Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585170 | XP_003605474.1 | 73.043 | 230 | 45 | 2 | 98 | 315 | 5 | 229 | 2.59e-107 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585170 | sp|Q9FJK3|AGL80_ARATH | 53.333 | 150 | 69 | 1 | 98 | 247 | 5 | 153 | 5.21e-41 | 148 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585170 | G7JM29 | 46.875 | 96 | 45 | 2 | 10 | 99 | 124 | 219 | 5.35e-11 | 72.4 |
| Msa0585170 | G7JM29 | 73.043 | 230 | 45 | 2 | 98 | 315 | 5 | 229 | 1.24e-107 | 322 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0585170 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585170 | MtrunA17_Chr4g0014031 | 73.043 | 230 | 45 | 2 | 98 | 315 | 5 | 229 | 2.38e-111 | 322 |
| Msa0585170 | MtrunA17_Chr4g0014031 | 46.875 | 96 | 45 | 2 | 10 | 99 | 124 | 219 | 1.03e-14 | 72.4 |
| Msa0585170 | MtrunA17_Chr4g0014131 | 70.954 | 241 | 35 | 2 | 97 | 315 | 4 | 231 | 5.52e-109 | 316 |
| Msa0585170 | MtrunA17_Chr4g0014131 | 49.000 | 100 | 39 | 4 | 10 | 99 | 124 | 221 | 1.09e-17 | 80.5 |
| Msa0585170 | MtrunA17_Chr4g0014321 | 58.150 | 227 | 86 | 1 | 98 | 315 | 5 | 231 | 7.24e-93 | 275 |
| Msa0585170 | MtrunA17_Chr8g0351751 | 58.025 | 243 | 77 | 4 | 98 | 315 | 5 | 247 | 1.78e-87 | 262 |
| Msa0585170 | MtrunA17_Chr4g0013041 | 62.051 | 195 | 66 | 2 | 94 | 288 | 1 | 187 | 4.91e-86 | 257 |
| Msa0585170 | MtrunA17_Chr4g0014121 | 81.046 | 153 | 29 | 0 | 98 | 250 | 33 | 185 | 1.04e-79 | 240 |
| Msa0585170 | MtrunA17_Chr3g0110131 | 47.679 | 237 | 99 | 4 | 98 | 312 | 5 | 238 | 1.87e-60 | 193 |
| Msa0585170 | MtrunA17_Chr3g0107381 | 44.595 | 222 | 109 | 3 | 98 | 315 | 5 | 216 | 1.61e-58 | 187 |
| Msa0585170 | MtrunA17_Chr2g0296831 | 72.034 | 118 | 33 | 0 | 98 | 215 | 5 | 122 | 7.19e-48 | 156 |
| Msa0585170 | MtrunA17_Chr5g0432691 | 46.000 | 150 | 80 | 1 | 98 | 247 | 5 | 153 | 8.97e-43 | 145 |
| Msa0585170 | MtrunA17_Chr3g0107331 | 46.309 | 149 | 79 | 1 | 98 | 246 | 4 | 151 | 1.90e-42 | 144 |
| Msa0585170 | MtrunA17_Chr3g0107461 | 41.830 | 153 | 89 | 0 | 97 | 249 | 4 | 156 | 4.74e-40 | 137 |
| Msa0585170 | MtrunA17_Chr3g0107351 | 44.000 | 150 | 83 | 1 | 98 | 247 | 4 | 152 | 2.77e-39 | 135 |
| Msa0585170 | MtrunA17_Chr2g0283941 | 39.306 | 173 | 104 | 1 | 98 | 269 | 5 | 177 | 1.98e-38 | 136 |
| Msa0585170 | MtrunA17_Chr5g0420351 | 43.421 | 152 | 84 | 2 | 98 | 249 | 5 | 154 | 2.23e-37 | 130 |
| Msa0585170 | MtrunA17_Chr3g0107361 | 42.000 | 150 | 86 | 1 | 98 | 247 | 4 | 152 | 6.55e-37 | 129 |
| Msa0585170 | MtrunA17_Chr3g0107341 | 43.333 | 150 | 84 | 1 | 98 | 247 | 4 | 152 | 1.59e-36 | 129 |
| Msa0585170 | MtrunA17_Chr1g0188681 | 40.523 | 153 | 87 | 3 | 98 | 249 | 5 | 154 | 1.78e-35 | 125 |
| Msa0585170 | MtrunA17_Chr3g0105791 | 44.444 | 126 | 70 | 0 | 122 | 247 | 1 | 126 | 3.60e-34 | 122 |
| Msa0585170 | MtrunA17_Chr4g0031421 | 44.444 | 126 | 70 | 0 | 122 | 247 | 1 | 126 | 9.30e-33 | 118 |
| Msa0585170 | MtrunA17_Chr1g0197461 | 38.816 | 152 | 91 | 2 | 98 | 249 | 4 | 153 | 1.94e-32 | 118 |
| Msa0585170 | MtrunA17_Chr1g0188661 | 42.763 | 152 | 85 | 2 | 98 | 249 | 5 | 154 | 9.79e-32 | 116 |
| Msa0585170 | MtrunA17_Chr7g0218151 | 42.105 | 152 | 86 | 2 | 98 | 249 | 5 | 154 | 3.17e-31 | 115 |
| Msa0585170 | MtrunA17_Chr3g0106421 | 34.973 | 183 | 111 | 3 | 122 | 299 | 1 | 180 | 4.31e-30 | 113 |
| Msa0585170 | MtrunA17_Chr1g0197261 | 38.776 | 147 | 88 | 2 | 98 | 244 | 5 | 149 | 4.74e-30 | 111 |
| Msa0585170 | MtrunA17_Chr1g0197321 | 36.667 | 150 | 94 | 1 | 98 | 247 | 5 | 153 | 6.14e-30 | 111 |
| Msa0585170 | MtrunA17_Chr1g0188651 | 42.105 | 152 | 84 | 2 | 98 | 249 | 5 | 152 | 7.19e-30 | 111 |
| Msa0585170 | MtrunA17_Chr4g0012761 | 40.789 | 152 | 88 | 2 | 98 | 249 | 5 | 154 | 1.61e-29 | 110 |
| Msa0585170 | MtrunA17_Chr1g0193311 | 42.105 | 152 | 86 | 2 | 98 | 249 | 5 | 154 | 2.35e-29 | 110 |
| Msa0585170 | MtrunA17_Chr2g0296861 | 36.184 | 152 | 96 | 1 | 99 | 250 | 6 | 156 | 2.44e-23 | 94.0 |
| Msa0585170 | MtrunA17_Chr7g0267601 | 41.176 | 119 | 70 | 0 | 104 | 222 | 14 | 132 | 3.08e-23 | 99.8 |
| Msa0585170 | MtrunA17_Chr4g0008701 | 41.176 | 119 | 70 | 0 | 104 | 222 | 14 | 132 | 5.43e-23 | 99.0 |
| Msa0585170 | MtrunA17_Chr3g0128721 | 33.582 | 134 | 89 | 0 | 104 | 237 | 14 | 147 | 9.45e-21 | 92.8 |
| Msa0585170 | MtrunA17_Chr3g0106501 | 32.812 | 128 | 86 | 0 | 122 | 249 | 1 | 128 | 2.16e-19 | 83.6 |
| Msa0585170 | MtrunA17_Chr2g0296851 | 59.259 | 81 | 33 | 0 | 167 | 247 | 1 | 81 | 2.44e-19 | 81.6 |
| Msa0585170 | MtrunA17_Chr6g0457851 | 35.455 | 110 | 64 | 4 | 97 | 200 | 14 | 122 | 3.59e-12 | 66.2 |
| Msa0585170 | MtrunA17_Chr6g0449861 | 35.455 | 110 | 64 | 4 | 97 | 200 | 12 | 120 | 7.57e-12 | 65.5 |
| Msa0585170 | MtrunA17_Chr1g0212151 | 32.727 | 110 | 67 | 3 | 97 | 200 | 4 | 112 | 1.03e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585170 | AT5G48670.1 | 53.333 | 150 | 69 | 1 | 98 | 247 | 5 | 153 | 5.30e-42 | 148 |
| Msa0585170 | AT1G65300.1 | 42.169 | 166 | 86 | 2 | 98 | 254 | 4 | 168 | 5.18e-39 | 139 |
| Msa0585170 | AT1G65330.1 | 42.515 | 167 | 88 | 2 | 97 | 256 | 3 | 168 | 4.35e-38 | 136 |
| Msa0585170 | AT5G26630.1 | 41.791 | 201 | 106 | 2 | 98 | 288 | 5 | 204 | 5.19e-37 | 132 |
| Msa0585170 | AT5G26650.1 | 42.105 | 152 | 87 | 1 | 98 | 249 | 3 | 153 | 1.24e-34 | 129 |
| Msa0585170 | AT5G27960.1 | 41.447 | 152 | 88 | 1 | 98 | 249 | 3 | 153 | 4.88e-34 | 127 |
| Msa0585170 | AT1G31630.1 | 35.542 | 166 | 98 | 3 | 98 | 256 | 4 | 167 | 3.00e-32 | 122 |
| Msa0585170 | AT5G27810.1 | 54.839 | 93 | 42 | 0 | 122 | 214 | 1 | 93 | 4.02e-30 | 111 |
| Msa0585170 | AT1G31640.1 | 37.584 | 149 | 91 | 2 | 98 | 246 | 4 | 150 | 2.62e-29 | 117 |
| Msa0585170 | AT2G28700.1 | 34.682 | 173 | 108 | 2 | 98 | 268 | 5 | 174 | 1.91e-27 | 109 |
| Msa0585170 | AT3G05860.2 | 35.065 | 154 | 99 | 1 | 98 | 251 | 5 | 157 | 2.78e-27 | 106 |
| Msa0585170 | AT3G05860.1 | 35.065 | 154 | 99 | 1 | 98 | 251 | 5 | 157 | 1.03e-26 | 106 |
| Msa0585170 | AT3G05860.3 | 35.065 | 154 | 99 | 1 | 98 | 251 | 5 | 157 | 1.07e-26 | 105 |
| Msa0585170 | AT1G22590.2 | 30.719 | 153 | 102 | 1 | 103 | 255 | 10 | 158 | 9.35e-23 | 93.2 |
| Msa0585170 | AT5G26580.1 | 33.533 | 167 | 86 | 3 | 98 | 254 | 5 | 156 | 1.24e-22 | 96.7 |
| Msa0585170 | AT5G06500.1 | 32.680 | 153 | 101 | 2 | 98 | 250 | 5 | 155 | 1.35e-17 | 80.9 |
| Msa0585170 | AT2G40210.1 | 38.400 | 125 | 76 | 1 | 98 | 222 | 5 | 128 | 1.38e-16 | 80.1 |
| Msa0585170 | AT5G58890.1 | 38.583 | 127 | 67 | 5 | 99 | 216 | 6 | 130 | 2.73e-16 | 78.2 |
| Msa0585170 | AT5G55690.1 | 42.466 | 73 | 35 | 2 | 99 | 164 | 6 | 78 | 6.36e-12 | 65.5 |
| Msa0585170 | AT5G55690.2 | 42.466 | 73 | 35 | 2 | 99 | 164 | 6 | 78 | 6.36e-12 | 65.5 |
| Msa0585170 | AT5G27090.1 | 33.000 | 100 | 64 | 2 | 90 | 188 | 15 | 112 | 9.78e-11 | 60.5 |
Find 83 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCTTCAAGGTAGTAAATT+AGG | 0.161446 | 4_2:-5706071 | None:intergenic |
| AGAAACAAAGAAAAGAAAAT+AGG | 0.231520 | 4_2:+5705724 | Msa0585170:CDS |
| CCCTTTGGTGAGATCAATTC+TGG | 0.238779 | 4_2:+5706041 | Msa0585170:CDS |
| GAGCGAAGAAATGGCAATTA+TGG | 0.251384 | 4_2:+5705920 | Msa0585170:CDS |
| TACCAATGTCCTTCAAATTA+TGG | 0.254451 | 4_2:-5705851 | None:intergenic |
| GACCATAATTTGAAGGATAT+TGG | 0.307693 | 4_2:+5701182 | Msa0585170:intron |
