Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0591860 | KEH29059.1 | 86.131 | 274 | 38 | 0 | 1 | 274 | 1 | 274 | 2.37e-173 | 489 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0591860 | sp|Q8L9Y3|ARR14_ARATH | 38.849 | 278 | 129 | 6 | 7 | 245 | 4 | 279 | 5.03e-54 | 182 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0591860 | TF | GARP-ARR-B |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0591860 | MtrunA17_Chr4g0009901 | 86.131 | 274 | 38 | 0 | 1 | 274 | 1 | 274 | 2.18e-177 | 489 |
Msa0591860 | MtrunA17_Chr4g0009851 | 73.859 | 241 | 62 | 1 | 1 | 240 | 1 | 241 | 1.09e-127 | 365 |
Msa0591860 | MtrunA17_Chr4g0009981 | 77.660 | 188 | 42 | 0 | 53 | 240 | 1 | 188 | 1.36e-101 | 297 |
Msa0591860 | MtrunA17_Chr4g0011071 | 74.453 | 137 | 35 | 0 | 55 | 191 | 35 | 171 | 2.91e-72 | 219 |
Msa0591860 | MtrunA17_Chr1g0161431 | 46.000 | 250 | 98 | 4 | 10 | 225 | 11 | 257 | 7.64e-66 | 216 |
Msa0591860 | MtrunA17_Chr4g0009991 | 82.051 | 117 | 20 | 1 | 101 | 217 | 1 | 116 | 7.06e-62 | 191 |
Msa0591860 | MtrunA17_Chr6g0471041 | 45.852 | 229 | 120 | 3 | 10 | 236 | 14 | 240 | 9.95e-56 | 184 |
Msa0591860 | MtrunA17_Chr4g0010001 | 89.888 | 89 | 9 | 0 | 1 | 89 | 1 | 89 | 1.06e-55 | 174 |
Msa0591860 | MtrunA17_Chr4g0067981 | 40.562 | 249 | 122 | 2 | 10 | 232 | 31 | 279 | 2.99e-54 | 186 |
Msa0591860 | MtrunA17_Chr2g0294911 | 41.975 | 243 | 111 | 4 | 10 | 225 | 29 | 268 | 3.49e-52 | 179 |
Msa0591860 | MtrunA17_Chr3g0123131 | 41.393 | 244 | 115 | 5 | 10 | 225 | 13 | 256 | 1.07e-51 | 177 |
Msa0591860 | MtrunA17_Chr8g0376881 | 41.152 | 243 | 117 | 5 | 9 | 225 | 24 | 266 | 7.32e-51 | 174 |
Msa0591860 | MtrunA17_Chr5g0423031 | 84.270 | 89 | 14 | 0 | 1 | 89 | 1 | 89 | 1.15e-47 | 157 |
Msa0591860 | MtrunA17_Chr5g0423031 | 59.259 | 81 | 31 | 1 | 184 | 262 | 80 | 160 | 2.53e-17 | 77.8 |
Msa0591860 | MtrunA17_Chr8g0391911 | 38.462 | 247 | 126 | 3 | 10 | 230 | 9 | 255 | 2.79e-47 | 158 |
Msa0591860 | MtrunA17_Chr1g0149841 | 38.521 | 257 | 127 | 4 | 7 | 232 | 2 | 258 | 1.95e-46 | 162 |
Msa0591860 | MtrunA17_Chr3g0137101 | 39.442 | 251 | 114 | 6 | 10 | 225 | 8 | 255 | 5.76e-45 | 160 |
Msa0591860 | MtrunA17_Chr7g0275401 | 35.178 | 253 | 129 | 4 | 7 | 227 | 2 | 251 | 2.79e-43 | 149 |
Msa0591860 | MtrunA17_Chr7g0275891 | 34.363 | 259 | 129 | 4 | 7 | 224 | 2 | 260 | 1.53e-41 | 145 |
Msa0591860 | MtrunA17_Chr4g0074401 | 34.800 | 250 | 135 | 4 | 10 | 231 | 17 | 266 | 7.30e-41 | 148 |
Msa0591860 | MtrunA17_Chr4g0074411 | 35.223 | 247 | 135 | 4 | 10 | 231 | 18 | 264 | 2.12e-40 | 147 |
Msa0591860 | MtrunA17_Chr2g0304841 | 34.510 | 255 | 128 | 5 | 10 | 226 | 18 | 271 | 7.89e-40 | 146 |
Msa0591860 | MtrunA17_Chr1g0149851 | 33.962 | 265 | 132 | 4 | 7 | 228 | 2 | 266 | 1.32e-39 | 144 |
Msa0591860 | MtrunA17_Chr8g0383961 | 38.462 | 234 | 113 | 6 | 1 | 229 | 1 | 208 | 4.44e-39 | 137 |
Msa0591860 | MtrunA17_Chr6g0456631 | 41.104 | 163 | 93 | 2 | 10 | 169 | 9 | 171 | 1.57e-38 | 133 |
Msa0591860 | MtrunA17_Chr3g0134481 | 33.649 | 211 | 104 | 2 | 10 | 219 | 8 | 183 | 2.25e-32 | 117 |
Msa0591860 | MtrunA17_Chr4g0074421 | 37.017 | 181 | 92 | 3 | 59 | 217 | 2 | 182 | 2.58e-32 | 117 |
Msa0591860 | MtrunA17_Chr3g0134461 | 35.238 | 210 | 109 | 4 | 10 | 217 | 8 | 192 | 5.50e-32 | 117 |
Msa0591860 | MtrunA17_Chr1g0149831 | 35.897 | 195 | 92 | 4 | 68 | 232 | 1 | 192 | 3.50e-28 | 107 |
Msa0591860 | MtrunA17_Chr6g0473731 | 35.256 | 156 | 85 | 2 | 89 | 233 | 10 | 160 | 7.31e-20 | 88.6 |
Msa0591860 | MtrunA17_Chr5g0417521 | 51.429 | 70 | 33 | 1 | 168 | 236 | 15 | 84 | 2.93e-17 | 80.5 |
Msa0591860 | MtrunA17_Chr6g0461641 | 63.636 | 55 | 19 | 1 | 168 | 221 | 42 | 96 | 8.22e-17 | 79.7 |
Msa0591860 | MtrunA17_Chr2g0321461 | 60.000 | 55 | 21 | 1 | 168 | 221 | 45 | 99 | 1.18e-15 | 76.3 |
Msa0591860 | MtrunA17_Chr7g0261911 | 48.052 | 77 | 39 | 1 | 161 | 236 | 255 | 331 | 8.80e-15 | 73.9 |
Msa0591860 | MtrunA17_Chr7g0255711 | 55.932 | 59 | 26 | 0 | 167 | 225 | 90 | 148 | 2.18e-14 | 71.6 |
Msa0591860 | MtrunA17_Chr2g0324891 | 45.055 | 91 | 48 | 2 | 136 | 224 | 127 | 217 | 2.37e-14 | 72.4 |
Msa0591860 | MtrunA17_Chr4g0031961 | 54.237 | 59 | 27 | 0 | 167 | 225 | 130 | 188 | 2.56e-14 | 71.6 |
Msa0591860 | MtrunA17_Chr4g0042451 | 56.364 | 55 | 23 | 1 | 168 | 221 | 17 | 71 | 4.57e-14 | 71.2 |
Msa0591860 | MtrunA17_Chr7g0274471 | 50.000 | 70 | 34 | 1 | 168 | 236 | 218 | 287 | 7.28e-14 | 71.2 |
Msa0591860 | MtrunA17_Chr1g0190301 | 56.897 | 58 | 24 | 1 | 164 | 220 | 171 | 228 | 1.22e-13 | 70.1 |
