Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591970 | XP_013455021.2 | 86.901 | 313 | 39 | 1 | 1 | 313 | 1 | 311 | 0.0 | 569 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591970 | sp|Q8L9Y3|ARR14_ARATH | 38.403 | 263 | 121 | 5 | 7 | 232 | 4 | 262 | 2.16e-53 | 182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0591970 | TF | GARP-ARR-B |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591970 | MtrunA17_Chr4g0009851 | 84.076 | 314 | 47 | 2 | 1 | 313 | 1 | 312 | 0.0 | 544 |
| Msa0591970 | MtrunA17_Chr4g0009981 | 86.207 | 261 | 34 | 1 | 53 | 313 | 1 | 259 | 8.27e-169 | 469 |
| Msa0591970 | MtrunA17_Chr4g0009901 | 75.207 | 242 | 58 | 1 | 1 | 242 | 1 | 240 | 2.05e-128 | 367 |
| Msa0591970 | MtrunA17_Chr4g0011071 | 78.571 | 140 | 28 | 1 | 55 | 194 | 35 | 172 | 4.16e-74 | 225 |
| Msa0591970 | MtrunA17_Chr6g0471041 | 46.075 | 293 | 139 | 8 | 10 | 296 | 14 | 293 | 1.78e-69 | 221 |
| Msa0591970 | MtrunA17_Chr1g0161431 | 37.808 | 365 | 160 | 9 | 10 | 309 | 11 | 373 | 1.85e-67 | 222 |
| Msa0591970 | MtrunA17_Chr4g0009991 | 78.992 | 119 | 22 | 2 | 101 | 219 | 1 | 116 | 5.38e-58 | 182 |
| Msa0591970 | MtrunA17_Chr3g0123131 | 39.526 | 253 | 120 | 5 | 10 | 231 | 13 | 263 | 1.94e-55 | 189 |
| Msa0591970 | MtrunA17_Chr8g0376881 | 39.313 | 262 | 126 | 6 | 9 | 239 | 24 | 283 | 8.48e-55 | 186 |
| Msa0591970 | MtrunA17_Chr2g0294911 | 38.868 | 265 | 134 | 4 | 10 | 248 | 29 | 291 | 1.12e-53 | 184 |
| Msa0591970 | MtrunA17_Chr4g0067981 | 38.491 | 265 | 134 | 4 | 10 | 248 | 31 | 292 | 1.15e-53 | 186 |
| Msa0591970 | MtrunA17_Chr4g0010001 | 83.146 | 89 | 15 | 0 | 1 | 89 | 1 | 89 | 4.44e-51 | 164 |
| Msa0591970 | MtrunA17_Chr8g0391911 | 39.669 | 242 | 118 | 4 | 4 | 219 | 3 | 242 | 1.31e-50 | 168 |
| Msa0591970 | MtrunA17_Chr1g0149841 | 38.800 | 250 | 119 | 4 | 7 | 226 | 2 | 247 | 4.47e-49 | 170 |
| Msa0591970 | MtrunA17_Chr7g0275401 | 37.200 | 250 | 130 | 5 | 7 | 229 | 2 | 251 | 6.27e-49 | 165 |
| Msa0591970 | MtrunA17_Chr5g0423031 | 80.899 | 89 | 17 | 0 | 1 | 89 | 1 | 89 | 2.18e-47 | 157 |
| Msa0591970 | MtrunA17_Chr8g0383961 | 43.644 | 236 | 100 | 7 | 1 | 231 | 1 | 208 | 4.95e-47 | 159 |
| Msa0591970 | MtrunA17_Chr7g0275891 | 34.050 | 279 | 143 | 5 | 7 | 244 | 2 | 280 | 2.41e-45 | 157 |
| Msa0591970 | MtrunA17_Chr3g0137101 | 37.247 | 247 | 125 | 3 | 10 | 226 | 8 | 254 | 4.16e-45 | 162 |
| Msa0591970 | MtrunA17_Chr4g0074401 | 32.661 | 248 | 141 | 4 | 10 | 231 | 17 | 264 | 4.34e-41 | 150 |
| Msa0591970 | MtrunA17_Chr6g0456631 | 43.750 | 160 | 86 | 2 | 4 | 161 | 3 | 160 | 6.20e-41 | 140 |
| Msa0591970 | MtrunA17_Chr4g0074411 | 32.258 | 248 | 145 | 4 | 9 | 233 | 17 | 264 | 2.00e-40 | 149 |
| Msa0591970 | MtrunA17_Chr1g0149851 | 33.582 | 268 | 137 | 4 | 7 | 233 | 2 | 269 | 2.33e-40 | 147 |
| Msa0591970 | MtrunA17_Chr2g0304841 | 33.725 | 255 | 134 | 4 | 10 | 229 | 18 | 272 | 3.29e-40 | 149 |
| Msa0591970 | MtrunA17_Chr3g0134461 | 36.792 | 212 | 105 | 4 | 10 | 219 | 8 | 192 | 2.64e-37 | 132 |
| Msa0591970 | MtrunA17_Chr3g0134481 | 35.160 | 219 | 102 | 4 | 4 | 221 | 4 | 183 | 1.05e-35 | 127 |
| Msa0591970 | MtrunA17_Chr4g0074421 | 35.912 | 181 | 96 | 3 | 59 | 219 | 2 | 182 | 1.12e-34 | 125 |
| Msa0591970 | MtrunA17_Chr1g0149831 | 37.000 | 200 | 88 | 5 | 68 | 236 | 1 | 193 | 5.28e-31 | 116 |
| Msa0591970 | MtrunA17_Chr8g0350761 | 23.810 | 357 | 212 | 10 | 12 | 309 | 19 | 374 | 3.35e-22 | 96.7 |
| Msa0591970 | MtrunA17_Chr6g0473731 | 32.468 | 154 | 86 | 2 | 89 | 231 | 10 | 156 | 2.20e-19 | 88.2 |
| Msa0591970 | MtrunA17_Chr5g0417521 | 55.556 | 54 | 23 | 1 | 170 | 222 | 15 | 68 | 1.48e-13 | 70.5 |
| Msa0591970 | MtrunA17_Chr6g0461641 | 46.154 | 78 | 41 | 1 | 170 | 246 | 42 | 119 | 2.11e-13 | 70.1 |
| Msa0591970 | MtrunA17_Chr2g0324891 | 38.298 | 94 | 55 | 2 | 135 | 226 | 125 | 217 | 2.21e-13 | 70.1 |
| Msa0591970 | MtrunA17_Chr2g0321461 | 55.556 | 54 | 23 | 1 | 170 | 222 | 45 | 98 | 1.20e-12 | 67.8 |
