Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584790 | AES87959.1 | 77.679 | 112 | 17 | 2 | 85 | 188 | 6 | 117 | 2.46e-45 | 155 |
| Msa0584790 | AES87959.1 | 79.775 | 89 | 11 | 1 | 1 | 82 | 14 | 102 | 1.33e-32 | 123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584790 | G7JTJ2 | 77.679 | 112 | 17 | 2 | 85 | 188 | 6 | 117 | 1.18e-45 | 155 |
| Msa0584790 | G7JTJ2 | 79.775 | 89 | 11 | 1 | 1 | 82 | 14 | 102 | 6.34e-33 | 123 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0584790 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584790 | MtrunA17_Chr4g0019481 | 77.679 | 112 | 17 | 2 | 85 | 188 | 6 | 117 | 2.27e-49 | 155 |
| Msa0584790 | MtrunA17_Chr4g0019481 | 79.775 | 89 | 11 | 1 | 1 | 82 | 14 | 102 | 1.22e-36 | 123 |
| Msa0584790 | MtrunA17_Chr4g0019471 | 69.048 | 126 | 17 | 3 | 85 | 188 | 6 | 131 | 1.38e-44 | 144 |
| Msa0584790 | MtrunA17_Chr4g0019471 | 68.932 | 103 | 11 | 1 | 1 | 82 | 14 | 116 | 2.10e-34 | 118 |
| Msa0584790 | MtrunA17_Chr4g0019551 | 66.942 | 121 | 18 | 3 | 83 | 188 | 4 | 117 | 2.27e-41 | 135 |
| Msa0584790 | MtrunA17_Chr4g0019551 | 80.682 | 88 | 10 | 1 | 2 | 82 | 15 | 102 | 6.38e-31 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 28 sgRNAs with CRISPR-Local
Find 450 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGGTTCAGGCTGGTTATT+TGG | 0.175696 | 4_2:-4812166 | None:intergenic |
| TCTCATTCATCTGGTGTATA+AGG | 0.183369 | 4_2:-4820201 | None:intergenic |
| TCGGGTTCAGGCTGGTTATT+TGG | 0.220105 | 4_2:-4820021 | None:intergenic |
| CTCGATTCTAATATAAAATC+TGG | 0.312947 | 4_2:-4819982 | None:intergenic |
| CTAGATTCTAATATATAATC+TGG | 0.344499 | 4_2:-4812127 | None:intergenic |
| CTCATTCATCTGGTGTATAA+GGG | 0.358870 | 4_2:-4820200 | None:intergenic |
| TCAGGCTGGTTATTTGGTGG+TGG | 0.452210 | 4_2:-4812160 | None:intergenic |
| TCAGGCTGGTTATTTGGTGG+TGG | 0.474246 | 4_2:-4820015 | None:intergenic |
| TTGAGGTCGAAAGCTCGAAC+AGG | 0.496472 | 4_2:-4820174 | None:intergenic |
| GGAGGCTGGTTCAAGTCAAA+TGG | 0.506887 | 4_2:-4812298 | None:intergenic |
| GGAGGCTGGTTCAAGTCAAA+TGG | 0.506887 | 4_2:-4820153 | None:intergenic |
| GGTTCAGGCTGGTTATTTGG+TGG | 0.509510 | 4_2:-4812163 | None:intergenic |
| CGAAAGCTTGAACAGGAGGC+TGG | 0.520977 | 4_2:-4812312 | None:intergenic |
| AAGTCAAATGGTTGCACATG+TGG | 0.522527 | 4_2:-4812286 | None:intergenic |
| AAGTCAAATGGTTGCACATG+TGG | 0.522527 | 4_2:-4820141 | None:intergenic |
| GGTTCAGGCTGGTTATTTGG+TGG | 0.524862 | 4_2:-4820018 | None:intergenic |
| CGAAAGCTCGAACAGGAGGC+TGG | 0.528604 | 4_2:-4820167 | None:intergenic |
| AATGGTTGCACATGTGGAGG+TGG | 0.555990 | 4_2:-4812280 | None:intergenic |
| AATGGTTGCACATGTGGAGG+TGG | 0.555990 | 4_2:-4820135 | None:intergenic |
| TTGTGTCACATTCACTGCAT+AGG | 0.586276 | 4_2:-4819909 | None:intergenic |
| ACTGCTAAAGCTTCTCGAGA+TGG | 0.596385 | 4_2:-4812082 | None:intergenic |
| ACTGCTAAAGCTTCTCGAGA+TGG | 0.596385 | 4_2:-4819937 | None:intergenic |
| CTGGTGTATAAGGGAGATTG+AGG | 0.611261 | 4_2:-4820191 | None:intergenic |
| ATATTAGAATCGAGTAAACA+AGG | 0.624706 | 4_2:+4819991 | Msa0584790:CDS |
| AGGTCGAAAGCTCGAACAGG+AGG | 0.629084 | 4_2:-4820171 | None:intergenic |
| ATATTAGAATCTAGTAAACA+AGG | 0.648272 | 4_2:+4812136 | Msa0584790:CDS |
| TCAAATGGTTGCACATGTGG+AGG | 0.671560 | 4_2:-4812283 | None:intergenic |
| TCAAATGGTTGCACATGTGG+AGG | 0.671560 | 4_2:-4820138 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATTTTTTTTTTTTTTA+AGG | + | chr4_2:4818020-4818039 | Msa0584790:intron | 0.0% |
| !! | AAAAACTATTATTAATAAAG+TGG | + | chr4_2:4812392-4812411 | Msa0584790:intron | 10.0% |
| !!! | TTTTTTTATTTTGATCTATA+AGG | - | chr4_2:4813070-4813089 | None:intergenic | 10.0% |
| !! | ATTAAAAAGTAAAGAATAAA+AGG | + | chr4_2:4815679-4815698 | Msa0584790:intron | 10.0% |
| !!! | GCATTAAATTTTTTTTTTTA+AGG | + | chr4_2:4818052-4818071 | Msa0584790:intron | 10.0% |
| !! | TTAATGATTATTTATTTAGT+AGG | - | chr4_2:4818356-4818375 | None:intergenic | 10.0% |
| !! | AAAGTTATTTATAAAATGAA+TGG | + | chr4_2:4818682-4818701 | Msa0584790:intron | 10.0% |
| !! | AAGTTATTTATAAAATGAAT+GGG | + | chr4_2:4818683-4818702 | Msa0584790:intron | 10.0% |
| !! | TTTACTAAAAAAAAATTGTA+TGG | - | chr4_2:4819039-4819058 | None:intergenic | 10.0% |
| !!! | TACAATTTTTTTTTAGTAAA+CGG | + | chr4_2:4819039-4819058 | Msa0584790:intron | 10.0% |
| !!! | AATTTTAAAAAAATGTTAGA+TGG | + | chr4_2:4819286-4819305 | Msa0584790:intron | 10.0% |
| !!! | CTTTTTTAAAGTTTTTTTAT+AGG | - | chr4_2:4819603-4819622 | None:intergenic | 10.0% |
| !!! | TAATCTTTTATTTTCAATTT+TGG | + | chr4_2:4819630-4819649 | Msa0584790:intron | 10.0% |
| !!! | AATCTTTTATTTTCAATTTT+GGG | + | chr4_2:4819631-4819650 | Msa0584790:intron | 10.0% |
| !! | AAATAATATAAGATACATTA+TGG | - | chr4_2:4819743-4819762 | None:intergenic | 10.0% |
| !! | TATTATCAAGAATAAGATAT+TGG | + | chr4_2:4812438-4812457 | Msa0584790:intron | 15.0% |
| !! | AAACAACAATTATAAATGAT+TGG | - | chr4_2:4812472-4812491 | None:intergenic | 15.0% |
| !!! | GATTATAATTTGTTGTTTAT+AGG | + | chr4_2:4812658-4812677 | Msa0584790:intron | 15.0% |
| !!! | ATCAAAATAAAAAAAGTGTT+CGG | + | chr4_2:4813075-4813094 | Msa0584790:intron | 15.0% |
| !! | TAAAGTTATAAATCGAATTA+GGG | + | chr4_2:4813365-4813384 | Msa0584790:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGTTTTGG+GGG | - | chr4_2:4813599-4813618 | None:intergenic | 15.0% |
| !!! | GTTTTTTTTTTTTTGTTTTG+GGG | - | chr4_2:4813600-4813619 | None:intergenic | 15.0% |
| !!! | GGTTTTTTTTTTTTTGTTTT+GGG | - | chr4_2:4813601-4813620 | None:intergenic | 15.0% |
| !! | TACTAAAGTTATAAATCAAA+TGG | + | chr4_2:4813860-4813879 | Msa0584790:intron | 15.0% |