Msa0591860 | MtrunA17_Chr1g0198601 | 47.500 | 80 | 34 | 2 | 149 | 227 | 199 | 271 | 2.30e-13 | 69.3 |
Msa0591860 | MtrunA17_Chr4g0040481 | 55.172 | 58 | 26 | 0 | 167 | 224 | 157 | 214 | 2.41e-13 | 69.3 |
Msa0591860 | MtrunA17_Chr7g0254981 | 46.835 | 79 | 39 | 2 | 168 | 243 | 50 | 128 | 2.68e-13 | 68.6 |
Msa0591860 | MtrunA17_Chr2g0283951 | 36.667 | 120 | 66 | 4 | 153 | 266 | 69 | 184 | 3.13e-13 | 68.9 |
Msa0591860 | MtrunA17_Chr4g0054981 | 55.357 | 56 | 25 | 0 | 167 | 222 | 309 | 364 | 7.08e-13 | 68.2 |
Msa0591860 | MtrunA17_Chr7g0243081 | 51.786 | 56 | 26 | 1 | 166 | 220 | 69 | 124 | 1.29e-12 | 67.0 |
Msa0591860 | MtrunA17_Chr1g0175091 | 52.632 | 57 | 26 | 1 | 166 | 221 | 256 | 312 | 1.45e-12 | 67.0 |
Msa0591860 | MtrunA17_Chr4g0062921 | 46.753 | 77 | 39 | 2 | 158 | 233 | 226 | 301 | 1.64e-12 | 67.0 |
Msa0591860 | MtrunA17_Chr1g0162931 | 53.571 | 56 | 25 | 1 | 166 | 220 | 16 | 71 | 1.66e-12 | 66.2 |
Msa0591860 | MtrunA17_Chr7g0258551 | 53.571 | 56 | 25 | 1 | 166 | 220 | 210 | 265 | 1.69e-12 | 67.0 |
Msa0591860 | MtrunA17_Chr5g0400241 | 52.542 | 59 | 28 | 0 | 167 | 225 | 310 | 368 | 1.82e-12 | 67.0 |
Msa0591860 | MtrunA17_Chr3g0095611 | 53.571 | 56 | 25 | 1 | 166 | 220 | 17 | 72 | 3.18e-12 | 64.3 |
Msa0591860 | MtrunA17_Chr2g0291021 | 58.182 | 55 | 22 | 1 | 168 | 221 | 49 | 103 | 4.10e-12 | 65.5 |
Msa0591860 | MtrunA17_Chr8g0356501 | 54.237 | 59 | 26 | 1 | 164 | 221 | 33 | 91 | 7.16e-12 | 64.7 |
Msa0591860 | MtrunA17_Chr2g0310011 | 56.364 | 55 | 23 | 1 | 168 | 221 | 35 | 89 | 8.83e-12 | 64.7 |
Msa0591860 | MtrunA17_Chr1g0175071 | 53.968 | 63 | 28 | 1 | 162 | 223 | 171 | 233 | 1.12e-11 | 63.9 |
Msa0591860 | MtrunA17_Chr8g0379121 | 50.000 | 56 | 27 | 1 | 166 | 220 | 109 | 164 | 1.16e-11 | 64.3 |
Msa0591860 | MtrunA17_Chr1g0197171 | 54.237 | 59 | 26 | 1 | 164 | 221 | 40 | 98 | 1.44e-11 | 63.5 |
Msa0591860 | MtrunA17_Chr1g0175081 | 45.614 | 57 | 30 | 1 | 166 | 221 | 20 | 76 | 1.85e-11 | 59.7 |
Msa0591860 | MtrunA17_Chr5g0422621 | 50.769 | 65 | 31 | 1 | 163 | 226 | 193 | 257 | 1.90e-11 | 63.5 |
Msa0591860 | MtrunA17_Chr1g0210911 | 51.786 | 56 | 26 | 1 | 166 | 220 | 20 | 75 | 2.47e-11 | 63.2 |
Msa0591860 | MtrunA17_Chr4g0045361 | 50.820 | 61 | 29 | 1 | 166 | 225 | 272 | 332 | 3.65e-11 | 62.8 |
Msa0591860 | MtrunA17_Chr2g0290991 | 50.000 | 62 | 30 | 1 | 168 | 228 | 39 | 100 | 3.99e-11 | 62.4 |
Msa0591860 | MtrunA17_Chr2g0320231 | 50.000 | 56 | 27 | 1 | 166 | 220 | 95 | 150 | 6.44e-11 | 62.0 |
Msa0591860 | MtrunA17_Chr5g0409731 | 50.847 | 59 | 28 | 1 | 164 | 221 | 21 | 79 | 7.55e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0591860 | AT2G01760.1 | 38.849 | 278 | 129 | 6 | 7 | 245 | 4 | 279 | 5.11e-55 | 182 |
Msa0591860 | AT3G16857.1 | 39.405 | 269 | 117 | 5 | 10 | 232 | 33 | 301 | 7.32e-50 | 174 |
Msa0591860 | AT3G16857.2 | 39.405 | 269 | 117 | 5 | 10 | 232 | 33 | 301 | 1.07e-49 | 174 |
Msa0591860 | AT2G01760.2 | 35.294 | 306 | 129 | 7 | 7 | 245 | 4 | 307 | 3.44e-49 | 167 |
Msa0591860 | AT1G67710.1 | 40.164 | 244 | 117 | 4 | 11 | 225 | 8 | 251 | 6.13e-48 | 167 |
Msa0591860 | AT4G31920.1 | 38.889 | 234 | 125 | 4 | 10 | 228 | 13 | 243 | 8.91e-45 | 159 |
Msa0591860 | AT2G25180.1 | 34.982 | 283 | 156 | 4 | 10 | 268 | 13 | 291 | 1.97e-44 | 159 |
Msa0591860 | AT5G58080.1 | 38.272 | 243 | 118 | 6 | 10 | 225 | 14 | 251 | 4.87e-37 | 139 |
Msa0591860 | AT3G16857.3 | 37.826 | 230 | 97 | 5 | 49 | 232 | 2 | 231 | 7.89e-37 | 138 |
Msa0591860 | AT2G01760.3 | 38.660 | 194 | 81 | 4 | 68 | 225 | 1 | 192 | 8.43e-35 | 127 |
Msa0591860 | AT3G62670.1 | 33.191 | 235 | 132 | 7 | 15 | 226 | 42 | 274 | 1.05e-33 | 127 |
Msa0591860 | AT5G49240.1 | 32.520 | 246 | 137 | 6 | 1 | 217 | 27 | 272 | 7.45e-33 | 122 |
Msa0591860 | AT1G67710.2 | 39.247 | 186 | 85 | 3 | 68 | 225 | 1 | 186 | 4.58e-31 | 120 |
Msa0591860 | AT1G49190.1 | 30.800 | 250 | 138 | 6 | 10 | 226 | 30 | 277 | 5.70e-31 | 119 |
Msa0591860 | AT5G07210.2 | 28.889 | 270 | 136 | 8 | 14 | 229 | 16 | 283 | 2.08e-24 | 102 |
Msa0591860 | AT1G67710.3 | 37.952 | 166 | 75 | 3 | 88 | 225 | 12 | 177 | 3.93e-23 | 98.2 |
Msa0591860 | AT5G07210.1 | 28.058 | 278 | 136 | 9 | 14 | 229 | 16 | 291 | 7.53e-22 | 95.5 |
Msa0591860 | AT2G27070.1 | 26.766 | 269 | 138 | 9 | 14 | 225 | 16 | 282 | 3.32e-17 | 81.6 |
Msa0591860 | AT1G49190.2 | 33.607 | 122 | 80 | 1 | 10 | 130 | 30 | 151 | 6.53e-17 | 80.9 |
Msa0591860 | AT3G04030.1 | 61.818 | 55 | 20 | 1 | 168 | 221 | 45 | 99 | 2.70e-16 | 78.6 |
Msa0591860 | AT3G04030.3 | 61.818 | 55 | 20 | 1 | 168 | 221 | 45 | 99 | 2.85e-16 | 78.2 |