| Msa0591970 | MtrunA17_Chr4g0042451 | 51.852 | 54 | 25 | 1 | 170 | 222 | 17 | 70 | 2.32e-12 | 66.6 |
| Msa0591970 | MtrunA17_Chr7g0255711 | 50.000 | 58 | 29 | 0 | 169 | 226 | 90 | 147 | 2.35e-12 | 66.6 |
| Msa0591970 | MtrunA17_Chr7g0261911 | 44.186 | 86 | 45 | 3 | 161 | 245 | 253 | 336 | 2.69e-12 | 67.0 |
| Msa0591970 | MtrunA17_Chr5g0400241 | 37.500 | 80 | 50 | 0 | 169 | 248 | 310 | 389 | 4.71e-12 | 66.6 |
| Msa0591970 | MtrunA17_Chr4g0040481 | 48.276 | 58 | 30 | 0 | 169 | 226 | 157 | 214 | 5.02e-12 | 66.2 |
| Msa0591970 | MtrunA17_Chr4g0031961 | 48.276 | 58 | 30 | 0 | 169 | 226 | 130 | 187 | 5.37e-12 | 65.5 |
| Msa0591970 | MtrunA17_Chr7g0254981 | 39.560 | 91 | 52 | 2 | 168 | 257 | 48 | 136 | 1.23e-11 | 64.3 |
| Msa0591970 | MtrunA17_Chr7g0274471 | 46.479 | 71 | 34 | 2 | 170 | 236 | 218 | 288 | 3.32e-11 | 63.9 |
| Msa0591970 | MtrunA17_Chr4g0054981 | 36.145 | 83 | 53 | 0 | 169 | 251 | 309 | 391 | 5.82e-11 | 63.2 |
| Msa0591970 | MtrunA17_Chr1g0190301 | 44.872 | 78 | 41 | 2 | 166 | 242 | 171 | 247 | 5.90e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591970 | AT2G01760.1 | 38.403 | 263 | 121 | 5 | 7 | 232 | 4 | 262 | 2.20e-54 | 182 |
| Msa0591970 | AT1G67710.1 | 39.700 | 267 | 125 | 8 | 11 | 243 | 8 | 272 | 6.85e-52 | 179 |
| Msa0591970 | AT3G16857.1 | 36.364 | 308 | 138 | 11 | 10 | 259 | 33 | 340 | 3.07e-49 | 174 |
| Msa0591970 | AT3G16857.2 | 36.364 | 308 | 138 | 11 | 10 | 259 | 33 | 340 | 4.29e-49 | 174 |
| Msa0591970 | AT2G01760.2 | 35.052 | 291 | 120 | 7 | 7 | 232 | 4 | 290 | 1.78e-48 | 167 |
| Msa0591970 | AT4G31920.1 | 35.622 | 233 | 140 | 2 | 10 | 232 | 13 | 245 | 3.62e-44 | 159 |
| Msa0591970 | AT2G25180.1 | 38.333 | 240 | 124 | 6 | 10 | 226 | 13 | 251 | 2.77e-42 | 154 |
| Msa0591970 | AT3G16857.3 | 34.572 | 269 | 118 | 9 | 49 | 259 | 2 | 270 | 5.16e-38 | 142 |
| Msa0591970 | AT5G58080.1 | 36.614 | 254 | 127 | 7 | 10 | 236 | 14 | 260 | 9.20e-38 | 142 |
| Msa0591970 | AT1G67710.2 | 39.713 | 209 | 91 | 7 | 68 | 243 | 1 | 207 | 2.18e-34 | 130 |
| Msa0591970 | AT2G01760.3 | 35.821 | 201 | 89 | 4 | 68 | 232 | 1 | 197 | 5.91e-34 | 127 |
| Msa0591970 | AT3G62670.1 | 30.627 | 271 | 158 | 9 | 28 | 272 | 53 | 319 | 6.32e-32 | 123 |
| Msa0591970 | AT5G49240.1 | 30.508 | 236 | 139 | 5 | 9 | 219 | 37 | 272 | 2.51e-31 | 119 |
| Msa0591970 | AT1G49190.1 | 27.734 | 256 | 154 | 6 | 10 | 234 | 30 | 285 | 3.05e-28 | 113 |
| Msa0591970 | AT1G67710.3 | 38.095 | 189 | 82 | 7 | 88 | 243 | 12 | 198 | 1.94e-25 | 105 |
| Msa0591970 | AT5G07210.2 | 27.407 | 270 | 142 | 7 | 14 | 231 | 16 | 283 | 7.35e-24 | 102 |
| Msa0591970 | AT5G07210.1 | 26.619 | 278 | 142 | 8 | 14 | 231 | 16 | 291 | 2.16e-21 | 95.1 |
| Msa0591970 | AT2G27070.1 | 25.000 | 264 | 141 | 8 | 14 | 222 | 16 | 277 | 4.80e-18 | 85.1 |
| Msa0591970 | AT1G49190.2 | 32.258 | 124 | 83 | 1 | 10 | 132 | 30 | 153 | 1.55e-17 | 83.6 |
| Msa0591970 | AT5G29000.2 | 38.053 | 113 | 61 | 4 | 135 | 245 | 203 | 308 | 1.80e-14 | 73.9 |
| Msa0591970 | AT5G29000.1 | 38.053 | 113 | 61 | 4 | 135 | 245 | 160 | 265 | 1.88e-14 | 73.6 |
| Msa0591970 | AT5G29000.3 | 38.053 | 113 | 61 | 4 | 135 | 245 | 160 | 265 | 1.88e-14 | 73.6 |
| Msa0591970 | AT5G29000.4 | 39.623 | 106 | 55 | 4 | 135 | 238 | 203 | 301 | 2.04e-14 | 73.2 |
| Msa0591970 | AT3G04030.1 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 2.48e-13 | 70.5 |
| Msa0591970 | AT3G04030.3 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 2.86e-13 | 70.1 |
| Msa0591970 | AT5G59570.2 | 43.421 | 76 | 40 | 1 | 151 | 226 | 125 | 197 | 4.05e-13 | 68.9 |
| Msa0591970 | AT5G59570.1 | 43.421 | 76 | 40 | 1 | 151 | 226 | 125 | 197 | 4.05e-13 | 68.9 |
| Msa0591970 | AT3G04030.2 | 54.717 | 53 | 24 | 0 | 170 | 222 | 45 | 97 | 4.92e-13 | 69.7 |
| Msa0591970 | AT5G18240.2 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 4.92e-13 | 69.7 |