| !! | TAAAAACAGCTATTAAAAAA+TGG | - | chr4_2:4814992-4815011 | None:intergenic | 15.0% |
| !!! | TTGTTTCTTATAAATAAGAT+CGG | - | chr4_2:4815534-4815553 | None:intergenic | 15.0% |
| !!! | GTCAATTGTTTTTTATAAAT+AGG | + | chr4_2:4815636-4815655 | Msa0584790:intron | 15.0% |
| !!! | AAATAATTATTTTTGAAGCA+AGG | + | chr4_2:4816130-4816149 | Msa0584790:intron | 15.0% |
| !!! | AATAATTATTTTTGAAGCAA+GGG | + | chr4_2:4816131-4816150 | Msa0584790:intron | 15.0% |
| !! | AATAAAAATTTCTCTTTCAA+TGG | - | chr4_2:4816967-4816986 | None:intergenic | 15.0% |
| !!! | TAGATTTATGTTTTTTTCTT+AGG | + | chr4_2:4817537-4817556 | Msa0584790:intron | 15.0% |
| !!! | TCTTAGAAGTTTTTTTTTAA+AGG | + | chr4_2:4817573-4817592 | Msa0584790:intron | 15.0% |
| !! | TCAATTGAGATTATAATAAT+CGG | + | chr4_2:4817877-4817896 | Msa0584790:intron | 15.0% |
| !! | ATAGAAAAATTGTATACATA+TGG | - | chr4_2:4817983-4818002 | None:intergenic | 15.0% |
| !!! | TTTCACTCTTTTTAAAAAAA+AGG | - | chr4_2:4818185-4818204 | None:intergenic | 15.0% |
| !! | AAAAATTGTATACATATGTA+GGG | - | chr4_2:4818279-4818298 | None:intergenic | 15.0% |
| !!! | TTTTTATTTTTTACCTCTTT+TGG | - | chr4_2:4818431-4818450 | None:intergenic | 15.0% |
| !!! | AAATAGTCATACTTTTTTTT+AGG | + | chr4_2:4818448-4818467 | Msa0584790:intron | 15.0% |
| !!! | AATAGTCATACTTTTTTTTA+GGG | + | chr4_2:4818449-4818468 | Msa0584790:intron | 15.0% |
| !! | AGTTATTTATAAAATGAATG+GGG | + | chr4_2:4818684-4818703 | Msa0584790:intron | 15.0% |
| !! | CATTGTTTATAAAATTGTAA+AGG | - | chr4_2:4818946-4818965 | None:intergenic | 15.0% |
| !! | TCTAAGTTAAATTTGAATAT+TGG | - | chr4_2:4819484-4819503 | None:intergenic | 15.0% |
| !! | ATTATGGAAATAATTATGTT+CGG | + | chr4_2:4819657-4819676 | Msa0584790:intron | 15.0% |
| !! | AAAATGGTAACAATATATAT+AGG | - | chr4_2:4819818-4819837 | None:intergenic | 15.0% |
| !! | CTAGATTCTAATATATAATC+TGG | - | chr4_2:4812130-4812149 | None:intergenic | 20.0% |
| !! | ATATTAGAATCTAGTAAACA+AGG | + | chr4_2:4812136-4812155 | Msa0584790:CDS | 20.0% |
| !!! | TTTTAAATTTCTCATTCATC+TGG | - | chr4_2:4812358-4812377 | None:intergenic | 20.0% |
| !! | GATATTGTTGTAAAAACAAA+AGG | - | chr4_2:4812755-4812774 | None:intergenic | 20.0% |
| !!! | GTTAATTTTTTTGTCTACTA+TGG | + | chr4_2:4813032-4813051 | Msa0584790:intron | 20.0% |
| !!! | TCAAAATAAAAAAAGTGTTC+GGG | + | chr4_2:4813076-4813095 | Msa0584790:intron | 20.0% |
| !! | CTAAAGTTATAAATCGAATT+AGG | + | chr4_2:4813364-4813383 | Msa0584790:intron | 20.0% |
| !! | AAAGTTATAAATCGAATTAG+GGG | + | chr4_2:4813366-4813385 | Msa0584790:intron | 20.0% |
| !!! | TTTTTTTTTTTTGTTTTGGG+GGG | - | chr4_2:4813598-4813617 | None:intergenic | 20.0% |
| !!! | GGGTTTTTTTTTTTTTGTTT+TGG | - | chr4_2:4813602-4813621 | None:intergenic | 20.0% |
| !! | AACTAAAAAAAATGTATTGG+AGG | - | chr4_2:4813626-4813645 | None:intergenic | 20.0% |
| !! | TGGAACTAAAAAAAATGTAT+TGG | - | chr4_2:4813629-4813648 | None:intergenic | 20.0% |
| !!! | CTTTAATTTGTTTGCAAATT+TGG | - | chr4_2:4813781-4813800 | None:intergenic | 20.0% |
| !! | TTATAAATCAAATGGAAAGT+GGG | + | chr4_2:4813868-4813887 | Msa0584790:intron | 20.0% |
| !! | AATAAAGTTGTAGATTGAAT+TGG | + | chr4_2:4813929-4813948 | Msa0584790:intron | 20.0% |
| !! | ATAAAGTTGTAGATTGAATT+GGG | + | chr4_2:4813930-4813949 | Msa0584790:intron | 20.0% |
| !!! | AATTGAGTGTTTTGAATTAA+TGG | + | chr4_2:4814017-4814036 | Msa0584790:intron | 20.0% |
| !!! | ATTGAGTGTTTTGAATTAAT+GGG | + | chr4_2:4814018-4814037 | Msa0584790:intron | 20.0% |
| !! | ATATCAAACTATTTGTGTAA+AGG | + | chr4_2:4814957-4814976 | Msa0584790:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | + | chr4_2:4815180-4815199 | Msa0584790:intron | 20.0% |
| !!! | TTTTTTAAAAAGAACCTTCT+TGG | + | chr4_2:4815479-4815498 | Msa0584790:intron | 20.0% |
| !! | AAATAGATATAAAAACAGAG+AGG | + | chr4_2:4817112-4817131 | Msa0584790:intron | 20.0% |
| !! | TAAAAGAAGTAAAAAGGAAA+AGG | - | chr4_2:4817182-4817201 | None:intergenic | 20.0% |
| !! | GAAAAAAACATAAATCTAAC+TGG | - | chr4_2:4817535-4817554 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTTCTTAGGTAAA+AGG | + | chr4_2:4817544-4817563 | Msa0584790:intron | 20.0% |
| !!! | TAAAAGTTATTTTGAAGTGT+TGG | - | chr4_2:4817634-4817653 | None:intergenic | 20.0% |
| !! | TTAAGTTTATCCTATTTCAT+CGG | + | chr4_2:4817678-4817697 | Msa0584790:intron | 20.0% |
| !! | GAAAGTGACATAAAAAATTA+AGG | - | chr4_2:4817770-4817789 | None:intergenic | 20.0% |
| !!! | CTCAATTGATTTAAAATCAA+TGG | - | chr4_2:4817866-4817885 | None:intergenic | 20.0% |
| !! | GAAAAATTGTATACATATGT+AGG | - | chr4_2:4818280-4818299 | None:intergenic | 20.0% |
| !!! | TAGTGTTTAACTATTCTTTT+TGG | + | chr4_2:4818330-4818349 | Msa0584790:intron | 20.0% |
| !!! | ATAGTCATACTTTTTTTTAG+GGG | + | chr4_2:4818450-4818469 | Msa0584790:intron | 20.0% |
| !! | ACAACTCAAATTATTGATAA+AGG | + | chr4_2:4818586-4818605 | Msa0584790:intron | 20.0% |
| !! | AAAAACTAAGAGTGAAAAAT+AGG | + | chr4_2:4818753-4818772 | Msa0584790:intron | 20.0% |
| !! | AAAACTAAGAGTGAAAAATA+GGG | + | chr4_2:4818754-4818773 | Msa0584790:intron | 20.0% |
| !!! | TTAGAGTTTTATCAGATATA+TGG | + | chr4_2:4818801-4818820 | Msa0584790:intron | 20.0% |
| !!! | TAGAGTTTTATCAGATATAT+GGG | + | chr4_2:4818802-4818821 | Msa0584790:intron | 20.0% |
| !! | AAAAAATAAACAAGAGATCA+TGG | + | chr4_2:4818841-4818860 | Msa0584790:intron | 20.0% |
| !! | AAACATTTCACAAAAGAAAA+GGG | + | chr4_2:4818881-4818900 | Msa0584790:intron | 20.0% |
| !! | TATTCATGAAAAGAAATTGA+CGG | + | chr4_2:4818966-4818985 | Msa0584790:intron | 20.0% |