Msa0591860 | AT5G18240.1 | 41.000 | 100 | 50 | 3 | 168 | 264 | 45 | 138 | 4.17e-16 | 77.8 |
Msa0591860 | AT5G18240.4 | 41.000 | 100 | 50 | 3 | 168 | 264 | 45 | 138 | 4.17e-16 | 77.8 |
Msa0591860 | AT5G18240.2 | 41.000 | 100 | 50 | 3 | 168 | 264 | 45 | 138 | 4.34e-16 | 77.8 |
Msa0591860 | AT5G18240.3 | 41.000 | 100 | 50 | 3 | 168 | 264 | 45 | 138 | 4.34e-16 | 77.8 |
Msa0591860 | AT5G18240.5 | 41.000 | 100 | 50 | 3 | 168 | 264 | 45 | 138 | 4.55e-16 | 77.8 |
Msa0591860 | AT5G29000.4 | 41.176 | 102 | 52 | 3 | 120 | 220 | 190 | 284 | 1.47e-15 | 75.5 |
Msa0591860 | AT5G29000.2 | 41.176 | 102 | 52 | 3 | 120 | 220 | 190 | 284 | 1.49e-15 | 76.3 |
Msa0591860 | AT5G29000.1 | 41.176 | 102 | 52 | 3 | 120 | 220 | 147 | 241 | 1.59e-15 | 75.9 |
Msa0591860 | AT5G29000.3 | 41.176 | 102 | 52 | 3 | 120 | 220 | 147 | 241 | 1.59e-15 | 75.9 |
Msa0591860 | AT5G59570.2 | 46.835 | 79 | 39 | 1 | 147 | 225 | 123 | 198 | 3.06e-15 | 74.7 |
Msa0591860 | AT5G59570.1 | 46.835 | 79 | 39 | 1 | 147 | 225 | 123 | 198 | 3.06e-15 | 74.7 |
Msa0591860 | AT2G01060.1 | 49.398 | 83 | 40 | 2 | 157 | 238 | 4 | 85 | 3.22e-15 | 74.3 |
Msa0591860 | AT3G04030.2 | 57.407 | 54 | 23 | 0 | 168 | 221 | 45 | 98 | 3.31e-15 | 75.1 |
Msa0591860 | AT5G05090.1 | 44.444 | 90 | 38 | 2 | 136 | 225 | 61 | 138 | 4.35e-15 | 73.6 |
Msa0591860 | AT3G46640.3 | 42.553 | 94 | 51 | 1 | 144 | 237 | 123 | 213 | 5.01e-15 | 74.3 |
Msa0591860 | AT3G46640.2 | 42.553 | 94 | 51 | 1 | 144 | 237 | 123 | 213 | 6.03e-15 | 73.9 |
Msa0591860 | AT3G46640.1 | 42.553 | 94 | 51 | 1 | 144 | 237 | 123 | 213 | 6.03e-15 | 73.9 |
Msa0591860 | AT3G10760.1 | 50.000 | 72 | 34 | 1 | 154 | 225 | 93 | 162 | 9.50e-15 | 73.6 |
Msa0591860 | AT3G04450.1 | 50.794 | 63 | 30 | 1 | 159 | 220 | 229 | 291 | 1.57e-14 | 73.6 |
Msa0591860 | AT3G04450.3 | 50.794 | 63 | 30 | 1 | 159 | 220 | 229 | 291 | 1.74e-14 | 72.4 |
Msa0591860 | AT3G04450.4 | 50.794 | 63 | 30 | 1 | 159 | 220 | 189 | 251 | 1.79e-14 | 73.2 |
Msa0591860 | AT3G04450.2 | 50.794 | 63 | 30 | 1 | 159 | 220 | 189 | 251 | 1.79e-14 | 73.2 |
Msa0591860 | AT2G40970.1 | 54.237 | 59 | 27 | 0 | 167 | 225 | 104 | 162 | 2.30e-14 | 71.2 |
Msa0591860 | AT4G13640.2 | 41.584 | 101 | 40 | 3 | 168 | 267 | 37 | 119 | 7.96e-14 | 70.5 |
Msa0591860 | AT5G44190.1 | 58.621 | 58 | 24 | 0 | 167 | 224 | 146 | 203 | 8.03e-14 | 71.2 |
Msa0591860 | AT4G13640.1 | 41.584 | 101 | 40 | 3 | 168 | 267 | 37 | 119 | 8.21e-14 | 70.5 |
Msa0591860 | AT5G44190.2 | 58.621 | 58 | 24 | 0 | 167 | 224 | 146 | 203 | 9.12e-14 | 70.9 |
Msa0591860 | AT4G28610.1 | 60.000 | 55 | 21 | 1 | 168 | 221 | 225 | 279 | 1.85e-13 | 70.1 |
Msa0591860 | AT1G69580.1 | 40.230 | 87 | 46 | 2 | 168 | 253 | 34 | 115 | 4.20e-13 | 68.9 |
Msa0591860 | AT1G69580.2 | 40.230 | 87 | 46 | 2 | 168 | 253 | 34 | 115 | 4.47e-13 | 68.6 |
Msa0591860 | AT3G24120.1 | 37.755 | 98 | 52 | 2 | 168 | 256 | 41 | 138 | 7.38e-13 | 67.8 |
Msa0591860 | AT3G24120.2 | 37.755 | 98 | 52 | 2 | 168 | 256 | 41 | 138 | 7.70e-13 | 67.8 |
Msa0591860 | AT1G25550.1 | 46.914 | 81 | 42 | 1 | 148 | 227 | 189 | 269 | 1.14e-12 | 67.4 |
Msa0591860 | AT2G20570.1 | 56.897 | 58 | 25 | 0 | 167 | 224 | 152 | 209 | 1.27e-12 | 67.8 |
Msa0591860 | AT5G06800.3 | 58.182 | 55 | 22 | 1 | 168 | 221 | 192 | 246 | 1.77e-12 | 66.6 |
Msa0591860 | AT1G14600.1 | 61.538 | 52 | 19 | 1 | 170 | 220 | 25 | 76 | 2.15e-12 | 65.9 |
Msa0591860 | AT3G13040.3 | 42.857 | 91 | 44 | 3 | 160 | 248 | 232 | 316 | 2.16e-12 | 67.0 |
Msa0591860 | AT3G13040.1 | 42.857 | 91 | 44 | 3 | 160 | 248 | 232 | 316 | 2.16e-12 | 67.0 |
Msa0591860 | AT3G13040.2 | 42.857 | 91 | 44 | 3 | 160 | 248 | 232 | 316 | 2.16e-12 | 67.0 |
Msa0591860 | AT5G06800.2 | 58.182 | 55 | 22 | 1 | 168 | 221 | 192 | 246 | 3.00e-12 | 66.6 |
Msa0591860 | AT5G06800.1 | 58.182 | 55 | 22 | 1 | 168 | 221 | 192 | 246 | 3.21e-12 | 66.2 |
Msa0591860 | AT2G40260.1 | 55.357 | 56 | 24 | 1 | 166 | 220 | 80 | 135 | 4.76e-12 | 65.9 |
Msa0591860 | AT3G12730.1 | 37.755 | 98 | 58 | 2 | 168 | 264 | 23 | 118 | 4.84e-12 | 64.7 |
Msa0591860 | AT2G20570.2 | 58.182 | 55 | 23 | 0 | 170 | 224 | 171 | 225 | 8.18e-12 | 65.5 |
Msa0591860 | AT2G20400.1 | 59.259 | 54 | 21 | 1 | 168 | 220 | 231 | 284 | 8.29e-12 | 65.1 |
Msa0591860 | AT2G20400.2 | 59.259 | 54 | 21 | 1 | 168 | 220 | 231 | 284 | 8.39e-12 | 65.1 |
Msa0591860 | AT1G79430.2 | 42.529 | 87 | 44 | 2 | 168 | 253 | 34 | 115 | 9.66e-12 | 65.1 |
Msa0591860 | AT4G18020.8 | 47.692 | 65 | 34 | 0 | 168 | 232 | 296 | 360 | 1.08e-11 | 65.1 |