| AAGAAAGGGTCTATTGAAAA+AGG | 0.312767 | 4_2:+5705491 | Msa0585170:CDS |
| ATCTCTGGCTGAGGCTCATA+AGG | 0.350996 | 4_2:-5705567 | None:intergenic |
| AAAATGTCATCACCATTAAT+AGG | 0.355958 | 4_2:-5705963 | None:intergenic |
| ATGAGCCTCAGCCAGAGATT+TGG | 0.374512 | 4_2:+5705571 | Msa0585170:CDS |
| TTTGCAAAGTCAATTATTGA+TGG | 0.379269 | 4_2:+5705983 | Msa0585170:CDS |
| GCCCTAATTTACTACCTTGA+AGG | 0.380748 | 4_2:+5706069 | Msa0585170:CDS |
| TATGCAAACTCAATTATTGA+TGG | 0.382515 | 4_2:+5701322 | Msa0585170:CDS |
| TCCTTCAAGGTAGTAAATTA+GGG | 0.396741 | 4_2:-5706070 | None:intergenic |
| GAAGGACATTGGTAGACGTT+TGG | 0.410243 | 4_2:+5705860 | Msa0585170:CDS |
| TCTGGTGAAGGCCAAATCTC+TGG | 0.413104 | 4_2:-5705582 | None:intergenic |
| GAAGGATATTGGTAGACGTT+TGG | 0.415968 | 4_2:+5701193 | Msa0585170:intron |
| GAAACAAAGAAAAGAAAATA+GGG | 0.419680 | 4_2:+5705725 | Msa0585170:CDS |
| CCGCCATTTCGAGTTGAACT+TGG | 0.420899 | 4_2:-5701247 | None:intergenic |
| AGCGAAGAAATGGCAATTAT+GGG | 0.425600 | 4_2:+5705921 | Msa0585170:CDS |
| AGCATCTAGGAGCGAAGAAA+TGG | 0.428793 | 4_2:+5705911 | Msa0585170:CDS |
| TGCATATAGGAGTGAAGAAA+TGG | 0.437741 | 4_2:+5701295 | Msa0585170:CDS |
| TCAATTATTGATGGAATCAA+TGG | 0.440136 | 4_2:+5701331 | Msa0585170:CDS |
| GTTGATTGACCATAATTTGA+AGG | 0.445081 | 4_2:+5705842 | Msa0585170:CDS |
| GATGCTGCTGGAGGTGGTAG+TGG | 0.453710 | 4_2:-5705894 | None:intergenic |
| AAACCAAGTTCAACTCGAAA+TGG | 0.457744 | 4_2:+5701244 | Msa0585170:CDS |
| CTCCTAGATGCTGCTGGAGG+TGG | 0.459401 | 4_2:-5705900 | None:intergenic |
| GGTAGACGTTTGGAAGTGTT+TGG | 0.463590 | 4_2:+5701203 | Msa0585170:CDS |
| CTCATAAGGGCCATACACTA+TGG | 0.468858 | 4_2:-5705553 | None:intergenic |
| ATCATACAAGAAAAGAAGAA+AGG | 0.473094 | 4_2:+5705476 | Msa0585170:CDS |
| CTTGACACAAAGGGTTCTGA+AGG | 0.478789 | 4_2:+5705686 | Msa0585170:CDS |
| TCAATTATTGATGGACTCAA+TGG | 0.482426 | 4_2:+5705992 | Msa0585170:CDS |
| TTGATTTGAGTTATCTTACT+TGG | 0.482489 | 4_2:+5705820 | Msa0585170:CDS |
| CATGTTGGGATACCTATTAA+TGG | 0.485702 | 4_2:+5705951 | Msa0585170:CDS |
| TCTTCGCTCCTAGATGCTGC+TGG | 0.487238 | 4_2:-5705906 | None:intergenic |
| TTATGGGTCATGGACATGTT+GGG | 0.500968 | 4_2:+5705937 | Msa0585170:CDS |
| CCAGAATTGACCTCACCAAA+TGG | 0.504570 | 4_2:-5701380 | None:intergenic |
| CACGAAGTCTAGTTGCATAT+AGG | 0.505525 | 4_2:+5701282 | Msa0585170:CDS |
| TGCGGCATCATTGACAATGA+AGG | 0.507200 | 4_2:-5705445 | None:intergenic |
| AGCAGCATCATTGACAATGA+AGG | 0.509472 | 4_2:-5698724 | None:intergenic |
| GTGCAAAACACAGTGCCATT+TGG | 0.513770 | 4_2:+5701365 | Msa0585170:CDS |
| ATTATGGGTCATGGACATGT+TGG | 0.516074 | 4_2:+5705936 | Msa0585170:CDS |
| AGAGACTTTCTTGACACAAA+GGG | 0.517022 | 4_2:+5705677 | Msa0585170:CDS |
| GACCATAATTTGAAGGACAT+TGG | 0.517963 | 4_2:+5705849 | Msa0585170:CDS |
| GAAATGGCAATTATGGGTCA+TGG | 0.521926 | 4_2:+5705927 | Msa0585170:CDS |
| GGACATTGGTAGACGTTTGG+CGG | 0.524285 | 4_2:+5705863 | Msa0585170:CDS |
| TTTGTGTCAAGAAAGTCTCT+TGG | 0.525855 | 4_2:-5705674 | None:intergenic |
| TCATACAAGAAAAGAAGAAA+GGG | 0.526600 | 4_2:+5705477 | Msa0585170:CDS |
| TAGCACCCTATGTGGTATTG+AGG | 0.529543 | 4_2:+5698779 | Msa0585170:CDS |
| CTATATGCAACTAGACTTCG+TGG | 0.536649 | 4_2:-5701281 | None:intergenic |
| TACCACCTCCAGCAGCATCT+AGG | 0.540428 | 4_2:+5705898 | Msa0585170:CDS |
| ATATCTCATTGTCTCAATGA+AGG | 0.546787 | 4_2:+5705768 | Msa0585170:CDS |
| CCAGAATTGATCTCACCAAA+GGG | 0.554343 | 4_2:-5706041 | None:intergenic |
| GTGCAAGAGACAGTGCCCTT+TGG | 0.557727 | 4_2:+5706026 | Msa0585170:CDS |
| GAAGCCTGTGCCATAGTGTA+TGG | 0.559714 | 4_2:+5705543 | Msa0585170:CDS |
| GAAGGCCAAATCTCTGGCTG+AGG | 0.560020 | 4_2:-5705576 | None:intergenic |
| ACAAGCCTCAATACCACATA+GGG | 0.561401 | 4_2:-5698784 | None:intergenic |
| TCTCTGGCTGAGGCTCATAA+GGG | 0.571102 | 4_2:-5705566 | None:intergenic |
| GAGATTTGGCCTTCACCAGA+GGG | 0.580805 | 4_2:+5705585 | Msa0585170:CDS |
| TCCAGAATTGATCTCACCAA+AGG | 0.590517 | 4_2:-5706042 | None:intergenic |
| CATCATTGACAATGAAGGCA+TGG | 0.601299 | 4_2:-5698719 | None:intergenic |
| ACAGGCTTCAATGCCACAGA+GGG | 0.601811 | 4_2:-5705529 | None:intergenic |
| GATTTGGCCTTCACCAGAGG+GGG | 0.601928 | 4_2:+5705587 | Msa0585170:CDS |
| TCATTGTCAATGATGCTGCT+AGG | 0.603132 | 4_2:+5698727 | Msa0585170:CDS |
| CTTGTATGATTCTTTCCTTG+CGG | 0.605657 | 4_2:-5705463 | None:intergenic |
| TTGATGGACTCAATGGTGGC+TGG | 0.607204 | 4_2:+5705999 | Msa0585170:CDS |
| AAGAGACTTTCTTGACACAA+AGG | 0.607804 | 4_2:+5705676 | Msa0585170:CDS |
| TTGATGGAATCAATGGTGGC+TGG | 0.615022 | 4_2:+5701338 | Msa0585170:CDS |
| AGAGATTTGGCCTTCACCAG+AGG | 0.617598 | 4_2:+5705584 | Msa0585170:CDS |
| CACAAGCCTCAATACCACAT+AGG | 0.619824 | 4_2:-5698785 | None:intergenic |
| GTTGACATTAGCACCCTATG+TGG | 0.627144 | 4_2:+5698771 | Msa0585170:CDS |
| CCAAGTTCAACTCGAAATGG+CGG | 0.631061 | 4_2:+5701247 | Msa0585170:CDS |
| AGGGCCATACACTATGGCAC+AGG | 0.641363 | 4_2:-5705547 | None:intergenic |
| AAACACAGTGCCATTTGGTG+AGG | 0.656629 | 4_2:+5701370 | Msa0585170:CDS |
| ATTATTGATGGAATCAATGG+TGG | 0.663823 | 4_2:+5701334 | Msa0585170:CDS |
| TCATTGTCAATGATGCCGCA+AGG | 0.664783 | 4_2:+5705448 | Msa0585170:CDS |
| ATTATTGATGGACTCAATGG+TGG | 0.666274 | 4_2:+5705995 | Msa0585170:CDS |
| TCGCTCCTAGATGCTGCTGG+AGG | 0.676090 | 4_2:-5705903 | None:intergenic |
| GCTGAACTTAGCACCCTCTG+TGG | 0.677042 | 4_2:+5705516 | Msa0585170:CDS |
| TGTGCACGACAATATGTCAA+CGG | 0.688304 | 4_2:+5705797 | Msa0585170:CDS |
| CACAGGCTTCAATGCCACAG+AGG | 0.696692 | 4_2:-5705530 | None:intergenic |
| AGATTTGGCCTTCACCAGAG+GGG | 0.703414 | 4_2:+5705586 | Msa0585170:CDS |
| TATGCAACTAGACTTCGTGG+TGG | 0.773276 | 4_2:-5701278 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAATAAAACAAAAT+AGG | + | chr4_2:5699634-5699653 | Msa0585170:intron | 10.0% |
| !! | GAAAAAAATAAAACAAAATA+GGG | + | chr4_2:5699635-5699654 | Msa0585170:intron | 10.0% |
| !! | TATATATAAATAGTTATACA+TGG | + | chr4_2:5699768-5699787 | Msa0585170:intron | 10.0% |
| !! | CATTAAATAATTTATGTATT+TGG | - | chr4_2:5702242-5702261 | None:intergenic | 10.0% |
| !!! | TTTTGGATTTAAAAATAAAA+AGG | + | chr4_2:5702471-5702490 | Msa0585170:intron | 10.0% |
| !! | TCTTATTAAATTTAGTTAAA+TGG | - | chr4_2:5704912-5704931 | None:intergenic | 10.0% |
| !! | AAGAATGTTAACAAAAATAA+AGG | + | chr4_2:5700264-5700283 | Msa0585170:intron | 15.0% |
| !! | TGAAAAGAAAGAAAAAAAAT+GGG | - | chr4_2:5701007-5701026 | None:intergenic | 15.0% |
| !! | ATGAAAAGAAAGAAAAAAAA+TGG | - | chr4_2:5701008-5701027 | None:intergenic | 15.0% |
| !!! | AGTCCTAATTTTTTATTTTA+TGG | + | chr4_2:5701467-5701486 | Msa0585170:intron | 15.0% |
| !! | TCACCATAAAATAAAAAATT+AGG | - | chr4_2:5701473-5701492 | None:intergenic | 15.0% |
| !!! | TAGTTTTTTAAACAATTTGT+AGG | + | chr4_2:5701495-5701514 | Msa0585170:intron | 15.0% |
| !! | TATTATGAAAAGAAAAAGAA+AGG | + | chr4_2:5701692-5701711 | Msa0585170:intron | 15.0% |
| !! | ATTATGAAAAGAAAAAGAAA+GGG | + | chr4_2:5701693-5701712 | Msa0585170:intron | 15.0% |
| !!! | TTTTTTTAATGTTAAGCTAT+TGG | + | chr4_2:5701966-5701985 | Msa0585170:intron | 15.0% |
| !!! | ATAATTTATGTATTTGGTTT+AGG | - | chr4_2:5702236-5702255 | None:intergenic | 15.0% |
| !! | GATTTAAAAATAAAAAGGTT+CGG | + | chr4_2:5702476-5702495 | Msa0585170:intron | 15.0% |
