AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0591990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0591990 MtrunA17_Chr4g0009851 76.282 312 49 3 259 547 3 312 1.47e-168 479
Msa0591990 MtrunA17_Chr4g0009851 64.504 262 70 2 1 239 1 262 3.16e-106 321
Msa0591990 MtrunA17_Chr4g0009981 77.778 261 34 2 309 547 1 259 1.12e-141 409
Msa0591990 MtrunA17_Chr4g0009981 64.593 209 52 1 53 239 1 209 1.49e-79 250
Msa0591990 MtrunA17_Chr4g0009901 75.954 262 41 1 1 240 1 262 6.07e-136 395
Msa0591990 MtrunA17_Chr4g0009901 70.711 239 46 2 260 476 4 240 6.39e-107 321
Msa0591990 MtrunA17_Chr4g0011071 77.119 118 25 1 311 428 35 150 2.53e-56 186
Msa0591990 MtrunA17_Chr4g0011071 73.451 113 30 0 58 170 38 150 8.50e-54 180
Msa0591990 MtrunA17_Chr4g0010001 89.535 86 9 0 260 345 4 89 5.26e-51 169
Msa0591990 MtrunA17_Chr4g0010001 83.146 89 15 0 1 89 1 89 1.69e-48 162
Msa0591990 MtrunA17_Chr6g0471041 41.237 291 134 9 266 530 14 293 2.60e-50 178
Msa0591990 MtrunA17_Chr6g0471041 40.336 238 113 6 10 225 14 244 8.08e-41 152
Msa0591990 MtrunA17_Chr5g0423031 85.393 89 13 0 1 89 1 89 2.58e-48 166
Msa0591990 MtrunA17_Chr5g0423031 86.207 87 12 0 259 345 3 89 1.42e-46 161
Msa0591990 MtrunA17_Chr5g0423031 52.326 86 41 0 159 244 79 164 9.01e-15 72.8
Msa0591990 MtrunA17_Chr1g0161431 39.113 248 96 5 266 460 11 256 1.04e-47 175
Msa0591990 MtrunA17_Chr1g0161431 39.676 247 96 5 10 203 11 257 8.42e-47 173
Msa0591990 MtrunA17_Chr4g0009991 70.940 117 11 2 101 195 1 116 1.99e-45 155
Msa0591990 MtrunA17_Chr4g0009991 63.025 119 19 3 357 453 1 116 3.02e-36 131
Msa0591990 MtrunA17_Chr8g0383961 41.860 258 120 8 257 499 5 247 3.17e-44 157
Msa0591990 MtrunA17_Chr8g0383961 42.922 219 102 6 1 207 1 208 2.05e-41 150
Msa0591990 MtrunA17_Chr8g0391911 35.950 242 105 4 260 453 3 242 2.14e-40 147
Msa0591990 MtrunA17_Chr8g0391911 35.628 247 111 3 10 208 9 255 1.40e-39 144
Msa0591990 MtrunA17_Chr8g0376881 36.187 257 112 6 265 473 24 276 5.74e-40 152
Msa0591990 MtrunA17_Chr8g0376881 34.156 243 112 4 9 203 24 266 1.69e-35 139
Msa0591990 MtrunA17_Chr3g0123131 36.475 244 103 5 266 459 13 254 6.61e-40 152
Msa0591990 MtrunA17_Chr3g0123131 34.836 244 109 4 10 203 13 256 7.80e-37 144
Msa0591990 MtrunA17_Chr4g0067981 36.214 243 105 4 266 460 31 271 2.22e-39 152
Msa0591990 MtrunA17_Chr4g0067981 35.656 244 105 3 10 203 31 272 2.23e-38 149
