCAAGCGTCTCCATTGCGGATGTGTTGCTTCAAAGTCTCAGCTTGAAATACTTGACACTGGTGGTGTAAGCTGTATTACCTGTGCAAGTACTTCAGGACTTCAACCTATTGCTAGTAATGAAATCCCTAATGAATCTGGAACAGCAAAAGTAAATAATGTTGTTGCCCGGCAGTGCATATCTCTGGCTAACCAATTAAATGTGAGGGGTATGCAAGTTGGGAATTATGCAGAAAATGACAGGATGAGGTGCTGGCTCAAACCTCACAATGTTGATTTGGATGGACCTTCTAGAGAAATCAAACCAGAAGTTTTACCCTCTGTTGGAGAATTTGGAAGCACTTTGATGTCACAATTTCATCGTGAGTCAAATGGTTCATCTAGGACTGGCAAAGCAGAGAATGACATGCAAGATATATATGAATCACTGGCACAGACAAATTTGAGTATGACCCTTACCGCTCCTTTGCCAAATCCCTTTCATAATGTCCTTGTTGATGAAAGGGAACAAAGCAAAATGTCACCTCCACATCTATTGGCGTCTAGATCTCGTCATCTTTTACCTAAACCTCCTAGGCCAACTCTAACTCCAGGCTTAGAAGGAAACACAGGCATGGTTTCCCAGATACGTATAGCAAGGCCTCCTGCCGAAGGACGGGGAAGGAATCAGTTGCTTCCGCGATATTGGCCCAGAATTACAGATCAAGAGTTGCAGCAAATATCGGGAGATTCAAATTCCACCATTGTGCCACTCTTTGAAAAGATGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTGGTTCTTCCAAAAGCATGTGCTGAAGCATATTTCCCTCCTATCTCTCAACCTGAGGGCCTTCCTTTGCGTATCCAAGATGTGAAAGGAAAAGAATGGATGTTTCAATTTAGATTTTGGCCAAATAATAATAGCAGGATGTATGTTTTAGAAGGGGTAACCCCCTGTATTCAGTCTATGCAACTGCAAGCTGGCGATACTGTAACATTTAGCCGTATGGACCCTGAGGGGAAACTTATAATGGGGTACAGGAAGGCAACAAATTCTGCTTCAGTACAGGAAACTTTTCCGTCTAATATGCCCAATGGTTCTCATTCAAGTGAAACTTCCTATTCTGGTGTTTATGAGAATATACCTATATTAAGTGGTTATTCTGGCCTTCTTCAGTCTCAAAAGGGTTGTTCAGAAACCCACCTAAATGCGCTCTCTAGAAAGTGGAACTCAGTTGGTGCTGACATGGATTGGCATAATGTAGAAATGCCTGAAAGCAGGAAAAGAGATGTGTTGTCTTTACCACCTGTGCTGGTTCCTGAGAAGAAAAGAACTCGAAATATTGGGTCAAAAAGCAAGAGGTTGCTTATTGATAGCGAGGATGCACTGGAGCTGAAACTTACTTGGGAAGAGGCTCAGGATTTACTTCGTCCACCTCCAGAAGTTAAGCCAAGTGTTGTCATGATCGAGGATCACTTATTTGAAGAGTATGAAGAGCCTCCTGTGTTTGGAAAGAAGAGTATATTTGTGGTACGATCTACTGGGTAA
Protein sequence

>Msa0582200

MESKCCMNVVCGTSTSIRWRKGWILRSGEFADLCDKCGSAYEQSAFCDMFHAKESGWRECTSCGKRLHCGCVASKSQLEILDTGGVSCITCASTSGLQPIASNEIPNESGTAKVNNVVARQCISLANQLNVRGMQVGNYAENDRMRCWLKPHNVDLDGPSREIKPEVLPSVGEFGSTLMSQFHRESNGSSRTGKAENDMQDIYESLAQTNLSMTLTAPLPNPFHNVLVDEREQSKMSPPHLLASRSRHLLPKPPRPTLTPGLEGNTGMVSQIRIARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWMFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGYRKATNSASVQETFPSNMPNGSHSSETSYSGVYENIPILSGYSGLLQSQKGCSETHLNALSRKWNSVGADMDWHNVEMPESRKRDVLSLPPVLVPEKKRTRNIGSKSKRLLIDSEDALELKLTWEEAQDLLRPPPEVKPSVVMIEDHLFEEYEEPPVFGKKSIFVVRSTG*