| !!! | TAAAATCACTATTACTTTTA+TGG | - | chr4_2:5704290-5704309 | None:intergenic | 15.0% |
| !! | TCATCTATATATGTAATTTA+GGG | - | chr4_2:5704348-5704367 | None:intergenic | 15.0% |
| !! | TAAATTACATATATAGATGA+GGG | + | chr4_2:5704348-5704367 | Msa0585170:intron | 15.0% |
| !! | ATTAAGTAATGAAAGATAAT+AGG | + | chr4_2:5705271-5705290 | Msa0585170:intron | 15.0% |
| !! | TAATTATAATTGTTTACGAT+AGG | + | chr4_2:5705347-5705366 | Msa0585170:intron | 15.0% |
| !! | TAGAAAACATAATAGTTAGA+TGG | - | chr4_2:5698904-5698923 | None:intergenic | 20.0% |
| !!! | ATCTAACTATTATGTTTTCT+AGG | + | chr4_2:5698903-5698922 | Msa0585170:intron | 20.0% |
| !! | TTCGTATTTGTATTATGTAT+AGG | - | chr4_2:5698861-5698880 | None:intergenic | 20.0% |
| !! | ATAATCAACATAATCAATGA+TGG | + | chr4_2:5699560-5699579 | Msa0585170:intron | 20.0% |
| !! | AATACTCAATATCTTAATGA+GGG | + | chr4_2:5699671-5699690 | Msa0585170:intron | 20.0% |
| !! | TTATGTCATATATAAATTCG+CGG | - | chr4_2:5699748-5699767 | None:intergenic | 20.0% |
| !!! | AGAACATTCATTTTCTTATA+TGG | - | chr4_2:5700066-5700085 | None:intergenic | 20.0% |
| !! | TTTGTAGATGTTTATAACTT+AGG | - | chr4_2:5700109-5700128 | None:intergenic | 20.0% |
| !!! | TATTTTTTTGTTGATCAGAT+CGG | - | chr4_2:5700202-5700221 | None:intergenic | 20.0% |
| !! | TCTGATCAACAAAAAAATAA+AGG | + | chr4_2:5700203-5700222 | Msa0585170:intron | 20.0% |
| !! | AAAATGCACAAATCTAATTT+AGG | + | chr4_2:5700620-5700639 | Msa0585170:intron | 20.0% |
| !! | AAATGCACAAATCTAATTTA+GGG | + | chr4_2:5700621-5700640 | Msa0585170:intron | 20.0% |
| !! | AATTTGAATAATCAATTCCT+TGG | + | chr4_2:5700694-5700713 | Msa0585170:intron | 20.0% |
| !!! | TTTGCTTGTTATTTGTTAAT+GGG | - | chr4_2:5700733-5700752 | None:intergenic | 20.0% |
| !!! | ATTTGCTTGTTATTTGTTAA+TGG | - | chr4_2:5700734-5700753 | None:intergenic | 20.0% |
| !!! | ATGATTTGAGTTATCTTTTT+TGG | + | chr4_2:5701153-5701172 | Msa0585170:intron | 20.0% |
| !! | TACTAAGTTAATAGTCTATT+AGG | + | chr4_2:5701920-5701939 | Msa0585170:intron | 20.0% |
| !! | ATGTTAACAATATAGCTAAT+CGG | - | chr4_2:5702040-5702059 | None:intergenic | 20.0% |
| !!! | GTAAATTGTTTCTTGTAAAT+AGG | + | chr4_2:5702272-5702291 | Msa0585170:intron | 20.0% |
| !!! | TTATGTGAATTTGTTTTGTT+CGG | + | chr4_2:5702317-5702336 | Msa0585170:intron | 20.0% |
| !!! | TCTTTTGGTTTTTTTTTGAT+TGG | + | chr4_2:5702618-5702637 | Msa0585170:intron | 20.0% |
| !! | AATCAAAAAAAATCAAAAGC+GGG | - | chr4_2:5702756-5702775 | None:intergenic | 20.0% |
| !! | CAATCAAAAAAAATCAAAAG+CGG | - | chr4_2:5702757-5702776 | None:intergenic | 20.0% |
| !! | ATAAATCACAAGAATCAAAA+GGG | - | chr4_2:5702857-5702876 | None:intergenic | 20.0% |
| !! | AATAAATCACAAGAATCAAA+AGG | - | chr4_2:5702858-5702877 | None:intergenic | 20.0% |
| !! | CAATCAATTAGAAGAATAAA+AGG | - | chr4_2:5702891-5702910 | None:intergenic | 20.0% |
| !! | TTTGTTAATATACATGTTGT+TGG | + | chr4_2:5703305-5703324 | Msa0585170:intron | 20.0% |
| !!! | AATTAGGATCTCATTTTATT+AGG | - | chr4_2:5703415-5703434 | None:intergenic | 20.0% |
| !!! | TTTATTCATAACTTAAGTTG+TGG | - | chr4_2:5703855-5703874 | None:intergenic | 20.0% |
| !! | ATGAATAAAAAACTACACAT+TGG | + | chr4_2:5703866-5703885 | Msa0585170:intron | 20.0% |
| !!! | TGGAAAAGTTTATTTTCTTA+TGG | - | chr4_2:5704101-5704120 | None:intergenic | 20.0% |
| !!! | TTTTATCTACATATTCTAGA+CGG | - | chr4_2:5704131-5704150 | None:intergenic | 20.0% |
| !! | ACATTTACTTTACAAACTAA+TGG | - | chr4_2:5704319-5704338 | None:intergenic | 20.0% |
| !!! | TAGTTTGTAAAGTAAATGTA+AGG | + | chr4_2:5704320-5704339 | Msa0585170:intron | 20.0% |
| !! | CATCTATATATGTAATTTAG+GGG | - | chr4_2:5704347-5704366 | None:intergenic | 20.0% |
| !! | CTCATCTATATATGTAATTT+AGG | - | chr4_2:5704349-5704368 | None:intergenic | 20.0% |
| !! | CTAAATTACATATATAGATG+AGG | + | chr4_2:5704347-5704366 | Msa0585170:intron | 20.0% |
| !! | TTTAAACCAATAATGAGTTT+AGG | + | chr4_2:5705073-5705092 | Msa0585170:intron | 20.0% |
| !!! | TCTTTTATTCTTTCAGTTAA+CGG | - | chr4_2:5705103-5705122 | None:intergenic | 20.0% |
| !! | GATTGTTAAGAAAAATGTAA+GGG | + | chr4_2:5705231-5705250 | Msa0585170:intron | 20.0% |
| !! | TCGTAAACAATTATAATTAC+AGG | - | chr4_2:5705346-5705365 | None:intergenic | 20.0% |
| !! | AGAAACAAAGAAAAGAAAAT+AGG | + | chr4_2:5705724-5705743 | Msa0585170:CDS | 20.0% |
| !! | GAAACAAAGAAAAGAAAATA+GGG | + | chr4_2:5705725-5705744 | Msa0585170:CDS | 20.0% |
| !! | GTATTATGTATAGCTTTTTG+AGG | + | chr4_2:5698870-5698889 | Msa0585170:intron | 25.0% |
| ! | TTACTACTGAAGATTGAAAA+AGG | + | chr4_2:5698979-5698998 | Msa0585170:intron | 25.0% |
| ! | TTGTTACAAAATACAGAGAT+TGG | + | chr4_2:5699110-5699129 | Msa0585170:intron | 25.0% |
| ! | TGTTACAAAATACAGAGATT+GGG | + | chr4_2:5699111-5699130 | Msa0585170:intron | 25.0% |
| ! | TTACTACTGAAGATTGAAAA+AGG | - | chr4_2:5698979-5698998 | None:intergenic | 25.0% |
| !! | ATCTAACTATTCTGTTTTCT+AGG | - | chr4_2:5699496-5699515 | None:intergenic | 25.0% |
| ! | CAATACTCAATATCTTAATG+AGG | + | chr4_2:5699670-5699689 | Msa0585170:intron | 25.0% |
| ! | GTTATACATGGAAATAAAAG+AGG | + | chr4_2:5699780-5699799 | Msa0585170:intron | 25.0% |
| ! | TTAATTACTTTCATTCTGTG+TGG | - | chr4_2:5700361-5700380 | None:intergenic | 25.0% |
| ! | AGGGTTTCAAAAATCAAAAT+TGG | + | chr4_2:5700640-5700659 | Msa0585170:intron | 25.0% |
| ! | GGGTTTCAAAAATCAAAATT+GGG | + | chr4_2:5700641-5700660 | Msa0585170:intron | 25.0% |
| ! | GGTTTCAAAAATCAAAATTG+GGG | + | chr4_2:5700642-5700661 | Msa0585170:intron | 25.0% |
| !!! | TTGTTATTTGTTAATGGGTA+GGG | - | chr4_2:5700728-5700747 | None:intergenic | 25.0% |
| ! | ATAGAGAAAAACAAACTTGA+TGG | + | chr4_2:5700780-5700799 | Msa0585170:intron | 25.0% |
| !!! | TTTTTTCTTTCTTTTCATGC+AGG | + | chr4_2:5701010-5701029 | Msa0585170:intron | 25.0% |
| ! | TACCAATATCCTTCAAATTA+TGG | - | chr4_2:5701187-5701206 | None:intergenic | 25.0% |
| ! | TATGCAAACTCAATTATTGA+TGG | + | chr4_2:5701322-5701341 | Msa0585170:CDS | 25.0% |
| ! | TCAATTATTGATGGAATCAA+TGG | + | chr4_2:5701331-5701350 | Msa0585170:CDS | 25.0% |
| ! | TACTTGCATAAAAATCCTAT+TGG | + | chr4_2:5701555-5701574 | Msa0585170:intron | 25.0% |
| !!! | GAATGTATGTTTTTAGATGA+TGG | + | chr4_2:5701727-5701746 | Msa0585170:intron | 25.0% |
| !!! | TGTTTTTAGATGATGGATAT+AGG | + | chr4_2:5701734-5701753 | Msa0585170:intron | 25.0% |
| !! | AAAAAAAGTGAAGTGAGTTT+TGG | + | chr4_2:5701873-5701892 | Msa0585170:intron | 25.0% |
| !! | AAAAAAGTGAAGTGAGTTTT+GGG | + | chr4_2:5701874-5701893 | Msa0585170:intron | 25.0% |
| ! | AACAAAGAGACTAAAAAAGA+CGG | - | chr4_2:5702010-5702029 | None:intergenic | 25.0% |
| !! | GTCAATTTTCTCTTGTAAAT+AGG | - | chr4_2:5702173-5702192 | None:intergenic | 25.0% |
| ! | TTTAATGAGTTCTTCACATA+TGG | + | chr4_2:5702512-5702531 | Msa0585170:intron | 25.0% |
| !!! | GTGTTGGTTTTTTTTTATCT+TGG | + | chr4_2:5702653-5702672 | Msa0585170:intron | 25.0% |
| ! | AATCATTCAGAAGAATCAAA+AGG | - | chr4_2:5702826-5702845 | None:intergenic | 25.0% |
| !!! | AACTTACTAAGTTTAGTTTG+AGG | + | chr4_2:5703187-5703206 | Msa0585170:intron | 25.0% |
| ! | TATCAACAAGAAACATTATG+AGG | - | chr4_2:5703267-5703286 | None:intergenic | 25.0% |
