Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586280 | XP_039687244.1 | 86.232 | 138 | 9 | 1 | 166 | 293 | 1 | 138 | 2.14e-76 | 243 |
| Msa0586280 | XP_039687244.1 | 90.164 | 61 | 6 | 0 | 105 | 165 | 42 | 102 | 1.59e-24 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586280 | sp|Q8H1G0|GAT28_ARATH | 66.667 | 102 | 34 | 0 | 191 | 292 | 156 | 257 | 5.25e-41 | 149 |
| Msa0586280 | sp|Q8H1G0|GAT28_ARATH | 52.874 | 87 | 39 | 1 | 77 | 163 | 136 | 220 | 1.86e-17 | 85.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0586280 | TF | C2C2-GATA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586280 | MtrunA17_Chr4g0002231 | 83.824 | 136 | 14 | 1 | 166 | 293 | 1 | 136 | 1.62e-78 | 238 |
| Msa0586280 | MtrunA17_Chr4g0002231 | 89.831 | 59 | 6 | 0 | 107 | 165 | 42 | 100 | 2.25e-27 | 105 |
| Msa0586280 | MtrunA17_Chr3g0132761 | 51.020 | 147 | 56 | 4 | 151 | 292 | 99 | 234 | 4.49e-32 | 122 |
| Msa0586280 | MtrunA17_Chr5g0427661 | 58.095 | 105 | 30 | 4 | 191 | 292 | 144 | 237 | 7.66e-29 | 113 |
| Msa0586280 | MtrunA17_Chr3g0132751 | 51.923 | 104 | 41 | 3 | 191 | 292 | 140 | 236 | 7.25e-26 | 107 |
| Msa0586280 | MtrunA17_Chr4g0049741 | 51.961 | 102 | 42 | 2 | 191 | 292 | 117 | 211 | 5.20e-24 | 101 |
| Msa0586280 | MtrunA17_Chr4g0065421 | 66.250 | 80 | 21 | 1 | 1 | 74 | 1 | 80 | 7.92e-24 | 102 |
| Msa0586280 | MtrunA17_Chr4g0002251 | 87.500 | 32 | 4 | 0 | 257 | 288 | 8 | 39 | 6.53e-15 | 69.3 |
| Msa0586280 | MtrunA17_Chr4g0002261 | 61.538 | 52 | 19 | 1 | 81 | 131 | 15 | 66 | 1.59e-12 | 62.4 |
| Msa0586280 | MtrunA17_Chr3g0102511 | 40.230 | 87 | 44 | 3 | 206 | 292 | 4 | 82 | 2.28e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586280 | AT1G51600.1 | 66.667 | 102 | 34 | 0 | 191 | 292 | 156 | 257 | 5.34e-42 | 149 |
| Msa0586280 | AT1G51600.1 | 52.874 | 87 | 39 | 1 | 77 | 163 | 136 | 220 | 1.89e-18 | 85.5 |
| Msa0586280 | AT1G51600.2 | 66.667 | 102 | 34 | 0 | 191 | 292 | 156 | 257 | 5.34e-42 | 149 |
| Msa0586280 | AT1G51600.2 | 52.874 | 87 | 39 | 1 | 77 | 163 | 136 | 220 | 1.89e-18 | 85.5 |
| Msa0586280 | AT3G21175.1 | 60.784 | 102 | 40 | 0 | 191 | 292 | 152 | 253 | 3.77e-38 | 139 |
| Msa0586280 | AT3G21175.1 | 46.939 | 98 | 49 | 2 | 81 | 178 | 134 | 228 | 1.77e-14 | 73.9 |
| Msa0586280 | AT3G21175.2 | 60.784 | 102 | 40 | 0 | 191 | 292 | 150 | 251 | 4.03e-38 | 139 |
| Msa0586280 | AT3G21175.2 | 46.939 | 98 | 49 | 2 | 81 | 178 | 132 | 226 | 1.87e-14 | 73.6 |
| Msa0586280 | AT4G24470.3 | 56.311 | 103 | 34 | 3 | 193 | 292 | 154 | 248 | 6.54e-29 | 114 |
| Msa0586280 | AT4G24470.1 | 56.311 | 103 | 34 | 3 | 193 | 292 | 154 | 248 | 7.62e-29 | 114 |
| Msa0586280 | AT4G24470.2 | 56.311 | 103 | 34 | 3 | 193 | 292 | 154 | 248 | 7.62e-29 | 114 |
| Msa0586280 | AT3G21175.3 | 51.429 | 70 | 34 | 0 | 81 | 150 | 132 | 201 | 3.90e-15 | 74.3 |
| Msa0586280 | AT3G21175.3 | 59.615 | 52 | 21 | 0 | 191 | 242 | 150 | 201 | 7.56e-13 | 67.8 |
Find 88 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAATGGGGTTTCAGTTT+TGG | 0.248316 | 4_2:+7393800 | None:intergenic |
| TGGACTTCTGTGGGCAAATA+AGG | 0.252080 | 4_2:-7389382 | Msa0586280:intron |
| AATTTGGTTTCTTCCGGTTT+TGG | 0.255949 | 4_2:+7393652 | None:intergenic |
| CAGAGGGTTCTTGGCCCTTC+AGG | 0.272302 | 4_2:+7389414 | None:intergenic |
| CAAGCATTGCAGAGGGTTCT+TGG | 0.288221 | 4_2:+7389405 | None:intergenic |
| GTTGGAGAGTTGGGAGGCTT+TGG | 0.296213 | 4_2:+7393854 | None:intergenic |
| TCTGTGAGAAAGTCTAAATT+TGG | 0.313952 | 4_2:+7393698 | None:intergenic |
| AGAAAGAGGAGTTAGGGTTT+TGG | 0.325456 | 4_2:+7393984 | None:intergenic |
| TTTAGGATGCAAAGAAATAA+AGG | 0.333460 | 4_2:-7389806 | Msa0586280:intron |
| TTTAGGATGCAAAGAAATAA+AGG | 0.333460 | 4_2:-7392246 | Msa0586280:intron |
| GAAATCTAAACCTTTGAAAT+CGG | 0.338857 | 4_2:+7393743 | None:intergenic |
| TGTCAAAATTTGGTTTCTTC+CGG | 0.341377 | 4_2:+7393646 | None:intergenic |
| TCGACATAACAATGAAATAA+TGG | 0.356687 | 4_2:-7393895 | Msa0586280:CDS |
| TTCTCACAGATTAGCTTCAT+TGG | 0.358559 | 4_2:-7393685 | Msa0586280:CDS |
| AAATGTGAAGATGCATAAAC+AGG | 0.367056 | 4_2:+7389020 | None:intergenic |
| CTTGCTCGTCCAGCGAATCT+TGG | 0.372260 | 4_2:-7387865 | Msa0586280:CDS |
| CGGAACAAGTGAAGGTTTGA+TGG | 0.376343 | 4_2:-7389726 | Msa0586280:CDS |
| TCAGGTCCACGCCGCATCAT+TGG | 0.388420 | 4_2:+7389432 | None:intergenic |
| GACCCGTTTGTTGGAGAGTT+GGG | 0.392186 | 4_2:+7393845 | None:intergenic |
| AGTCTAAATTTGGTTGAAGT+AGG | 0.408635 | 4_2:+7393708 | None:intergenic |
| AATTGAAGAAAGAGGAGTTA+GGG | 0.410937 | 4_2:+7393978 | None:intergenic |
| GAATTGAAGAAAGAGGAGTT+AGG | 0.424937 | 4_2:+7393977 | None:intergenic |
| TTGAATTGAATTGAAGAAAG+AGG | 0.429755 | 4_2:+7393970 | None:intergenic |
| TTACACATTATCTTGCTGTT+GGG | 0.431240 | 4_2:+7392128 | None:intergenic |
| CTTACACATTATCTTGCTGT+TGG | 0.457624 | 4_2:+7392127 | None:intergenic |
| CTTACACATTATCTTGCTGT+TGG | 0.460419 | 4_2:+7389687 | None:intergenic |
| ATGAGTGTCTGATGAGAAAT+GGG | 0.462114 | 4_2:+7393787 | None:intergenic |
| AGACTCATCATGGTTGGACT+TGG | 0.463495 | 4_2:+7389769 | None:intergenic |