Msa0591990 MtrunA17_Chr6g0456631 43.750 160 86 2 260 417 3 160 7.20e-39 140
Msa0591990 MtrunA17_Chr6g0456631 44.079 152 83 1 10 159 9 160 8.86e-38 137
Msa0591990 MtrunA17_Chr2g0294911 34.586 266 124 5 266 483 29 292 1.97e-38 149
Msa0591990 MtrunA17_Chr2g0294911 34.109 258 121 3 10 221 29 283 3.51e-38 148
Msa0591990 MtrunA17_Chr1g0149841 35.271 258 117 6 263 470 2 259 8.06e-36 140
Msa0591990 MtrunA17_Chr1g0149841 32.794 247 116 4 7 203 2 248 2.00e-29 121
Msa0591990 MtrunA17_Chr7g0275401 33.594 256 115 5 263 466 2 254 1.20e-33 129
Msa0591990 MtrunA17_Chr7g0275401 31.200 250 121 5 7 205 2 251 1.51e-27 112
Msa0591990 MtrunA17_Chr3g0137101 32.389 247 115 4 266 460 8 254 2.15e-31 129
Msa0591990 MtrunA17_Chr3g0137101 33.468 248 111 5 10 203 8 255 6.09e-29 121
Msa0591990 MtrunA17_Chr2g0304841 29.804 255 122 4 266 463 18 272 3.05e-29 122
Msa0591990 MtrunA17_Chr2g0304841 29.134 254 121 5 10 204 18 271 1.08e-25 111
Msa0591990 MtrunA17_Chr4g0074411 30.522 249 126 5 265 467 17 264 1.66e-28 119
Msa0591990 MtrunA17_Chr4g0074411 31.048 248 124 5 9 209 17 264 4.76e-28 118
Msa0591990 MtrunA17_Chr3g0134481 35.323 201 108 6 258 455 2 183 3.23e-28 111
Msa0591990 MtrunA17_Chr3g0134481 34.392 189 110 4 10 197 8 183 4.23e-25 102
Msa0591990 MtrunA17_Chr4g0074401 29.084 251 128 5 266 467 17 266 7.15e-28 117
Msa0591990 MtrunA17_Chr4g0074401 30.800 250 123 5 10 209 17 266 1.66e-27 116
Msa0591990 MtrunA17_Chr7g0275891 41.270 126 72 1 263 386 2 127 9.28e-28 114
Msa0591990 MtrunA17_Chr7g0275891 29.008 262 117 5 7 202 2 260 8.96e-27 111
Msa0591990 MtrunA17_Chr1g0149851 43.200 125 70 1 263 386 2 126 3.23e-27 115
Msa0591990 MtrunA17_Chr1g0149851 40.152 132 78 1 7 137 2 133 1.04e-24 107
Msa0591990 MtrunA17_Chr3g0134461 33.679 193 115 4 266 453 8 192 5.70e-24 99.8
Msa0591990 MtrunA17_Chr3g0134461 30.732 205 103 5 10 195 8 192 1.30e-19 87.0
Msa0591990 MtrunA17_Chr1g0149831 32.124 193 85 4 324 470 1 193 1.12e-20 91.3
Msa0591990 MtrunA17_Chr1g0149831 30.220 182 81 3 68 203 1 182 4.96e-16 77.8
Msa0591990 MtrunA17_Chr4g0074421 30.220 182 83 4 315 453 2 182 9.11e-20 87.8
Msa0591990 MtrunA17_Chr4g0074421 30.939 181 81 4 59 195 2 182 5.63e-18 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0591990 AT2G01760.1 35.115 262 107 7 263 465 4 261 4.56e-41 152
Msa0591990 AT2G01760.1 42.667 150 82 3 7 154 4 151 6.43e-32 127