| ! | CATAATGTTTCTTGTTGATA+AGG | + | chr4_2:5703267-5703286 | Msa0585170:intron | 25.0% |
| !!! | TTCTTGTTGATAAGGTTTTT+TGG | + | chr4_2:5703275-5703294 | Msa0585170:intron | 25.0% |
| ! | TAATATACATGTTGTTGGTA+AGG | + | chr4_2:5703310-5703329 | Msa0585170:intron | 25.0% |
| ! | GAGAGAAATTTATAGATTTC+AGG | + | chr4_2:5703568-5703587 | Msa0585170:intron | 25.0% |
| ! | AGAAATTTATAGATTTCAGG+AGG | + | chr4_2:5703571-5703590 | Msa0585170:intron | 25.0% |
| ! | TTGTTTCAGTATCATGTTTA+TGG | - | chr4_2:5703621-5703640 | None:intergenic | 25.0% |
| !! | AGTTTTTCTAATCCTAGTTA+CGG | - | chr4_2:5703725-5703744 | None:intergenic | 25.0% |
| !!! | AAAGTTTATTTTCTTATGGC+TGG | - | chr4_2:5704097-5704116 | None:intergenic | 25.0% |
| !!! | TTTTTTTCATTTCCCATTGT+TGG | + | chr4_2:5704154-5704173 | Msa0585170:intron | 25.0% |
| !!! | TTTTTTCATTTCCCATTGTT+GGG | + | chr4_2:5704155-5704174 | Msa0585170:intron | 25.0% |
| ! | TGACATTCTTATATTCACAT+AGG | - | chr4_2:5704447-5704466 | None:intergenic | 25.0% |
| ! | TGAATATAAGAATGTCAAGA+TGG | + | chr4_2:5704450-5704469 | Msa0585170:intron | 25.0% |
| ! | TTAGGAAGTGATAAATACTA+CGG | + | chr4_2:5704480-5704499 | Msa0585170:intron | 25.0% |
| ! | GTTAAACACTTAAACTAGAA+TGG | + | chr4_2:5704531-5704550 | Msa0585170:intron | 25.0% |
| !! | TGTTGTTCATTATTGCATTT+TGG | - | chr4_2:5704626-5704645 | None:intergenic | 25.0% |
| ! | AATGCAATAATGAACAACAA+AGG | + | chr4_2:5704627-5704646 | Msa0585170:intron | 25.0% |
| ! | ATTTAATAGAGCAAATAGTG+TGG | + | chr4_2:5704937-5704956 | Msa0585170:intron | 25.0% |
| ! | TTTAATAGAGCAAATAGTGT+GGG | + | chr4_2:5704938-5704957 | Msa0585170:intron | 25.0% |
| ! | AAAACACACGATTTAGTAAA+AGG | + | chr4_2:5704976-5704995 | Msa0585170:intron | 25.0% |
| ! | AAACACACGATTTAGTAAAA+GGG | + | chr4_2:5704977-5704996 | Msa0585170:intron | 25.0% |
| !!! | ATTCATTTTTACGCCTTATA+CGG | - | chr4_2:5705167-5705186 | None:intergenic | 25.0% |
| ! | GGATTGTTAAGAAAAATGTA+AGG | + | chr4_2:5705230-5705249 | Msa0585170:intron | 25.0% |
| !! | ATGATAACGATGAATAAGAA+AGG | + | chr4_2:5705298-5705317 | Msa0585170:intron | 25.0% |
| !! | TGATAACGATGAATAAGAAA+GGG | + | chr4_2:5705299-5705318 | Msa0585170:intron | 25.0% |
| ! | ATCATACAAGAAAAGAAGAA+AGG | + | chr4_2:5705476-5705495 | Msa0585170:CDS | 25.0% |
| ! | TCATACAAGAAAAGAAGAAA+GGG | + | chr4_2:5705477-5705496 | Msa0585170:CDS | 25.0% |
| !! | TTGATTTGAGTTATCTTACT+TGG | + | chr4_2:5705820-5705839 | Msa0585170:CDS | 25.0% |
| ! | AAAATGTCATCACCATTAAT+AGG | - | chr4_2:5705966-5705985 | None:intergenic | 25.0% |
| ! | TTTGCAAAGTCAATTATTGA+TGG | + | chr4_2:5705983-5706002 | Msa0585170:CDS | 25.0% |
| ! | GTAATGTTTTCTTTTCCACA+AGG | - | chr4_2:5698947-5698966 | None:intergenic | 30.0% |
| ! | CTTGCATATATTTTCCTTGT+GGG | - | chr4_2:5698930-5698949 | None:intergenic | 30.0% |
| TATCTGTCAAAAAACTCTCA+TGG | - | chr4_2:5699587-5699606 | None:intergenic | 30.0% | |
| !!! | ATGAGAGTTTTTTGACAGAT+AGG | + | chr4_2:5699586-5699605 | Msa0585170:intron | 30.0% |
| !!! | TGAGAGTTTTTTGACAGATA+GGG | + | chr4_2:5699587-5699606 | Msa0585170:intron | 30.0% |
| TCAATATCTTAATGAGGGTA+AGG | + | chr4_2:5699676-5699695 | Msa0585170:intron | 30.0% | |
| ATATTTAGCACGCTATTATC+AGG | - | chr4_2:5699859-5699878 | None:intergenic | 30.0% | |
| !! | TTATATGGCTTTGATATTGC+CGG | - | chr4_2:5700051-5700070 | None:intergenic | 30.0% |
| ! | GTGATTTTTGTTGAGAGAAT+TGG | - | chr4_2:5700322-5700341 | None:intergenic | 30.0% |
| TCTGTGTGGTTATACTTATA+CGG | - | chr4_2:5700347-5700366 | None:intergenic | 30.0% | |
| !! | CTTGTTATTTGTTAATGGGT+AGG | - | chr4_2:5700729-5700748 | None:intergenic | 30.0% |
| GACCATAATTTGAAGGATAT+TGG | + | chr4_2:5701182-5701201 | Msa0585170:intron | 30.0% | |
| ATTATTGATGGAATCAATGG+TGG | + | chr4_2:5701334-5701353 | Msa0585170:CDS | 30.0% | |
| CAATTACATGATTTCCTTCA+AGG | - | chr4_2:5701425-5701444 | None:intergenic | 30.0% | |
| GTACATAGAACTTAAGCAAT+AGG | - | chr4_2:5701530-5701549 | None:intergenic | 30.0% | |
| ATTGCTTAAGTTCTATGTAC+TGG | + | chr4_2:5701530-5701549 | Msa0585170:intron | 30.0% | |
| AAAAGAAAAAGAAAGGGTTG+TGG | + | chr4_2:5701699-5701718 | Msa0585170:intron | 30.0% | |
| ! | GGTTTTCAATCTTAACTGTT+GGG | - | chr4_2:5701769-5701788 | None:intergenic | 30.0% |
| TGCAGTTAGTATTCATATAC+AGG | + | chr4_2:5701826-5701845 | Msa0585170:intron | 30.0% | |
| AGTTAGTATTCATATACAGG+TGG | + | chr4_2:5701829-5701848 | Msa0585170:intron | 30.0% | |
| GTTAGTATTCATATACAGGT+GGG | + | chr4_2:5701830-5701849 | Msa0585170:intron | 30.0% | |
| !!! | GAGTTTTGGGTTTAAGTTAT+TGG | + | chr4_2:5701887-5701906 | Msa0585170:intron | 30.0% |
| ! | TAAACATTCCCAAACTTGTT+GGG | - | chr4_2:5702123-5702142 | None:intergenic | 30.0% |
| ! | TTTTCTCTTGTAAATAGGAC+CGG | - | chr4_2:5702168-5702187 | None:intergenic | 30.0% |
| ! | TTGTTTCTTGTAAATAGGAC+CGG | + | chr4_2:5702277-5702296 | Msa0585170:intron | 30.0% |
| ATTTCGATACCCATTAGATT+TGG | + | chr4_2:5702420-5702439 | Msa0585170:intron | 30.0% | |
| TCAAATGCACCAAATCTAAT+GGG | - | chr4_2:5702432-5702451 | None:intergenic | 30.0% | |
| TTCAAATGCACCAAATCTAA+TGG | - | chr4_2:5702433-5702452 | None:intergenic | 30.0% | |
| !!! | TCCTTGTTCTTGTTTTGTTT+TGG | + | chr4_2:5702454-5702473 | Msa0585170:intron | 30.0% |
| TCCAAAACAAAACAAGAACA+AGG | - | chr4_2:5702458-5702477 | None:intergenic | 30.0% | |
| !! | AAAAGCACCATTTGAATTTC+TGG | + | chr4_2:5702564-5702583 | Msa0585170:intron | 30.0% |
| ! | CTTTAATTGTCTCTCTCTTT+TGG | + | chr4_2:5702603-5702622 | Msa0585170:intron | 30.0% |
| !!! | TTGGTTGTTTTTCTTAGTGT+TGG | + | chr4_2:5702637-5702656 | Msa0585170:intron | 30.0% |
| ATCAACCTGATGAATCAATA+GGG | - | chr4_2:5702726-5702745 | None:intergenic | 30.0% | |
| AATCAACCTGATGAATCAAT+AGG | - | chr4_2:5702727-5702746 | None:intergenic | 30.0% | |
| TCAATCAGAAGAATCAAGAA+GGG | - | chr4_2:5702790-5702809 | None:intergenic | 30.0% | |
| ATCAATCAGAAGAATCAAGA+AGG | - | chr4_2:5702791-5702810 | None:intergenic | 30.0% | |
| ATTCAGAAGAATCAAAAGGA+GGG | - | chr4_2:5702822-5702841 | None:intergenic | 30.0% | |
| ACGAAACAGAAGAATCAAAA+GGG | - | chr4_2:5702935-5702954 | None:intergenic | 30.0% | |
| AACGAAACAGAAGAATCAAA+AGG | - | chr4_2:5702936-5702955 | None:intergenic | 30.0% | |
| ATAGAAGAACCAATAGAAAG+AGG | - | chr4_2:5702962-5702981 | None:intergenic | 30.0% | |
| TTTGACATTGTTCTTCTGAT+TGG | + | chr4_2:5703017-5703036 | Msa0585170:intron | 30.0% | |
| !! | GCTAATGTAGCTTATTTTCA+GGG | + | chr4_2:5703144-5703163 | Msa0585170:intron | 30.0% |
| !!! | GTTGATAAGGTTTTTTGGTA+AGG | + | chr4_2:5703280-5703299 | Msa0585170:intron | 30.0% |
| ATTGGTATTCAAAACCATAC+CGG | - | chr4_2:5703347-5703366 | None:intergenic | 30.0% | |
| ATGATACTGAAACAAACACA+CGG | + | chr4_2:5703626-5703645 | Msa0585170:intron | 30.0% | |
| AGAGCATAAAGTGGTTAAAA+AGG | - | chr4_2:5703749-5703768 | None:intergenic | 30.0% | |
| TCCTCAAGAAAGTTGTATTT+AGG | + | chr4_2:5703785-5703804 | Msa0585170:intron | 30.0% | |
| CCTCAAGAAAGTTGTATTTA+GGG | + | chr4_2:5703786-5703805 | Msa0585170:intron | 30.0% | |
| ! | ATTCATAACTTAAGTTGTGG+AGG | - | chr4_2:5703852-5703871 | None:intergenic | 30.0% |
| GAAGATAACTAAGCTCAATT+CGG | - | chr4_2:5703953-5703972 | None:intergenic | 30.0% | |
| GTTATCTTCATAAACGTTGT+AGG | + | chr4_2:5703964-5703983 | Msa0585170:intron | 30.0% | |