| TTACACATTATCTTGCTGTT+GGG | 0.464252 | 4_2:+7389688 | None:intergenic |
| TGGACTTGGCAGATGTAAAT+CGG | 0.465549 | 4_2:+7389783 | None:intergenic |
| TGGACTTGGCAGATGTAAAT+CGG | 0.465549 | 4_2:+7392223 | None:intergenic |
| TTTGGATTGAAGTTTGAGTT+CGG | 0.467747 | 4_2:+7393872 | None:intergenic |
| AATGAGTGTCTGATGAGAAA+TGG | 0.473328 | 4_2:+7393786 | None:intergenic |
| TGGACTTGGTAGATGTAAAT+CGG | 0.473810 | 4_2:+7391090 | None:intergenic |
| CCTCCCAACTCTCCAACAAA+CGG | 0.474406 | 4_2:-7393848 | Msa0586280:CDS |
| AAATCTAAACCTTTGAAATC+GGG | 0.482007 | 4_2:+7393744 | None:intergenic |
| AATCTGCTCTTGCATCTCCT+TGG | 0.482475 | 4_2:-7387921 | Msa0586280:CDS |
| AGACTCGTCATGGTTGGACT+TGG | 0.484402 | 4_2:+7392209 | None:intergenic |
| CTCCCAACTCTCCAACAAAC+GGG | 0.484494 | 4_2:-7393847 | Msa0586280:CDS |
| TTTGGTAATGACCCGTTTGT+TGG | 0.490080 | 4_2:+7393836 | None:intergenic |
| AAACTCGTCAAGGTTGGACT+TGG | 0.495334 | 4_2:+7391076 | None:intergenic |
| CAGCCGATGCAGACTCATCA+TGG | 0.498772 | 4_2:+7389759 | None:intergenic |
| TTTAGGATGCAAAGAAGTAA+AGG | 0.501385 | 4_2:-7391113 | Msa0586280:intron |
| TGACCCGTTTGTTGGAGAGT+TGG | 0.506710 | 4_2:+7393844 | None:intergenic |
| CAATGCTTGTGGACTTCTGT+GGG | 0.512002 | 4_2:-7389391 | Msa0586280:CDS |
| GCAATGCTTGTGGACTTCTG+TGG | 0.515681 | 4_2:-7389392 | Msa0586280:CDS |
| ATGATGCGGCGTGGACCTGA+AGG | 0.535411 | 4_2:-7389429 | Msa0586280:CDS |
| TTCGTAGAGAGGTAGCATTA+AGG | 0.536977 | 4_2:-7390986 | Msa0586280:intron |
| TTCGTAGAGAGGTAGCATTA+AGG | 0.536977 | 4_2:-7393605 | Msa0586280:intron |
| AGAACCCTCTGCAATGCTTG+TGG | 0.537519 | 4_2:-7389402 | Msa0586280:CDS |
| ATGAATTGCGGAACAAGTGA+AGG | 0.546961 | 4_2:-7389734 | Msa0586280:CDS |
| CTAGGCAAGCAGATTTCGCT+AGG | 0.547679 | 4_2:+7387946 | None:intergenic |
| GGTCTGATGGCAGTCAATGA+TGG | 0.558320 | 4_2:-7392153 | Msa0586280:CDS |
| AATGAGTTGCGAAACGCGGA+AGG | 0.558566 | 4_2:-7391042 | Msa0586280:CDS |
| CAGCCGATGCAGACTCGTCA+TGG | 0.558934 | 4_2:+7392199 | None:intergenic |
| GGTATTCCACCCGATTTCAA+AGG | 0.560480 | 4_2:-7393753 | Msa0586280:CDS |
| CCGTTTGTTGGAGAGTTGGG+AGG | 0.562066 | 4_2:+7393848 | None:intergenic |
| TCTTCAATTCAATTCAACAA+TGG | 0.563651 | 4_2:-7393964 | Msa0586280:exon |
| TGATGCAAACTCGTCAAGGT+TGG | 0.569658 | 4_2:+7391070 | None:intergenic |
| ACAACGAAGGAGAAGATGAA+TGG | 0.572164 | 4_2:+7389066 | None:intergenic |
| CAGCTGATGCAAACTCGTCA+AGG | 0.572366 | 4_2:+7391066 | None:intergenic |
| GGGACTTTAGAGAAGTTCCA+AGG | 0.576663 | 4_2:+7387904 | None:intergenic |
| AGACACTCATTTCGAACAAG+AGG | 0.579521 | 4_2:-7393774 | Msa0586280:CDS |
| TCTAAACCTTTGAAATCGGG+TGG | 0.581523 | 4_2:+7393747 | None:intergenic |
| CGATGCAGACTCATCATGGT+TGG | 0.584481 | 4_2:+7389763 | None:intergenic |
| CAACCATGACGAGTCTGCAT+CGG | 0.589195 | 4_2:-7392202 | Msa0586280:CDS |
| CGATGCAGACTCGTCATGGT+TGG | 0.592233 | 4_2:+7392203 | None:intergenic |
| CTGAAATGAGTTGCGAAACG+CGG | 0.599299 | 4_2:-7391046 | Msa0586280:CDS |
| GCATCGGCTGAAATGAATTG+TGG | 0.599724 | 4_2:-7392186 | Msa0586280:CDS |
| CAACCATGATGAGTCTGCAT+CGG | 0.601385 | 4_2:-7389762 | Msa0586280:CDS |
| TGATGCGGCGTGGACCTGAA+GGG | 0.602634 | 4_2:-7389428 | Msa0586280:CDS |
| TGGAACAAGTGAAGGTCTGA+TGG | 0.607490 | 4_2:-7392166 | Msa0586280:CDS |
| ATGAATTGTGGAACAAGTGA+AGG | 0.614158 | 4_2:-7392174 | Msa0586280:CDS |
| GATGCAAGAGCAGATTCACT+AGG | 0.615731 | 4_2:+7387928 | None:intergenic |
| TCGGTATAATGTTCGTAGAG+AGG | 0.616329 | 4_2:-7390997 | Msa0586280:CDS |
| GGTTTGATGGCAGACAATGA+TGG | 0.622019 | 4_2:-7389713 | Msa0586280:CDS |
| GAGACAAGAAGAAACAACGA+AGG | 0.625651 | 4_2:+7389053 | None:intergenic |
| AGAAGTGCACGCCAATGATG+CGG | 0.629029 | 4_2:-7389443 | Msa0586280:CDS |
| CAAGAGCGAGGCTAAAACGA+GGG | 0.634100 | 4_2:+7387884 | None:intergenic |
| GCATCGGCTGAAATGAATTG+CGG | 0.643791 | 4_2:-7389746 | Msa0586280:CDS |
| GAAGTCCACAAGCATTGCAG+AGG | 0.650799 | 4_2:+7389397 | None:intergenic |
| TCGCTGGACGAGCAAGAGCG+AGG | 0.656186 | 4_2:+7387872 | None:intergenic |
| TCGGTGTAATGTTCGTAGAG+AGG | 0.656453 | 4_2:-7393616 | Msa0586280:CDS |
| TGCACGCCAATGATGCGGCG+TGG | 0.659677 | 4_2:-7389438 | Msa0586280:CDS |
| AAGTCCACAAGCATTGCAGA+GGG | 0.669436 | 4_2:+7389398 | None:intergenic |
| AATGTGAAGATGCATAAACA+GGG | 0.669888 | 4_2:+7389021 | None:intergenic |
| GCAAGAGCGAGGCTAAAACG+AGG | 0.671797 | 4_2:+7387883 | None:intergenic |
| TGAGTGTCTGATGAGAAATG+GGG | 0.715103 | 4_2:+7393788 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTATTTTTATAATCTATA+TGG | - | chr4_2:7388402-7388421 | Msa0586280:intron | 10.0% |
| !! | AAATTTATCAAAATAACTTA+TGG | + | chr4_2:7388469-7388488 | None:intergenic | 10.0% |
| !!! | TAAAAACTAAAAATGTTTTT+AGG | + | chr4_2:7391507-7391526 | None:intergenic | 10.0% |
| !! | TAAAAAATTGTATAAGAAAA+TGG | - | chr4_2:7391698-7391717 | Msa0586280:intron | 10.0% |
| !! | TTCAGTATAAAATAATATAA+AGG | + | chr4_2:7392290-7392309 | None:intergenic | 10.0% |
| !! | CTATTTATCAAATAATATAA+AGG | + | chr4_2:7392318-7392337 | None:intergenic | 10.0% |