| Msa0591970 | AT5G18240.3 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 4.92e-13 | 69.7 |
| Msa0591970 | AT5G18240.1 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 5.40e-13 | 69.3 |
| Msa0591970 | AT5G18240.4 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 5.40e-13 | 69.3 |
| Msa0591970 | AT5G18240.5 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 5.42e-13 | 69.3 |
| Msa0591970 | AT3G46640.3 | 44.444 | 81 | 42 | 2 | 146 | 226 | 123 | 200 | 8.69e-13 | 68.6 |
| Msa0591970 | AT3G46640.2 | 44.444 | 81 | 42 | 2 | 146 | 226 | 123 | 200 | 9.66e-13 | 68.2 |
| Msa0591970 | AT3G46640.1 | 44.444 | 81 | 42 | 2 | 146 | 226 | 123 | 200 | 9.66e-13 | 68.2 |
| Msa0591970 | AT5G05090.1 | 43.820 | 89 | 38 | 3 | 138 | 226 | 61 | 137 | 1.01e-12 | 67.4 |
| Msa0591970 | AT5G44190.1 | 48.333 | 60 | 31 | 0 | 167 | 226 | 144 | 203 | 1.33e-12 | 68.2 |
| Msa0591970 | AT5G44190.2 | 48.333 | 60 | 31 | 0 | 167 | 226 | 144 | 203 | 1.41e-12 | 67.8 |
| Msa0591970 | AT2G40970.1 | 48.276 | 58 | 30 | 0 | 169 | 226 | 104 | 161 | 2.21e-12 | 66.2 |
| Msa0591970 | AT3G10760.1 | 50.000 | 58 | 29 | 0 | 169 | 226 | 104 | 161 | 2.96e-12 | 67.0 |
| Msa0591970 | AT4G28610.1 | 45.349 | 86 | 43 | 3 | 170 | 252 | 225 | 309 | 5.56e-12 | 66.2 |
| Msa0591970 | AT3G24120.1 | 49.231 | 65 | 32 | 1 | 170 | 233 | 41 | 105 | 1.53e-11 | 64.3 |
| Msa0591970 | AT3G24120.2 | 49.231 | 65 | 32 | 1 | 170 | 233 | 41 | 105 | 1.62e-11 | 64.3 |
| Msa0591970 | AT3G04450.3 | 29.870 | 154 | 93 | 6 | 84 | 222 | 138 | 291 | 1.90e-11 | 64.3 |
| Msa0591970 | AT1G69580.1 | 51.852 | 54 | 25 | 1 | 170 | 222 | 34 | 87 | 1.97e-11 | 64.3 |
| Msa0591970 | AT1G69580.2 | 51.852 | 54 | 25 | 1 | 170 | 222 | 34 | 87 | 2.15e-11 | 64.3 |
| Msa0591970 | AT2G01060.1 | 47.692 | 65 | 33 | 1 | 159 | 222 | 4 | 68 | 2.96e-11 | 63.5 |
| Msa0591970 | AT3G04450.1 | 46.552 | 58 | 30 | 1 | 166 | 222 | 234 | 291 | 3.43e-11 | 64.3 |
| Msa0591970 | AT3G04450.4 | 46.552 | 58 | 30 | 1 | 166 | 222 | 194 | 251 | 3.54e-11 | 63.9 |
| Msa0591970 | AT3G04450.2 | 46.552 | 58 | 30 | 1 | 166 | 222 | 194 | 251 | 3.54e-11 | 63.9 |
| Msa0591970 | AT2G20570.1 | 46.552 | 58 | 31 | 0 | 169 | 226 | 152 | 209 | 8.33e-11 | 62.8 |
Find 58 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATTGTGTCGCAGAATTC+AGG | 0.268438 | 4_2:+16961876 | None:intergenic |
| ACATATTGCCAGCCATTTAC+AGG | 0.282271 | 4_2:-16962374 | Msa0591970:intron |
| TTCAGTTACCAAATGTAGTA+TGG | 0.293347 | 4_2:-16963099 | Msa0591970:intron |
| CAACGACATTGGGTGGAAAT+TGG | 0.345706 | 4_2:-16961836 | Msa0591970:CDS |
| TGAGTTGTAGGGTAACATTT+TGG | 0.376494 | 4_2:+16962982 | None:intergenic |
| GATAAATCATCATCAACATA+TGG | 0.380393 | 4_2:+16961764 | None:intergenic |
| AATGTGGGGCTTGCGAATAT+TGG | 0.385194 | 4_2:-16962786 | Msa0591970:CDS |
| GTCAATCAACTAGGCCTTGA+TGG | 0.391531 | 4_2:-16962541 | Msa0591970:intron |
| TGACAGGAATGTTGAGTTGT+AGG | 0.408636 | 4_2:+16962970 | None:intergenic |
| ATCAGAAGCCATACTACATT+TGG | 0.409595 | 4_2:+16963091 | None:intergenic |
| AATAAAGAATATGAAATTGT+TGG | 0.416766 | 4_2:-16962688 | Msa0591970:CDS |
| CTTTCTTTCCAACATGTTGA+AGG | 0.419409 | 4_2:+16963067 | None:intergenic |
| CAAAGAAGGCCCGTTTGTCT+TGG | 0.435563 | 4_2:-16962597 | Msa0591970:CDS |
| AAAAGAAACACTTGCAAAGA+AGG | 0.435703 | 4_2:-16962611 | Msa0591970:CDS |
| GGTTCAAGAAAATAGAAAAC+GGG | 0.441425 | 4_2:-16962656 | Msa0591970:CDS |
| TTGCGATGCACAACGACATT+GGG | 0.452490 | 4_2:-16961846 | Msa0591970:CDS |
| TTGAGACCGGCTGGGAATGA+TGG | 0.453544 | 4_2:+16963295 | None:intergenic |
| CTTCAACATGTTGGAAAGAA+AGG | 0.459586 | 4_2:-16963066 | Msa0591970:CDS |
| AATAAATTCTTACTAATGAC+AGG | 0.461511 | 4_2:+16962954 | None:intergenic |
| ACATCTCCTCAATAGAGTTA+AGG | 0.467190 | 4_2:+16963242 | None:intergenic |
| TTCTCGTGACCAAGACAAAC+GGG | 0.467708 | 4_2:+16962588 | None:intergenic |
| TCAACATATGGGAACAAGTT+GGG | 0.468173 | 4_2:+16961776 | None:intergenic |