| !! | TCATAAATTAAAATAGACGT+AGG | + | chr4_2:4819237-4819256 | Msa0584790:intron | 20.0% |
| !!! | ACTTTTTGCAAAGTTAAAAA+AGG | - | chr4_2:4819395-4819414 | None:intergenic | 20.0% |
| !! | TTGATGTAATACAACATATT+CGG | - | chr4_2:4819452-4819471 | None:intergenic | 20.0% |
| !!! | ATTGACTGATTTTAAATTGA+TGG | - | chr4_2:4819531-4819550 | None:intergenic | 20.0% |
| !!! | GTCTGAAATATAATATTTTC+CGG | + | chr4_2:4819568-4819587 | Msa0584790:intron | 20.0% |
| !! | AAAGGAGAAATTTATGTTAA+AGG | + | chr4_2:4819688-4819707 | Msa0584790:intron | 20.0% |
| !! | GAGAAATTTAAAACAAATCG+AGG | + | chr4_2:4812365-4812384 | Msa0584790:intron | 25.0% |
| ! | ACCTATATATAATTGTTGTC+AGG | + | chr4_2:4812573-4812592 | Msa0584790:intron | 25.0% |
| ! | ACCTGACAACAATTATATAT+AGG | - | chr4_2:4812577-4812596 | None:intergenic | 25.0% |
| ! | AAGGAAAATTTCTAATCACT+AGG | - | chr4_2:4813237-4813256 | None:intergenic | 25.0% |
| !!! | TTTTCCTTTAAGAGAATAAG+TGG | + | chr4_2:4813249-4813268 | Msa0584790:intron | 25.0% |
| ! | CTTAAATATGTCGTCTAATA+AGG | + | chr4_2:4813411-4813430 | Msa0584790:intron | 25.0% |
| !!! | TTTTTTTTTTTGTTTTGGGG+GGG | - | chr4_2:4813597-4813616 | None:intergenic | 25.0% |
| ! | AAAAAAAATGTATTGGAGGA+GGG | - | chr4_2:4813622-4813641 | None:intergenic | 25.0% |
| ! | TAAAAAAAATGTATTGGAGG+AGG | - | chr4_2:4813623-4813642 | None:intergenic | 25.0% |
| !!! | TTTTTTAGTTCCATCAAATG+AGG | + | chr4_2:4813636-4813655 | Msa0584790:intron | 25.0% |
| ! | AAAAAAAAGGAAAGAGTAAG+TGG | - | chr4_2:4813728-4813747 | None:intergenic | 25.0% |
| !! | AATTTGTTTGCAAATTTGGA+GGG | - | chr4_2:4813777-4813796 | None:intergenic | 25.0% |
| !!! | TAATTTGTTTGCAAATTTGG+AGG | - | chr4_2:4813778-4813797 | None:intergenic | 25.0% |
| ! | GTTATAAATCAAATGGAAAG+TGG | + | chr4_2:4813867-4813886 | Msa0584790:intron | 25.0% |
| ! | TTAATTCATGATAGAACAGA+TGG | + | chr4_2:4814471-4814490 | Msa0584790:intron | 25.0% |
| ! | CAGTTATAAAAATCTGCATA+TGG | + | chr4_2:4814825-4814844 | Msa0584790:intron | 25.0% |
| ! | AAACTATTTGTGTAAAGGAA+TGG | + | chr4_2:4814962-4814981 | Msa0584790:intron | 25.0% |
| ! | ATAACACAAAAGAAGTTGTA+AGG | - | chr4_2:4815342-4815361 | None:intergenic | 25.0% |
| !!! | TTTGTGTTATTTTCAGAGTA+AGG | + | chr4_2:4815352-4815371 | Msa0584790:intron | 25.0% |
| ! | CTTATACATTTACAAACTCT+GGG | - | chr4_2:4815382-4815401 | None:intergenic | 25.0% |
| ! | TCTTATACATTTACAAACTC+TGG | - | chr4_2:4815383-4815402 | None:intergenic | 25.0% |
| ! | GAGTTTGTAAATGTATAAGA+AGG | + | chr4_2:4815383-4815402 | Msa0584790:intron | 25.0% |
| ! | AATATAAACCTTCTTGAACA+TGG | - | chr4_2:4815441-4815460 | None:intergenic | 25.0% |
| ! | GGTTTATATTAAGAACCTTA+TGG | + | chr4_2:4815451-4815470 | Msa0584790:intron | 25.0% |
| !!! | AAGGTTCTTTTTAAAAAAGC+TGG | - | chr4_2:4815477-4815496 | None:intergenic | 25.0% |
| ! | TTCTTATAAATAAGATCGGA+TGG | - | chr4_2:4815530-4815549 | None:intergenic | 25.0% |
| ! | TAATTTATGTATACTCCATG+CGG | - | chr4_2:4815663-4815682 | None:intergenic | 25.0% |
| !! | TTTTGAATTTGACAGAGTAA+GGG | - | chr4_2:4816335-4816354 | None:intergenic | 25.0% |
| !! | CAAAAGTACATAAACACTTA+AGG | + | chr4_2:4816350-4816369 | Msa0584790:intron | 25.0% |
| ! | TAGAGTCAAAACTGAATTAT+TGG | + | chr4_2:4816414-4816433 | Msa0584790:intron | 25.0% |
| ! | TTACACAAATTTGACAACAA+AGG | + | chr4_2:4816885-4816904 | Msa0584790:intron | 25.0% |
| ! | TTTCTGTAAGAATGAAATGA+TGG | - | chr4_2:4817095-4817114 | None:intergenic | 25.0% |
| ! | TTATCTATGTGAAGACTATT+GGG | - | chr4_2:4817226-4817245 | None:intergenic | 25.0% |
| ! | ATTATCTATGTGAAGACTAT+TGG | - | chr4_2:4817227-4817246 | None:intergenic | 25.0% |
| !!! | TTTTACTTTTTCTTGAGTGT+TGG | - | chr4_2:4817313-4817332 | None:intergenic | 25.0% |
| ! | TAAGTTTATCCTATTTCATC+GGG | + | chr4_2:4817679-4817698 | Msa0584790:intron | 25.0% |
| ! | AATTTCTACGAAAATTACGA+TGG | + | chr4_2:4817739-4817758 | Msa0584790:intron | 25.0% |
| !!! | TACTCGTTTAATGTTTTAAC+GGG | - | chr4_2:4817807-4817826 | None:intergenic | 25.0% |
| !!! | CTACTCGTTTAATGTTTTAA+CGG | - | chr4_2:4817808-4817827 | None:intergenic | 25.0% |
| !!! | ATAATCGGTCATTTTTCTAA+AGG | + | chr4_2:4817892-4817911 | Msa0584790:intron | 25.0% |
| ! | AAAATTGTATACATATGGAC+CGG | - | chr4_2:4817978-4817997 | None:intergenic | 25.0% |
| !!! | CCATAAAAATTGATTTGGAT+CGG | - | chr4_2:4818155-4818174 | None:intergenic | 25.0% |
| !! | CCAAATCAATTTTTATGGTA+CGG | + | chr4_2:4818157-4818176 | Msa0584790:intron | 25.0% |
| !!! | ACCTCTTTTGGTAATTTTTT+GGG | - | chr4_2:4818419-4818438 | None:intergenic | 25.0% |
| !!! | TACCTCTTTTGGTAATTTTT+TGG | - | chr4_2:4818420-4818439 | None:intergenic | 25.0% |
| ! | CAAACATTTCACAAAAGAAA+AGG | + | chr4_2:4818880-4818899 | Msa0584790:intron | 25.0% |
| ! | ATTCATGAAAAGAAATTGAC+GGG | + | chr4_2:4818967-4818986 | Msa0584790:intron | 25.0% |
| ! | ATTAACGTATGTATCAAAGA+TGG | + | chr4_2:4819092-4819111 | Msa0584790:intron | 25.0% |
| ! | TCAACGATGAATTTAAATTG+AGG | - | chr4_2:4819194-4819213 | None:intergenic | 25.0% |
| ! | TATGTTGTATTACATCAACA+TGG | + | chr4_2:4819454-4819473 | Msa0584790:intron | 25.0% |
| !! | TTTTTATAGGTTCTTTTCAC+CGG | - | chr4_2:4819590-4819609 | None:intergenic | 25.0% |
| !!! | TTTCAATTTTGGGTGAATTA+TGG | + | chr4_2:4819641-4819660 | Msa0584790:intron | 25.0% |
| ! | TTATGTTCGGTCAAAAAAAA+AGG | + | chr4_2:4819670-4819689 | Msa0584790:intron | 25.0% |
| ! | AAGTAGAACTCAAAGTAAAT+TGG | + | chr4_2:4819784-4819803 | Msa0584790:intron | 25.0% |
| ! | AGTAGAACTCAAAGTAAATT+GGG | + | chr4_2:4819785-4819804 | Msa0584790:intron | 25.0% |