| ATGATCAAAATACCACACAT+AGG | + | chr4_2:5704049-5704068 | Msa0585170:intron | 30.0% | |
| TACATATTCTAGACGGAAAA+TGG | - | chr4_2:5704124-5704143 | None:intergenic | 30.0% | |
| AAATCATAACTCAAGCTCTA+GGG | - | chr4_2:5704194-5704213 | None:intergenic | 30.0% | |
| TAAATCATAACTCAAGCTCT+AGG | - | chr4_2:5704195-5704214 | None:intergenic | 30.0% | |
| TAAATTGAAGTGATTACCTC+AGG | + | chr4_2:5704385-5704404 | Msa0585170:intron | 30.0% | |
| ACTTAAACTAGAATGGAGAA+TGG | + | chr4_2:5704538-5704557 | Msa0585170:intron | 30.0% | |
| CTTAAACTAGAATGGAGAAT+GGG | + | chr4_2:5704539-5704558 | Msa0585170:intron | 30.0% | |
| TTAAACTAGAATGGAGAATG+GGG | + | chr4_2:5704540-5704559 | Msa0585170:intron | 30.0% | |
| AATGGGGTATACTATTAGAT+AGG | + | chr4_2:5704556-5704575 | Msa0585170:intron | 30.0% | |
| TAGGATGAAAGATGTAGTAA+TGG | + | chr4_2:5704575-5704594 | Msa0585170:intron | 30.0% | |
| ! | AGATGTTGTTTAATGATGAG+AGG | + | chr4_2:5704677-5704696 | Msa0585170:intron | 30.0% |
| CTGAGATGATAATTGTTGAA+TGG | + | chr4_2:5704726-5704745 | Msa0585170:intron | 30.0% | |
| TGTTAGTAGAGTTAAAGCAT+TGG | + | chr4_2:5704848-5704867 | Msa0585170:intron | 30.0% | |
| ! | GTTAGTAGAGTTAAAGCATT+GGG | + | chr4_2:5704849-5704868 | Msa0585170:intron | 30.0% |
| AAGTTCGCTGATGATAATAA+CGG | + | chr4_2:5704873-5704892 | Msa0585170:intron | 30.0% | |
| AACACACGATTTAGTAAAAG+GGG | + | chr4_2:5704978-5704997 | Msa0585170:intron | 30.0% | |
| GGTATAAGACAATGATGAAA+GGG | + | chr4_2:5704999-5705018 | Msa0585170:intron | 30.0% | |
| GTATAAGACAATGATGAAAG+GGG | + | chr4_2:5705000-5705019 | Msa0585170:intron | 30.0% | |
| GGTATTCCTAAACTCATTAT+TGG | - | chr4_2:5705082-5705101 | None:intergenic | 30.0% | |
| CTTAAGTTCTTTAACTACCT+TGG | - | chr4_2:5705127-5705146 | None:intergenic | 30.0% | |
| ATGTTAGATAGTACCGTATA+AGG | + | chr4_2:5705151-5705170 | Msa0585170:intron | 30.0% | |
| GAAAAATGTAAGGGAAGATA+AGG | + | chr4_2:5705240-5705259 | Msa0585170:intron | 30.0% | |
| AAGAAAGGGTCTATTGAAAA+AGG | + | chr4_2:5705491-5705510 | Msa0585170:CDS | 30.0% | |
| ATATCTCATTGTCTCAATGA+AGG | + | chr4_2:5705768-5705787 | Msa0585170:CDS | 30.0% | |
| GTTGATTGACCATAATTTGA+AGG | + | chr4_2:5705842-5705861 | Msa0585170:CDS | 30.0% | |
| TACCAATGTCCTTCAAATTA+TGG | - | chr4_2:5705854-5705873 | None:intergenic | 30.0% | |
| !! | TCAATTATTGATGGACTCAA+TGG | + | chr4_2:5705992-5706011 | Msa0585170:CDS | 30.0% |
| CCACAAGGAAAATATATGCA+AGG | - | chr4_2:5699467-5699486 | None:intergenic | 35.0% | |
| ! | CCTTGCATATATTTTCCTTG+TGG | + | chr4_2:5698929-5698948 | Msa0585170:intron | 35.0% |
| CAATCTCCTAATTCTAGCAT+AGG | - | chr4_2:5699140-5699159 | None:intergenic | 35.0% | |
| TGGTACAAAATCCAGAGATT+GGG | - | chr4_2:5699253-5699272 | None:intergenic | 35.0% | |
| TTGGTACAAAATCCAGAGAT+TGG | - | chr4_2:5699254-5699273 | None:intergenic | 35.0% | |
| AGATACAACAATGAAGCCTT+TGG | - | chr4_2:5699285-5699304 | None:intergenic | 35.0% | |
| ! | TTCAACATTTTCGTAGCTTC+TGG | + | chr4_2:5699425-5699444 | Msa0585170:intron | 35.0% |
| ! | GCTTGCATATATTTTCCTTG+TGG | - | chr4_2:5699470-5699489 | None:intergenic | 35.0% |
| ! | TTTGACAGATAGGGTTCTAA+AGG | + | chr4_2:5699596-5699615 | Msa0585170:intron | 35.0% |
| !!! | TGAAAGAGCTTTTTCAGCAA+TGG | - | chr4_2:5700012-5700031 | None:intergenic | 35.0% |
| TGCTGAAAAAGCTCTTTCAA+CGG | + | chr4_2:5700013-5700032 | Msa0585170:intron | 35.0% | |
| CACAAAACAAAAGCAACGTT+TGG | + | chr4_2:5700502-5700521 | Msa0585170:intron | 35.0% | |
| GAGAAAAACAAACTTGATGG+AGG | + | chr4_2:5700783-5700802 | Msa0585170:intron | 35.0% | |
| ! | TCTTTCTTTTCATGCAGGAA+TGG | + | chr4_2:5701015-5701034 | Msa0585170:intron | 35.0% |
| ! | CTTTCTTTTCATGCAGGAAT+GGG | + | chr4_2:5701016-5701035 | Msa0585170:intron | 35.0% |
| ! | CTCCTACTTTGTTTGGTAAA+AGG | - | chr4_2:5701054-5701073 | None:intergenic | 35.0% |
| GCTGATTGACCATAATTTGA+AGG | + | chr4_2:5701175-5701194 | Msa0585170:intron | 35.0% | |
| AAACCAAGTTCAACTCGAAA+TGG | + | chr4_2:5701244-5701263 | Msa0585170:CDS | 35.0% | |
| TGCATATAGGAGTGAAGAAA+TGG | + | chr4_2:5701295-5701314 | Msa0585170:CDS | 35.0% | |
| GGTCTGAATTATTACCTTGA+AGG | + | chr4_2:5701408-5701427 | Msa0585170:intron | 35.0% | |
| ATTGAAAGCTACACACCAAT+AGG | - | chr4_2:5701573-5701592 | None:intergenic | 35.0% | |
| ! | GGGTTTTCAATCTTAACTGT+TGG | - | chr4_2:5701770-5701789 | None:intergenic | 35.0% |
| CTAGGTCTCAATTCTTAGTT+TGG | + | chr4_2:5701793-5701812 | Msa0585170:intron | 35.0% | |
| GAGACTAAAAAAGACGGTTA+GGG | - | chr4_2:5702004-5702023 | None:intergenic | 35.0% | |
| AGAGACTAAAAAAGACGGTT+AGG | - | chr4_2:5702005-5702024 | None:intergenic | 35.0% | |
| TTTGATCCTCTTTGAACCAT+TGG | + | chr4_2:5702076-5702095 | Msa0585170:intron | 35.0% | |
| TATTAAGCTCCCAACAAGTT+TGG | + | chr4_2:5702111-5702130 | Msa0585170:intron | 35.0% | |
| ATTAAGCTCCCAACAAGTTT+GGG | + | chr4_2:5702112-5702131 | Msa0585170:intron | 35.0% | |
| CTAAACATTCCCAAACTTGT+TGG | - | chr4_2:5702124-5702143 | None:intergenic | 35.0% | |
| CAACAAGTTTGGGAATGTTT+AGG | + | chr4_2:5702122-5702141 | Msa0585170:intron | 35.0% | |
| AAACTAAATACTACTCCCTC+CGG | - | chr4_2:5702299-5702318 | None:intergenic | 35.0% | |
| AAATAACTCCAAGGTGAACA+AGG | - | chr4_2:5702404-5702423 | None:intergenic | 35.0% | |
| AAACGAGCCAGAAATTCAAA+TGG | - | chr4_2:5702574-5702593 | None:intergenic | 35.0% | |
| TTCAGAAGAATCAAAAGGAG+GGG | - | chr4_2:5702821-5702840 | None:intergenic | 35.0% | |
| CATTCAGAAGAATCAAAAGG+AGG | - | chr4_2:5702823-5702842 | None:intergenic | 35.0% | |
| TCAAAAGGGAAGAATCAGAA+GGG | - | chr4_2:5702921-5702940 | None:intergenic | 35.0% | |
| ATCAAAAGGGAAGAATCAGA+AGG | - | chr4_2:5702922-5702941 | None:intergenic | 35.0% | |
| TTCGTTGATCCTCTTTCTAT+TGG | + | chr4_2:5702950-5702969 | Msa0585170:intron | 35.0% | |
| TTCTATATGATTGCTTCTCC+CGG | + | chr4_2:5702976-5702995 | Msa0585170:intron | 35.0% | |
| ACATTGTTCTTCTGATTGGA+TGG | + | chr4_2:5703021-5703040 | Msa0585170:intron | 35.0% | |
| GATTGGATGGTTTCTTTCTT+TGG | + | chr4_2:5703034-5703053 | Msa0585170:intron | 35.0% | |
| AAGTGAGTTATCAACGTAGT+CGG | - | chr4_2:5703093-5703112 | None:intergenic | 35.0% | |
| !! | ACTACGTTGATAACTCACTT+TGG | + | chr4_2:5703093-5703112 | Msa0585170:intron | 35.0% |
| ! | CTCTTCATTGGTTATGCTAT+CGG | + | chr4_2:5703122-5703141 | Msa0585170:intron | 35.0% |
| !! | GGCTAATGTAGCTTATTTTC+AGG | + | chr4_2:5703143-5703162 | Msa0585170:intron | 35.0% |
| !! | CATGTTGTTGGTAAGGTTTT+TGG | + | chr4_2:5703317-5703336 | Msa0585170:intron | 35.0% |
| ATCATCTACAGAGACACAAT+TGG | - | chr4_2:5703365-5703384 | None:intergenic | 35.0% | |
| ! | TGCAAATCTCCAAGTTTGTT+TGG | + | chr4_2:5703500-5703519 | Msa0585170:intron | 35.0% |
| ATTTCATGGCCAAACAAACT+TGG | - | chr4_2:5703512-5703531 | None:intergenic | 35.0% | |
| CCCTAAATACAACTTTCTTG+AGG | - | chr4_2:5703789-5703808 | None:intergenic | 35.0% | |
| CTTCATAAACGTTGTAGGTA+TGG | + | chr4_2:5703969-5703988 | Msa0585170:intron | 35.0% | |
| ! | TATTTTCTTATGGCTGGTAG+AGG | - | chr4_2:5704091-5704110 | None:intergenic | 35.0% |
| ATATTCTAGACGGAAAATGG+TGG | - | chr4_2:5704121-5704140 | None:intergenic | 35.0% | |
| !! | ACTAATGGATTCCCAACAAT+GGG | - | chr4_2:5704169-5704188 | None:intergenic | 35.0% |