| TACTCACTCAATGCCGGAGC+AGG | 0.473606 | 4_2:-16961912 | Msa0591970:CDS |
| GCAATAACCTTGAGACCGGC+TGG | 0.475576 | 4_2:+16963286 | None:intergenic |
| AAAAGTGTTGCTCATAATGT+TGG | 0.490442 | 4_2:+16961808 | None:intergenic |
| AAGTCATAAACATCCATGTC+TGG | 0.491105 | 4_2:+16963008 | None:intergenic |
| TGGTTCAAGAAAATAGAAAA+CGG | 0.501089 | 4_2:-16962657 | Msa0591970:CDS |
| ATATGAAATTGTTGGAAGCT+CGG | 0.515274 | 4_2:-16962680 | Msa0591970:CDS |
| ATTGCGATGCACAACGACAT+TGG | 0.516098 | 4_2:-16961847 | Msa0591970:CDS |
| TGTAATCGATATCATTATCA+AGG | 0.517908 | 4_2:-16963220 | Msa0591970:intron |
| ATCATGAAATCTATTGAATG+TGG | 0.519581 | 4_2:-16962802 | Msa0591970:CDS |
| GACAGGAATGTTGAGTTGTA+GGG | 0.519779 | 4_2:+16962971 | None:intergenic |
| TCATGAAATCTATTGAATGT+GGG | 0.521948 | 4_2:-16962801 | Msa0591970:CDS |
| ATTCTCGTGACCAAGACAAA+CGG | 0.526657 | 4_2:+16962587 | None:intergenic |
| AAAATGAACCTGTAAATGGC+TGG | 0.527802 | 4_2:+16962366 | None:intergenic |
| TTCTGATGCCTTCAACATGT+TGG | 0.527887 | 4_2:-16963075 | Msa0591970:CDS |
| CATGTTGCAAGAATTAGAAA+CGG | 0.528421 | 4_2:-16962721 | Msa0591970:CDS |
| CACTCTCCTTAACTCTATTG+AGG | 0.546467 | 4_2:-16963248 | Msa0591970:CDS |
| CTACGTGCAGTCAATCAACT+AGG | 0.547867 | 4_2:-16962550 | Msa0591970:CDS |
| ATAAATCATCATCAACATAT+GGG | 0.548211 | 4_2:+16961765 | None:intergenic |
| AGAAAACTCTGGTCCTGCTC+CGG | 0.548712 | 4_2:+16961899 | None:intergenic |
| ATCATTCCCAGCCGGTCTCA+AGG | 0.552068 | 4_2:-16963293 | Msa0591970:CDS |
| ATCAACATATGGGAACAAGT+TGG | 0.563419 | 4_2:+16961775 | None:intergenic |
| CATGAAATCTATTGAATGTG+GGG | 0.577494 | 4_2:-16962800 | Msa0591970:CDS |
| TGAGACCGGCTGGGAATGAT+GGG | 0.577892 | 4_2:+16963296 | None:intergenic |
| AGGAAAGAATCATACCATCA+AGG | 0.580027 | 4_2:+16962527 | None:intergenic |
| CGATGCACAACGACATTGGG+TGG | 0.580466 | 4_2:-16961843 | Msa0591970:CDS |
| AATTGCAATAACCTTGAGAC+CGG | 0.581075 | 4_2:+16963282 | None:intergenic |
| AGAAGCTACTCACTCAATGC+CGG | 0.591913 | 4_2:-16961918 | Msa0591970:CDS |
| CAGAATTCAGGAGAAAACTC+TGG | 0.602905 | 4_2:+16961888 | None:intergenic |
| CAATAACCTTGAGACCGGCT+GGG | 0.613963 | 4_2:+16963287 | None:intergenic |
| GACAACCCATCATTCCCAGC+CGG | 0.620153 | 4_2:-16963301 | Msa0591970:CDS |
| TGATGCTCATATGCCAGACA+TGG | 0.629107 | 4_2:-16963021 | Msa0591970:CDS |
| CAACAGAAGAGACAGAAGGT+AGG | 0.641230 | 4_2:-16961985 | Msa0591970:CDS |
| AGCTCAACAGAAGAGACAGA+AGG | 0.643732 | 4_2:-16961989 | Msa0591970:CDS |
| TGAAATTGTTGGAAGCTCGG+TGG | 0.670504 | 4_2:-16962677 | Msa0591970:CDS |
| ATGATTTATCATCACTTGTG+TGG | 0.696325 | 4_2:-16961751 | Msa0591970:CDS |
| GTTCAAGAAAATAGAAAACG+GGG | 0.742093 | 4_2:-16962655 | Msa0591970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAGAATATGAAATTGT+TGG | - | chr4_2:16962376-16962395 | Msa0591970:CDS | 15.0% |
| !!! | AATATGTTCTTTTTTCATAT+CGG | + | chr4_2:16962677-16962696 | None:intergenic | 15.0% |
| !!! | TGATTTTAAACTGAAATTTA+TGG | - | chr4_2:16962990-16963009 | Msa0591970:CDS | 15.0% |
| !! | AATAAAGAATATGAAATTGT+TGG | - | chr4_2:16962376-16962395 | Msa0591970:CDS | 15.0% |
| !!! | AATATGTTCTTTTTTCATAT+CGG | + | chr4_2:16962677-16962696 | None:intergenic | 15.0% |
| !!! | TGATTTTAAACTGAAATTTA+TGG | - | chr4_2:16962990-16963009 | Msa0591970:CDS | 15.0% |
| !! | AAAAGATGAAAACTTGAATA+AGG | + | chr4_2:16961887-16961906 | None:intergenic | 20.0% |
| !!! | ATTCAAGTTTTCATCTTTTT+TGG | - | chr4_2:16961888-16961907 | Msa0591970:CDS | 20.0% |
| !! | CAATATAAGAATAAACAAAC+AGG | + | chr4_2:16961940-16961959 | None:intergenic | 20.0% |
| !! | AATAAATTCTTACTAATGAC+AGG | + | chr4_2:16962113-16962132 | None:intergenic | 20.0% |
| !!! | ATATTTCTTTTTTGTAGTGA+TGG | - | chr4_2:16962216-16962235 | Msa0591970:intron | 20.0% |
| !! | AGCATAGTAAAAAAGTAATT+AGG | + | chr4_2:16962560-16962579 | None:intergenic | 20.0% |
| !!! | ATGTTTTTCTCTTAATTTTC+AGG | - | chr4_2:16962613-16962632 | Msa0591970:CDS | 20.0% |