| ! | GGGTGTAAGAAAAATAAAAA+TGG | - | chr4_2:4819834-4819853 | None:intergenic | 25.0% |
| ! | CTCGATTCTAATATAAAATC+TGG | - | chr4_2:4819985-4820004 | None:intergenic | 25.0% |
| ! | ATATTAGAATCGAGTAAACA+AGG | + | chr4_2:4819991-4820010 | Msa0584790:CDS | 25.0% |
| TTGTTTGACAGAAGAAATGT+AGG | + | chr4_2:4812520-4812539 | Msa0584790:intron | 30.0% | |
| ACAACCACTTATTCTCTTAA+AGG | - | chr4_2:4813256-4813275 | None:intergenic | 30.0% | |
| ACAATGCATAGTATATGTAG+GGG | - | chr4_2:4813297-4813316 | None:intergenic | 30.0% | |
| GACAATGCATAGTATATGTA+GGG | - | chr4_2:4813298-4813317 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTTGTTTTGGGGG+GGG | - | chr4_2:4813596-4813615 | None:intergenic | 30.0% |
| ATAAAACTCTCCTCATTTGA+TGG | - | chr4_2:4813649-4813668 | None:intergenic | 30.0% | |
| AGAGTAAGTGGAATAAATAG+AGG | - | chr4_2:4813716-4813735 | None:intergenic | 30.0% | |
| GGTTTGGGAAGAAAAAAAAA+AGG | - | chr4_2:4813741-4813760 | None:intergenic | 30.0% | |
| ATTTGTTTGCAAATTTGGAG+GGG | - | chr4_2:4813776-4813795 | None:intergenic | 30.0% | |
| CAACATGCCATATAAAGAAA+TGG | + | chr4_2:4814054-4814073 | Msa0584790:intron | 30.0% | |
| GAATTTCGAAAGTAACGAAA+GGG | - | chr4_2:4814140-4814159 | None:intergenic | 30.0% | |
| ATTCGTAAGTAACAAGTGTT+TGG | + | chr4_2:4814156-4814175 | Msa0584790:intron | 30.0% | |
| ! | TTCATAACAAGTGTTTCTGA+TGG | + | chr4_2:4814242-4814261 | Msa0584790:intron | 30.0% |
| TCCATATGATAATTTCCTGA+AGG | + | chr4_2:4814438-4814457 | Msa0584790:intron | 30.0% | |
| TTGATATACAAGAAGATCCA+TGG | + | chr4_2:4814521-4814540 | Msa0584790:intron | 30.0% | |
| GGAAGCAAATCAATGTATAA+GGG | - | chr4_2:4814623-4814642 | None:intergenic | 30.0% | |
| TGGAAGCAAATCAATGTATA+AGG | - | chr4_2:4814624-4814643 | None:intergenic | 30.0% | |
| ! | TCATGAAATGACCAAGTTTT+GGG | - | chr4_2:4814862-4814881 | None:intergenic | 30.0% |
| ! | TTCATGAAATGACCAAGTTT+TGG | - | chr4_2:4814863-4814882 | None:intergenic | 30.0% |
| CAAAAGAAGTTGTAAGGTTA+GGG | - | chr4_2:4815336-4815355 | None:intergenic | 30.0% | |
| ACAAAAGAAGTTGTAAGGTT+AGG | - | chr4_2:4815337-4815356 | None:intergenic | 30.0% | |
| TTTGAACAAACCTTCTTTGA+AGG | - | chr4_2:4815416-4815435 | None:intergenic | 30.0% | |
| TTCAAAAACCATGTTCAAGA+AGG | + | chr4_2:4815430-4815449 | Msa0584790:intron | 30.0% | |
| !! | TTTTAAAAAAGCTGGCCATA+AGG | - | chr4_2:4815469-4815488 | None:intergenic | 30.0% |
| ! | TTTTTATAAATAGGACCGCA+TGG | + | chr4_2:4815645-4815664 | Msa0584790:intron | 30.0% |
| TGTTATCATCAAAACTTCAG+AGG | - | chr4_2:4815766-4815785 | None:intergenic | 30.0% | |
| ! | GAATCAAGTTTTTGTTCTGT+AGG | + | chr4_2:4815864-4815883 | Msa0584790:intron | 30.0% |
| TTTGAGAGAAGCTGAAATTA+TGG | + | chr4_2:4815920-4815939 | Msa0584790:intron | 30.0% | |
| GAAACAAACAAACAACTTCA+AGG | + | chr4_2:4816091-4816110 | Msa0584790:intron | 30.0% | |
| GATATGGTTATTGTCTTGAA+AGG | - | chr4_2:4816169-4816188 | None:intergenic | 30.0% | |
| ! | CTTTTGAATTTGACAGAGTA+AGG | - | chr4_2:4816336-4816355 | None:intergenic | 30.0% |
| CACAAGAAAAAGACTTTCTA+TGG | - | chr4_2:4816531-4816550 | None:intergenic | 30.0% | |
| TTAGGATTTCAGATAACCTA+GGG | - | chr4_2:4816675-4816694 | None:intergenic | 30.0% | |
| ATTAGGATTTCAGATAACCT+AGG | - | chr4_2:4816676-4816695 | None:intergenic | 30.0% | |
| !!! | GTGGATTAGGATTTTAGATT+AGG | - | chr4_2:4816693-4816712 | None:intergenic | 30.0% |
| GACGACTAAAAGAAGTAAAA+AGG | - | chr4_2:4817188-4817207 | None:intergenic | 30.0% | |
| !!! | GAAGACTATTGGGTTTTTTA+GGG | - | chr4_2:4817216-4817235 | None:intergenic | 30.0% |
| !!! | TGAAGACTATTGGGTTTTTT+AGG | - | chr4_2:4817217-4817236 | None:intergenic | 30.0% |
| ! | CAAGATGTTGTTGATAAATC+AGG | - | chr4_2:4817832-4817851 | None:intergenic | 30.0% |
| !! | AAAATTGATTTGGATCGGTT+CGG | - | chr4_2:4818150-4818169 | None:intergenic | 30.0% |
| ! | CCGATCCAAATCAATTTTTA+TGG | + | chr4_2:4818152-4818171 | Msa0584790:intron | 30.0% |
| CCGTACCATAAAAATTGATT+TGG | - | chr4_2:4818160-4818179 | None:intergenic | 30.0% | |
| TCCCAAAAAATTACCAAAAG+AGG | + | chr4_2:4818415-4818434 | Msa0584790:intron | 30.0% | |
| GATTAACCTAAAAACTAGAG+AGG | + | chr4_2:4818643-4818662 | Msa0584790:intron | 30.0% | |
| !!! | CTTTATCCTCTCTAGTTTTT+AGG | - | chr4_2:4818652-4818671 | None:intergenic | 30.0% |
| !!! | TTCACTGTCGTTTTAAGTTT+TGG | - | chr4_2:4818730-4818749 | None:intergenic | 30.0% |
| ACAATGTGTTCATGAACAAA+TGG | + | chr4_2:4818911-4818930 | Msa0584790:intron | 30.0% | |
| TTCATGAAAAGAAATTGACG+GGG | + | chr4_2:4818968-4818987 | Msa0584790:intron | 30.0% | |
| !! | GACTGATTTTAAATTGATGG+TGG | - | chr4_2:4819528-4819547 | None:intergenic | 30.0% |
| TGATTGATATAGACTGAATG+GGG | - | chr4_2:4819854-4819873 | None:intergenic | 30.0% | |
| GTGATTGATATAGACTGAAT+GGG | - | chr4_2:4819855-4819874 | None:intergenic | 30.0% | |
| AGTGATTGATATAGACTGAA+TGG | - | chr4_2:4819856-4819875 | None:intergenic | 30.0% | |
| ! | TGTTGATGTTCAACATTTTG+TGG | - | chr4_2:4820084-4820103 | None:intergenic | 30.0% |
| ! | TGTTCAACATTTTGTGGTTG+AGG | - | chr4_2:4812202-4812221 | None:intergenic | 35.0% |
| !! | GGTTGATGTTCAACATTTTG+TGG | - | chr4_2:4812208-4812227 | None:intergenic | 35.0% |
| ! | TGATGTTCAACATTTTGTGG+TGG | - | chr4_2:4812205-4812224 | None:intergenic | 35.0% |
| !! | GGTTGATGTTCAACATTTTG+TGG | - | chr4_2:4812208-4812227 | None:intergenic | 35.0% |
| CTCATTCATCTGGTGTATAA+GGG | - | chr4_2:4812348-4812367 | None:intergenic | 35.0% | |
| TCTCATTCATCTGGTGTATA+AGG | - | chr4_2:4812349-4812368 | None:intergenic | 35.0% | |
| GTAACATTCACTCTTGCTAA+TGG | - | chr4_2:4812728-4812747 | None:intergenic | 35.0% | |