Msa0591990 AT1G67710.1 34.457 267 117 6 267 477 8 272 5.51e-39 149
Msa0591990 AT1G67710.1 34.836 244 108 4 11 203 8 251 4.74e-34 135
Msa0591990 AT2G01760.2 31.724 290 107 8 263 465 4 289 1.41e-35 138
Msa0591990 AT2G01760.2 35.955 178 82 4 7 154 4 179 1.98e-26 112
Msa0591990 AT4G31920.1 32.129 249 134 4 266 482 13 258 7.66e-34 135
Msa0591990 AT4G31920.1 33.476 233 121 5 10 208 13 245 7.99e-30 124
Msa0591990 AT2G25180.1 33.745 243 109 4 266 460 13 251 6.05e-32 130
Msa0591990 AT2G25180.1 32.787 244 110 4 10 203 13 252 3.35e-28 119
Msa0591990 AT3G16857.1 43.548 124 69 1 266 388 33 156 4.64e-28 119
Msa0591990 AT3G16857.1 42.336 137 78 1 10 145 33 169 8.99e-28 118
Msa0591990 AT3G16857.2 43.548 124 69 1 266 388 33 156 4.69e-28 119
Msa0591990 AT3G16857.2 42.336 137 78 1 10 145 33 169 9.77e-28 118
Msa0591990 AT5G58080.1 32.530 249 122 6 266 470 14 260 5.10e-25 109
Msa0591990 AT5G58080.1 31.538 260 122 9 10 221 14 265 1.52e-21 99.0
Msa0591990 AT1G67710.2 32.057 209 85 5 324 477 1 207 1.01e-22 101
Msa0591990 AT1G67710.2 32.258 186 76 4 68 203 1 186 2.04e-18 88.6
Msa0591990 AT2G01760.3 31.500 200 75 6 324 465 1 196 4.09e-22 97.8
Msa0591990 AT2G01760.3 39.773 88 50 2 68 154 1 86 7.65e-14 73.2
Msa0591990 AT5G49240.1 27.160 243 128 7 258 453 32 272 3.89e-20 91.3
Msa0591990 AT5G49240.1 30.894 123 84 1 9 130 37 159 6.62e-16 79.0
Msa0591990 AT1G49190.1 23.939 330 188 8 266 539 30 352 8.63e-19 89.4
Msa0591990 AT1G49190.1 25.468 267 140 8 10 221 30 292 2.17e-18 87.8
Msa0591990 AT3G62670.1 27.477 222 116 6 28 204 53 274 1.78e-18 88.6
Msa0591990 AT3G62670.1 25.926 216 117 5 284 456 53 268 1.63e-17 85.5
Msa0591990 AT1G49190.2 33.871 124 81 1 266 388 30 153 2.77e-18 89.0
Msa0591990 AT1G49190.2 33.871 124 77 2 10 130 30 151 4.30e-17 85.1
Msa0591990 AT3G16857.3 42.353 85 48 1 305 388 2 86 4.40e-17 85.1
Msa0591990 AT3G16857.3 40.816 98 57 1 49 145 2 99 6.53e-17 84.3
Msa0591990 AT1G68210.1 29.231 130 90 2 14 142 13 141 2.20e-11 67.0

Find 100 sgRNAs with CRISPR-Local

Find 463 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATGATTCTCAAAATTA+TGG 0.243357 4_2:-17037148 Msa0591990:CDS
TGCTAAAACTAACCTGTAAA+TGG 0.277475 4_2:+17030278 None:intergenic
ACATGTTGCCAGCCATTTAC+AGG 0.283862 4_2:-17030290 Msa0591990:intron
ACATGTTGCTAGTCATTTAC+AGG 0.286115 4_2:-17037103 Msa0591990:intron
GACATTGTGTGGTCGAATTC+AGG 0.320772 4_2:+17029766 None:intergenic