Msa0591860 | AT4G18020.11 | 47.692 | 65 | 34 | 0 | 168 | 232 | 296 | 360 | 1.08e-11 | 65.1 |
Msa0591860 | AT4G18020.4 | 47.692 | 65 | 34 | 0 | 168 | 232 | 296 | 360 | 1.08e-11 | 65.1 |
Msa0591860 | AT4G18020.5 | 47.692 | 65 | 34 | 0 | 168 | 232 | 296 | 360 | 1.08e-11 | 65.1 |
Msa0591860 | AT4G18020.10 | 47.692 | 65 | 34 | 0 | 168 | 232 | 296 | 360 | 1.08e-11 | 65.1 |
Msa0591860 | AT4G18020.7 | 47.692 | 65 | 34 | 0 | 168 | 232 | 296 | 360 | 1.08e-11 | 65.1 |
Msa0591860 | AT4G18020.3 | 47.692 | 65 | 34 | 0 | 168 | 232 | 296 | 360 | 1.10e-11 | 65.1 |
Msa0591860 | AT4G18020.2 | 47.692 | 65 | 34 | 0 | 168 | 232 | 296 | 360 | 1.10e-11 | 65.1 |
Msa0591860 | AT4G18020.1 | 47.692 | 65 | 34 | 0 | 168 | 232 | 296 | 360 | 1.10e-11 | 65.1 |
Msa0591860 | AT4G18020.6 | 47.692 | 65 | 34 | 0 | 168 | 232 | 296 | 360 | 1.10e-11 | 65.1 |
Msa0591860 | AT4G18020.9 | 47.692 | 65 | 34 | 0 | 168 | 232 | 296 | 360 | 1.10e-11 | 65.1 |
Msa0591860 | AT4G04605.1 | 51.786 | 56 | 26 | 1 | 166 | 220 | 12 | 67 | 2.08e-11 | 62.8 |
Msa0591860 | AT5G45580.1 | 41.250 | 80 | 46 | 1 | 164 | 242 | 3 | 82 | 3.85e-11 | 62.4 |
Msa0591860 | AT2G03500.1 | 50.000 | 62 | 30 | 1 | 167 | 227 | 232 | 293 | 4.07e-11 | 63.2 |
Msa0591860 | AT5G45580.2 | 41.250 | 80 | 46 | 1 | 164 | 242 | 19 | 98 | 4.20e-11 | 62.4 |
Msa0591860 | AT2G38300.1 | 48.214 | 56 | 28 | 1 | 166 | 220 | 52 | 107 | 8.18e-11 | 62.0 |
Find 71 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCATTCCCTGCTGGTCTA+AGG | 0.235965 | 4_2:+16770298 | Msa0591860:CDS |
CAAAGTGATTCTCAAAATTA+TGG | 0.246433 | 4_2:+16771138 | Msa0591860:CDS |
ACATGTTGCTAGTCATTTAC+AGG | 0.286115 | 4_2:+16771183 | Msa0591860:CDS |
AACTGCATCAACGATTTCTA+TGG | 0.292867 | 4_2:+16770991 | Msa0591860:CDS |
ATCCTACCTTTACAACCTTA+TGG | 0.307805 | 4_2:+16771472 | Msa0591860:CDS |
CTCAAAATTATGGATGTTCC+TGG | 0.317981 | 4_2:+16771148 | Msa0591860:CDS |
CTAAGAATTCTTTAATTAAA+CGG | 0.349796 | 4_2:-16771503 | None:intergenic |
TTCTGATGCCTTGTACTTGT+TGG | 0.368775 | 4_2:+16770498 | Msa0591860:CDS |
AGAAATCGTTGATGCAGTTC+TGG | 0.372917 | 4_2:-16770987 | None:intergenic |
TGAGTTGTAGGGTAACATTT+TGG | 0.373812 | 4_2:-16770591 | None:intergenic |
CACATATTGGACTAAGCCTT+TGG | 0.377509 | 4_2:+16770791 | Msa0591860:CDS |
AATTATGGATGTTCCTGGTT+TGG | 0.386251 | 4_2:+16771153 | Msa0591860:CDS |
ATTATGGATGTTCCTGGTTT+GGG | 0.388266 | 4_2:+16771154 | Msa0591860:CDS |
ATCAGAAGCTGTATTGCATT+TGG | 0.403201 | 4_2:-16770482 | None:intergenic |
TCTTTAATTAAACGGCATCT+AGG | 0.403700 | 4_2:-16771495 | None:intergenic |
CTTGTACTTGTTGGGAAGAA+AGG | 0.405355 | 4_2:+16770507 | Msa0591860:CDS |
CTGAATGGATTGATCAGAAT+CGG | 0.412574 | 4_2:+16771408 | Msa0591860:CDS |
ATGATGGGTTGTCAATGAAA+TGG | 0.416234 | 4_2:-16770281 | None:intergenic |
AATAAAGAATATGAAATTGT+TGG | 0.416766 | 4_2:+16770870 | Msa0591860:CDS |
TCTGATGCCTTGTACTTGTT+GGG | 0.417590 | 4_2:+16770499 | Msa0591860:CDS |
AATGTCGTTTGCAGAAATAT+AGG | 0.426550 | 4_2:+16771312 | Msa0591860:intron |
AATGTGGGGCTTGCACATAT+TGG | 0.439955 | 4_2:+16770778 | Msa0591860:CDS |
TTCTGGCGACCAAGACAAAC+GGG | 0.460294 | 4_2:-16770970 | None:intergenic |
CTTAGACCAGCAGGGAATGA+TGG | 0.461231 | 4_2:-16770297 | None:intergenic |
AAGTCATAAACATCCATGTT+TGG | 0.465091 | 4_2:-16770565 | None:intergenic |
AAAAGATACACATGCAAAGA+AGG | 0.470493 | 4_2:+16770947 | Msa0591860:CDS |
CTTTCTTCCCAACAAGTACA+AGG | 0.472135 | 4_2:-16770506 | None:intergenic |
CAAAGAAGGCCCGTTTGTCT+TGG | 0.473177 | 4_2:+16770961 | Msa0591860:CDS |
TACTGTTCTTAACACTATTG+AGG | 0.477508 | 4_2:+16770344 | Msa0591860:CDS |
AACAGTAATGTCATGATCAA+TGG | 0.479830 | 4_2:-16770328 | None:intergenic |
ACGATGACTTTCTAGCTGAA+TGG | 0.481545 | 4_2:+16771432 | Msa0591860:CDS |
AATGAATTCTTACTAATGAC+AGG | 0.483696 | 4_2:-16770619 | None:intergenic |
GATGTTCCTGGTTTGGGTGT+AGG | 0.487511 | 4_2:+16771160 | Msa0591860:CDS |
GAATGGATTGACTGTGGGGC+GGG | 0.487587 | 4_2:+16771449 | Msa0591860:CDS |
TAGCTGAATGGATTGACTGT+GGG | 0.492334 | 4_2:+16771444 | Msa0591860:CDS |
GTTCTGGCGACCAAGACAAA+CGG | 0.493157 | 4_2:-16770971 | None:intergenic |
GCAATAACCCTTAGACCAGC+AGG | 0.494502 | 4_2:-16770306 | None:intergenic |
TAAACGGCATCTAGGCCATA+AGG | 0.496018 | 4_2:-16771487 | None:intergenic |
TTATGACGTCTATTCAATGT+GGG | 0.503265 | 4_2:+16770763 | Msa0591860:CDS |
AGACGTCATAACAGAACATT+CGG | 0.504101 | 4_2:-16770751 | None:intergenic |
AGGAAAGAATCATACTATCA+AGG | 0.510494 | 4_2:-16771031 | None:intergenic |
TAGGATTCATTTGAAGAGAT+CGG | 0.515087 | 4_2:+16771331 | Msa0591860:CDS |
ATCATTCCCTGCTGGTCTAA+GGG | 0.515223 | 4_2:+16770299 | Msa0591860:CDS |