| TAAGAGAATAAGTGGTTGTC+CGG | + | chr4_2:4813257-4813276 | Msa0584790:intron | 35.0% | |
| GGACAATGCATAGTATATGT+AGG | - | chr4_2:4813299-4813318 | None:intergenic | 35.0% | |
| !! | TCGTCTAATAAGGCTTTGTT+TGG | + | chr4_2:4813421-4813440 | Msa0584790:intron | 35.0% |
| !! | CGTCTAATAAGGCTTTGTTT+GGG | + | chr4_2:4813422-4813441 | Msa0584790:intron | 35.0% |
| !! | TAATAAGGCTTTGTTTGGGA+GGG | + | chr4_2:4813426-4813445 | Msa0584790:intron | 35.0% |
| !!! | TTTTTTTTTGTTTTGGGGGG+GGG | - | chr4_2:4813595-4813614 | None:intergenic | 35.0% |
| AATAGAGGACATTGAGAGAA+GGG | - | chr4_2:4813701-4813720 | None:intergenic | 35.0% | |
| AAATAGAGGACATTGAGAGA+AGG | - | chr4_2:4813702-4813721 | None:intergenic | 35.0% | |
| TCACACACACATTCTCAATT+AGG | - | chr4_2:4813804-4813823 | None:intergenic | 35.0% | |
| TGGAGAGCCATTTCTTTATA+TGG | - | chr4_2:4814064-4814083 | None:intergenic | 35.0% | |
| ACAGAAGATTTCCACTTTCA+TGG | + | chr4_2:4814111-4814130 | Msa0584790:intron | 35.0% | |
| CAGAAGATTTCCACTTTCAT+GGG | + | chr4_2:4814112-4814131 | Msa0584790:intron | 35.0% | |
| CGAATTTCGAAAGTAACGAA+AGG | - | chr4_2:4814141-4814160 | None:intergenic | 35.0% | |
| AGAAAGTAAAGCAGTACGAA+AGG | - | chr4_2:4814210-4814229 | None:intergenic | 35.0% | |
| ACAAAAATGGCACATGAATC+AGG | - | chr4_2:4814285-4814304 | None:intergenic | 35.0% | |
| TTTCCACTCTGCAACAAAAA+TGG | - | chr4_2:4814298-4814317 | None:intergenic | 35.0% | |
| CCTAAGTTTGAATCCAAGAA+TGG | - | chr4_2:4814322-4814341 | None:intergenic | 35.0% | |
| CCATTCTTGGATTCAAACTT+AGG | + | chr4_2:4814319-4814338 | Msa0584790:intron | 35.0% | |
| GCCTTCAGGAAATTATCATA+TGG | - | chr4_2:4814442-4814461 | None:intergenic | 35.0% | |
| TAAATATTGTTGCCAATCCG+CGG | - | chr4_2:4814573-4814592 | None:intergenic | 35.0% | |
| !! | CGGATTGGCAACAATATTTA+TGG | + | chr4_2:4814573-4814592 | Msa0584790:intron | 35.0% |
| !! | CAAGGAGGTGTATCTTTTAT+CGG | + | chr4_2:4814645-4814664 | Msa0584790:intron | 35.0% |
| !!! | TTTTCGGAGCTGTATTGATT+TGG | + | chr4_2:4814680-4814699 | Msa0584790:intron | 35.0% |
| !! | TGTATTGATTTGGTGTGCAT+AGG | + | chr4_2:4814690-4814709 | Msa0584790:intron | 35.0% |
| AAGGACAACGAAGATTAGAA+AGG | - | chr4_2:4814763-4814782 | None:intergenic | 35.0% | |
| !!! | TCGTTGTCCTTCAACTTTTT+TGG | + | chr4_2:4814772-4814791 | Msa0584790:intron | 35.0% |
| TCACACACCAAAAAAGTTGA+AGG | - | chr4_2:4814782-4814801 | None:intergenic | 35.0% | |
| CATCACAAGTCACTCTTAAA+AGG | + | chr4_2:4815082-4815101 | Msa0584790:intron | 35.0% | |
| CTTTCTGAACCTATGAAGTA+CGG | - | chr4_2:4815253-4815272 | None:intergenic | 35.0% | |
| AGGTTGAAATCCTTCAAAGA+AGG | + | chr4_2:4815403-4815422 | Msa0584790:intron | 35.0% | |
| ! | TGGAGTATTTACTTGGACTA+GGG | - | chr4_2:4815510-4815529 | None:intergenic | 35.0% |
| ! | ATGGAGTATTTACTTGGACT+AGG | - | chr4_2:4815511-4815530 | None:intergenic | 35.0% |
| TCAACGTGTTGAGTCAAAAT+TGG | + | chr4_2:4815726-4815745 | Msa0584790:intron | 35.0% | |
| ! | TCAGTCTTTTAATGTTGACG+TGG | - | chr4_2:4815994-4816013 | None:intergenic | 35.0% |
| !!! | CTAGTTTTGTCTTCTTCTGA+AGG | + | chr4_2:4816014-4816033 | Msa0584790:intron | 35.0% |
| !! | TTTTGTCTTCTTCTGAAGGA+AGG | + | chr4_2:4816018-4816037 | Msa0584790:intron | 35.0% |
| ! | ATTTTGTCGTCTTCTGACTA+CGG | + | chr4_2:4816065-4816084 | Msa0584790:intron | 35.0% |
| GGTTGGAATGTTTCTTGATA+TGG | - | chr4_2:4816185-4816204 | None:intergenic | 35.0% | |
| AGAAACTTATTCCATGAGGT+TGG | - | chr4_2:4816202-4816221 | None:intergenic | 35.0% | |
| CTTGAGAAACTTATTCCATG+AGG | - | chr4_2:4816206-4816225 | None:intergenic | 35.0% | |
| CTCATGGAATAAGTTTCTCA+AGG | + | chr4_2:4816204-4816223 | Msa0584790:intron | 35.0% | |
| CTCAGATTTCTCTCCATATA+AGG | + | chr4_2:4816261-4816280 | Msa0584790:intron | 35.0% | |
| ! | CAAGTCTTATGCTCCTTATA+TGG | - | chr4_2:4816277-4816296 | None:intergenic | 35.0% |
| CACAAGAAAGAGACTTCAAA+TGG | - | chr4_2:4816561-4816580 | None:intergenic | 35.0% | |
| !! | GGTTTCTGAAGTGGTATATT+AGG | - | chr4_2:4816654-4816673 | None:intergenic | 35.0% |
| CAAAGGAACTACATTTGAAG+AGG | + | chr4_2:4816902-4816921 | Msa0584790:intron | 35.0% | |
| AAGAGGCAATAATTTGATCC+CGG | + | chr4_2:4816919-4816938 | Msa0584790:intron | 35.0% | |
| TTACGAATGAAACATGATCC+GGG | - | chr4_2:4816940-4816959 | None:intergenic | 35.0% | |
| CTTACGAATGAAACATGATC+CGG | - | chr4_2:4816941-4816960 | None:intergenic | 35.0% | |
| !! | TTGAGAATTTCTAGTTGCCA+AGG | - | chr4_2:4817043-4817062 | None:intergenic | 35.0% |
| TGAAACGTTAGTCGAAGTAA+GGG | - | chr4_2:4817144-4817163 | None:intergenic | 35.0% | |
| ATGAAACGTTAGTCGAAGTA+AGG | - | chr4_2:4817145-4817164 | None:intergenic | 35.0% | |
| ! | AGGAAAAGGACAAGTTTGTT+TGG | - | chr4_2:4817168-4817187 | None:intergenic | 35.0% |
| AAATCTTGAGTGACCTTCTT+GGG | - | chr4_2:4817503-4817522 | None:intergenic | 35.0% | |
| TAAATCTTGAGTGACCTTCT+TGG | - | chr4_2:4817504-4817523 | None:intergenic | 35.0% | |
| AATTCAAGACCCGATGAAAT+AGG | - | chr4_2:4817691-4817710 | None:intergenic | 35.0% | |
| !! | TTAACGGGCTTAACAAAGTT+AGG | - | chr4_2:4817792-4817811 | None:intergenic | 35.0% |
| !! | CTCAAGGCATCATTTTTAGA+AGG | - | chr4_2:4817949-4817968 | None:intergenic | 35.0% |
| ! | CGATGAATTCTTCATTGGTT+CGG | - | chr4_2:4818209-4818228 | None:intergenic | 35.0% |
| CGAACCAATGAAGAATTCAT+CGG | + | chr4_2:4818207-4818226 | Msa0584790:intron | 35.0% | |
| TAGGGTGTAACAATTCTGTA+TGG | - | chr4_2:4818261-4818280 | None:intergenic | 35.0% | |
| !!! | GTGAATCTTCTTGCTACTTT+TGG | - | chr4_2:4818386-4818405 | None:intergenic | 35.0% |
| TGTAGTCATGGAATTTGGAA+AGG | - | chr4_2:4818525-4818544 | None:intergenic | 35.0% | |