| !!! | TGTTTTTCTCTTAATTTTCA+GGG | - | chr4_2:16962614-16962633 | Msa0591970:CDS | 20.0% |
| !!! | ATATGTTCTTTTTTCATATC+GGG | + | chr4_2:16962676-16962695 | None:intergenic | 20.0% |
| !!! | TTTTGCAGAAATATAGAAAT+CGG | - | chr4_2:16963046-16963065 | Msa0591970:CDS | 20.0% |
| !! | ATAAATCATCATCAACATAT+GGG | + | chr4_2:16963302-16963321 | None:intergenic | 20.0% |
| !! | AAAAGATGAAAACTTGAATA+AGG | + | chr4_2:16961887-16961906 | None:intergenic | 20.0% |
| !!! | ATTCAAGTTTTCATCTTTTT+TGG | - | chr4_2:16961888-16961907 | Msa0591970:CDS | 20.0% |
| !! | CAATATAAGAATAAACAAAC+AGG | + | chr4_2:16961940-16961959 | None:intergenic | 20.0% |
| !! | AATAAATTCTTACTAATGAC+AGG | + | chr4_2:16962113-16962132 | None:intergenic | 20.0% |
| !!! | ATATTTCTTTTTTGTAGTGA+TGG | - | chr4_2:16962216-16962235 | Msa0591970:intron | 20.0% |
| !! | AGCATAGTAAAAAAGTAATT+AGG | + | chr4_2:16962560-16962579 | None:intergenic | 20.0% |
| !!! | ATGTTTTTCTCTTAATTTTC+AGG | - | chr4_2:16962613-16962632 | Msa0591970:CDS | 20.0% |
| !!! | TGTTTTTCTCTTAATTTTCA+GGG | - | chr4_2:16962614-16962633 | Msa0591970:CDS | 20.0% |
| !!! | ATATGTTCTTTTTTCATATC+GGG | + | chr4_2:16962676-16962695 | None:intergenic | 20.0% |
| !!! | TTTTGCAGAAATATAGAAAT+CGG | - | chr4_2:16963046-16963065 | Msa0591970:CDS | 20.0% |
| !! | ATAAATCATCATCAACATAT+GGG | + | chr4_2:16963302-16963321 | None:intergenic | 20.0% |
| ! | TGTAATCGATATCATTATCA+AGG | - | chr4_2:16961844-16961863 | Msa0591970:CDS | 25.0% |
| !! | TTTCATGATAGAACTTTTTG+TGG | + | chr4_2:16962251-16962270 | None:intergenic | 25.0% |
| ! | ATCATGAAATCTATTGAATG+TGG | - | chr4_2:16962262-16962281 | Msa0591970:intron | 25.0% |
| ! | TCATGAAATCTATTGAATGT+GGG | - | chr4_2:16962263-16962282 | Msa0591970:intron | 25.0% |
| ! | TGGTTCAAGAAAATAGAAAA+CGG | - | chr4_2:16962407-16962426 | Msa0591970:CDS | 25.0% |
| !! | GTTTTTCTCTTAATTTTCAG+GGG | - | chr4_2:16962615-16962634 | Msa0591970:CDS | 25.0% |
| !! | ATGATTTTCAGAATCGTTTT+TGG | + | chr4_2:16962646-16962665 | None:intergenic | 25.0% |
| !! | AAAAACGATTCTGAAAATCA+TGG | - | chr4_2:16962645-16962664 | Msa0591970:CDS | 25.0% |
| ! | TACAAAAATGAACCTGTAAA+TGG | + | chr4_2:16962705-16962724 | None:intergenic | 25.0% |
| !!! | AAGTCAAATTTTGTTTCAAG+AGG | + | chr4_2:16963126-16963145 | None:intergenic | 25.0% |
| ! | GATAAATCATCATCAACATA+TGG | + | chr4_2:16963303-16963322 | None:intergenic | 25.0% |
| ! | TGTAATCGATATCATTATCA+AGG | - | chr4_2:16961844-16961863 | Msa0591970:CDS | 25.0% |
| !! | TTTCATGATAGAACTTTTTG+TGG | + | chr4_2:16962251-16962270 | None:intergenic | 25.0% |
| ! | ATCATGAAATCTATTGAATG+TGG | - | chr4_2:16962262-16962281 | Msa0591970:intron | 25.0% |
| ! | TCATGAAATCTATTGAATGT+GGG | - | chr4_2:16962263-16962282 | Msa0591970:intron | 25.0% |
| ! | TGGTTCAAGAAAATAGAAAA+CGG | - | chr4_2:16962407-16962426 | Msa0591970:CDS | 25.0% |
| !! | GTTTTTCTCTTAATTTTCAG+GGG | - | chr4_2:16962615-16962634 | Msa0591970:CDS | 25.0% |
| !! | ATGATTTTCAGAATCGTTTT+TGG | + | chr4_2:16962646-16962665 | None:intergenic | 25.0% |
| !! | AAAAACGATTCTGAAAATCA+TGG | - | chr4_2:16962645-16962664 | Msa0591970:CDS | 25.0% |
| ! | TACAAAAATGAACCTGTAAA+TGG | + | chr4_2:16962705-16962724 | None:intergenic | 25.0% |
| !!! | AAGTCAAATTTTGTTTCAAG+AGG | + | chr4_2:16963126-16963145 | None:intergenic | 25.0% |
| ! | GATAAATCATCATCAACATA+TGG | + | chr4_2:16963303-16963322 | None:intergenic | 25.0% |
| TTCAGTTACCAAATGTAGTA+TGG | - | chr4_2:16961965-16961984 | Msa0591970:CDS | 30.0% | |
| CATGAAATCTATTGAATGTG+GGG | - | chr4_2:16962264-16962283 | Msa0591970:intron | 30.0% | |
| TAAGCCTTTGATTGAAAAAG+AGG | - | chr4_2:16962303-16962322 | Msa0591970:intron | 30.0% | |
| !!! | TTGACCTCTTTTTCAATCAA+AGG | + | chr4_2:16962310-16962329 | None:intergenic | 30.0% |
| CATGTTGCAAGAATTAGAAA+CGG | - | chr4_2:16962343-16962362 | Msa0591970:intron | 30.0% | |