ATATGAAATTGTTGGAAGCT+CGG | 0.515274 | 4_2:+16770878 | Msa0591860:CDS |
TGTAATCGATATCATTATCA+AGG | 0.517908 | 4_2:+16770372 | Msa0591860:CDS |
CTATGGGCTGTCAATCAACT+AGG | 0.518108 | 4_2:+16771008 | Msa0591860:CDS |
GTGATAGCTCTCAAGCTGAA+TGG | 0.519299 | 4_2:+16771393 | Msa0591860:CDS |
TTGACATCTTCTTCAACCAA+AGG | 0.530905 | 4_2:-16770807 | None:intergenic |
GACAACCCATCATTCCCTGC+TGG | 0.534739 | 4_2:+16770291 | Msa0591860:CDS |
TGATGGGTTGTCAATGAAAT+GGG | 0.537362 | 4_2:-16770280 | None:intergenic |
TGAATGGATTGATCAGAATC+GGG | 0.540922 | 4_2:+16771409 | Msa0591860:CDS |
GTTATGACGTCTATTCAATG+TGG | 0.541555 | 4_2:+16770762 | Msa0591860:CDS |
TTAGACCAGCAGGGAATGAT+GGG | 0.555312 | 4_2:-16770296 | None:intergenic |
TCTAGGCCATAAGGTTGTAA+AGG | 0.556671 | 4_2:-16771478 | None:intergenic |
TGGCGACATGTTGTCAGAAA+CGG | 0.580385 | 4_2:+16770837 | Msa0591860:CDS |
CTAGCTGAATGGATTGACTG+TGG | 0.582882 | 4_2:+16771443 | Msa0591860:CDS |
ACTGCATCAACGATTTCTAT+GGG | 0.587946 | 4_2:+16770992 | Msa0591860:CDS |
GGCCATAAGGTTGTAAAGGT+AGG | 0.602949 | 4_2:-16771474 | None:intergenic |
TGATGCTCATATGCCAAACA+TGG | 0.604750 | 4_2:+16770552 | Msa0591860:CDS |
ACATGTCCTACACCCAAACC+AGG | 0.611300 | 4_2:-16771166 | None:intergenic |
AGCTGAATGGATTGACTGTG+GGG | 0.620097 | 4_2:+16771445 | Msa0591860:CDS |
CGTCATAACAGAACATTCGG+TGG | 0.637182 | 4_2:-16770748 | None:intergenic |
TCGGCTGACAAAACAAAACA+CGG | 0.641210 | 4_2:+16771350 | Msa0591860:CDS |
AAGAAGATGTCAAGATCATG+TGG | 0.649836 | 4_2:+16770817 | Msa0591860:CDS |
TATGACGTCTATTCAATGTG+GGG | 0.656901 | 4_2:+16770764 | Msa0591860:CDS |
TGAATGGATTGACTGTGGGG+CGG | 0.657142 | 4_2:+16771448 | Msa0591860:CDS |
CGGCTGACAAAACAAAACAC+GGG | 0.658379 | 4_2:+16771351 | Msa0591860:CDS |
CAATAACCCTTAGACCAGCA+GGG | 0.674733 | 4_2:-16770305 | None:intergenic |
GACATGTTGTCAGAAACGGT+TGG | 0.696935 | 4_2:+16770841 | Msa0591860:CDS |
TGAAATTGTTGGAAGCTCGG+TGG | 0.733305 | 4_2:+16770881 | Msa0591860:CDS |
GTTGCAGAAAATAGAAAACG+AGG | 0.747338 | 4_2:+16770903 | Msa0591860:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAGAATATGAAATTGT+TGG | + | chr4_2:16770870-16770889 | Msa0591860:CDS | 15.0% |
!! | AATAAAGAATATGAAATTGT+TGG | + | chr4_2:16770870-16770889 | Msa0591860:CDS | 15.0% |
!!! | TTATTTCTGTTTTTTAGTGA+TGG | + | chr4_2:16770716-16770735 | Msa0591860:intron | 20.0% |
!!! | ATAATTTTGAGAATCACTTT+GGG | - | chr4_2:16771139-16771158 | None:intergenic | 20.0% |
!!! | TTATTTCTGTTTTTTAGTGA+TGG | + | chr4_2:16770716-16770735 | Msa0591860:intron | 20.0% |
!!! | ATAATTTTGAGAATCACTTT+GGG | - | chr4_2:16771139-16771158 | None:intergenic | 20.0% |
! | TGTAATCGATATCATTATCA+AGG | + | chr4_2:16770372-16770391 | Msa0591860:CDS | 25.0% |
!!! | ACACACTTTAGAATTGAATA+AGG | - | chr4_2:16770419-16770438 | None:intergenic | 25.0% |
! | AATGAATTCTTACTAATGAC+AGG | - | chr4_2:16770622-16770641 | None:intergenic | 25.0% |
! | ACAAAGCAAAGAAAAGAATT+AGG | - | chr4_2:16771054-16771073 | None:intergenic | 25.0% |
!!! | CATAATTTTGAGAATCACTT+TGG | - | chr4_2:16771140-16771159 | None:intergenic | 25.0% |
! | CAAAGTGATTCTCAAAATTA+TGG | + | chr4_2:16771138-16771157 | Msa0591860:CDS | 25.0% |
! | TGTAATCGATATCATTATCA+AGG | + | chr4_2:16770372-16770391 | Msa0591860:CDS | 25.0% |
!!! | ACACACTTTAGAATTGAATA+AGG | - | chr4_2:16770419-16770438 | None:intergenic | 25.0% |
! | AATGAATTCTTACTAATGAC+AGG | - | chr4_2:16770622-16770641 | None:intergenic | 25.0% |
! | ACAAAGCAAAGAAAAGAATT+AGG | - | chr4_2:16771054-16771073 | None:intergenic | 25.0% |
!!! | CATAATTTTGAGAATCACTT+TGG | - | chr4_2:16771140-16771159 | None:intergenic | 25.0% |
! | CAAAGTGATTCTCAAAATTA+TGG | + | chr4_2:16771138-16771157 | Msa0591860:CDS | 25.0% |
AACAGTAATGTCATGATCAA+TGG | - | chr4_2:16770331-16770350 | None:intergenic | 30.0% | |
TACTGTTCTTAACACTATTG+AGG | + | chr4_2:16770344-16770363 | Msa0591860:CDS | 30.0% | |
AAGTCATAAACATCCATGTT+TGG | - | chr4_2:16770568-16770587 | None:intergenic | 30.0% | |
TTATGACGTCTATTCAATGT+GGG | + | chr4_2:16770763-16770782 | Msa0591860:CDS | 30.0% | |
ATATGAAATTGTTGGAAGCT+CGG | + | chr4_2:16770878-16770897 | Msa0591860:CDS | 30.0% | |
! | TTTGCATGTGTATCTTTTGA+GGG | - | chr4_2:16770945-16770964 | None:intergenic | 30.0% |
AAAAGATACACATGCAAAGA+AGG | + | chr4_2:16770947-16770966 | Msa0591860:CDS | 30.0% | |
AGGAAAGAATCATACTATCA+AGG | - | chr4_2:16771034-16771053 | None:intergenic | 30.0% | |
!! | GTCATTTACAGGTTTGTTTT+CGG | + | chr4_2:16771194-16771213 | Msa0591860:intron | 30.0% |