| ! | AATCATAACTCAAGCTCTAG+GGG | - | chr4_2:5704193-5704212 | None:intergenic | 35.0% |
| TTTCAGTACAATCCTCTTAG+TGG | + | chr4_2:5704252-5704271 | Msa0585170:intron | 35.0% | |
| TTAAGCTTCTTACTATCCTG+AGG | - | chr4_2:5704404-5704423 | None:intergenic | 35.0% | |
| ATAAGAATGTCAAGATGGCT+TGG | + | chr4_2:5704455-5704474 | Msa0585170:intron | 35.0% | |
| TGACGAGTAAATGATGAAGT+GGG | + | chr4_2:5704819-5704838 | Msa0585170:intron | 35.0% | |
| GGGTATAAGACAATGATGAA+AGG | + | chr4_2:5704998-5705017 | Msa0585170:intron | 35.0% | |
| CTGAAAGAATAAAAGAGCCA+AGG | + | chr4_2:5705107-5705126 | Msa0585170:intron | 35.0% | |
| TTTAACCTTACTTCTAGCCA+TGG | - | chr4_2:5705421-5705440 | None:intergenic | 35.0% | |
| CTTGTATGATTCTTTCCTTG+CGG | - | chr4_2:5705466-5705485 | None:intergenic | 35.0% | |
| TTTGTGTCAAGAAAGTCTCT+TGG | - | chr4_2:5705677-5705696 | None:intergenic | 35.0% | |
| AAGAGACTTTCTTGACACAA+AGG | + | chr4_2:5705676-5705695 | Msa0585170:CDS | 35.0% | |
| AGAGACTTTCTTGACACAAA+GGG | + | chr4_2:5705677-5705696 | Msa0585170:CDS | 35.0% | |
| GACCATAATTTGAAGGACAT+TGG | + | chr4_2:5705849-5705868 | Msa0585170:CDS | 35.0% | |
| AGCGAAGAAATGGCAATTAT+GGG | + | chr4_2:5705921-5705940 | Msa0585170:CDS | 35.0% | |
| CATGTTGGGATACCTATTAA+TGG | + | chr4_2:5705951-5705970 | Msa0585170:CDS | 35.0% | |
| !! | ATTATTGATGGACTCAATGG+TGG | + | chr4_2:5705995-5706014 | Msa0585170:CDS | 35.0% |
| AGCAGCATCATTGACAATGA+AGG | - | chr4_2:5698727-5698746 | None:intergenic | 40.0% | |
| TCATTGTCAATGATGCTGCT+AGG | + | chr4_2:5698727-5698746 | Msa0585170:CDS | 40.0% | |
| ACAAGCCTCAATACCACATA+GGG | - | chr4_2:5698787-5698806 | None:intergenic | 40.0% | |
| GAAATGCAGAACTCTCGTAA+AGG | - | chr4_2:5698824-5698843 | None:intergenic | 40.0% | |
| AGATACAACACTGAAGCCTT+TGG | + | chr4_2:5699079-5699098 | Msa0585170:intron | 40.0% | |
| TGTAACAATGCCTTGACCAA+AGG | - | chr4_2:5699098-5699117 | None:intergenic | 40.0% | |
| ATCGATCCTAAGTCTAGCAT+AGG | + | chr4_2:5699224-5699243 | Msa0585170:intron | 40.0% | |
| ! | TGGATTTTGTACCAATGCCT+CGG | + | chr4_2:5699259-5699278 | Msa0585170:intron | 40.0% |
| ! | AACATTTTCGTAGCTTCTGG+AGG | + | chr4_2:5699428-5699447 | Msa0585170:intron | 40.0% |
| ATATCCATCTTGTTCCCACA+AGG | + | chr4_2:5699452-5699471 | Msa0585170:intron | 40.0% | |
| ! | TTTTCCTTGTGGGAACAAGA+TGG | - | chr4_2:5699459-5699478 | None:intergenic | 40.0% |
| TGATGATATGTTACACCGAG+CGG | - | chr4_2:5699935-5699954 | None:intergenic | 40.0% | |
| GCAACAAGATCAACAACAAC+TGG | - | chr4_2:5699968-5699987 | None:intergenic | 40.0% | |
| ATAGAGACTGAGTTTGAGAG+AGG | + | chr4_2:5700848-5700867 | Msa0585170:intron | 40.0% | |
| TAGAGACTGAGTTTGAGAGA+GGG | + | chr4_2:5700849-5700868 | Msa0585170:intron | 40.0% | |
| ! | GGCCTTTTACCAAACAAAGT+AGG | + | chr4_2:5701049-5701068 | Msa0585170:intron | 40.0% |
| GAAGGATATTGGTAGACGTT+TGG | + | chr4_2:5701193-5701212 | Msa0585170:intron | 40.0% | |
| CTATATGCAACTAGACTTCG+TGG | - | chr4_2:5701284-5701303 | None:intergenic | 40.0% | |
| CACGAAGTCTAGTTGCATAT+AGG | + | chr4_2:5701282-5701301 | Msa0585170:CDS | 40.0% | |
| TAAGATTGAAAACCCCAGCT+AGG | + | chr4_2:5701775-5701794 | Msa0585170:intron | 40.0% | |
| TAAGAATTGAGACCTAGCTG+GGG | - | chr4_2:5701790-5701809 | None:intergenic | 40.0% | |
| CTAAGAATTGAGACCTAGCT+GGG | - | chr4_2:5701791-5701810 | None:intergenic | 40.0% | |
| ACTAAGAATTGAGACCTAGC+TGG | - | chr4_2:5701792-5701811 | None:intergenic | 40.0% | |
| AGCAAACCAATGGTTCAAAG+AGG | - | chr4_2:5702085-5702104 | None:intergenic | 40.0% | |
| !! | TTGAACCATTGGTTTGCTTC+CGG | + | chr4_2:5702087-5702106 | Msa0585170:intron | 40.0% |
| GTGTTTGTTCTTACTCCTTC+CGG | + | chr4_2:5702146-5702165 | Msa0585170:intron | 40.0% | |
| TTTCTTGTAAATAGGACCGG+AGG | + | chr4_2:5702280-5702299 | Msa0585170:intron | 40.0% | |
| TTCTTGTAAATAGGACCGGA+GGG | + | chr4_2:5702281-5702300 | Msa0585170:intron | 40.0% | |
| ! | GTTCGGTTTTTCATCCATGA+CGG | + | chr4_2:5702334-5702353 | Msa0585170:intron | 40.0% |
| ! | TTTTCATCCATGACGGCTTT+TGG | + | chr4_2:5702341-5702360 | Msa0585170:intron | 40.0% |
| TTTGTCAACCTTGTTCACCT+TGG | + | chr4_2:5702393-5702412 | Msa0585170:intron | 40.0% | |
| !! | TGGGTATCGAAATAACTCCA+AGG | - | chr4_2:5702413-5702432 | None:intergenic | 40.0% |
| TTCTTCACATATGGAGTTGC+TGG | + | chr4_2:5702521-5702540 | Msa0585170:intron | 40.0% | |
| !! | TATCGCCCTATTGATTCATC+AGG | + | chr4_2:5702718-5702737 | Msa0585170:intron | 40.0% |
| ! | TTCTTTCTTTGGCTGGTTGT+TGG | + | chr4_2:5703045-5703064 | Msa0585170:intron | 40.0% |
| ! | CTTTGGTTGATGCTCTTCAT+TGG | + | chr4_2:5703110-5703129 | Msa0585170:intron | 40.0% |
| !!! | TGGTAAGGTTTTTGGAACAC+CGG | + | chr4_2:5703325-5703344 | Msa0585170:intron | 40.0% |
| ! | TATGTTATCTCTGCTCTGGA+CGG | - | chr4_2:5703441-5703460 | None:intergenic | 40.0% |
| CAATCAGTGTACGGATTTCA+TGG | - | chr4_2:5703526-5703545 | None:intergenic | 40.0% | |
| TAGAGAAGGCAATCAGTGTA+CGG | - | chr4_2:5703535-5703554 | None:intergenic | 40.0% | |
| AGCACAACAAAAACGTGGAA+TGG | - | chr4_2:5703683-5703702 | None:intergenic | 40.0% | |
| !! | TTCCACGTTTTTGTTGTGCT+AGG | + | chr4_2:5703683-5703702 | Msa0585170:intron | 40.0% |
| !! | TCCACGTTTTTGTTGTGCTA+GGG | + | chr4_2:5703684-5703703 | Msa0585170:intron | 40.0% |
| ! | TTATGCTCTGAGTCAAGCTT+AGG | + | chr4_2:5703760-5703779 | Msa0585170:intron | 40.0% |
| !! | TAGGGATGTTAGCTTTCCAA+TGG | + | chr4_2:5703804-5703823 | Msa0585170:intron | 40.0% |
| !!! | AAGGTTGGTTTTTCCAAGTC+TGG | - | chr4_2:5703914-5703933 | None:intergenic | 40.0% |
| GATAACTAAGCTCAATTCGG+AGG | - | chr4_2:5703950-5703969 | None:intergenic | 40.0% | |
| TATGGATGTCAGCTTTGCAA+TGG | + | chr4_2:5703987-5704006 | Msa0585170:intron | 40.0% | |
| ! | TGTCAGCTTTGCAATGGATT+TGG | + | chr4_2:5703993-5704012 | Msa0585170:intron | 40.0% |
| !! | GACTAATGGATTCCCAACAA+TGG | - | chr4_2:5704170-5704189 | None:intergenic | 40.0% |
| !! | ATCATAACTCAAGCTCTAGG+GGG | - | chr4_2:5704192-5704211 | None:intergenic | 40.0% |
| TTAACAACACATCATGACGC+AGG | - | chr4_2:5704227-5704246 | None:intergenic | 40.0% | |
| ATGTTGAAGAGTCCACTAAG+AGG | - | chr4_2:5704267-5704286 | None:intergenic | 40.0% | |
| TTCACATAGGCTACTATCGT+CGG | - | chr4_2:5704434-5704453 | None:intergenic | 40.0% | |
| ! | ACCGATGACGTATCTTGTTT+AGG | + | chr4_2:5704795-5704814 | Msa0585170:intron | 40.0% |
| CCCTAAACAAGATACGTCAT+CGG | - | chr4_2:5704799-5704818 | None:intergenic | 40.0% | |
| ! | CCGATGACGTATCTTGTTTA+GGG | + | chr4_2:5704796-5704815 | Msa0585170:intron | 40.0% |
| GTGACGAGTAAATGATGAAG+TGG | + | chr4_2:5704818-5704837 | Msa0585170:intron | 40.0% | |
| GATGAAAGGGGATATGAAGT+AGG | + | chr4_2:5705012-5705031 | Msa0585170:intron | 40.0% | |
| AGATGATTGTACACGATGAG+AGG | + | chr4_2:5705209-5705228 | Msa0585170:intron | 40.0% | |
| !! | TGAATTTTGAGAGCACGGAT+TGG | - | chr4_2:5705614-5705633 | None:intergenic | 40.0% |
| !! | CGTCATGAATTTTGAGAGCA+CGG | - | chr4_2:5705619-5705638 | None:intergenic | 40.0% |
| TGTGCACGACAATATGTCAA+CGG | + | chr4_2:5705797-5705816 | Msa0585170:CDS | 40.0% | |
| GAGCGAAGAAATGGCAATTA+TGG | + | chr4_2:5705920-5705939 | Msa0585170:CDS | 40.0% | |
| GAAATGGCAATTATGGGTCA+TGG | + | chr4_2:5705927-5705946 | Msa0585170:CDS | 40.0% | |