| TTCGTCGCGATAAATATTCA+TGG | - | chr4_2:4819153-4819172 | None:intergenic | 35.0% | |
| ! | TGATGTTCAACATTTTGTGG+TGG | - | chr4_2:4812205-4812224 | None:intergenic | 35.0% |
| AAGTCAAATGGTTGCACATG+TGG | - | chr4_2:4812289-4812308 | None:intergenic | 40.0% | |
| ! | ATTTTGTGTGCGAAGATGTG+AGG | + | chr4_2:4812816-4812835 | Msa0584790:intron | 40.0% |
| ! | TTTTGTGTGCGAAGATGTGA+GGG | + | chr4_2:4812817-4812836 | Msa0584790:intron | 40.0% |
| AAGTGTGTGTTTGTGTGTGA+AGG | + | chr4_2:4812987-4813006 | Msa0584790:intron | 40.0% | |
| ! | TGAGCTTAACTCAGTTGGTA+GGG | - | chr4_2:4813320-4813339 | None:intergenic | 40.0% |
| GGGTTTATGTGAGCAATTGA+TGG | + | chr4_2:4813386-4813405 | Msa0584790:intron | 40.0% | |
| !! | CTAATAAGGCTTTGTTTGGG+AGG | + | chr4_2:4813425-4813444 | Msa0584790:intron | 40.0% |
| !! | AATAAGGCTTTGTTTGGGAG+GGG | + | chr4_2:4813427-4813446 | Msa0584790:intron | 40.0% |
| TTGGGGTGAGAGAAATGTAA+AGG | + | chr4_2:4813461-4813480 | Msa0584790:intron | 40.0% | |
| !!! | TTTTTTTTGTTTTGGGGGGG+GGG | - | chr4_2:4813594-4813613 | None:intergenic | 40.0% |
| ACATTGAGAGAAGGGACTTT+GGG | - | chr4_2:4813693-4813712 | None:intergenic | 40.0% | |
| TTTGCAAATTTGGAGGGGAA+GGG | - | chr4_2:4813771-4813790 | None:intergenic | 40.0% | |
| !! | GGAAATCTTCTGTTGCTTTC+CGG | - | chr4_2:4814104-4814123 | None:intergenic | 40.0% |
| ! | CTGATGACACAACTTTTCCA+TGG | - | chr4_2:4814541-4814560 | None:intergenic | 40.0% |
| !!! | CTGCATCGATGTGTTGTTTT+GGG | + | chr4_2:4814596-4814615 | Msa0584790:intron | 40.0% |
| !! | ACATTGATTTGCTTCCAGCA+AGG | + | chr4_2:4814627-4814646 | Msa0584790:intron | 40.0% |
| TAAAAGATACACCTCCTTGC+TGG | - | chr4_2:4814644-4814663 | None:intergenic | 40.0% | |
| ! | TCGGCTTCCTTGCAATTTTT+CGG | + | chr4_2:4814664-4814683 | Msa0584790:intron | 40.0% |
| TACAGCTCCGAAAAATTGCA+AGG | - | chr4_2:4814674-4814693 | None:intergenic | 40.0% | |
| !! | ATTTGGTGTGCATAGGTTAC+AGG | + | chr4_2:4814697-4814716 | Msa0584790:intron | 40.0% |
| ATCTGCAATGACCCAAAACT+TGG | + | chr4_2:4814848-4814867 | Msa0584790:intron | 40.0% | |
| GTGTTCAGAACTATGAAGCA+CGG | + | chr4_2:4815106-4815125 | Msa0584790:intron | 40.0% | |
| GAACCTATGAAGTACGGATA+CGG | - | chr4_2:4815247-4815266 | None:intergenic | 40.0% | |
| CGTACTTCATAGGTTCAGAA+AGG | + | chr4_2:4815251-4815270 | Msa0584790:intron | 40.0% | |
| AATTCAGTCCCACTTCTACT+CGG | + | chr4_2:4815292-4815311 | Msa0584790:intron | 40.0% | |
| ! | GATCGGATGGAGTATTTACT+TGG | - | chr4_2:4815517-4815536 | None:intergenic | 40.0% |
| TCAGAGTCTGAGTCATTTGT+TGG | - | chr4_2:4815968-4815987 | None:intergenic | 40.0% | |
| ! | TTTTGTCGTCTTCTGACTAC+GGG | + | chr4_2:4816066-4816085 | Msa0584790:intron | 40.0% |
| CAAGAAACATTCCAACCTCA+TGG | + | chr4_2:4816188-4816207 | Msa0584790:intron | 40.0% | |
| TTACGCTGATATGCAATCAG+AGG | - | chr4_2:4816446-4816465 | None:intergenic | 40.0% | |
| !! | AGTGACTTGCTTCTACACAA+TGG | - | chr4_2:4816625-4816644 | None:intergenic | 40.0% |
| TATACCACTTCAGAAACCCT+AGG | + | chr4_2:4816656-4816675 | Msa0584790:intron | 40.0% | |
| ! | ATAACCTAGGGTTTCTGAAG+TGG | - | chr4_2:4816663-4816682 | None:intergenic | 40.0% |
| ! | TGTTTGTGTGGACTGAGTAA+AGG | + | chr4_2:4816832-4816851 | Msa0584790:intron | 40.0% |
| TAAAGGCAATGCCAATTGAG+TGG | + | chr4_2:4816849-4816868 | Msa0584790:intron | 40.0% | |
| CGGATCATGTTTCATTCGTA+AGG | + | chr4_2:4816939-4816958 | Msa0584790:intron | 40.0% | |
| TTTCCCTTCATTACTCACCT+TGG | + | chr4_2:4817023-4817042 | Msa0584790:intron | 40.0% | |
| TTGCCAAGGTGAGTAATGAA+GGG | - | chr4_2:4817029-4817048 | None:intergenic | 40.0% | |
| CATTTGTCGCTCAAAGTTCA+TGG | + | chr4_2:4817285-4817304 | Msa0584790:intron | 40.0% | |
| ! | CGACAAGTTTTTACCCAAGA+AGG | + | chr4_2:4817487-4817506 | Msa0584790:intron | 40.0% |
| ATGATGCCTTGAGAAAAGTC+CGG | + | chr4_2:4817956-4817975 | Msa0584790:intron | 40.0% | |
| CGAACCGATGAATTCTTCAT+TGG | - | chr4_2:4818214-4818233 | None:intergenic | 40.0% | |
| CGAGTTGTAGTCATGGAATT+TGG | - | chr4_2:4818530-4818549 | None:intergenic | 40.0% | |
| AAACTCACGAGTTGTAGTCA+TGG | - | chr4_2:4818537-4818556 | None:intergenic | 40.0% | |
| GGGATGTAAACAAGAAGAGA+AGG | + | chr4_2:4818704-4818723 | Msa0584790:intron | 40.0% | |
| TTGTGTCACATTCACTGCAT+AGG | - | chr4_2:4819912-4819931 | None:intergenic | 40.0% | |
| !! | TCAACATTTTGTGGTGGAGT+TGG | - | chr4_2:4820075-4820094 | None:intergenic | 40.0% |
| AAGTCAAATGGTTGCACATG+TGG | - | chr4_2:4812289-4812308 | None:intergenic | 40.0% | |
| ACTGCTAAAGCTTCTCGAGA+TGG | - | chr4_2:4812085-4812104 | None:intergenic | 45.0% | |
| ! | TCTGGTTCAGGCTGGTTATT+TGG | - | chr4_2:4812169-4812188 | None:intergenic | 45.0% |
| !! | TCAACATTTTGTGGTGGAGC+TGG | - | chr4_2:4812241-4812260 | None:intergenic | 45.0% |
| TCAAATGGTTGCACATGTGG+AGG | - | chr4_2:4812286-4812305 | None:intergenic | 45.0% | |
| TTGAGGTCGAAAGCTTGAAC+AGG | - | chr4_2:4812322-4812341 | None:intergenic | 45.0% | |
| CTGGTGTATAAGGGAGATTG+AGG | - | chr4_2:4812339-4812358 | None:intergenic | 45.0% | |
| GTGAGCTTAACTCAGTTGGT+AGG | - | chr4_2:4813321-4813340 | None:intergenic | 45.0% | |
| TGTGTGTGTGTGTGTTTGGA+GGG | - | chr4_2:4813569-4813588 | None:intergenic | 45.0% | |
| !!! | TTTTTTTGTTTTGGGGGGGG+GGG | - | chr4_2:4813593-4813612 | None:intergenic | 45.0% |
| CATTGAGAGAAGGGACTTTG+GGG | - | chr4_2:4813692-4813711 | None:intergenic | 45.0% | |
| GACATTGAGAGAAGGGACTT+TGG | - | chr4_2:4813694-4813713 | None:intergenic | 45.0% | |
| GTTTGCAAATTTGGAGGGGA+AGG | - | chr4_2:4813772-4813791 | None:intergenic | 45.0% | |