| !! | GTATTAAAAAAAATTCAATT+TGG | + | chr4_2:7393739-7393758 | None:intergenic | 10.0% |
| !! | AAAGCTTATTTATTTGTATA+AGG | - | chr4_2:7388712-7388731 | Msa0586280:intron | 15.0% |
| !!! | ATAATTTTAAATTCGTAACA+AGG | - | chr4_2:7389102-7389121 | Msa0586280:intron | 15.0% |
| !! | TCAAAAATTGTATAAGAAAA+TGG | - | chr4_2:7389255-7389274 | Msa0586280:intron | 15.0% |
| !! | CACATATAATAAAATAACTT+CGG | + | chr4_2:7390663-7390682 | None:intergenic | 15.0% |
| !!! | AAAATTTTGACAAAAAAGTT+CGG | - | chr4_2:7390810-7390829 | Msa0586280:intron | 15.0% |
| !! | GTATTCTAATCTATATATTA+TGG | - | chr4_2:7392204-7392223 | Msa0586280:CDS | 15.0% |
| !!! | CAAATTTTGACAAAAATGTT+CGG | - | chr4_2:7388191-7388210 | Msa0586280:intron | 20.0% |
| !!! | GATAGATATTTGCTTTTAAA+AGG | - | chr4_2:7388803-7388822 | Msa0586280:intron | 20.0% |
| !! | GTATATTTCTTCATAACATA+AGG | + | chr4_2:7388990-7389009 | None:intergenic | 20.0% |
| !! | TAGAAGATTATCATTACATA+TGG | + | chr4_2:7389387-7389406 | None:intergenic | 20.0% |
| !! | GACATAAAACAAAATAATGT+CGG | + | chr4_2:7389530-7389549 | None:intergenic | 20.0% |
| !!! | ATTGGTTTATTTTTGAACAA+GGG | - | chr4_2:7389725-7389744 | Msa0586280:CDS | 20.0% |
| !!! | TATTTTGCGATTATGAAAAA+TGG | + | chr4_2:7389924-7389943 | None:intergenic | 20.0% |
| !!! | GATAGATATTTGCTTTTAAA+AGG | - | chr4_2:7388803-7388822 | Msa0586280:intron | 20.0% |
| !! | CAAAGTTATATCATTCTTTA+TGG | + | chr4_2:7390187-7390206 | None:intergenic | 20.0% |
| !! | ATAACTTTGCAAATTTAAAG+TGG | - | chr4_2:7390198-7390217 | Msa0586280:intron | 20.0% |
| !!! | TAACTTTGCAAATTTAAAGT+GGG | - | chr4_2:7390199-7390218 | Msa0586280:intron | 20.0% |
| !!! | TTAATTTTGAATTCCTAACA+AGG | - | chr4_2:7390260-7390279 | Msa0586280:intron | 20.0% |
| !! | TAAGAAATTGTAAACGAAAA+TGG | - | chr4_2:7390385-7390404 | Msa0586280:intron | 20.0% |
| !!! | TGATAGATATTTGTTTCTTT+TGG | - | chr4_2:7391268-7391287 | Msa0586280:intron | 20.0% |
| !!! | GATAGATATTTGTTTCTTTT+GGG | - | chr4_2:7391269-7391288 | Msa0586280:intron | 20.0% |
| !!! | ATAGATATTTGTTTCTTTTG+GGG | - | chr4_2:7391270-7391289 | Msa0586280:intron | 20.0% |
| !! | ACTATATATTGTTTCAGTTT+CGG | - | chr4_2:7391325-7391344 | Msa0586280:intron | 20.0% |
| !! | CAAAGTTATATCATTCTTTA+TGG | + | chr4_2:7390187-7390206 | None:intergenic | 20.0% |
| !! | CATAAAGAATGATATAACTT+TGG | - | chr4_2:7390185-7390204 | Msa0586280:intron | 20.0% |
| !!! | ATAACTTTGGAAATTTAAAG+TGG | - | chr4_2:7391449-7391468 | Msa0586280:intron | 20.0% |
| !!! | TAACTTTGGAAATTTAAAGT+GGG | - | chr4_2:7391450-7391469 | Msa0586280:intron | 20.0% |
| !! | TTAAATTACTAATAAGGAGA+TGG | - | chr4_2:7391549-7391568 | Msa0586280:intron | 20.0% |
| !! | TAGAAGATTATCATTACATA+TGG | + | chr4_2:7389387-7389406 | None:intergenic | 20.0% |
| !! | CACATAAAACAAAATAATGT+CGG | + | chr4_2:7391970-7391989 | None:intergenic | 20.0% |
| !! | AGCTTGAAAATAATCTTATT+TGG | - | chr4_2:7392237-7392256 | Msa0586280:CDS | 20.0% |
| !!! | TTTTGGAAAAGAATATATCA+AGG | - | chr4_2:7393155-7393174 | Msa0586280:intron | 20.0% |
| !! | ACCAACACAATTATAAATAA+GGG | + | chr4_2:7393416-7393435 | None:intergenic | 20.0% |
| !! | CAAAAATTGTTTCATAATCT+TGG | + | chr4_2:7393475-7393494 | None:intergenic | 20.0% |
| !!! | AATCAGAACATTCTTTTTTT+TGG | + | chr4_2:7393597-7393616 | None:intergenic | 20.0% |
| !! | AAAAAAAGAATGTTCTGATT+AGG | - | chr4_2:7393597-7393616 | Msa0586280:intron | 20.0% |
| !! | ATATTAAAAGAGACATGAAT+TGG | - | chr4_2:7393633-7393652 | Msa0586280:CDS | 20.0% |
| !!! | TATTAAATTTTTTGGGACTA+GGG | + | chr4_2:7393761-7393780 | None:intergenic | 20.0% |
| ! | TTGAATTGAATTGAAGAAAG+AGG | + | chr4_2:7387859-7387878 | None:intergenic | 25.0% |
| ! | TCTTCAATTCAATTCAACAA+TGG | - | chr4_2:7387862-7387881 | Msa0586280:CDS | 25.0% |
| ! | TCGACATAACAATGAAATAA+TGG | - | chr4_2:7387931-7387950 | Msa0586280:CDS | 25.0% |
| !!! | AAATCTAAACCTTTGAAATC+GGG | + | chr4_2:7388085-7388104 | None:intergenic | 25.0% |
| !!! | GAAATCTAAACCTTTGAAAT+CGG | + | chr4_2:7388086-7388105 | None:intergenic | 25.0% |
| !! | CGAACATTTTTGTCAAAATT+TGG | + | chr4_2:7388193-7388212 | None:intergenic | 25.0% |
| ! | TTTAAATCAACATGTTGTAC+TGG | - | chr4_2:7388271-7388290 | Msa0586280:intron | 25.0% |
| ! | TTGTTTGGATAAACAACTTA+TGG | - | chr4_2:7388295-7388314 | Msa0586280:intron | 25.0% |
| !!! | TAAGTTTTGTGATTCTGTTT+GGG | + | chr4_2:7388493-7388512 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTGATTCTGTT+TGG | + | chr4_2:7388494-7388513 | None:intergenic | 25.0% |
| ! | AAGCAAATATCTATCATTGT+AGG | + | chr4_2:7388798-7388817 | None:intergenic | 25.0% |
| !!! | TATATCAGTTAAGCTTTAGA+TGG | + | chr4_2:7388951-7388970 | None:intergenic | 25.0% |
| ! | ACAACTTTGCAAATTTAAAG+TGG | - | chr4_2:7389008-7389027 | Msa0586280:CDS | 25.0% |
| !! | AATTTAAAGTGGAGATTTGA+TGG | - | chr4_2:7389019-7389038 | Msa0586280:CDS | 25.0% |
| ! | ATTGAAGTAAAAATGAAAGC+AGG | - | chr4_2:7389322-7389341 | Msa0586280:intron | 25.0% |
| !! | TATCATTACATATGGTGTTA+GGG | + | chr4_2:7389379-7389398 | None:intergenic | 25.0% |