CTTGAATTTGTTGGAAAGAA+AGG 0.326280 4_2:-17030988 Msa0591990:CDS
CTCAAAATTATGGATGTTCC+AGG 0.335551 4_2:-17037138 Msa0591990:CDS
AATTATGGATGTTCCAGGTT+TGG 0.345656 4_2:-17037133 Msa0591990:CDS
ATTATGGATGTTCCAGGTTT+GGG 0.349053 4_2:-17037132 Msa0591990:CDS
CTTGAATTTGTTGGAAAGAA+TGG 0.358508 4_2:-17037763 Msa0591990:CDS
TTCTGATGCCTTGAATTTGT+TGG 0.373586 4_2:-17030997 Msa0591990:CDS
TTCTGATGCCTTGAATTTGT+TGG 0.373586 4_2:-17037772 Msa0591990:CDS
TGAGTTGTAGGGTAACATTT+TGG 0.376494 4_2:+17030904 None:intergenic
AAAGTGACTAACCTTGATAA+TGG 0.378712 4_2:+17037930 None:intergenic
GATAAATCATCATCAACATA+TGG 0.380393 4_2:+17029654 None:intergenic
AATGTGGGGCTTGCGAATAT+TGG 0.385194 4_2:-17030704 Msa0591990:CDS
TACATATTGGACTAAGCCTT+TGG 0.386876 4_2:-17037495 Msa0591990:CDS
CGAATATTGGACTAAGCCTT+TGG 0.392176 4_2:-17030691 Msa0591990:CDS
CTTTCTTTCCAACAAATTCA+AGG 0.396613 4_2:+17030989 None:intergenic
ATCAGAAGCTGTATTGCATT+TGG 0.403201 4_2:+17031013 None:intergenic
TGACAGGAATGTTGAGTTGT+AGG 0.408636 4_2:+17030892 None:intergenic
ATCAGAAGCTGTGTTACATT+TGG 0.412873 4_2:+17037788 None:intergenic
AATGTGGGGCTTGTACATAT+TGG 0.414028 4_2:-17037508 Msa0591990:CDS
AATAAAGAATATGAAATTGT+TGG 0.416766 4_2:-17030606 Msa0591990:CDS
AATAAAGAATATGAAATTGT+TGG 0.416766 4_2:-17037416 Msa0591990:CDS
CAGTTTGAAAGTTATCGTTC+TGG 0.417272 4_2:+17036820 None:intergenic
GGTTCAAGAAAATAGAAAAC+GGG 0.418887 4_2:-17037384 Msa0591990:CDS
CATTCTTTCCAACAAATTCA+AGG 0.419108 4_2:+17037764 None:intergenic
AATGTCGTTTGCAGAAATAT+AGG 0.426550 4_2:-17036974 Msa0591990:intron
ACGCTAAATTGTGTTTCAAA+AGG 0.431875 4_2:+17029831 None:intergenic
AAAAGAAACACTTGCAAAGA+AGG 0.435703 4_2:-17030529 Msa0591990:CDS
TGTAATCGATTCCATTATCA+AGG 0.450836 4_2:-17037941 Msa0591990:intron
TTGAGACCGGCTGGGAATGA+TGG 0.453544 4_2:+17031245 None:intergenic
TCAAACTGAGCTGACTGATC+AGG 0.459166 4_2:-17036805 Msa0591990:CDS
AATAAATTCTTACTAATGAC+AGG 0.461511 4_2:+17030876 None:intergenic
AATAAATTCTTACTAATGAC+AGG 0.461511 4_2:+17037651 None:intergenic
ATATGAAATTGTTGGAAGCT+TGG 0.461542 4_2:-17037408 Msa0591990:CDS
TGTAATCGATATCATTATCA+AGG 0.463829 4_2:-17031170 Msa0591990:intron
AAGTCATAAACATCCATGTT+TGG 0.465091 4_2:+17030930 None:intergenic
TTGAGACCAGCAGGGAATGA+TGG 0.467536 4_2:+17038016 None:intergenic
TCAACATATGGGAACAAGTT+GGG 0.468173 4_2:+17029666 None:intergenic