! | AATGTCGTTTGCAGAAATAT+AGG | + | chr4_2:16771312-16771331 | Msa0591860:intron | 30.0% |
TAGGATTCATTTGAAGAGAT+CGG | + | chr4_2:16771331-16771350 | Msa0591860:CDS | 30.0% | |
AACAGTAATGTCATGATCAA+TGG | - | chr4_2:16770331-16770350 | None:intergenic | 30.0% | |
TACTGTTCTTAACACTATTG+AGG | + | chr4_2:16770344-16770363 | Msa0591860:CDS | 30.0% | |
AAGTCATAAACATCCATGTT+TGG | - | chr4_2:16770568-16770587 | None:intergenic | 30.0% | |
TTATGACGTCTATTCAATGT+GGG | + | chr4_2:16770763-16770782 | Msa0591860:CDS | 30.0% | |
ATATGAAATTGTTGGAAGCT+CGG | + | chr4_2:16770878-16770897 | Msa0591860:CDS | 30.0% | |
! | TTTGCATGTGTATCTTTTGA+GGG | - | chr4_2:16770945-16770964 | None:intergenic | 30.0% |
AAAAGATACACATGCAAAGA+AGG | + | chr4_2:16770947-16770966 | Msa0591860:CDS | 30.0% | |
AGGAAAGAATCATACTATCA+AGG | - | chr4_2:16771034-16771053 | None:intergenic | 30.0% | |
!! | GTCATTTACAGGTTTGTTTT+CGG | + | chr4_2:16771194-16771213 | Msa0591860:intron | 30.0% |
! | AATGTCGTTTGCAGAAATAT+AGG | + | chr4_2:16771312-16771331 | Msa0591860:intron | 30.0% |
TAGGATTCATTTGAAGAGAT+CGG | + | chr4_2:16771331-16771350 | Msa0591860:CDS | 30.0% | |
!! | TGATGGGTTGTCAATGAAAT+GGG | - | chr4_2:16770283-16770302 | None:intergenic | 35.0% |
!! | ATGATGGGTTGTCAATGAAA+TGG | - | chr4_2:16770284-16770303 | None:intergenic | 35.0% |
ATCAGAAGCTGTATTGCATT+TGG | - | chr4_2:16770485-16770504 | None:intergenic | 35.0% | |
! | TGAGTTGTAGGGTAACATTT+TGG | - | chr4_2:16770594-16770613 | None:intergenic | 35.0% |
!!! | GACAGGAATTTTGAGTTGTA+GGG | - | chr4_2:16770605-16770624 | None:intergenic | 35.0% |
!!! | TGACAGGAATTTTGAGTTGT+AGG | - | chr4_2:16770606-16770625 | None:intergenic | 35.0% |
AGACGTCATAACAGAACATT+CGG | - | chr4_2:16770754-16770773 | None:intergenic | 35.0% | |
GTTATGACGTCTATTCAATG+TGG | + | chr4_2:16770762-16770781 | Msa0591860:CDS | 35.0% | |
TATGACGTCTATTCAATGTG+GGG | + | chr4_2:16770764-16770783 | Msa0591860:CDS | 35.0% | |
TTGACATCTTCTTCAACCAA+AGG | - | chr4_2:16770810-16770829 | None:intergenic | 35.0% | |
AAGAAGATGTCAAGATCATG+TGG | + | chr4_2:16770817-16770836 | Msa0591860:CDS | 35.0% | |
GTTGCAGAAAATAGAAAACG+AGG | + | chr4_2:16770903-16770922 | Msa0591860:CDS | 35.0% | |
! | TTGCATGTGTATCTTTTGAG+GGG | - | chr4_2:16770944-16770963 | None:intergenic | 35.0% |
! | CTTTGCATGTGTATCTTTTG+AGG | - | chr4_2:16770946-16770965 | None:intergenic | 35.0% |
AACTGCATCAACGATTTCTA+TGG | + | chr4_2:16770991-16771010 | Msa0591860:CDS | 35.0% | |
ACTGCATCAACGATTTCTAT+GGG | + | chr4_2:16770992-16771011 | Msa0591860:CDS | 35.0% | |
CTCAAAATTATGGATGTTCC+TGG | + | chr4_2:16771148-16771167 | Msa0591860:CDS | 35.0% | |
AATTATGGATGTTCCTGGTT+TGG | + | chr4_2:16771153-16771172 | Msa0591860:CDS | 35.0% | |
ATTATGGATGTTCCTGGTTT+GGG | + | chr4_2:16771154-16771173 | Msa0591860:CDS | 35.0% | |
ACATGTTGCTAGTCATTTAC+AGG | + | chr4_2:16771183-16771202 | Msa0591860:CDS | 35.0% | |
!! | TTTACAGGTTTGTTTTCGGA+AGG | + | chr4_2:16771198-16771217 | Msa0591860:intron | 35.0% |
ACGGGAAGAAAAAAACTAAG+TGG | + | chr4_2:16771369-16771388 | Msa0591860:CDS | 35.0% | |
!! | CTGAATGGATTGATCAGAAT+CGG | + | chr4_2:16771408-16771427 | Msa0591860:CDS | 35.0% |
!! | TGAATGGATTGATCAGAATC+GGG | + | chr4_2:16771409-16771428 | Msa0591860:CDS | 35.0% |
ATCCTACCTTTACAACCTTA+TGG | + | chr4_2:16771472-16771491 | Msa0591860:CDS | 35.0% | |
!! | TGATGGGTTGTCAATGAAAT+GGG | - | chr4_2:16770283-16770302 | None:intergenic | 35.0% |
!! | ATGATGGGTTGTCAATGAAA+TGG | - | chr4_2:16770284-16770303 | None:intergenic | 35.0% |
ATCAGAAGCTGTATTGCATT+TGG | - | chr4_2:16770485-16770504 | None:intergenic | 35.0% | |
! | TGAGTTGTAGGGTAACATTT+TGG | - | chr4_2:16770594-16770613 | None:intergenic | 35.0% |
!!! | GACAGGAATTTTGAGTTGTA+GGG | - | chr4_2:16770605-16770624 | None:intergenic | 35.0% |
!!! | TGACAGGAATTTTGAGTTGT+AGG | - | chr4_2:16770606-16770625 | None:intergenic | 35.0% |
AGACGTCATAACAGAACATT+CGG | - | chr4_2:16770754-16770773 | None:intergenic | 35.0% | |
GTTATGACGTCTATTCAATG+TGG | + | chr4_2:16770762-16770781 | Msa0591860:CDS | 35.0% | |
TATGACGTCTATTCAATGTG+GGG | + | chr4_2:16770764-16770783 | Msa0591860:CDS | 35.0% | |
TTGACATCTTCTTCAACCAA+AGG | - | chr4_2:16770810-16770829 | None:intergenic | 35.0% | |
AAGAAGATGTCAAGATCATG+TGG | + | chr4_2:16770817-16770836 | Msa0591860:CDS | 35.0% | |
GTTGCAGAAAATAGAAAACG+AGG | + | chr4_2:16770903-16770922 | Msa0591860:CDS | 35.0% | |
! | TTGCATGTGTATCTTTTGAG+GGG | - | chr4_2:16770944-16770963 | None:intergenic | 35.0% |