| ! | TTATCATTACATATGGTGTT+AGG | + | chr4_2:7389380-7389399 | None:intergenic | 25.0% |
| ! | CAAATACAACTAACTTCTTT+AGG | - | chr4_2:7389563-7389582 | Msa0586280:intron | 25.0% |
| !! | TTTAGGATGCAAAGAAATAA+AGG | - | chr4_2:7389580-7389599 | Msa0586280:intron | 25.0% |
| !!! | AAGATAATGTGTAAGTTGAT+TGG | - | chr4_2:7389707-7389726 | Msa0586280:CDS | 25.0% |
| !!! | GATTGGTTTATTTTTGAACA+AGG | - | chr4_2:7389724-7389743 | Msa0586280:CDS | 25.0% |
| !!! | AGATATTTGCTTTTAAAAGG+AGG | - | chr4_2:7388806-7388825 | Msa0586280:intron | 25.0% |
| ! | ATTTCAGTTCATATTAGTCA+AGG | - | chr4_2:7390090-7390109 | Msa0586280:intron | 25.0% |
| ! | TATATCAGTTAAGCATTAGA+TGG | + | chr4_2:7390141-7390160 | None:intergenic | 25.0% |
| ! | ATATCATTCTTTATGGCATA+AGG | + | chr4_2:7390180-7390199 | None:intergenic | 25.0% |
| !! | AACTTTGCAAATTTAAAGTG+GGG | - | chr4_2:7389010-7389029 | Msa0586280:CDS | 25.0% |
| ! | GAGAAGATAAAAAACAAACT+TGG | - | chr4_2:7390319-7390338 | Msa0586280:intron | 25.0% |
| ! | GAGAAGATTATCATTACATA+CGG | + | chr4_2:7390521-7390540 | None:intergenic | 25.0% |
| ! | AAAAATAAGCCAATCCAAAA+GGG | + | chr4_2:7391027-7391046 | None:intergenic | 25.0% |
| ! | AAAAAATAAGCCAATCCAAA+AGG | + | chr4_2:7391028-7391047 | None:intergenic | 25.0% |
| ! | AAACAAATATCTATCATTGC+AGG | + | chr4_2:7391264-7391283 | None:intergenic | 25.0% |
| !!! | TATATAAGCTAAGCTTTAGA+TGG | + | chr4_2:7391392-7391411 | None:intergenic | 25.0% |
| !! | AACTTTGGAAATTTAAAGTG+GGG | - | chr4_2:7391451-7391470 | Msa0586280:intron | 25.0% |
| !! | ATAACATATGTTTGCTACAT+AGG | + | chr4_2:7391579-7391598 | None:intergenic | 25.0% |
| ! | AATTGTATAAGAAAATGGCA+AGG | - | chr4_2:7391703-7391722 | Msa0586280:intron | 25.0% |
| !! | TATCATTACATATGGTGTTA+AGG | + | chr4_2:7389379-7389398 | None:intergenic | 25.0% |
| ! | CAAATACAAGTAACTTCTTT+AGG | - | chr4_2:7392003-7392022 | Msa0586280:intron | 25.0% |
| !! | TTTAGGATGCAAAGAAATAA+AGG | - | chr4_2:7389580-7389599 | Msa0586280:intron | 25.0% |
| !!! | ACTGGTTTATTTTTGAACAA+GGG | - | chr4_2:7392165-7392184 | Msa0586280:CDS | 25.0% |
| ! | ATAAAGGACAATTTCAGTAT+AGG | + | chr4_2:7392274-7392293 | None:intergenic | 25.0% |
| ! | ATTAACCCGTAATAATTGTA+TGG | + | chr4_2:7392532-7392551 | None:intergenic | 25.0% |
| !!! | AAGGTTTTTTTGAAGCAATT+TGG | - | chr4_2:7393126-7393145 | Msa0586280:intron | 25.0% |
| !!! | AGGTTTTTTTGAAGCAATTT+GGG | - | chr4_2:7393127-7393146 | Msa0586280:intron | 25.0% |
| ! | ACTTATGTAAATTACGTGTA+AGG | - | chr4_2:7393377-7393396 | Msa0586280:intron | 25.0% |
| ! | CCAACACAATTATAAATAAG+GGG | + | chr4_2:7393415-7393434 | None:intergenic | 25.0% |
| ! | GACCAACACAATTATAAATA+AGG | + | chr4_2:7393417-7393436 | None:intergenic | 25.0% |
| ! | ACACATAATCTTATAGAAAG+AGG | + | chr4_2:7393519-7393538 | None:intergenic | 25.0% |
| ! | TCACTTACACAATTATAGAT+TGG | + | chr4_2:7393554-7393573 | None:intergenic | 25.0% |
| !! | TTGGATTCTTACTACTATTT+TGG | + | chr4_2:7393720-7393739 | None:intergenic | 25.0% |
| !!! | CTATTAAATTTTTTGGGACT+AGG | + | chr4_2:7393762-7393781 | None:intergenic | 25.0% |
| AATTGAAGAAAGAGGAGTTA+GGG | + | chr4_2:7387851-7387870 | None:intergenic | 30.0% | |
| ! | TTTGGATTGAAGTTTGAGTT+CGG | + | chr4_2:7387957-7387976 | None:intergenic | 30.0% |
| !!! | TTTGGGTTTTTTCTCTGATT+TGG | + | chr4_2:7388011-7388030 | None:intergenic | 30.0% |
| AGTCTAAATTTGGTTGAAGT+AGG | + | chr4_2:7388121-7388140 | None:intergenic | 30.0% | |
| TCTGTGAGAAAGTCTAAATT+TGG | + | chr4_2:7388131-7388150 | None:intergenic | 30.0% | |
| ! | TGTCAAAATTTGGTTTCTTC+CGG | + | chr4_2:7388183-7388202 | None:intergenic | 30.0% |
| TAGCATTAAGGTATGTGTAT+AGG | - | chr4_2:7388233-7388252 | Msa0586280:intron | 30.0% | |
| AGCATTAAGGTATGTGTATA+GGG | - | chr4_2:7388234-7388253 | Msa0586280:intron | 30.0% | |
| GTTAGTTCAAAAGCTCAATT+AGG | - | chr4_2:7388514-7388533 | Msa0586280:intron | 30.0% | |
| AAAAACAAGCCAATCCAAAT+GGG | + | chr4_2:7388561-7388580 | None:intergenic | 30.0% | |
| CAATCCAAATGAATTCATAG+TGG | - | chr4_2:7388761-7388780 | Msa0586280:intron | 30.0% | |
| GTTTCAGTTCATATTAGTCA+AGG | - | chr4_2:7388900-7388919 | Msa0586280:intron | 30.0% | |
| ! | TGGAGATTTGATGGATATAT+TGG | - | chr4_2:7389028-7389047 | Msa0586280:CDS | 30.0% |
| TTAAATTCGTAACAAGGAGA+TGG | - | chr4_2:7389108-7389127 | Msa0586280:intron | 30.0% | |
| AATTGTATAAGAAAATGGCG+AGG | - | chr4_2:7389260-7389279 | Msa0586280:intron | 30.0% | |
| ! | TTGTATTTGTTAGCAAGTGT+TGG | + | chr4_2:7389552-7389571 | None:intergenic | 30.0% |
| !! | TTACACATTATCTTGCTGTT+GGG | + | chr4_2:7389701-7389720 | None:intergenic | 30.0% |
| TATGATTCATAAGCTTGTCA+AGG | - | chr4_2:7389809-7389828 | Msa0586280:intron | 30.0% | |
| AAATATCTATCATTGCAGAC+TGG | + | chr4_2:7389985-7390004 | None:intergenic | 30.0% | |
| !! | TCTTTTGGGAAATAGTATTC+AGG | - | chr4_2:7390033-7390052 | Msa0586280:intron | 30.0% |
| AATTGTAAACGAAAATGGTG+AGG | - | chr4_2:7390390-7390409 | Msa0586280:intron | 30.0% | |
| ATTGTAAACGAAAATGGTGA+GGG | - | chr4_2:7390391-7390410 | Msa0586280:intron | 30.0% | |