AAGTCATAAGCATCCATGTT+TGG 0.471983 4_2:+17037705 None:intergenic
TACTCACTCAATGCCGGAGC+AGG 0.473606 4_2:-17029802 Msa0591990:CDS
GCAATAACCTTGAGACCGGC+TGG 0.475576 4_2:+17031236 None:intergenic
AAAAGAAACACATGCAAAGA+AGG 0.478150 4_2:-17037339 Msa0591990:CDS
CACTTTCCTCAACTCTATTG+AGG 0.492388 4_2:-17037969 Msa0591990:CDS
CAGCTAGAAAACCATCATTC+CGG 0.492887 4_2:+17036781 None:intergenic
GCAATAACCTTGAGACCAGC+AGG 0.494358 4_2:+17038007 None:intergenic
GATGTTCCAGGTTTGGGTGT+AGG 0.505057 4_2:-17037126 Msa0591990:CDS
TAGGATTCATTTGAAGAGAT+CGG 0.515087 4_2:-17036955 Msa0591990:CDS
ATATGAAATTGTTGGAAGCT+CGG 0.515274 4_2:-17030598 Msa0591990:CDS
TGGTTCAAGAAAATAGAAAA+CGG 0.517102 4_2:-17037385 Msa0591990:CDS
GACAGGAATGTTGAGTTGTA+GGG 0.519779 4_2:+17030893 None:intergenic
ATCATTCCCTGCTGGTCTCA+AGG 0.520371 4_2:-17038014 Msa0591990:CDS
ACTGATCAGGACCGGAATGA+TGG 0.523712 4_2:-17036792 Msa0591990:intron
TTATGAAGTCTATTCAATGT+GGG 0.525603 4_2:-17037523 Msa0591990:CDS
ATCATGAAGTCTATTGAATG+TGG 0.526495 4_2:-17030720 Msa0591990:CDS
TCAAACTCAATCGATCGATC+AGG 0.527821 4_2:-17036844 Msa0591990:CDS
ACATGTCCTACACCCAAACC+TGG 0.534820 4_2:+17037120 None:intergenic
AAAACTAACCTGTAAATGGC+TGG 0.535893 4_2:+17030282 None:intergenic
TTGACGTCTTCTTCAACCAA+AGG 0.537631 4_2:+17037479 None:intergenic
GACAACCCATCATTCCCTGC+TGG 0.539365 4_2:-17038022 Msa0591990:CDS
TGAGACCAGCAGGGAATGAT+GGG 0.539790 4_2:+17038017 None:intergenic
CGACACACGACAACAATGGA+TGG 0.540785 4_2:-17029733 Msa0591990:CDS
TGGCAACATGTTGTCAGAAA+CGG 0.543020 4_2:-17037449 Msa0591990:CDS
CACTGTCCTCAACTCTATTG+AGG 0.546156 4_2:-17031198 Msa0591990:CDS
ATAAATCATCATCAACATAT+GGG 0.548211 4_2:+17029655 None:intergenic
AGAAAACTCTGGTCCTGCTC+CGG 0.548712 4_2:+17029789 None:intergenic
TCATGAAGTCTATTGAATGT+GGG 0.549366 4_2:-17030719 Msa0591990:CDS
ATCATTCCCAGCCGGTCTCA+AGG 0.552068 4_2:-17031243 Msa0591990:CDS
ATTATGAAGTCTATTCAATG+TGG 0.558796 4_2:-17037524 Msa0591990:CDS
ATTGACAAGGTTCATAGTGA+TGG 0.561362 4_2:-17036870 Msa0591990:CDS
ATCAACATATGGGAACAAGT+TGG 0.563419 4_2:+17029665 None:intergenic
CTGAGCTGACTGATCAGGAC+CGG 0.566450 4_2:-17036800 Msa0591990:CDS
AGAAGCTACTCACTCAATGC+CGG 0.575449 4_2:-17029808 Msa0591990:CDS
TGAGACCGGCTGGGAATGAT+GGG 0.577892 4_2:+17031246 None:intergenic
AATTGCAATAACCTTGAGAC+CGG 0.581075 4_2:+17031232 None:intergenic
GAAAGTGATGTCATGATCAA+TGG 0.586165 4_2:+17037985 None:intergenic