! | CTTTGCATGTGTATCTTTTG+AGG | - | chr4_2:16770946-16770965 | None:intergenic | 35.0% |
AACTGCATCAACGATTTCTA+TGG | + | chr4_2:16770991-16771010 | Msa0591860:CDS | 35.0% | |
ACTGCATCAACGATTTCTAT+GGG | + | chr4_2:16770992-16771011 | Msa0591860:CDS | 35.0% | |
CTCAAAATTATGGATGTTCC+TGG | + | chr4_2:16771148-16771167 | Msa0591860:CDS | 35.0% | |
AATTATGGATGTTCCTGGTT+TGG | + | chr4_2:16771153-16771172 | Msa0591860:CDS | 35.0% | |
ATTATGGATGTTCCTGGTTT+GGG | + | chr4_2:16771154-16771173 | Msa0591860:CDS | 35.0% | |
ACATGTTGCTAGTCATTTAC+AGG | + | chr4_2:16771183-16771202 | Msa0591860:CDS | 35.0% | |
!! | TTTACAGGTTTGTTTTCGGA+AGG | + | chr4_2:16771198-16771217 | Msa0591860:intron | 35.0% |
ACGGGAAGAAAAAAACTAAG+TGG | + | chr4_2:16771369-16771388 | Msa0591860:CDS | 35.0% | |
!! | CTGAATGGATTGATCAGAAT+CGG | + | chr4_2:16771408-16771427 | Msa0591860:CDS | 35.0% |
!! | TGAATGGATTGATCAGAATC+GGG | + | chr4_2:16771409-16771428 | Msa0591860:CDS | 35.0% |
ATCCTACCTTTACAACCTTA+TGG | + | chr4_2:16771472-16771491 | Msa0591860:CDS | 35.0% | |
TTCTGATGCCTTGTACTTGT+TGG | + | chr4_2:16770498-16770517 | Msa0591860:CDS | 40.0% | |
TCTGATGCCTTGTACTTGTT+GGG | + | chr4_2:16770499-16770518 | Msa0591860:CDS | 40.0% | |
CTTTCTTCCCAACAAGTACA+AGG | - | chr4_2:16770509-16770528 | None:intergenic | 40.0% | |
! | CTTGTACTTGTTGGGAAGAA+AGG | + | chr4_2:16770507-16770526 | Msa0591860:CDS | 40.0% |
TGATGCTCATATGCCAAACA+TGG | + | chr4_2:16770552-16770571 | Msa0591860:CDS | 40.0% | |
CACATATTGGACTAAGCCTT+TGG | + | chr4_2:16770791-16770810 | Msa0591860:CDS | 40.0% | |
AGAAATCGTTGATGCAGTTC+TGG | - | chr4_2:16770990-16771009 | None:intergenic | 40.0% | |
TCGGCTGACAAAACAAAACA+CGG | + | chr4_2:16771350-16771369 | Msa0591860:CDS | 40.0% | |
!! | ACGATGACTTTCTAGCTGAA+TGG | + | chr4_2:16771432-16771451 | Msa0591860:CDS | 40.0% |
!! | TAGCTGAATGGATTGACTGT+GGG | + | chr4_2:16771444-16771463 | Msa0591860:CDS | 40.0% |
TCTAGGCCATAAGGTTGTAA+AGG | - | chr4_2:16771481-16771500 | None:intergenic | 40.0% | |
TTCTGATGCCTTGTACTTGT+TGG | + | chr4_2:16770498-16770517 | Msa0591860:CDS | 40.0% | |
TCTGATGCCTTGTACTTGTT+GGG | + | chr4_2:16770499-16770518 | Msa0591860:CDS | 40.0% | |
CTTTCTTCCCAACAAGTACA+AGG | - | chr4_2:16770509-16770528 | None:intergenic | 40.0% | |
! | CTTGTACTTGTTGGGAAGAA+AGG | + | chr4_2:16770507-16770526 | Msa0591860:CDS | 40.0% |
TGATGCTCATATGCCAAACA+TGG | + | chr4_2:16770552-16770571 | Msa0591860:CDS | 40.0% | |
CACATATTGGACTAAGCCTT+TGG | + | chr4_2:16770791-16770810 | Msa0591860:CDS | 40.0% | |
AGAAATCGTTGATGCAGTTC+TGG | - | chr4_2:16770990-16771009 | None:intergenic | 40.0% | |
TCGGCTGACAAAACAAAACA+CGG | + | chr4_2:16771350-16771369 | Msa0591860:CDS | 40.0% | |
!! | ACGATGACTTTCTAGCTGAA+TGG | + | chr4_2:16771432-16771451 | Msa0591860:CDS | 40.0% |
!! | TAGCTGAATGGATTGACTGT+GGG | + | chr4_2:16771444-16771463 | Msa0591860:CDS | 40.0% |
TCTAGGCCATAAGGTTGTAA+AGG | - | chr4_2:16771481-16771500 | None:intergenic | 40.0% | |
TTAGACCAGCAGGGAATGAT+GGG | - | chr4_2:16770299-16770318 | None:intergenic | 45.0% | |
! | ATCATTCCCTGCTGGTCTAA+GGG | + | chr4_2:16770299-16770318 | Msa0591860:CDS | 45.0% |
CAATAACCCTTAGACCAGCA+GGG | - | chr4_2:16770308-16770327 | None:intergenic | 45.0% | |
CGTCATAACAGAACATTCGG+TGG | - | chr4_2:16770751-16770770 | None:intergenic | 45.0% | |
AATGTGGGGCTTGCACATAT+TGG | + | chr4_2:16770778-16770797 | Msa0591860:CDS | 45.0% | |
TGGCGACATGTTGTCAGAAA+CGG | + | chr4_2:16770837-16770856 | Msa0591860:CDS | 45.0% | |
GACATGTTGTCAGAAACGGT+TGG | + | chr4_2:16770841-16770860 | Msa0591860:CDS | 45.0% | |
TGAAATTGTTGGAAGCTCGG+TGG | + | chr4_2:16770881-16770900 | Msa0591860:CDS | 45.0% | |
! | CTATGGGCTGTCAATCAACT+AGG | + | chr4_2:16771008-16771027 | Msa0591860:CDS | 45.0% |
CGGCTGACAAAACAAAACAC+GGG | + | chr4_2:16771351-16771370 | Msa0591860:CDS | 45.0% | |
GTGATAGCTCTCAAGCTGAA+TGG | + | chr4_2:16771393-16771412 | Msa0591860:CDS | 45.0% | |
!! | CTAGCTGAATGGATTGACTG+TGG | + | chr4_2:16771443-16771462 | Msa0591860:CDS | 45.0% |
!! | AGCTGAATGGATTGACTGTG+GGG | + | chr4_2:16771445-16771464 | Msa0591860:CDS | 45.0% |
GGCCATAAGGTTGTAAAGGT+AGG | - | chr4_2:16771477-16771496 | None:intergenic | 45.0% | |
TAAACGGCATCTAGGCCATA+AGG | - | chr4_2:16771490-16771509 | None:intergenic | 45.0% | |
TTAGACCAGCAGGGAATGAT+GGG | - | chr4_2:16770299-16770318 | None:intergenic | 45.0% | |
! | ATCATTCCCTGCTGGTCTAA+GGG | + | chr4_2:16770299-16770318 | Msa0591860:CDS | 45.0% |
CAATAACCCTTAGACCAGCA+GGG | - | chr4_2:16770308-16770327 | None:intergenic | 45.0% | |