| !! | CTATTACACTGCTTTAAGAA+GGG | + | chr4_2:7390550-7390569 | None:intergenic | 30.0% |
| !! | ACTATTACACTGCTTTAAGA+AGG | + | chr4_2:7390551-7390570 | None:intergenic | 30.0% |
| CAAATACAAGCAACTTCTTT+AGG | - | chr4_2:7390696-7390715 | Msa0586280:intron | 30.0% | |
| ! | TTTAGGATGCAAAGAAGTAA+AGG | - | chr4_2:7390713-7390732 | Msa0586280:intron | 30.0% |
| TAGCATTAAGGTATGTTTAG+AGG | - | chr4_2:7390852-7390871 | Msa0586280:intron | 30.0% | |
| AGCATTAAGGTATGTTTAGA+GGG | - | chr4_2:7390853-7390872 | Msa0586280:intron | 30.0% | |
| GTTTCGGTTCATATTAGTTA+AGG | - | chr4_2:7391341-7391360 | Msa0586280:intron | 30.0% | |
| GTTCATATTAGTTAAGGACT+TGG | - | chr4_2:7391347-7391366 | Msa0586280:intron | 30.0% | |
| ATATCATTCTTTATGGCGTA+AGG | + | chr4_2:7391431-7391450 | None:intergenic | 30.0% | |
| GGGGATTTGATGAATATATT+TGG | - | chr4_2:7391470-7391489 | Msa0586280:intron | 30.0% | |
| AGAGAAGATAGAAACAAACT+AGG | - | chr4_2:7391601-7391620 | Msa0586280:intron | 30.0% | |
| GTTGAAGTAAAAATGAAAGC+AGG | - | chr4_2:7391760-7391779 | Msa0586280:intron | 30.0% | |
| !! | TTACACATTATCTTGCTGTT+GGG | + | chr4_2:7389701-7389720 | None:intergenic | 30.0% |
| AAGATAATGTGTAAGTAGAC+TGG | - | chr4_2:7392147-7392166 | Msa0586280:CDS | 30.0% | |
| !!! | GACTGGTTTATTTTTGAACA+AGG | - | chr4_2:7392164-7392183 | Msa0586280:CDS | 30.0% |
| TTTCAACTCATATCAGTTGT+AGG | - | chr4_2:7392344-7392363 | Msa0586280:intron | 30.0% | |
| AGCAACATTGGAAAAACAAA+AGG | + | chr4_2:7392509-7392528 | None:intergenic | 30.0% | |
| ATAATTGTATGGAGCAACAT+TGG | + | chr4_2:7392521-7392540 | None:intergenic | 30.0% | |
| GTTGCTCCATACAATTATTA+CGG | - | chr4_2:7392523-7392542 | Msa0586280:intron | 30.0% | |
| TTGCTCCATACAATTATTAC+GGG | - | chr4_2:7392524-7392543 | Msa0586280:intron | 30.0% | |
| !! | TTACGGGTTAATCATGATTT+TGG | - | chr4_2:7392540-7392559 | Msa0586280:intron | 30.0% |
| TCACAATGACAGATAAATGA+GGG | + | chr4_2:7392642-7392661 | None:intergenic | 30.0% | |
| TTCACAATGACAGATAAATG+AGG | + | chr4_2:7392643-7392662 | None:intergenic | 30.0% | |
| TCATTGTGAATGTGTTAAAG+TGG | - | chr4_2:7392653-7392672 | Msa0586280:intron | 30.0% | |
| !! | ATGTTTTTATTAATGCCACC+TGG | - | chr4_2:7392705-7392724 | Msa0586280:intron | 30.0% |
| AATGTGAAGATGCATAAACA+GGG | + | chr4_2:7392808-7392827 | None:intergenic | 30.0% | |
| AAATGTGAAGATGCATAAAC+AGG | + | chr4_2:7392809-7392828 | None:intergenic | 30.0% | |
| TTTCAGATTTGCAGGAAAAA+TGG | - | chr4_2:7392936-7392955 | Msa0586280:intron | 30.0% | |
| TTCAGATTTGCAGGAAAAAT+GGG | - | chr4_2:7392937-7392956 | Msa0586280:intron | 30.0% | |
| TATATGCAGAAGTTGTTAGT+TGG | - | chr4_2:7392993-7393012 | Msa0586280:intron | 30.0% | |
| ATATGCAGAAGTTGTTAGTT+GGG | - | chr4_2:7392994-7393013 | Msa0586280:intron | 30.0% | |
| GATGAATTTGACGTTGTTAA+TGG | - | chr4_2:7393019-7393038 | Msa0586280:intron | 30.0% | |
| TTGCAACATACATGAAATGA+AGG | - | chr4_2:7393107-7393126 | Msa0586280:intron | 30.0% | |
| ! | AAGCAATTTGGGAATGATTT+TGG | - | chr4_2:7393138-7393157 | Msa0586280:intron | 30.0% |
| ACAAAATGAAGAAGTTAGAG+AGG | - | chr4_2:7393185-7393204 | Msa0586280:intron | 30.0% | |
| CAAAATGAAGAAGTTAGAGA+GGG | - | chr4_2:7393186-7393205 | Msa0586280:intron | 30.0% | |
| AAAGAAGAACTTACTCATGA+TGG | - | chr4_2:7393210-7393229 | Msa0586280:intron | 30.0% | |
| !!! | CGTGTACTCTCAATATTTTT+TGG | - | chr4_2:7393288-7393307 | Msa0586280:intron | 30.0% |
| TTACGTGTAAGGATATGAAT+TGG | - | chr4_2:7393388-7393407 | Msa0586280:intron | 30.0% | |
| ! | CCCCTTATTTATAATTGTGT+TGG | - | chr4_2:7393412-7393431 | Msa0586280:intron | 30.0% |
| ATCTTGGCATAAACTTATGT+TGG | + | chr4_2:7393459-7393478 | None:intergenic | 30.0% | |
| TGTAAGTGAATGTTCTGATT+AGG | - | chr4_2:7393565-7393584 | Msa0586280:intron | 30.0% | |
| GAATAGAAGACATGAATAAG+AGG | - | chr4_2:7393691-7393710 | Msa0586280:CDS | 30.0% | |
| GATAGAATCTCTTTGTGAAA+TGG | - | chr4_2:7393816-7393835 | Msa0586280:CDS | 30.0% | |
| GAATTGAAGAAAGAGGAGTT+AGG | + | chr4_2:7387852-7387871 | None:intergenic | 35.0% | |
| ! | AGAAATGGGGTTTCAGTTTT+GGG | + | chr4_2:7388028-7388047 | None:intergenic | 35.0% |
| ATGAGTGTCTGATGAGAAAT+GGG | + | chr4_2:7388042-7388061 | None:intergenic | 35.0% | |
| AATGAGTGTCTGATGAGAAA+TGG | + | chr4_2:7388043-7388062 | None:intergenic | 35.0% | |
| !!! | TTGAAGTAGGAGTTTTAGGA+TGG | + | chr4_2:7388108-7388127 | None:intergenic | 35.0% |
| ! | TTGGTTGAAGTAGGAGTTTT+AGG | + | chr4_2:7388112-7388131 | None:intergenic | 35.0% |
| !! | TTCTCACAGATTAGCTTCAT+TGG | - | chr4_2:7388141-7388160 | Msa0586280:intron | 35.0% |
| ! | TGGTTACATTTTGCCAAAAC+CGG | - | chr4_2:7388161-7388180 | Msa0586280:intron | 35.0% |
| !! | AATTTGGTTTCTTCCGGTTT+TGG | + | chr4_2:7388177-7388196 | None:intergenic | 35.0% |
| AAATGGGTCAATGTTCTGTT+TGG | + | chr4_2:7388545-7388564 | None:intergenic | 35.0% | |
| AAACAGAACATTGACCCATT+TGG | - | chr4_2:7388544-7388563 | Msa0586280:intron | 35.0% | |
| CAAAAACAAGCCAATCCAAA+TGG | + | chr4_2:7388562-7388581 | None:intergenic | 35.0% | |