TGAAATTGTTGGAAGCTTGG+TGG 0.586185 4_2:-17037405 Msa0591990:CDS
CTTCATGATAGAACTTGCTG+TGG 0.588533 4_2:+17030734 None:intergenic
TCAAGACGAGTGCATTGACA+AGG 0.590781 4_2:-17036883 Msa0591990:CDS
TGATGCTCATATGCCAAACA+TGG 0.604750 4_2:-17030943 Msa0591990:CDS
TGATGCTCATATGCCAAACA+TGG 0.604750 4_2:-17037718 Msa0591990:CDS
CATGAAGTCTATTGAATGTG+GGG 0.606058 4_2:-17030718 Msa0591990:CDS
ATTGCGACACACGACAACAA+TGG 0.611832 4_2:-17029737 Msa0591990:CDS
CAATAACCTTGAGACCGGCT+GGG 0.613963 4_2:+17031237 None:intergenic
TATGAAGTCTATTCAATGTG+GGG 0.614025 4_2:-17037522 Msa0591990:CDS
GACAACCCATCATTCCCAGC+CGG 0.620153 4_2:-17031251 Msa0591990:CDS
ACATCTCCTCAATAGAGTTG+AGG 0.625514 4_2:+17037963 None:intergenic
TCGAATTCAGGAGAAAACTC+TGG 0.627173 4_2:+17029778 None:intergenic
TCTTACTACATGTTGCCACA+TGG 0.630006 4_2:+17030650 None:intergenic
ACATCTCCTCAATAGAGTTG+AGG 0.637933 4_2:+17031192 None:intergenic
AAGAAGACGTCAAGAGCATG+TGG 0.649026 4_2:-17037469 Msa0591990:CDS
GCAATTGTCATGACATTGTG+TGG 0.655655 4_2:+17029755 None:intergenic
TGAAATTGTTGGAAGCTCGG+TGG 0.670504 4_2:-17030595 Msa0591990:CDS
CGGCTGATGAAACAAAACGT+GGG 0.694912 4_2:-17036935 Msa0591990:CDS
ATGATTTATCATCACTTGTG+TGG 0.696325 4_2:-17029641 Msa0591990:CDS
CAATAACCTTGAGACCAGCA+GGG 0.699486 4_2:+17038008 None:intergenic
TCGGCTGATGAAACAAAACG+TGG 0.707531 4_2:-17036936 Msa0591990:CDS
GTTCAAGAAAATAGAAAACG+GGG 0.742093 4_2:-17037383 Msa0591990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTAAAATATTATTACC+AGG - chr4_2:17032824-17032843 Msa0591990:intron 10.0%
!!! AGTTTTCAAAAAAAAAATAT+CGG + chr4_2:17035381-17035400 None:intergenic 10.0%
!!! ATATTTTTTTTTTGAAAACT+CGG - chr4_2:17035381-17035400 Msa0591990:intron 10.0%
!! AATAAAGAATATGAAATTGT+TGG - chr4_2:17030259-17030278 Msa0591990:intron 15.0%
!!! ATAATTTTGAGAATCATTTT+GGG + chr4_2:17030528-17030547 None:intergenic 15.0%
!! TTAAATTTAAACTGCATATT+AGG + chr4_2:17030965-17030984 None:intergenic 15.0%
!!! AAATAAAAACTAGCAATTTT+TGG + chr4_2:17030989-17031008 None:intergenic 15.0%
!! TTAAAAGATATTATTCATTC+AGG + chr4_2:17032747-17032766 None:intergenic 15.0%
!! ACACAATAATTTATGATTAA+TGG - chr4_2:17033201-17033220 Msa0591990:intron 15.0%
!! TTTCATAATTAATTCTAACT+TGG - chr4_2:17033372-17033391 Msa0591990:intron 15.0%
!! TTCATAATTAATTCTAACTT+GGG - chr4_2:17033373-17033392 Msa0591990:intron 15.0%