| ATTATGGGTCATGGACATGT+TGG | + | chr4_2:5705936-5705955 | Msa0585170:CDS | 40.0% | |
| TTATGGGTCATGGACATGTT+GGG | + | chr4_2:5705937-5705956 | Msa0585170:CDS | 40.0% | |
| CCAGAATTGATCTCACCAAA+GGG | - | chr4_2:5706044-5706063 | None:intergenic | 40.0% | |
| TCCAGAATTGATCTCACCAA+AGG | - | chr4_2:5706045-5706064 | None:intergenic | 40.0% | |
| GTTGACATTAGCACCCTATG+TGG | + | chr4_2:5698771-5698790 | Msa0585170:CDS | 45.0% | |
| TAGCACCCTATGTGGTATTG+AGG | + | chr4_2:5698779-5698798 | Msa0585170:CDS | 45.0% | |
| CACAAGCCTCAATACCACAT+AGG | - | chr4_2:5698788-5698807 | None:intergenic | 45.0% | |
| AACACTGAAGCCTTTGGTCA+AGG | + | chr4_2:5699085-5699104 | Msa0585170:intron | 45.0% | |
| GGGACACCTATGCTAGAATT+AGG | + | chr4_2:5699131-5699150 | Msa0585170:intron | 45.0% | |
| CTTAATGAGGGTAAGGTCAG+TGG | + | chr4_2:5699683-5699702 | Msa0585170:intron | 45.0% | |
| TCGCGGTAAAAATTTAGCCC+AGG | - | chr4_2:5699731-5699750 | None:intergenic | 45.0% | |
| TGACTTGAATATCTCCCGCT+CGG | + | chr4_2:5699917-5699936 | Msa0585170:intron | 45.0% | |
| GATGATATGTTACACCGAGC+GGG | - | chr4_2:5699934-5699953 | None:intergenic | 45.0% | |
| ACAAACTTGATGGAGGAGAG+TGG | + | chr4_2:5700790-5700809 | Msa0585170:intron | 45.0% | |
| CTGCTATGCTAGTTGAGAGA+TGG | + | chr4_2:5700891-5700910 | Msa0585170:intron | 45.0% | |
| ATGCTAGTTGAGAGATGGAG+TGG | + | chr4_2:5700896-5700915 | Msa0585170:intron | 45.0% | |
| ! | GCGGGACACTAATTTTCTGA+AGG | + | chr4_2:5700942-5700961 | Msa0585170:intron | 45.0% |
| GGCTCTACTCCTACTTTGTT+TGG | - | chr4_2:5701061-5701080 | None:intergenic | 45.0% | |
| AACAAAGTAGGAGTAGAGCC+TGG | + | chr4_2:5701061-5701080 | Msa0585170:intron | 45.0% | |
| ACAAAGTAGGAGTAGAGCCT+GGG | + | chr4_2:5701062-5701081 | Msa0585170:intron | 45.0% | |
| !! | GGTAGACGTTTGGAAGTGTT+TGG | + | chr4_2:5701203-5701222 | Msa0585170:CDS | 45.0% |
| CCAAGTTCAACTCGAAATGG+CGG | + | chr4_2:5701247-5701266 | Msa0585170:CDS | 45.0% | |
| TATGCAACTAGACTTCGTGG+TGG | - | chr4_2:5701281-5701300 | None:intergenic | 45.0% | |
| TTGATGGAATCAATGGTGGC+TGG | + | chr4_2:5701338-5701357 | Msa0585170:CDS | 45.0% | |
| ! | GTGCAAAACACAGTGCCATT+TGG | + | chr4_2:5701365-5701384 | Msa0585170:CDS | 45.0% |
| !! | AAACACAGTGCCATTTGGTG+AGG | + | chr4_2:5701370-5701389 | Msa0585170:CDS | 45.0% |
| CCAGAATTGACCTCACCAAA+TGG | - | chr4_2:5701383-5701402 | None:intergenic | 45.0% | |
| ! | CCATTTGGTGAGGTCAATTC+TGG | + | chr4_2:5701380-5701399 | Msa0585170:intron | 45.0% |
| !! | GTGAGGTCAATTCTGGAGTT+TGG | + | chr4_2:5701387-5701406 | Msa0585170:intron | 45.0% |
| AATAGCCGGAAGCAAACCAA+TGG | - | chr4_2:5702095-5702114 | None:intergenic | 45.0% | |
| CTTGTTGGGAGCTTAATAGC+CGG | - | chr4_2:5702109-5702128 | None:intergenic | 45.0% | |
| CTCTTGTAAATAGGACCGGA+AGG | - | chr4_2:5702164-5702183 | None:intergenic | 45.0% | |
| CCAATATCCAAAAGCCGTCA+TGG | - | chr4_2:5702351-5702370 | None:intergenic | 45.0% | |
| ! | CCATGACGGCTTTTGGATAT+TGG | + | chr4_2:5702348-5702367 | Msa0585170:intron | 45.0% |
| GGAGTTGCTGGCAATGTAAT+TGG | + | chr4_2:5702533-5702552 | Msa0585170:intron | 45.0% | |
| GTTGCTGGCAATGTAATTGG+TGG | + | chr4_2:5702536-5702555 | Msa0585170:intron | 45.0% | |
| ! | CTTCTCCCGGTTCTTTTGTT+CGG | + | chr4_2:5702989-5703008 | Msa0585170:intron | 45.0% |
| ACCAGACCGAACAAAAGAAC+CGG | - | chr4_2:5702998-5703017 | None:intergenic | 45.0% | |
| GGATGGTTTCTTTCTTTGGC+TGG | + | chr4_2:5703038-5703057 | Msa0585170:intron | 45.0% | |
| ! | TTTGGCTGGTTGTTGGTTGA+TGG | + | chr4_2:5703052-5703071 | Msa0585170:intron | 45.0% |
| !!! | AGGTTTTTGGAACACCGGTA+TGG | + | chr4_2:5703330-5703349 | Msa0585170:intron | 45.0% |
| AGGGTATGTTATCTCTGCTC+TGG | - | chr4_2:5703445-5703464 | None:intergenic | 45.0% | |
| AGCAGAGATAACATACCCTC+TGG | + | chr4_2:5703446-5703465 | Msa0585170:intron | 45.0% | |
| AGAGATAACATACCCTCTGG+AGG | + | chr4_2:5703449-5703468 | Msa0585170:intron | 45.0% | |
| GAGATAACATACCCTCTGGA+GGG | + | chr4_2:5703450-5703469 | Msa0585170:intron | 45.0% | |
| ! | AGATAACATACCCTCTGGAG+GGG | + | chr4_2:5703451-5703470 | Msa0585170:intron | 45.0% |
| ! | GTACACTGATTGCCTTCTCT+AGG | + | chr4_2:5703534-5703553 | Msa0585170:intron | 45.0% |
| AAAACGTGGAATGGTGAGCA+TGG | - | chr4_2:5703674-5703693 | None:intergenic | 45.0% | |
| TCCCTAGCACAACAAAAACG+TGG | - | chr4_2:5703688-5703707 | None:intergenic | 45.0% | |
| GCTTGACTCAGAGCATAAAG+TGG | - | chr4_2:5703758-5703777 | None:intergenic | 45.0% | |
| !! | TGTTAGCTTTCCAATGGCTC+TGG | + | chr4_2:5703810-5703829 | Msa0585170:intron | 45.0% |
| ! | CTTAAGTTGTGGAGGTCTGA+TGG | - | chr4_2:5703844-5703863 | None:intergenic | 45.0% |
| ! | GGTTTTTCCAAGTCTGGACA+AGG | - | chr4_2:5703908-5703927 | None:intergenic | 45.0% |
| GGTGAAAATGGTCACAAGGT+TGG | - | chr4_2:5703929-5703948 | None:intergenic | 45.0% | |
| GCTCAATTCGGAGGTGAAAA+TGG | - | chr4_2:5703941-5703960 | None:intergenic | 45.0% | |
| TGACTGTGCTAACCTATGTG+TGG | - | chr4_2:5704064-5704083 | None:intergenic | 45.0% | |
| ! | TGTCAAGATGGCTTGGCATT+AGG | + | chr4_2:5704462-5704481 | Msa0585170:intron | 45.0% |
| GAGCAAATAGTGTGGGTAAG+TGG | + | chr4_2:5704945-5704964 | Msa0585170:intron | 45.0% | |
| CTTACTTCTAGCCATGGTTG+TGG | - | chr4_2:5705415-5705434 | None:intergenic | 45.0% | |
| CACAACCATGGCTAGAAGTA+AGG | + | chr4_2:5705413-5705432 | Msa0585170:intron | 45.0% | |
| TGCGGCATCATTGACAATGA+AGG | - | chr4_2:5705448-5705467 | None:intergenic | 45.0% | |
| TCATTGTCAATGATGCCGCA+AGG | + | chr4_2:5705448-5705467 | Msa0585170:CDS | 45.0% | |
| CTCATAAGGGCCATACACTA+TGG | - | chr4_2:5705556-5705575 | None:intergenic | 45.0% | |
| ! | CTTGACACAAAGGGTTCTGA+AGG | + | chr4_2:5705686-5705705 | Msa0585170:CDS | 45.0% |
| GAAGGACATTGGTAGACGTT+TGG | + | chr4_2:5705860-5705879 | Msa0585170:CDS | 45.0% | |
| AGCATCTAGGAGCGAAGAAA+TGG | + | chr4_2:5705911-5705930 | Msa0585170:CDS | 45.0% | |
| CCCTTTGGTGAGATCAATTC+TGG | + | chr4_2:5706041-5706060 | Msa0585170:CDS | 45.0% | |
| GAGGCTTGTGCCATAGTGTA+CGG | + | chr4_2:5698798-5698817 | Msa0585170:intron | 50.0% | |
| CTCGTAAAGGCCGTACACTA+TGG | - | chr4_2:5698811-5698830 | None:intergenic | 50.0% | |
| GGGACACCTATGCTAGACTT+AGG | - | chr4_2:5699233-5699252 | None:intergenic | 50.0% | |
| AGCATAGGTGTCCCAATCTC+TGG | + | chr4_2:5699239-5699258 | Msa0585170:intron | 50.0% | |
| AACAATGAAGCCTTTGGCCG+AGG | - | chr4_2:5699279-5699298 | None:intergenic | 50.0% | |
| AATGAGGGTAAGGTCAGTGG+CGG | + | chr4_2:5699686-5699705 | Msa0585170:intron | 50.0% | |
| TGGGTAGGGTGAATCAACCA+AGG | - | chr4_2:5700714-5700733 | None:intergenic | 50.0% | |
| TGAACAGAGAAGAGTCAGCG+CGG | + | chr4_2:5700923-5700942 | Msa0585170:intron | 50.0% | |
| !! | CCGCCATTTCGAGTTGAACT+TGG | - | chr4_2:5701250-5701269 | None:intergenic | 50.0% |
| CCAGACCGAACAAAAGAACC+GGG | - | chr4_2:5702997-5703016 | None:intergenic | 50.0% | |
| ! | CTGCTCTGGACGGATGAATT+AGG | - | chr4_2:5703431-5703450 | None:intergenic | 50.0% |
| ATCCATTCTTCCCCTCCAGA+GGG | - | chr4_2:5703464-5703483 | None:intergenic | 50.0% | |
| TATCCATTCTTCCCCTCCAG+AGG | - | chr4_2:5703465-5703484 | None:intergenic | 50.0% | |
| CTTCAGCATTCGCCTAGAGA+AGG | - | chr4_2:5703549-5703568 | None:intergenic | 50.0% | |
| ! | TTTGTTGTGCTAGGGACGCA+CGG | + | chr4_2:5703692-5703711 | Msa0585170:intron | 50.0% |