| CATGATTCATAAGCTTGTCA+AGG | - | chr4_2:7388624-7388643 | Msa0586280:intron | 35.0% | |
| ACTGCCACTATGAATTCATT+TGG | + | chr4_2:7388768-7388787 | None:intergenic | 35.0% | |
| ! | CTTTTGTGGTAATAGTGTTC+AGG | - | chr4_2:7388843-7388862 | Msa0586280:intron | 35.0% |
| CTATTACACTGCTTTACGAA+AGG | + | chr4_2:7389416-7389435 | None:intergenic | 35.0% | |
| ATGAATTGTGGAACAAGTGA+AGG | - | chr4_2:7389652-7389671 | Msa0586280:intron | 35.0% | |
| ! | CTTACACATTATCTTGCTGT+TGG | + | chr4_2:7389702-7389721 | None:intergenic | 35.0% |
| ACAAGGGAAGAAAAACTGAA+TGG | - | chr4_2:7389741-7389760 | Msa0586280:CDS | 35.0% | |
| CAAGGGAAGAAAAACTGAAT+GGG | - | chr4_2:7389742-7389761 | Msa0586280:CDS | 35.0% | |
| ! | AACTATGGACTTGTTTGGAT+TGG | + | chr4_2:7389949-7389968 | None:intergenic | 35.0% |
| AATCCAAACAAGTCCATAGT+TGG | - | chr4_2:7389948-7389967 | Msa0586280:intron | 35.0% | |
| GTTCATATTAGTCAAGGACT+TGG | - | chr4_2:7390096-7390115 | Msa0586280:intron | 35.0% | |
| TTGAATTCCTAACAAGGAGA+TGG | - | chr4_2:7390266-7390285 | Msa0586280:intron | 35.0% | |
| GAAAATGGTGAGGGAAATAT+TGG | - | chr4_2:7390400-7390419 | Msa0586280:intron | 35.0% | |
| ! | TGGACTTGGTAGATGTAAAT+CGG | + | chr4_2:7390739-7390758 | None:intergenic | 35.0% |
| ! | ATAAGTTTTGCGAGACTCTT+TGG | + | chr4_2:7390960-7390979 | None:intergenic | 35.0% |
| AAAAGGGTCAATGTTCTGTT+TGG | + | chr4_2:7391011-7391030 | None:intergenic | 35.0% | |
| ! | AAACAGAACATTGACCCTTT+TGG | - | chr4_2:7391010-7391029 | Msa0586280:CDS | 35.0% |
| GAAAATGGCAAGGAAAATGT+TGG | - | chr4_2:7391713-7391732 | Msa0586280:intron | 35.0% | |
| ACTCAGCATATAAACTTGAC+AGG | + | chr4_2:7389463-7389482 | None:intergenic | 35.0% | |
| ! | CTTACACATTATCTTGCTGT+TGG | + | chr4_2:7389702-7389721 | None:intergenic | 35.0% |
| TGTGGGCAAATAAGGTAAAT+GGG | - | chr4_2:7392452-7392471 | Msa0586280:intron | 35.0% | |
| ! | CGAATTGGCTCAATATTACA+GGG | + | chr4_2:7392567-7392586 | None:intergenic | 35.0% |
| CCTGTAATATTGAGCCAATT+CGG | - | chr4_2:7392565-7392584 | Msa0586280:intron | 35.0% | |
| ! | ATATTGAGCCAATTCGGTTT+TGG | - | chr4_2:7392571-7392590 | Msa0586280:intron | 35.0% |
| GATAAATGAGGGGAAAAAAG+TGG | + | chr4_2:7392631-7392650 | None:intergenic | 35.0% | |
| CACAATGACAGATAAATGAG+GGG | + | chr4_2:7392641-7392660 | None:intergenic | 35.0% | |
| TCATCTTCTACTGAATCGTA+TGG | - | chr4_2:7392856-7392875 | Msa0586280:intron | 35.0% | |
| TTCCTGCAAATCTGAAAAGA+AGG | + | chr4_2:7392933-7392952 | None:intergenic | 35.0% | |
| CAACTTCTGCATATAACCTT+AGG | + | chr4_2:7392988-7393007 | None:intergenic | 35.0% | |
| ! | ATCTAAAGCTTACACTGACT+TGG | + | chr4_2:7393324-7393343 | None:intergenic | 35.0% |
| TTGGCATAAACTTATGTTGG+CGG | + | chr4_2:7393456-7393475 | None:intergenic | 35.0% | |
| ! | AGAATGTTCTGATTAGGTTG+TGG | - | chr4_2:7393603-7393622 | Msa0586280:intron | 35.0% |
| ! | GAATGTTCTGATTAGGTTGT+GGG | - | chr4_2:7393604-7393623 | Msa0586280:intron | 35.0% |
| ! | AATGTTCTGATTAGGTTGTG+GGG | - | chr4_2:7393605-7393624 | Msa0586280:intron | 35.0% |
| !! | TTTGGTAATGACCCGTTTGT+TGG | + | chr4_2:7387993-7388012 | None:intergenic | 40.0% |
| ! | GAGAAATGGGGTTTCAGTTT+TGG | + | chr4_2:7388029-7388048 | None:intergenic | 40.0% |
| TGAGTGTCTGATGAGAAATG+GGG | + | chr4_2:7388041-7388060 | None:intergenic | 40.0% | |
| AGACACTCATTTCGAACAAG+AGG | - | chr4_2:7388052-7388071 | Msa0586280:intron | 40.0% | |
| !! | TCTAAACCTTTGAAATCGGG+TGG | + | chr4_2:7388082-7388101 | None:intergenic | 40.0% |
| TTCGTAGAGAGGTAGCATTA+AGG | - | chr4_2:7388221-7388240 | Msa0586280:intron | 40.0% | |
| !! | ACATGTTGTACTGGCTTGTT+TGG | - | chr4_2:7388280-7388299 | Msa0586280:intron | 40.0% |
| GAACATTGACCCATTTGGAT+TGG | - | chr4_2:7388549-7388568 | Msa0586280:intron | 40.0% | |
| GTTCATATTAGTCAAGGACC+TGG | - | chr4_2:7388906-7388925 | Msa0586280:intron | 40.0% | |
| CTCATCAGAGAAAAACATCC+AGG | + | chr4_2:7388927-7388946 | None:intergenic | 40.0% | |
| GAAAATGGCGAGGAAAATGT+TGG | - | chr4_2:7389270-7389289 | Msa0586280:intron | 40.0% | |
| AAATAATGTCGGTCAGAACG+TGG | + | chr4_2:7389519-7389538 | None:intergenic | 40.0% | |
| TGGACTTGGCAGATGTAAAT+CGG | + | chr4_2:7389606-7389625 | None:intergenic | 40.0% | |
| AAGTCTTCCATCTCCTTGTT+AGG | + | chr4_2:7389118-7389137 | None:intergenic | 40.0% | |
| ! | AGAACTCCATTGGAGTGTTA+GGG | + | chr4_2:7390489-7390508 | None:intergenic | 40.0% |
| GTGTTAAGACAGAACTCCAT+TGG | + | chr4_2:7390499-7390518 | None:intergenic | 40.0% | |
| ACTCAGCAGATAAACTTGAC+AGG | + | chr4_2:7390597-7390616 | None:intergenic | 40.0% | |
| TCGGTATAATGTTCGTAGAG+AGG | - | chr4_2:7390829-7390848 | Msa0586280:intron | 40.0% | |
| TTCGTAGAGAGGTAGCATTA+AGG | - | chr4_2:7388221-7388240 | Msa0586280:intron | 40.0% | |
| ! | GAACATTGACCCTTTTGGAT+TGG | - | chr4_2:7391015-7391034 | Msa0586280:CDS | 40.0% |
| TAGCTTATGCGAAGCAACTT+AGG | - | chr4_2:7391047-7391066 | Msa0586280:CDS | 40.0% | |
| CAATCCAAACGAGTTCATAG+TGG | - | chr4_2:7391227-7391246 | Msa0586280:intron | 40.0% | |
| !! | CTTTTGGGGAAATAGTGTTC+TGG | - | chr4_2:7391284-7391303 | Msa0586280:intron | 40.0% |