| GAGTTTGTGTGAGCAATTGC+TGG | + | chr4_2:4813952-4813971 | Msa0584790:intron | 45.0% | |
| CGAAAGGCAAACTCAAACTG+TGG | - | chr4_2:4814194-4814213 | None:intergenic | 45.0% | |
| !!! | GTGCCATTTTTGTTGCAGAG+TGG | + | chr4_2:4814292-4814311 | Msa0584790:intron | 45.0% |
| GCAGAGTGGAAATCCATTCT+TGG | + | chr4_2:4814306-4814325 | Msa0584790:intron | 45.0% | |
| TTATCATATGGACGCGATGC+TGG | - | chr4_2:4814430-4814449 | None:intergenic | 45.0% | |
| GATAATTTCCTGAAGGCTGC+TGG | + | chr4_2:4814445-4814464 | Msa0584790:intron | 45.0% | |
| ATTAACAACCAGCAGCCTTC+AGG | - | chr4_2:4814456-4814475 | None:intergenic | 45.0% | |
| !!! | GCTGCATCGATGTGTTGTTT+TGG | + | chr4_2:4814595-4814614 | Msa0584790:intron | 45.0% |
| !! | TTGATTTGCTTCCAGCAAGG+AGG | + | chr4_2:4814630-4814649 | Msa0584790:intron | 45.0% |
| TGTCCGTATCCGTACTTCAT+AGG | + | chr4_2:4815241-4815260 | Msa0584790:intron | 45.0% | |
| ! | AGTTTGCAAAAGCGCGCAAT+TGG | + | chr4_2:4815787-4815806 | Msa0584790:intron | 45.0% |
| ! | GTTTGCAAAAGCGCGCAATT+GGG | + | chr4_2:4815788-4815807 | Msa0584790:intron | 45.0% |
| CAATTGGGTATGCGAATGTG+TGG | + | chr4_2:4815803-4815822 | Msa0584790:intron | 45.0% | |
| GAAATCTGAGAGACGTTGAG+AGG | - | chr4_2:4816251-4816270 | None:intergenic | 45.0% | |
| ! | AGGGCACTTGCAAAAGTTCA+GGG | - | chr4_2:4816316-4816335 | None:intergenic | 45.0% |
| !! | AAGGGCACTTGCAAAAGTTC+AGG | - | chr4_2:4816317-4816336 | None:intergenic | 45.0% |
| ACTCATAGTGCTAGCTGCTA+CGG | - | chr4_2:4816803-4816822 | None:intergenic | 45.0% | |
| AGTGGAGTTGACTGTTTGTG+TGG | + | chr4_2:4816820-4816839 | Msa0584790:intron | 45.0% | |
| TGTCACAAGCACCACTCAAT+TGG | - | chr4_2:4816863-4816882 | None:intergenic | 45.0% | |
| GTTGCCAAGGTGAGTAATGA+AGG | - | chr4_2:4817030-4817049 | None:intergenic | 45.0% | |
| ! | TATGGACCGGACTTTTCTCA+AGG | - | chr4_2:4817965-4817984 | None:intergenic | 45.0% |
| CGGCTAAACTCAATTCGCAT+CGG | - | chr4_2:4819432-4819451 | None:intergenic | 45.0% | |
| ACTGCTAAAGCTTCTCGAGA+TGG | - | chr4_2:4812085-4812104 | None:intergenic | 45.0% | |
| ! | TGGTTGAGGCTGAGCATTTT+CGG | - | chr4_2:4812188-4812207 | None:intergenic | 45.0% |
| ! | GTTGGTGCATTTTGTGGTTG+AGG | - | chr4_2:4820057-4820076 | None:intergenic | 45.0% |
| TCAAATGGTTGCACATGTGG+AGG | - | chr4_2:4812286-4812305 | None:intergenic | 45.0% | |
| CTGGTGTATAAGGGAGATTG+AGG | - | chr4_2:4812339-4812358 | None:intergenic | 45.0% | |
| !!! | TTTAAAATTTTGATTAATAA+TGG | + | chr4_2:4812790-4812809 | Msa0584790:intron | 5.0% |
| !!! | ATACTTTTAATTTAATTATA+TGG | - | chr4_2:4815843-4815862 | None:intergenic | 5.0% |
| !! | AATCAAATAAAAAATTATTT+GGG | - | chr4_2:4816471-4816490 | None:intergenic | 5.0% |
| !! | TAATCAAATAAAAAATTATT+TGG | - | chr4_2:4816472-4816491 | None:intergenic | 5.0% |
| ! | TCAGGCTGGTTATTTGGTGG+TGG | - | chr4_2:4812163-4812182 | None:intergenic | 50.0% |
| ! | GGTTCAGGCTGGTTATTTGG+TGG | - | chr4_2:4812166-4812185 | None:intergenic | 50.0% |
| !!! | GAGCATTTTCTGGTTCAGGC+TGG | - | chr4_2:4812177-4812196 | None:intergenic | 50.0% |
| !!! | GGCTGAGCATTTTCTGGTTC+AGG | - | chr4_2:4812181-4812200 | None:intergenic | 50.0% |
| ! | GGTTGAGGCTGAGCATTTTC+TGG | - | chr4_2:4812187-4812206 | None:intergenic | 50.0% |
| ! | TGTGGAGGTGGTGCATTTTG+TGG | - | chr4_2:4812271-4812290 | None:intergenic | 50.0% |
| AATGGTTGCACATGTGGAGG+TGG | - | chr4_2:4812283-4812302 | None:intergenic | 50.0% | |
| ! | GGAGGCTGGTTCAAGTCAAA+TGG | - | chr4_2:4812301-4812320 | None:intergenic | 50.0% |
| AGGTCGAAAGCTTGAACAGG+AGG | - | chr4_2:4812319-4812338 | None:intergenic | 50.0% | |
| CCTCGTGAGCTTAACTCAGT+TGG | - | chr4_2:4813325-4813344 | None:intergenic | 50.0% | |
| CCAACTGAGTTAAGCTCACG+AGG | + | chr4_2:4813322-4813341 | Msa0584790:intron | 50.0% | |
| TTTGTTTGGGAGGGGAAGGA+AGG | + | chr4_2:4813435-4813454 | Msa0584790:intron | 50.0% | |
| TTGTTTGGGAGGGGAAGGAA+GGG | + | chr4_2:4813436-4813455 | Msa0584790:intron | 50.0% | |
| GTGTGTGTGTGTGTGTTTGG+AGG | - | chr4_2:4813570-4813589 | None:intergenic | 50.0% | |
| !!! | TTTTTTGTTTTGGGGGGGGG+GGG | - | chr4_2:4813592-4813611 | None:intergenic | 50.0% |
| TAAGCTGTGGCGCAAAGCAT+TGG | - | chr4_2:4814379-4814398 | None:intergenic | 50.0% | |
| TGCTGGCAGTTGAAAGAAGG+CGG | - | chr4_2:4814413-4814432 | None:intergenic | 50.0% | |
| CGATGCTGGCAGTTGAAAGA+AGG | - | chr4_2:4814416-4814435 | None:intergenic | 50.0% | |
| GTCATCAGCTTTCTTGACCG+CGG | + | chr4_2:4814553-4814572 | Msa0584790:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr4_2:4815117-4815136 | Msa0584790:intron | 50.0% | |
| AGACACGACCGAGTAGAAGT+GGG | - | chr4_2:4815303-4815322 | None:intergenic | 50.0% | |
| AAGACACGACCGAGTAGAAG+TGG | - | chr4_2:4815304-4815323 | None:intergenic | 50.0% | |
| TCTACTCGGTCGTGTCTTGA+TGG | + | chr4_2:4815306-4815325 | Msa0584790:intron | 50.0% | |
| GGACTAGGGCTATTCCAAGA+AGG | - | chr4_2:4815496-4815515 | None:intergenic | 50.0% | |
| ! | GAGAGAGAGAGAGGTGGATT+AGG | - | chr4_2:4816706-4816725 | None:intergenic | 50.0% |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr4_2:4817371-4817390 | None:intergenic | 50.0% | |
| TAGTGCTAGCTGCTACGGAA+AGG | - | chr4_2:4816798-4816817 | None:intergenic | 50.0% | |
| GTAGCAGCTAGCACTATGAG+TGG | + | chr4_2:4816802-4816821 | Msa0584790:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+CGG | + | chr4_2:4817371-4817390 | Msa0584790:intron | 50.0% | |
| ! | TCAGGCTGGTTATTTGGTGG+TGG | - | chr4_2:4812163-4812182 | None:intergenic | 50.0% |
| ! | GGTTCAGGCTGGTTATTTGG+TGG | - | chr4_2:4812166-4812185 | None:intergenic | 50.0% |
| ! | TCGGGTTCAGGCTGGTTATT+TGG | - | chr4_2:4820024-4820043 | None:intergenic | 50.0% |