!!! ATTATTAGTAGCTATTTTAT+TGG - chr4_2:17035749-17035768 Msa0591990:intron 15.0%
!! AGTAAACAGATATATTTATA+GGG + chr4_2:17036068-17036087 None:intergenic 15.0%
!! AAGTAAACAGATATATTTAT+AGG + chr4_2:17036069-17036088 None:intergenic 15.0%
!! AATAAAGAATATGAAATTGT+TGG - chr4_2:17030259-17030278 Msa0591990:intron 15.0%
!! CATATAGTAAAAAAGTAATT+AGG + chr4_2:17037253-17037272 None:intergenic 15.0%
!!! TGATTTTAAACTGAAATTTA+TGG - chr4_2:17037707-17037726 Msa0591990:CDS 15.0%
!! AATAAATTCTTACTAATGAC+AGG + chr4_2:17030027-17030046 None:intergenic 20.0%
!!! TTATTTCTTTTTTGTAGTGA+TGG - chr4_2:17030105-17030124 Msa0591990:intron 20.0%
!!! CATAATTTTGAGAATCATTT+TGG + chr4_2:17030529-17030548 None:intergenic 20.0%
!! CAAAATGATTCTCAAAATTA+TGG - chr4_2:17030527-17030546 Msa0591990:CDS 20.0%
!! TAGAAATGCCAAAATAAAAA+AGG + chr4_2:17031092-17031111 None:intergenic 20.0%
!! CTTTATATTGTATTCCTTTA+AGG - chr4_2:17031145-17031164 Msa0591990:intron 20.0%
!!! TATTATAACTTTAGAAACTC+AGG - chr4_2:17031316-17031335 Msa0591990:intron 20.0%
!! TGAGAAATATATTTACTATC+AGG - chr4_2:17031555-17031574 Msa0591990:intron 20.0%
!! CCATTAAATATTATCTTACT+CGG + chr4_2:17031912-17031931 None:intergenic 20.0%
!! ACACAATAATTTATGGTTAA+TGG - chr4_2:17032136-17032155 Msa0591990:intron 20.0%
!!! TTTGTTTTAGCTTTTAGTTT+TGG + chr4_2:17032310-17032329 None:intergenic 20.0%
!!! TCTCATTTTGATCATTTAAT+CGG - chr4_2:17032368-17032387 Msa0591990:intron 20.0%
!! ATAGAATTTAGTTATTTGTG+AGG - chr4_2:17032654-17032673 Msa0591990:intron 20.0%
!! TTAAAATATTATTACCAGGT+AGG - chr4_2:17032828-17032847 Msa0591990:intron 20.0%
!! AATTTCTTTAGCTGTTTAAT+AGG - chr4_2:17032983-17033002 Msa0591990:intron 20.0%
!! TTAACAATGACAATATTTAG+TGG + chr4_2:17033403-17033422 None:intergenic 20.0%
!!! TCTCATTTTTCATTTTAATG+TGG - chr4_2:17033474-17033493 Msa0591990:intron 20.0%
!! TTCATTTATATCATAAGAGT+AGG + chr4_2:17034087-17034106 None:intergenic 20.0%
!! CTATATGAAAATCTATTTCA+AGG - chr4_2:17034454-17034473 Msa0591990:intron 20.0%
!! GATGAAAGTAATATATATGT+AGG - chr4_2:17034860-17034879 Msa0591990:intron 20.0%
!!! TTTTTAATCCTTTGTGTTTT+AGG + chr4_2:17035277-17035296 None:intergenic 20.0%
!! TATAACTTATGAATTCATAG+TGG - chr4_2:17035343-17035362 Msa0591990:intron 20.0%
!! GCTAGAACTTAATTTAAATA+TGG + chr4_2:17035468-17035487 None:intergenic 20.0%
!!! AGTAGCTATATTTTTTTTTG+TGG - chr4_2:17035602-17035621 Msa0591990:intron 20.0%