| ATATGAAATTGTTGGAAGCT+CGG | - | chr4_2:16962384-16962403 | Msa0591970:CDS | 30.0% | |
| GGTTCAAGAAAATAGAAAAC+GGG | - | chr4_2:16962408-16962427 | Msa0591970:CDS | 30.0% | |
| GTTCAAGAAAATAGAAAACG+GGG | - | chr4_2:16962409-16962428 | Msa0591970:CDS | 30.0% | |
| AAAAGAAACACTTGCAAAGA+AGG | - | chr4_2:16962453-16962472 | Msa0591970:intron | 30.0% | |
| AACTGAGAAACTATAGACTT+AGG | + | chr4_2:16962766-16962785 | None:intergenic | 30.0% | |
| TGATTTACAACAACAGACTT+AGG | + | chr4_2:16962797-16962816 | None:intergenic | 30.0% | |
| TTGAATAACATGCAAGACTA+AGG | + | chr4_2:16962835-16962854 | None:intergenic | 30.0% | |
| AGTAGCATATTATCAACAAG+AGG | + | chr4_2:16962959-16962978 | None:intergenic | 30.0% | |
| !! | AAAAGTGTTGCTCATAATGT+TGG | + | chr4_2:16963259-16963278 | None:intergenic | 30.0% |
| ATGATTTATCATCACTTGTG+TGG | - | chr4_2:16963313-16963332 | Msa0591970:CDS | 30.0% | |
| TTCAGTTACCAAATGTAGTA+TGG | - | chr4_2:16961965-16961984 | Msa0591970:CDS | 30.0% | |
| CATGAAATCTATTGAATGTG+GGG | - | chr4_2:16962264-16962283 | Msa0591970:intron | 30.0% | |
| TAAGCCTTTGATTGAAAAAG+AGG | - | chr4_2:16962303-16962322 | Msa0591970:intron | 30.0% | |
| !!! | TTGACCTCTTTTTCAATCAA+AGG | + | chr4_2:16962310-16962329 | None:intergenic | 30.0% |
| CATGTTGCAAGAATTAGAAA+CGG | - | chr4_2:16962343-16962362 | Msa0591970:intron | 30.0% | |
| ATATGAAATTGTTGGAAGCT+CGG | - | chr4_2:16962384-16962403 | Msa0591970:CDS | 30.0% | |
| GGTTCAAGAAAATAGAAAAC+GGG | - | chr4_2:16962408-16962427 | Msa0591970:CDS | 30.0% | |
| GTTCAAGAAAATAGAAAACG+GGG | - | chr4_2:16962409-16962428 | Msa0591970:CDS | 30.0% | |
| AAAAGAAACACTTGCAAAGA+AGG | - | chr4_2:16962453-16962472 | Msa0591970:intron | 30.0% | |
| AACTGAGAAACTATAGACTT+AGG | + | chr4_2:16962766-16962785 | None:intergenic | 30.0% | |
| TGATTTACAACAACAGACTT+AGG | + | chr4_2:16962797-16962816 | None:intergenic | 30.0% | |
| TTGAATAACATGCAAGACTA+AGG | + | chr4_2:16962835-16962854 | None:intergenic | 30.0% | |
| AGTAGCATATTATCAACAAG+AGG | + | chr4_2:16962959-16962978 | None:intergenic | 30.0% | |
| !! | AAAAGTGTTGCTCATAATGT+TGG | + | chr4_2:16963259-16963278 | None:intergenic | 30.0% |
| ATGATTTATCATCACTTGTG+TGG | - | chr4_2:16963313-16963332 | Msa0591970:CDS | 30.0% | |
| AATTGCAATAACCTTGAGAC+CGG | + | chr4_2:16961785-16961804 | None:intergenic | 35.0% | |
| ACATCTCCTCAATAGAGTTA+AGG | + | chr4_2:16961825-16961844 | None:intergenic | 35.0% | |
| ATCAGAAGCCATACTACATT+TGG | + | chr4_2:16961976-16961995 | None:intergenic | 35.0% | |
| CTTTCTTTCCAACATGTTGA+AGG | + | chr4_2:16962000-16962019 | None:intergenic | 35.0% | |
| CTTCAACATGTTGGAAAGAA+AGG | - | chr4_2:16961998-16962017 | Msa0591970:CDS | 35.0% | |
| AAGTCATAAACATCCATGTC+TGG | + | chr4_2:16962059-16962078 | None:intergenic | 35.0% | |
| ! | TGAGTTGTAGGGTAACATTT+TGG | + | chr4_2:16962085-16962104 | None:intergenic | 35.0% |
| AAAAAGAGGTCAAGATCATG+TGG | - | chr4_2:16962317-16962336 | Msa0591970:intron | 35.0% | |
| ! | CTTTGCAAGTGTTTCTTTTG+AGG | + | chr4_2:16962452-16962471 | None:intergenic | 35.0% |
| AGGAAAGAATCATACCATCA+AGG | + | chr4_2:16962540-16962559 | None:intergenic | 35.0% | |
| AAAATGAACCTGTAAATGGC+TGG | + | chr4_2:16962701-16962720 | None:intergenic | 35.0% | |
| AGTAGTGAATTATGCAGTCA+TGG | - | chr4_2:16962871-16962890 | Msa0591970:intron | 35.0% | |
| AGAGGATGTATAGAAGCTAA+TGG | + | chr4_2:16962941-16962960 | None:intergenic | 35.0% | |
| TCAACATATGGGAACAAGTT+GGG | + | chr4_2:16963291-16963310 | None:intergenic | 35.0% | |
| ATCAACATATGGGAACAAGT+TGG | + | chr4_2:16963292-16963311 | None:intergenic | 35.0% | |
| AATTGCAATAACCTTGAGAC+CGG | + | chr4_2:16961785-16961804 | None:intergenic | 35.0% | |
| ACATCTCCTCAATAGAGTTA+AGG | + | chr4_2:16961825-16961844 | None:intergenic | 35.0% | |
| ATCAGAAGCCATACTACATT+TGG | + | chr4_2:16961976-16961995 | None:intergenic | 35.0% | |
| CTTTCTTTCCAACATGTTGA+AGG | + | chr4_2:16962000-16962019 | None:intergenic | 35.0% | |