| ! | ATGGTGTTAAGGCAGTGTTA+GGG | + | chr4_2:7391806-7391825 | None:intergenic | 40.0% |
| ! | TATGGTGTTAAGGCAGTGTT+AGG | + | chr4_2:7391807-7391826 | None:intergenic | 40.0% |
| TGGACTTGGCAGATGTAAAT+CGG | + | chr4_2:7389606-7389625 | None:intergenic | 40.0% | |
| ATGAATTGCGGAACAAGTGA+AGG | - | chr4_2:7392092-7392111 | Msa0586280:intron | 40.0% | |
| CTGTGGGCAAATAAGGTAAA+TGG | - | chr4_2:7392451-7392470 | Msa0586280:intron | 40.0% | |
| ! | CCGAATTGGCTCAATATTAC+AGG | + | chr4_2:7392568-7392587 | None:intergenic | 40.0% |
| TATACGGACCAAAACCGAAT+TGG | + | chr4_2:7392582-7392601 | None:intergenic | 40.0% | |
| !! | GTTAAAGTGGCGTACTGATT+TGG | - | chr4_2:7392666-7392685 | Msa0586280:intron | 40.0% |
| CTTCTTCTTCCTCTTGGTTT+AGG | - | chr4_2:7392732-7392751 | Msa0586280:intron | 40.0% | |
| ACAACGAAGGAGAAGATGAA+TGG | + | chr4_2:7392763-7392782 | None:intergenic | 40.0% | |
| GAGACAAGAAGAAACAACGA+AGG | + | chr4_2:7392776-7392795 | None:intergenic | 40.0% | |
| TTATGTTCGTAGCCATTGAC+TGG | - | chr4_2:7392893-7392912 | Msa0586280:intron | 40.0% | |
| ! | TATGTTCGTAGCCATTGACT+GGG | - | chr4_2:7392894-7392913 | Msa0586280:intron | 40.0% |
| TGAAACATAAGCCCAGTCAA+TGG | + | chr4_2:7392908-7392927 | None:intergenic | 40.0% | |
| ! | TGCCTTCTTTTCAGATTTGC+AGG | - | chr4_2:7392928-7392947 | Msa0586280:intron | 40.0% |
| AGATTTGCAGGAAAAATGGG+AGG | - | chr4_2:7392940-7392959 | Msa0586280:intron | 40.0% | |
| ACAATTCCACCCAATGTTGA+CGG | - | chr4_2:7393081-7393100 | Msa0586280:intron | 40.0% | |
| TTGCAATCACCGTCAACATT+GGG | + | chr4_2:7393093-7393112 | None:intergenic | 40.0% | |
| !! | TGATGGCTTTGATGATGTCT+TGG | - | chr4_2:7393227-7393246 | Msa0586280:intron | 40.0% |
| ! | TCAAGTTTTCCAAGATTCGC+TGG | + | chr4_2:7393973-7393992 | None:intergenic | 40.0% |
| GGTATTCCACCCGATTTCAA+AGG | - | chr4_2:7388073-7388092 | Msa0586280:intron | 45.0% | |
| TCGGTGTAATGTTCGTAGAG+AGG | - | chr4_2:7388210-7388229 | Msa0586280:intron | 45.0% | |
| ! | CTCGCTCAGTGTTTCTTTTG+TGG | - | chr4_2:7388829-7388848 | Msa0586280:intron | 45.0% |
| ! | ATGGTGTTAGGGCAGTGTTA+GGG | + | chr4_2:7389368-7389387 | None:intergenic | 45.0% |
| ! | TATGGTGTTAGGGCAGTGTT+AGG | + | chr4_2:7389369-7389388 | None:intergenic | 45.0% |
| !! | GCATCGGCTGAAATGAATTG+TGG | - | chr4_2:7389640-7389659 | Msa0586280:intron | 45.0% |
| TGGAACAAGTGAAGGTCTGA+TGG | - | chr4_2:7389660-7389679 | Msa0586280:intron | 45.0% | |
| ! | CTGCCAACTATGGACTTGTT+TGG | + | chr4_2:7389954-7389973 | None:intergenic | 45.0% |
| GGTCAATGAACTGCCAACTA+TGG | + | chr4_2:7389964-7389983 | None:intergenic | 45.0% | |
| ! | GCTCGCTCAGTGTTTCTTTT+GGG | - | chr4_2:7390019-7390038 | Msa0586280:intron | 45.0% |
| AACTGACCCTAACACTCCAA+TGG | - | chr4_2:7390480-7390499 | Msa0586280:intron | 45.0% | |
| ! | CAGAACTCCATTGGAGTGTT+AGG | + | chr4_2:7390490-7390509 | None:intergenic | 45.0% |
| AAACTCGTCAAGGTTGGACT+TGG | + | chr4_2:7390753-7390772 | None:intergenic | 45.0% | |
| TGATGCAAACTCGTCAAGGT+TGG | + | chr4_2:7390759-7390778 | None:intergenic | 45.0% | |
| CTGAAATGAGTTGCGAAACG+CGG | - | chr4_2:7390780-7390799 | Msa0586280:intron | 45.0% | |
| ACTGCCACTATGAACTCGTT+TGG | + | chr4_2:7391234-7391253 | None:intergenic | 45.0% | |
| AGACTCATCATGGTTGGACT+TGG | + | chr4_2:7392060-7392079 | None:intergenic | 45.0% | |
| CAACCATGATGAGTCTGCAT+CGG | - | chr4_2:7392064-7392083 | Msa0586280:intron | 45.0% | |
| !! | GCATCGGCTGAAATGAATTG+CGG | - | chr4_2:7389640-7389659 | Msa0586280:intron | 45.0% |
| CGGAACAAGTGAAGGTTTGA+TGG | - | chr4_2:7392100-7392119 | Msa0586280:intron | 45.0% | |
| ! | GGTTTGATGGCAGACAATGA+TGG | - | chr4_2:7392113-7392132 | Msa0586280:intron | 45.0% |
| ! | AAGTCCACAAGCATTGCAGA+GGG | + | chr4_2:7392431-7392450 | None:intergenic | 45.0% |
| CAATGCTTGTGGACTTCTGT+GGG | - | chr4_2:7392435-7392454 | Msa0586280:intron | 45.0% | |
| TGGACTTCTGTGGGCAAATA+AGG | - | chr4_2:7392444-7392463 | Msa0586280:intron | 45.0% | |
| AGAGGAAGAAGAAGAATGCC+AGG | + | chr4_2:7392726-7392745 | None:intergenic | 45.0% | |
| GGCATTCTTCTTCTTCCTCT+TGG | - | chr4_2:7392726-7392745 | Msa0586280:intron | 45.0% | |
| ATGGTCGAACCTAAACCAAG+AGG | + | chr4_2:7392744-7392763 | None:intergenic | 45.0% | |
| AATGGGAGGTAGTAGAAGAC+TGG | - | chr4_2:7392954-7392973 | Msa0586280:intron | 45.0% | |
| ATGGGAGGTAGTAGAAGACT+GGG | - | chr4_2:7392955-7392974 | Msa0586280:intron | 45.0% | |
| GTTGCAATCACCGTCAACAT+TGG | + | chr4_2:7393094-7393113 | None:intergenic | 45.0% | |
| GATGCAAGAGCAGATTCACT+AGG | + | chr4_2:7393901-7393920 | None:intergenic | 45.0% | |
| AATCTGCTCTTGCATCTCCT+TGG | - | chr4_2:7393905-7393924 | Msa0586280:CDS | 45.0% | |
| ! | GGGACTTTAGAGAAGTTCCA+AGG | + | chr4_2:7393925-7393944 | None:intergenic | 45.0% |
| !!! | TTAATTTTAAATTACTAATA+AGG | - | chr4_2:7391543-7391562 | Msa0586280:intron | 5.0% |
| !!! | TCTAAATTTTTTATTTTATA+CGG | + | chr4_2:7392598-7392617 | None:intergenic | 5.0% |
| !!! | AATAGTTTTTAAAAAAAAAA+TGG | - | chr4_2:7393051-7393070 | Msa0586280:intron | 5.0% |