CGTCATAACAGAACATTCGG+TGG | - | chr4_2:16770751-16770770 | None:intergenic | 45.0% | |
AATGTGGGGCTTGCACATAT+TGG | + | chr4_2:16770778-16770797 | Msa0591860:CDS | 45.0% | |
TGGCGACATGTTGTCAGAAA+CGG | + | chr4_2:16770837-16770856 | Msa0591860:CDS | 45.0% | |
GACATGTTGTCAGAAACGGT+TGG | + | chr4_2:16770841-16770860 | Msa0591860:CDS | 45.0% | |
TGAAATTGTTGGAAGCTCGG+TGG | + | chr4_2:16770881-16770900 | Msa0591860:CDS | 45.0% | |
! | CTATGGGCTGTCAATCAACT+AGG | + | chr4_2:16771008-16771027 | Msa0591860:CDS | 45.0% |
CGGCTGACAAAACAAAACAC+GGG | + | chr4_2:16771351-16771370 | Msa0591860:CDS | 45.0% | |
GTGATAGCTCTCAAGCTGAA+TGG | + | chr4_2:16771393-16771412 | Msa0591860:CDS | 45.0% | |
!! | CTAGCTGAATGGATTGACTG+TGG | + | chr4_2:16771443-16771462 | Msa0591860:CDS | 45.0% |
!! | AGCTGAATGGATTGACTGTG+GGG | + | chr4_2:16771445-16771464 | Msa0591860:CDS | 45.0% |
GGCCATAAGGTTGTAAAGGT+AGG | - | chr4_2:16771477-16771496 | None:intergenic | 45.0% | |
TAAACGGCATCTAGGCCATA+AGG | - | chr4_2:16771490-16771509 | None:intergenic | 45.0% | |
CTTAGACCAGCAGGGAATGA+TGG | - | chr4_2:16770300-16770319 | None:intergenic | 50.0% | |
! | CATCATTCCCTGCTGGTCTA+AGG | + | chr4_2:16770298-16770317 | Msa0591860:CDS | 50.0% |
GCAATAACCCTTAGACCAGC+AGG | - | chr4_2:16770309-16770328 | None:intergenic | 50.0% | |
CAAAGAAGGCCCGTTTGTCT+TGG | + | chr4_2:16770961-16770980 | Msa0591860:CDS | 50.0% | |
TTCTGGCGACCAAGACAAAC+GGG | - | chr4_2:16770973-16770992 | None:intergenic | 50.0% | |
GTTCTGGCGACCAAGACAAA+CGG | - | chr4_2:16770974-16770993 | None:intergenic | 50.0% | |
!! | GATGTTCCTGGTTTGGGTGT+AGG | + | chr4_2:16771160-16771179 | Msa0591860:CDS | 50.0% |
ACATGTCCTACACCCAAACC+AGG | - | chr4_2:16771169-16771188 | None:intergenic | 50.0% | |
!! | TGAATGGATTGACTGTGGGG+CGG | + | chr4_2:16771448-16771467 | Msa0591860:CDS | 50.0% |
CTTAGACCAGCAGGGAATGA+TGG | - | chr4_2:16770300-16770319 | None:intergenic | 50.0% | |
! | CATCATTCCCTGCTGGTCTA+AGG | + | chr4_2:16770298-16770317 | Msa0591860:CDS | 50.0% |
GCAATAACCCTTAGACCAGC+AGG | - | chr4_2:16770309-16770328 | None:intergenic | 50.0% | |
CAAAGAAGGCCCGTTTGTCT+TGG | + | chr4_2:16770961-16770980 | Msa0591860:CDS | 50.0% | |
TTCTGGCGACCAAGACAAAC+GGG | - | chr4_2:16770973-16770992 | None:intergenic | 50.0% | |
GTTCTGGCGACCAAGACAAA+CGG | - | chr4_2:16770974-16770993 | None:intergenic | 50.0% | |
!! | GATGTTCCTGGTTTGGGTGT+AGG | + | chr4_2:16771160-16771179 | Msa0591860:CDS | 50.0% |
ACATGTCCTACACCCAAACC+AGG | - | chr4_2:16771169-16771188 | None:intergenic | 50.0% | |
!! | TGAATGGATTGACTGTGGGG+CGG | + | chr4_2:16771448-16771467 | Msa0591860:CDS | 50.0% |
GACAACCCATCATTCCCTGC+TGG | + | chr4_2:16770291-16770310 | Msa0591860:CDS | 55.0% | |
!! | GAATGGATTGACTGTGGGGC+GGG | + | chr4_2:16771449-16771468 | Msa0591860:CDS | 55.0% |
GACAACCCATCATTCCCTGC+TGG | + | chr4_2:16770291-16770310 | Msa0591860:CDS | 55.0% | |
!! | GAATGGATTGACTGTGGGGC+GGG | + | chr4_2:16771449-16771468 | Msa0591860:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 16770276 | 16771516 | 16770276 | ID=Msa0591860;Name=Msa0591860 |
chr4_2 | mRNA | 16770276 | 16771516 | 16770276 | ID=Msa0591860-mRNA-1;Parent=Msa0591860;Name=Msa0591860-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.25|0.2|1|1|1|5|17|274 |
chr4_2 | exon | 16770276 | 16770393 | 16770276 | ID=Msa0591860-mRNA-1:exon:4811;Parent=Msa0591860-mRNA-1 |
chr4_2 | exon | 16770479 | 16770628 | 16770479 | ID=Msa0591860-mRNA-1:exon:4812;Parent=Msa0591860-mRNA-1 |
chr4_2 | exon | 16770733 | 16771038 | 16770733 | ID=Msa0591860-mRNA-1:exon:4813;Parent=Msa0591860-mRNA-1 |
chr4_2 | exon | 16771128 | 16771204 | 16771128 | ID=Msa0591860-mRNA-1:exon:4814;Parent=Msa0591860-mRNA-1 |
chr4_2 | exon | 16771326 | 16771516 | 16771326 | ID=Msa0591860-mRNA-1:exon:4815;Parent=Msa0591860-mRNA-1 |
chr4_2 | CDS | 16770276 | 16770393 | 16770276 | ID=Msa0591860-mRNA-1:cds;Parent=Msa0591860-mRNA-1 |
chr4_2 | CDS | 16770479 | 16770628 | 16770479 | ID=Msa0591860-mRNA-1:cds;Parent=Msa0591860-mRNA-1 |
chr4_2 | CDS | 16770733 | 16771038 | 16770733 | ID=Msa0591860-mRNA-1:cds;Parent=Msa0591860-mRNA-1 |
chr4_2 | CDS | 16771128 | 16771204 | 16771128 | ID=Msa0591860-mRNA-1:cds;Parent=Msa0591860-mRNA-1 |
chr4_2 | CDS | 16771326 | 16771499 | 16771326 | ID=Msa0591860-mRNA-1:cds;Parent=Msa0591860-mRNA-1 |
chr4_2 | three_prime_UTR | 16771500 | 16771516 | 16771500 | ID=Msa0591860-mRNA-1:three_prime_utr;Parent=Msa0591860-mRNA-1 |
Gene Sequence |
Protein sequence |