| CTTCAACATGTTGGAAAGAA+AGG | - | chr4_2:16961998-16962017 | Msa0591970:CDS | 35.0% | |
| AAGTCATAAACATCCATGTC+TGG | + | chr4_2:16962059-16962078 | None:intergenic | 35.0% | |
| ! | TGAGTTGTAGGGTAACATTT+TGG | + | chr4_2:16962085-16962104 | None:intergenic | 35.0% |
| AAAAAGAGGTCAAGATCATG+TGG | - | chr4_2:16962317-16962336 | Msa0591970:intron | 35.0% | |
| ! | CTTTGCAAGTGTTTCTTTTG+AGG | + | chr4_2:16962452-16962471 | None:intergenic | 35.0% |
| AGGAAAGAATCATACCATCA+AGG | + | chr4_2:16962540-16962559 | None:intergenic | 35.0% | |
| AAAATGAACCTGTAAATGGC+TGG | + | chr4_2:16962701-16962720 | None:intergenic | 35.0% | |
| AGTAGTGAATTATGCAGTCA+TGG | - | chr4_2:16962871-16962890 | Msa0591970:intron | 35.0% | |
| AGAGGATGTATAGAAGCTAA+TGG | + | chr4_2:16962941-16962960 | None:intergenic | 35.0% | |
| TCAACATATGGGAACAAGTT+GGG | + | chr4_2:16963291-16963310 | None:intergenic | 35.0% | |
| ATCAACATATGGGAACAAGT+TGG | + | chr4_2:16963292-16963311 | None:intergenic | 35.0% | |
| CACTCTCCTTAACTCTATTG+AGG | - | chr4_2:16961816-16961835 | Msa0591970:CDS | 40.0% | |
| TTCTGATGCCTTCAACATGT+TGG | - | chr4_2:16961989-16962008 | Msa0591970:CDS | 40.0% | |
| ! | GACAGGAATGTTGAGTTGTA+GGG | + | chr4_2:16962096-16962115 | None:intergenic | 40.0% |
| ! | TGACAGGAATGTTGAGTTGT+AGG | + | chr4_2:16962097-16962116 | None:intergenic | 40.0% |
| ATTCTCGTGACCAAGACAAA+CGG | + | chr4_2:16962480-16962499 | None:intergenic | 40.0% | |
| ACATATTGCCAGCCATTTAC+AGG | - | chr4_2:16962690-16962709 | Msa0591970:CDS | 40.0% | |
| CAGAATTCAGGAGAAAACTC+TGG | + | chr4_2:16963179-16963198 | None:intergenic | 40.0% | |
| CACTCTCCTTAACTCTATTG+AGG | - | chr4_2:16961816-16961835 | Msa0591970:CDS | 40.0% | |
| TTCTGATGCCTTCAACATGT+TGG | - | chr4_2:16961989-16962008 | Msa0591970:CDS | 40.0% | |
| ! | GACAGGAATGTTGAGTTGTA+GGG | + | chr4_2:16962096-16962115 | None:intergenic | 40.0% |
| ! | TGACAGGAATGTTGAGTTGT+AGG | + | chr4_2:16962097-16962116 | None:intergenic | 40.0% |
| ATTCTCGTGACCAAGACAAA+CGG | + | chr4_2:16962480-16962499 | None:intergenic | 40.0% | |
| ACATATTGCCAGCCATTTAC+AGG | - | chr4_2:16962690-16962709 | Msa0591970:CDS | 40.0% | |
| CAGAATTCAGGAGAAAACTC+TGG | + | chr4_2:16963179-16963198 | None:intergenic | 40.0% | |
| TGATGCTCATATGCCAGACA+TGG | - | chr4_2:16962043-16962062 | Msa0591970:intron | 45.0% | |
| AATGTGGGGCTTGCGAATAT+TGG | - | chr4_2:16962278-16962297 | Msa0591970:intron | 45.0% | |
| TGAAATTGTTGGAAGCTCGG+TGG | - | chr4_2:16962387-16962406 | Msa0591970:CDS | 45.0% | |
| TTCTCGTGACCAAGACAAAC+GGG | + | chr4_2:16962479-16962498 | None:intergenic | 45.0% | |
| CTACGTGCAGTCAATCAACT+AGG | - | chr4_2:16962514-16962533 | Msa0591970:intron | 45.0% | |
| GTCAATCAACTAGGCCTTGA+TGG | - | chr4_2:16962523-16962542 | Msa0591970:intron | 45.0% | |
| AGCTCAACAGAAGAGACAGA+AGG | - | chr4_2:16963075-16963094 | Msa0591970:CDS | 45.0% | |
| CAACAGAAGAGACAGAAGGT+AGG | - | chr4_2:16963079-16963098 | Msa0591970:CDS | 45.0% | |
| AGAAGCTACTCACTCAATGC+CGG | - | chr4_2:16963146-16963165 | Msa0591970:intron | 45.0% | |
| GACATTGTGTCGCAGAATTC+AGG | + | chr4_2:16963191-16963210 | None:intergenic | 45.0% | |
| ATTGCGATGCACAACGACAT+TGG | - | chr4_2:16963217-16963236 | Msa0591970:intron | 45.0% | |
| TTGCGATGCACAACGACATT+GGG | - | chr4_2:16963218-16963237 | Msa0591970:intron | 45.0% | |
| CAACGACATTGGGTGGAAAT+TGG | - | chr4_2:16963228-16963247 | Msa0591970:CDS | 45.0% | |
| TGATGCTCATATGCCAGACA+TGG | - | chr4_2:16962043-16962062 | Msa0591970:intron | 45.0% | |
| AATGTGGGGCTTGCGAATAT+TGG | - | chr4_2:16962278-16962297 | Msa0591970:intron | 45.0% | |
| TGAAATTGTTGGAAGCTCGG+TGG | - | chr4_2:16962387-16962406 | Msa0591970:CDS | 45.0% | |
| TTCTCGTGACCAAGACAAAC+GGG | + | chr4_2:16962479-16962498 | None:intergenic | 45.0% | |
| CTACGTGCAGTCAATCAACT+AGG | - | chr4_2:16962514-16962533 | Msa0591970:intron | 45.0% | |