| !!! | TAATTTCTATTAAATTTTTT+GGG | + | chr4_2:7393768-7393787 | None:intergenic | 5.0% |
| !!! | ATAATTTCTATTAAATTTTT+TGG | + | chr4_2:7393769-7393788 | None:intergenic | 5.0% |
| CCTCCCAACTCTCCAACAAA+CGG | - | chr4_2:7387978-7387997 | Msa0586280:intron | 50.0% | |
| CTCCCAACTCTCCAACAAAC+GGG | - | chr4_2:7387979-7387998 | Msa0586280:intron | 50.0% | |
| ! | GACCCGTTTGTTGGAGAGTT+GGG | + | chr4_2:7387984-7388003 | None:intergenic | 50.0% |
| ! | TGACCCGTTTGTTGGAGAGT+TGG | + | chr4_2:7387985-7388004 | None:intergenic | 50.0% |
| AGACTCGTCATGGTTGGACT+TGG | + | chr4_2:7389620-7389639 | None:intergenic | 50.0% | |
| CAACCATGACGAGTCTGCAT+CGG | - | chr4_2:7389624-7389643 | Msa0586280:intron | 50.0% | |
| GGTCTGATGGCAGTCAATGA+TGG | - | chr4_2:7389673-7389692 | Msa0586280:intron | 50.0% | |
| ! | GGCTCGCTCAGTGTTTCTTT+TGG | - | chr4_2:7390018-7390037 | Msa0586280:intron | 50.0% |
| CAGCTGATGCAAACTCGTCA+AGG | + | chr4_2:7390763-7390782 | None:intergenic | 50.0% | |
| AATGAGTTGCGAAACGCGGA+AGG | - | chr4_2:7390784-7390803 | Msa0586280:intron | 50.0% | |
| CGATGCAGACTCATCATGGT+TGG | + | chr4_2:7392066-7392085 | None:intergenic | 50.0% | |
| ! | AGAAGTGCACGCCAATGATG+CGG | - | chr4_2:7392383-7392402 | Msa0586280:intron | 50.0% |
| ! | CAAGCATTGCAGAGGGTTCT+TGG | + | chr4_2:7392424-7392443 | None:intergenic | 50.0% |
| AGAACCCTCTGCAATGCTTG+TGG | - | chr4_2:7392424-7392443 | Msa0586280:intron | 50.0% | |
| ! | GAAGTCCACAAGCATTGCAG+AGG | + | chr4_2:7392432-7392451 | None:intergenic | 50.0% |
| GCAATGCTTGTGGACTTCTG+TGG | - | chr4_2:7392434-7392453 | Msa0586280:intron | 50.0% | |
| GGAAGAAGAAGAATGCCAGG+TGG | + | chr4_2:7392723-7392742 | None:intergenic | 50.0% | |
| AAGACTGGGCGTACAACCTA+AGG | - | chr4_2:7392969-7392988 | Msa0586280:intron | 50.0% | |
| CAATCACCGTCAACATTGGG+TGG | + | chr4_2:7393090-7393109 | None:intergenic | 50.0% | |
| CTAGGCAAGCAGATTTCGCT+AGG | + | chr4_2:7393883-7393902 | None:intergenic | 50.0% | |
| CAAGAGCGAGGCTAAAACGA+GGG | + | chr4_2:7393945-7393964 | None:intergenic | 50.0% | |
| GTTGGAGAGTTGGGAGGCTT+TGG | + | chr4_2:7387975-7387994 | None:intergenic | 55.0% | |
| ! | CCGTTTGTTGGAGAGTTGGG+AGG | + | chr4_2:7387981-7388000 | None:intergenic | 55.0% |
| CGATGCAGACTCGTCATGGT+TGG | + | chr4_2:7389626-7389645 | None:intergenic | 55.0% | |
| CAGCCGATGCAGACTCATCA+TGG | + | chr4_2:7392070-7392089 | None:intergenic | 55.0% | |
| GCAAGAGCGAGGCTAAAACG+AGG | + | chr4_2:7393946-7393965 | None:intergenic | 55.0% | |
| CTTGCTCGTCCAGCGAATCT+TGG | - | chr4_2:7393961-7393980 | Msa0586280:exon | 55.0% | |
| CAGCCGATGCAGACTCGTCA+TGG | + | chr4_2:7389630-7389649 | None:intergenic | 60.0% | |
| TCAGGTCCACGCCGCATCAT+TGG | + | chr4_2:7392397-7392416 | None:intergenic | 60.0% | |
| ATGATGCGGCGTGGACCTGA+AGG | - | chr4_2:7392397-7392416 | Msa0586280:intron | 60.0% | |
| TGATGCGGCGTGGACCTGAA+GGG | - | chr4_2:7392398-7392417 | Msa0586280:intron | 60.0% | |
| CAGAGGGTTCTTGGCCCTTC+AGG | + | chr4_2:7392415-7392434 | None:intergenic | 60.0% | |
| TGCACGCCAATGATGCGGCG+TGG | - | chr4_2:7392388-7392407 | Msa0586280:intron | 65.0% | |
| TCGCTGGACGAGCAAGAGCG+AGG | + | chr4_2:7393957-7393976 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 7387843 | 7394005 | 7387843 | ID=Msa0586280;Name=Msa0586280 |
| chr4_2 | mRNA | 7387843 | 7394005 | 7387843 | ID=Msa0586280-mRNA-1;Parent=Msa0586280;Name=Msa0586280-mRNA-1;_AED=0.35;_eAED=0.35;_QI=38|0.66|0.71|0.71|1|1|7|0|379 |
| chr4_2 | exon | 7387843 | 7387987 | 7387843 | ID=Msa0586280-mRNA-1:exon:1929;Parent=Msa0586280-mRNA-1 |
| chr4_2 | exon | 7388976 | 7389094 | 7388976 | ID=Msa0586280-mRNA-1:exon:1928;Parent=Msa0586280-mRNA-1 |
| chr4_2 | exon | 7389383 | 7389488 | 7389383 | ID=Msa0586280-mRNA-1:exon:1927;Parent=Msa0586280-mRNA-1 |
| chr4_2 | exon | 7389692 | 7389823 | 7389692 | ID=Msa0586280-mRNA-1:exon:1926;Parent=Msa0586280-mRNA-1 |
| chr4_2 | exon | 7390987 | 7391130 | 7390987 | ID=Msa0586280-mRNA-1:exon:1925;Parent=Msa0586280-mRNA-1 |
| chr4_2 | exon | 7392132 | 7392263 | 7392132 | ID=Msa0586280-mRNA-1:exon:1924;Parent=Msa0586280-mRNA-1 |
| chr4_2 | exon | 7393606 | 7394005 | 7393606 | ID=Msa0586280-mRNA-1:exon:1923;Parent=Msa0586280-mRNA-1 |
| chr4_2 | five_prime_UTR | 7393968 | 7394005 | 7393968 | ID=Msa0586280-mRNA-1:five_prime_utr;Parent=Msa0586280-mRNA-1 |
| chr4_2 | CDS | 7393606 | 7393967 | 7393606 | ID=Msa0586280-mRNA-1:cds;Parent=Msa0586280-mRNA-1 |
| chr4_2 | CDS | 7392132 | 7392263 | 7392132 | ID=Msa0586280-mRNA-1:cds;Parent=Msa0586280-mRNA-1 |
| chr4_2 | CDS | 7390987 | 7391130 | 7390987 | ID=Msa0586280-mRNA-1:cds;Parent=Msa0586280-mRNA-1 |
| chr4_2 | CDS | 7389692 | 7389823 | 7389692 | ID=Msa0586280-mRNA-1:cds;Parent=Msa0586280-mRNA-1 |
| chr4_2 | CDS | 7389383 | 7389488 | 7389383 | ID=Msa0586280-mRNA-1:cds;Parent=Msa0586280-mRNA-1 |
| chr4_2 | CDS | 7388976 | 7389094 | 7388976 | ID=Msa0586280-mRNA-1:cds;Parent=Msa0586280-mRNA-1 |
| chr4_2 | CDS | 7387843 | 7387987 | 7387843 | ID=Msa0586280-mRNA-1:cds;Parent=Msa0586280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