| ! | GGTTGAGGCTGAGCATTTTC+GGG | - | chr4_2:4812187-4812206 | None:intergenic | 50.0% |
| !!! | GGTGGAGTTGGTGCATTTTG+TGG | - | chr4_2:4820063-4820082 | None:intergenic | 50.0% |
| ! | TGTGGAGGTGGTGCATTTTG+TGG | - | chr4_2:4812271-4812290 | None:intergenic | 50.0% |
| AATGGTTGCACATGTGGAGG+TGG | - | chr4_2:4812283-4812302 | None:intergenic | 50.0% | |
| ! | GGAGGCTGGTTCAAGTCAAA+TGG | - | chr4_2:4812301-4812320 | None:intergenic | 50.0% |
| TTGAGGTCGAAAGCTCGAAC+AGG | - | chr4_2:4820177-4820196 | None:intergenic | 50.0% | |
| ! | GGTGGAGCTGGTGCATTTTG+TGG | - | chr4_2:4812229-4812248 | None:intergenic | 55.0% |
| CGAAAGCTTGAACAGGAGGC+TGG | - | chr4_2:4812315-4812334 | None:intergenic | 55.0% | |
| AGGGGTCAGAGTTCGAACAC+CGG | - | chr4_2:4813279-4813298 | None:intergenic | 55.0% | |
| !! | AGGCTTTGTTTGGGAGGGGA+AGG | + | chr4_2:4813431-4813450 | Msa0584790:intron | 55.0% |
| GGGGTGTGTGTGTGTGTGTT+TGG | - | chr4_2:4813573-4813592 | None:intergenic | 55.0% | |
| GGGAAGGGAGATGAGGGTTT+GGG | - | chr4_2:4813756-4813775 | None:intergenic | 55.0% | |
| TTGGAGGGGAAGGGAGATGA+GGG | - | chr4_2:4813762-4813781 | None:intergenic | 55.0% | |
| TTTGGAGGGGAAGGGAGATG+AGG | - | chr4_2:4813763-4813782 | None:intergenic | 55.0% | |
| CATTGTGAGAACCTCCTCGC+CGG | + | chr4_2:4814082-4814101 | Msa0584790:intron | 55.0% | |
| !! | TCTTCTGTTGCTTTCCGGCG+AGG | - | chr4_2:4814099-4814118 | None:intergenic | 55.0% |
| !! | TCAGGCAATGTGGTGGGTGA+CGG | - | chr4_2:4814349-4814368 | None:intergenic | 55.0% |
| !! | CAAAGCATTGGACCGGTCTC+AGG | - | chr4_2:4814367-4814386 | None:intergenic | 55.0% |
| !! | TGTGGCGCAAAGCATTGGAC+CGG | - | chr4_2:4814374-4814393 | None:intergenic | 55.0% |
| CAGCTTTCTTGACCGCGGAT+TGG | + | chr4_2:4814558-4814577 | Msa0584790:intron | 55.0% | |
| GTCATGTCACGCCTAATCCG+AGG | - | chr4_2:4815137-4815156 | None:intergenic | 55.0% | |
| GTCAGTGTCCGTGTCGTGTT+CGG | + | chr4_2:4815212-4815231 | Msa0584790:intron | 55.0% | |
| CACAGACACCGAACACGACA+CGG | - | chr4_2:4815223-4815242 | None:intergenic | 55.0% | |
| GAGAGAGAGAGAGAGAGAGG+TGG | - | chr4_2:4816712-4816731 | None:intergenic | 55.0% | |
| TGCTAGCTGCTACGGAAAGG+AGG | - | chr4_2:4816795-4816814 | None:intergenic | 55.0% | |
| GAGAGAGAGAGAGAGAGAGC+GGG | + | chr4_2:4817372-4817391 | Msa0584790:intron | 55.0% | |
| AGAGAGAGAGAGAGAGAGCG+GGG | + | chr4_2:4817373-4817392 | Msa0584790:intron | 55.0% | |
| !!! | GAGCATTTTCGGGTTCAGGC+TGG | - | chr4_2:4820032-4820051 | None:intergenic | 55.0% |
| !!! | GGCTGAGCATTTTCGGGTTC+AGG | - | chr4_2:4820036-4820055 | None:intergenic | 55.0% |
| !! | GGTGCATTTTGTGGTGGAGC+TGG | - | chr4_2:4820117-4820136 | None:intergenic | 55.0% |
| ! | GGAGGTGGTGCATTTTGTGG+TGG | - | chr4_2:4812268-4812287 | None:intergenic | 55.0% |
| AGGTCGAAAGCTCGAACAGG+AGG | - | chr4_2:4820174-4820193 | None:intergenic | 55.0% | |
| GGAGGGGAAGGAAGGGCTTT+GGG | + | chr4_2:4813443-4813462 | Msa0584790:intron | 60.0% | |
| GAGGGGAAGGAAGGGCTTTG+GGG | + | chr4_2:4813444-4813463 | Msa0584790:intron | 60.0% | |
| GGGGAAGGGAGATGAGGGTT+TGG | - | chr4_2:4813757-4813776 | None:intergenic | 60.0% | |
| CGGCGAGGAGGTTCTCACAA+TGG | - | chr4_2:4814084-4814103 | None:intergenic | 60.0% | |
| !! | TCTGTTGCTTTCCGGCGAGG+AGG | - | chr4_2:4814096-4814115 | None:intergenic | 60.0% |
| !! | CGAAAGGGCGCCCATGAAAG+TGG | - | chr4_2:4814125-4814144 | None:intergenic | 60.0% |
| CCGGTCTCAGGCAATGTGGT+GGG | - | chr4_2:4814355-4814374 | None:intergenic | 60.0% | |
| CCCACCACATTGCCTGAGAC+CGG | + | chr4_2:4814352-4814371 | Msa0584790:intron | 60.0% | |
| ACCGGTCTCAGGCAATGTGG+TGG | - | chr4_2:4814356-4814375 | None:intergenic | 60.0% | |
| TGGACCGGTCTCAGGCAATG+TGG | - | chr4_2:4814359-4814378 | None:intergenic | 60.0% | |
| CGCCACAGCTTATCAGCAGC+AGG | + | chr4_2:4814387-4814406 | Msa0584790:intron | 60.0% | |
| GGCCTGCTGCTGATAAGCTG+TGG | - | chr4_2:4814392-4814411 | None:intergenic | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | + | chr4_2:4815123-4815142 | Msa0584790:intron | 60.0% | |
| GAGAGAGAGAGAGAGAGCGG+GGG | + | chr4_2:4817374-4817393 | Msa0584790:intron | 60.0% | |
| AGAGAGAGAGAGAGAGCGGG+GGG | + | chr4_2:4817375-4817394 | Msa0584790:intron | 60.0% | |
| CGAAAGCTCGAACAGGAGGC+TGG | - | chr4_2:4820170-4820189 | None:intergenic | 60.0% | |
| GGGAGGGGAAGGAAGGGCTT+TGG | + | chr4_2:4813442-4813461 | Msa0584790:intron | 65.0% | |
| GAGAGAGAGAGAGAGCGGGG+GGG | + | chr4_2:4817376-4817395 | Msa0584790:intron | 65.0% | |
| AGAGAGAGAGAGCGGGGGGG+AGG | + | chr4_2:4817379-4817398 | Msa0584790:intron | 70.0% | |
| GAGAGAGAGAGCGGGGGGGA+GGG | + | chr4_2:4817380-4817399 | Msa0584790:intron | 70.0% | |
| AGAGAGAGAGCGGGGGGGAG+GGG | + | chr4_2:4817381-4817400 | Msa0584790:intron | 70.0% | |
| GAGAGAGAGCGGGGGGGAGG+GGG | + | chr4_2:4817382-4817401 | Msa0584790:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 4812076 | 4820221 | 4812076 | ID=Msa0584790;Name=Msa0584790 |
| chr4_2 | mRNA | 4812076 | 4820221 | 4812076 | ID=Msa0584790-mRNA-1;Parent=Msa0584790;Name=Msa0584790-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|0|0|2|0|188 |
| chr4_2 | exon | 4812076 | 4812321 | 4812076 | ID=Msa0584790-mRNA-1:exon:1224;Parent=Msa0584790-mRNA-1 |
| chr4_2 | exon | 4819901 | 4820221 | 4819901 | ID=Msa0584790-mRNA-1:exon:1225;Parent=Msa0584790-mRNA-1 |
| chr4_2 | CDS | 4812076 | 4812321 | 4812076 | ID=Msa0584790-mRNA-1:cds;Parent=Msa0584790-mRNA-1 |
| chr4_2 | CDS | 4819901 | 4820221 | 4819901 | ID=Msa0584790-mRNA-1:cds;Parent=Msa0584790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