| GTCAATCAACTAGGCCTTGA+TGG | - | chr4_2:16962523-16962542 | Msa0591970:intron | 45.0% | |
| AGCTCAACAGAAGAGACAGA+AGG | - | chr4_2:16963075-16963094 | Msa0591970:CDS | 45.0% | |
| CAACAGAAGAGACAGAAGGT+AGG | - | chr4_2:16963079-16963098 | Msa0591970:CDS | 45.0% | |
| AGAAGCTACTCACTCAATGC+CGG | - | chr4_2:16963146-16963165 | Msa0591970:intron | 45.0% | |
| GACATTGTGTCGCAGAATTC+AGG | + | chr4_2:16963191-16963210 | None:intergenic | 45.0% | |
| ATTGCGATGCACAACGACAT+TGG | - | chr4_2:16963217-16963236 | Msa0591970:intron | 45.0% | |
| TTGCGATGCACAACGACATT+GGG | - | chr4_2:16963218-16963237 | Msa0591970:intron | 45.0% | |
| CAACGACATTGGGTGGAAAT+TGG | - | chr4_2:16963228-16963247 | Msa0591970:CDS | 45.0% | |
| CAATAACCTTGAGACCGGCT+GGG | + | chr4_2:16961780-16961799 | None:intergenic | 50.0% | |
| CAAAGAAGGCCCGTTTGTCT+TGG | - | chr4_2:16962467-16962486 | Msa0591970:intron | 50.0% | |
| AGAAAACTCTGGTCCTGCTC+CGG | + | chr4_2:16963168-16963187 | None:intergenic | 50.0% | |
| CAATAACCTTGAGACCGGCT+GGG | + | chr4_2:16961780-16961799 | None:intergenic | 50.0% | |
| CAAAGAAGGCCCGTTTGTCT+TGG | - | chr4_2:16962467-16962486 | Msa0591970:intron | 50.0% | |
| AGAAAACTCTGGTCCTGCTC+CGG | + | chr4_2:16963168-16963187 | None:intergenic | 50.0% | |
| GACAACCCATCATTCCCAGC+CGG | - | chr4_2:16961763-16961782 | Msa0591970:CDS | 55.0% | |
| TGAGACCGGCTGGGAATGAT+GGG | + | chr4_2:16961771-16961790 | None:intergenic | 55.0% | |
| TTGAGACCGGCTGGGAATGA+TGG | + | chr4_2:16961772-16961791 | None:intergenic | 55.0% | |
| ATCATTCCCAGCCGGTCTCA+AGG | - | chr4_2:16961771-16961790 | Msa0591970:CDS | 55.0% | |
| GCAATAACCTTGAGACCGGC+TGG | + | chr4_2:16961781-16961800 | None:intergenic | 55.0% | |
| TACTCACTCAATGCCGGAGC+AGG | - | chr4_2:16963152-16963171 | Msa0591970:intron | 55.0% | |
| CGATGCACAACGACATTGGG+TGG | - | chr4_2:16963221-16963240 | Msa0591970:CDS | 55.0% | |
| GACAACCCATCATTCCCAGC+CGG | - | chr4_2:16961763-16961782 | Msa0591970:CDS | 55.0% | |
| TGAGACCGGCTGGGAATGAT+GGG | + | chr4_2:16961771-16961790 | None:intergenic | 55.0% | |
| TTGAGACCGGCTGGGAATGA+TGG | + | chr4_2:16961772-16961791 | None:intergenic | 55.0% | |
| ATCATTCCCAGCCGGTCTCA+AGG | - | chr4_2:16961771-16961790 | Msa0591970:CDS | 55.0% | |
| GCAATAACCTTGAGACCGGC+TGG | + | chr4_2:16961781-16961800 | None:intergenic | 55.0% | |
| TACTCACTCAATGCCGGAGC+AGG | - | chr4_2:16963152-16963171 | Msa0591970:intron | 55.0% | |
| CGATGCACAACGACATTGGG+TGG | - | chr4_2:16963221-16963240 | Msa0591970:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 16961748 | 16963338 | 16961748 | ID=Msa0591970;Name=Msa0591970 |
| chr4_2 | mRNA | 16961748 | 16963338 | 16961748 | ID=Msa0591970-mRNA-1;Parent=Msa0591970;Name=Msa0591970-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|5|0|313 |
| chr4_2 | exon | 16963221 | 16963338 | 16963221 | ID=Msa0591970-mRNA-1:exon:4910;Parent=Msa0591970-mRNA-1 |
| chr4_2 | exon | 16962967 | 16963116 | 16962967 | ID=Msa0591970-mRNA-1:exon:4909;Parent=Msa0591970-mRNA-1 |
| chr4_2 | exon | 16962542 | 16962853 | 16962542 | ID=Msa0591970-mRNA-1:exon:4908;Parent=Msa0591970-mRNA-1 |
| chr4_2 | exon | 16962375 | 16962451 | 16962375 | ID=Msa0591970-mRNA-1:exon:4907;Parent=Msa0591970-mRNA-1 |
| chr4_2 | exon | 16961748 | 16962032 | 16961748 | ID=Msa0591970-mRNA-1:exon:4906;Parent=Msa0591970-mRNA-1 |
| chr4_2 | CDS | 16963221 | 16963338 | 16963221 | ID=Msa0591970-mRNA-1:cds;Parent=Msa0591970-mRNA-1 |
| chr4_2 | CDS | 16962967 | 16963116 | 16962967 | ID=Msa0591970-mRNA-1:cds;Parent=Msa0591970-mRNA-1 |
| chr4_2 | CDS | 16962542 | 16962853 | 16962542 | ID=Msa0591970-mRNA-1:cds;Parent=Msa0591970-mRNA-1 |
| chr4_2 | CDS | 16962375 | 16962451 | 16962375 | ID=Msa0591970-mRNA-1:cds;Parent=Msa0591970-mRNA-1 |
| chr4_2 | CDS | 16961748 | 16962032 | 16961748 | ID=Msa0591970-mRNA-1:cds;Parent=Msa0591970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