| AAGTTGTGGAGGTCTGATGG+AGG | - | chr4_2:5703841-5703860 | None:intergenic | 50.0% | |
| CGGAGGTGAAAATGGTCACA+AGG | - | chr4_2:5703933-5703952 | None:intergenic | 50.0% | |
| !! | TCAAGCTCTAGGGGGACTAA+TGG | - | chr4_2:5704184-5704203 | None:intergenic | 50.0% |
| AACACATCATGACGCAGGTG+CGG | - | chr4_2:5704222-5704241 | None:intergenic | 50.0% | |
| ATACTACGGATGACGCTACG+AGG | + | chr4_2:5704494-5704513 | Msa0585170:intron | 50.0% | |
| CATGGTTGTGGTAAGAGCGA+AGG | - | chr4_2:5705403-5705422 | None:intergenic | 50.0% | |
| CTTCGCTCTTACCACAACCA+TGG | + | chr4_2:5705401-5705420 | Msa0585170:intron | 50.0% | |
| ACAGGCTTCAATGCCACAGA+GGG | - | chr4_2:5705532-5705551 | None:intergenic | 50.0% | |
| GAAGCCTGTGCCATAGTGTA+TGG | + | chr4_2:5705543-5705562 | Msa0585170:CDS | 50.0% | |
| TCTCTGGCTGAGGCTCATAA+GGG | - | chr4_2:5705569-5705588 | None:intergenic | 50.0% | |
| ATCTCTGGCTGAGGCTCATA+AGG | - | chr4_2:5705570-5705589 | None:intergenic | 50.0% | |
| ATGAGCCTCAGCCAGAGATT+TGG | + | chr4_2:5705571-5705590 | Msa0585170:CDS | 50.0% | |
| TCTGGTGAAGGCCAAATCTC+TGG | - | chr4_2:5705585-5705604 | None:intergenic | 50.0% | |
| ! | AGAGATTTGGCCTTCACCAG+AGG | + | chr4_2:5705584-5705603 | Msa0585170:CDS | 50.0% |
| ! | GAGATTTGGCCTTCACCAGA+GGG | + | chr4_2:5705585-5705604 | Msa0585170:CDS | 50.0% |
| ! | AGATTTGGCCTTCACCAGAG+GGG | + | chr4_2:5705586-5705605 | Msa0585170:CDS | 50.0% |
| GGACATTGGTAGACGTTTGG+CGG | + | chr4_2:5705863-5705882 | Msa0585170:CDS | 50.0% | |
| !! | TTGATGGACTCAATGGTGGC+TGG | + | chr4_2:5705999-5706018 | Msa0585170:CDS | 50.0% |
| TGTACCAATGCCTCGGCCAA+AGG | + | chr4_2:5699266-5699285 | Msa0585170:intron | 55.0% | |
| ! | CCAGGAATTTTCGCGAGCCT+GGG | + | chr4_2:5699711-5699730 | Msa0585170:intron | 55.0% |
| TCAACGGAAGCTGTCGACAC+CGG | + | chr4_2:5700029-5700048 | Msa0585170:intron | 55.0% | |
| TGATGGAGGAGAGTGGAGAC+TGG | + | chr4_2:5700797-5700816 | Msa0585170:intron | 55.0% | |
| AGACTGGAGAGGAGAGGAGA+AGG | + | chr4_2:5700813-5700832 | Msa0585170:intron | 55.0% | |
| GAGTTTGAGAGAGGGAGAGC+TGG | + | chr4_2:5700857-5700876 | Msa0585170:intron | 55.0% | |
| TTTGAGAGAGGGAGAGCTGG+AGG | + | chr4_2:5700860-5700879 | Msa0585170:intron | 55.0% | |
| GAACAGAGAAGAGTCAGCGC+GGG | + | chr4_2:5700924-5700943 | Msa0585170:intron | 55.0% | |
| !! | GCAGGAATGGGCTGTTGAGT+TGG | + | chr4_2:5701028-5701047 | Msa0585170:intron | 55.0% |
| TCTGCCACAACCTTACCCAG+TGG | - | chr4_2:5701120-5701139 | None:intergenic | 55.0% | |
| ! | CCCGGTTCTTTTGTTCGGTC+TGG | + | chr4_2:5702994-5703013 | Msa0585170:intron | 55.0% |
| ! | TACCCTCTGGAGGGGAAGAA+TGG | + | chr4_2:5703459-5703478 | Msa0585170:intron | 55.0% |
| !! | CACACGGTTGTGCCACTTGT+AGG | + | chr4_2:5703642-5703661 | Msa0585170:intron | 55.0% |
| !! | GGTTGTGCCACTTGTAGGCA+CGG | + | chr4_2:5703647-5703666 | Msa0585170:intron | 55.0% |
| GGAGGTGAAACCAGAGCCAT+TGG | - | chr4_2:5703823-5703842 | None:intergenic | 55.0% | |
| TCGTGCACCTTGTCCAGACT+TGG | + | chr4_2:5703898-5703917 | Msa0585170:intron | 55.0% | |
| GCTGAACTTAGCACCCTCTG+TGG | + | chr4_2:5705516-5705535 | Msa0585170:CDS | 55.0% | |
| CACAGGCTTCAATGCCACAG+AGG | - | chr4_2:5705533-5705552 | None:intergenic | 55.0% | |
| AGGGCCATACACTATGGCAC+AGG | - | chr4_2:5705550-5705569 | None:intergenic | 55.0% | |
| GAAGGCCAAATCTCTGGCTG+AGG | - | chr4_2:5705579-5705598 | None:intergenic | 55.0% | |
| ! | GATTTGGCCTTCACCAGAGG+GGG | + | chr4_2:5705587-5705606 | Msa0585170:CDS | 55.0% |
| TACCACCTCCAGCAGCATCT+AGG | + | chr4_2:5705898-5705917 | Msa0585170:CDS | 55.0% | |
| TCTTCGCTCCTAGATGCTGC+TGG | - | chr4_2:5705909-5705928 | None:intergenic | 55.0% | |
| GTGCAAGAGACAGTGCCCTT+TGG | + | chr4_2:5706026-5706045 | Msa0585170:CDS | 55.0% | |
| GAAGCCTTTGGCCGAGGCAT+TGG | - | chr4_2:5699273-5699292 | None:intergenic | 60.0% | |
| ! | GCCAGGAATTTTCGCGAGCC+TGG | + | chr4_2:5699710-5699729 | Msa0585170:intron | 60.0% |
| CCCAGGCTCGCGAAAATTCC+TGG | - | chr4_2:5699714-5699733 | None:intergenic | 60.0% | |
| GAGGAGAGTGGAGACTGGAG+AGG | + | chr4_2:5700802-5700821 | Msa0585170:intron | 60.0% | |
| GAGTGGAGACTGGAGAGGAG+AGG | + | chr4_2:5700807-5700826 | Msa0585170:intron | 60.0% | |
| GCATGGACCGTGCCTACAAG+TGG | - | chr4_2:5703657-5703676 | None:intergenic | 60.0% | |
| GATTGGACCCCCTCTGGTGA+AGG | - | chr4_2:5705597-5705616 | None:intergenic | 60.0% | |
| GATGCTGCTGGAGGTGGTAG+TGG | - | chr4_2:5705897-5705916 | None:intergenic | 60.0% | |
| CTCCTAGATGCTGCTGGAGG+TGG | - | chr4_2:5705903-5705922 | None:intergenic | 60.0% | |
| TCGCTCCTAGATGCTGCTGG+AGG | - | chr4_2:5705906-5705925 | None:intergenic | 60.0% | |
| ! | GTAAGGTCAGTGGCGGAGCC+AGG | + | chr4_2:5699693-5699712 | Msa0585170:intron | 65.0% |
| GGCACTAGCCCAGCCTAGCT+GGG | + | chr4_2:5701083-5701102 | Msa0585170:intron | 65.0% | |
| GCACTAGCCCAGCCTAGCTG+GGG | + | chr4_2:5701084-5701103 | Msa0585170:intron | 65.0% | |
| CACTAGCCCAGCCTAGCTGG+GGG | + | chr4_2:5701085-5701104 | Msa0585170:intron | 65.0% | |
| ACTAGCCCAGCCTAGCTGGG+GGG | + | chr4_2:5701086-5701105 | Msa0585170:intron | 65.0% | |
| GGCGCCACTGGGTAAGGTTG+TGG | + | chr4_2:5701113-5701132 | Msa0585170:intron | 65.0% | |
| !! | AGCACGGATTGGACCCCCTC+TGG | - | chr4_2:5705603-5705622 | None:intergenic | 65.0% |
| !! | GCTAGGCTGGGCTAGTGCCC+AGG | - | chr4_2:5701082-5701101 | None:intergenic | 70.0% |
| GGGCACTAGCCCAGCCTAGC+TGG | + | chr4_2:5701082-5701101 | Msa0585170:intron | 70.0% | |
| CAGCACCCCCCAGCTAGGCT+GGG | - | chr4_2:5701094-5701113 | None:intergenic | 70.0% | |
| !! | GGTGCTGGCGCCACTGGGTA+AGG | + | chr4_2:5701107-5701126 | Msa0585170:intron | 70.0% |
| CCAGCACCCCCCAGCTAGGC+TGG | - | chr4_2:5701095-5701114 | None:intergenic | 75.0% | |
| ! | CCAGCCTAGCTGGGGGGTGC+TGG | + | chr4_2:5701092-5701111 | Msa0585170:intron | 75.0% |
| !! | TGGGGGGTGCTGGCGCCACT+GGG | + | chr4_2:5701102-5701121 | Msa0585170:intron | 75.0% |
| ! | GGCGCCAGCACCCCCCAGCT+AGG | - | chr4_2:5701099-5701118 | None:intergenic | 80.0% |
| !!! | CTGGGGGGTGCTGGCGCCAC+TGG | + | chr4_2:5701101-5701120 | Msa0585170:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 5698721 | 5706088 | 5698721 | ID=Msa0585170;Name=Msa0585170 |
| chr4_2 | mRNA | 5698721 | 5706088 | 5698721 | ID=Msa0585170-mRNA-1;Parent=Msa0585170;Name=Msa0585170-mRNA-1;_AED=0.14;_eAED=0.22;_QI=0|0|0|0.75|0|0|4|0|315 |
| chr4_2 | exon | 5698721 | 5698812 | 5698721 | ID=Msa0585170-mRNA-1:exon:1412;Parent=Msa0585170-mRNA-1 |
| chr4_2 | exon | 5699397 | 5699403 | 5699397 | ID=Msa0585170-mRNA-1:exon:1413;Parent=Msa0585170-mRNA-1 |
| chr4_2 | exon | 5701197 | 5701391 | 5701197 | ID=Msa0585170-mRNA-1:exon:1414;Parent=Msa0585170-mRNA-1 |
| chr4_2 | exon | 5705435 | 5706088 | 5705435 | ID=Msa0585170-mRNA-1:exon:1415;Parent=Msa0585170-mRNA-1 |
| chr4_2 | CDS | 5698721 | 5698812 | 5698721 | ID=Msa0585170-mRNA-1:cds;Parent=Msa0585170-mRNA-1 |
| chr4_2 | CDS | 5699397 | 5699403 | 5699397 | ID=Msa0585170-mRNA-1:cds;Parent=Msa0585170-mRNA-1 |
| chr4_2 | CDS | 5701197 | 5701391 | 5701197 | ID=Msa0585170-mRNA-1:cds;Parent=Msa0585170-mRNA-1 |
| chr4_2 | CDS | 5705435 | 5706088 | 5705435 | ID=Msa0585170-mRNA-1:cds;Parent=Msa0585170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