!!! AGCTACTAATAATTTTCTTA+AGG + chr4_2:17035805-17035824 None:intergenic 20.0%
!! CAGATATATTTATAGAGTTA+GGG + chr4_2:17036062-17036081 None:intergenic 20.0%
!! ACAGATATATTTATAGAGTT+AGG + chr4_2:17036063-17036082 None:intergenic 20.0%
!! TGTGAAATTATTAGTAACTA+GGG + chr4_2:17036319-17036338 None:intergenic 20.0%
!!! AGAAACTTTAGAATTGAATA+AGG + chr4_2:17036552-17036571 None:intergenic 20.0%
!! AATAAATTCTTACTAATGAC+AGG + chr4_2:17030027-17030046 None:intergenic 20.0%
!! TGGTTCAAAAAAATAGAAAA+CGG - chr4_2:17037100-17037119 Msa0591990:intron 20.0%
!!! ATGTTTTTCTCTTAATTTTC+AGG - chr4_2:17037308-17037327 Msa0591990:intron 20.0%
!!! TGTTTTTCTCTTAATTTTCA+GGG - chr4_2:17037309-17037328 Msa0591990:intron 20.0%
!!! ATGATTTTCAGAATCTTTTT+TGG + chr4_2:17037341-17037360 None:intergenic 20.0%
!!! AAAAAAGATTCTGAAAATCA+TGG - chr4_2:17037340-17037359 Msa0591990:CDS 20.0%
!!! AACATGTTCTTTTTTCATAT+CGG + chr4_2:17037372-17037391 None:intergenic 20.0%
!! AAAAATGTTGTTAGTAATGT+CGG + chr4_2:17037980-17037999 None:intergenic 20.0%
!! ATAAATCATCATCAACATAT+GGG + chr4_2:17038023-17038042 None:intergenic 20.0%
! ATTATGAAGTCTATTCAATG+TGG - chr4_2:17030151-17030170 Msa0591990:intron 25.0%
! TTATGAAGTCTATTCAATGT+GGG - chr4_2:17030152-17030171 Msa0591990:intron 25.0%
! TGGTTCAAGAAAATAGAAAA+CGG - chr4_2:17030290-17030309 Msa0591990:intron 25.0%
! ACAAAGCAAAGAAAAGAATT+AGG + chr4_2:17030443-17030462 None:intergenic 25.0%
! ATTCTTACCAAAACTGTTAT+GGG - chr4_2:17031227-17031246 Msa0591990:CDS 25.0%
! TACCATATTAGCACTAAAAA+TGG - chr4_2:17031491-17031510 Msa0591990:intron 25.0%
!!! ACAAATCGTTTGAAACTTTT+TGG + chr4_2:17031590-17031609 None:intergenic 25.0%
! ACATAAACTAAACCAATTCT+AGG + chr4_2:17031739-17031758 None:intergenic 25.0%
! TAGTCATCTATAATGTTCTT+TGG - chr4_2:17031783-17031802 Msa0591990:intron 25.0%
! AGAATTTACTTTCTTAAGCT+GGG - chr4_2:17031834-17031853 Msa0591990:intron 25.0%
! CCGAGTAAGATAATATTTAA+TGG - chr4_2:17031909-17031928 Msa0591990:intron 25.0%
! TAGTGCTACACAATAATTTA+TGG - chr4_2:17032129-17032148 Msa0591990:intron 25.0%
! AAGCTAAAACAAAAGTTTCA+TGG - chr4_2:17032317-17032336 Msa0591990:intron 25.0%
!!! AGAATTGAGATTTTGATCAA+AGG - chr4_2:17032434-17032453 Msa0591990:intron 25.0%
!!! GAATTGAGATTTTGATCAAA+GGG - chr4_2:17032435-17032454 Msa0591990:intron 25.0%
! TTAAAGTTTATGCATCTTTC+TGG + chr4_2:17033541-17033560 None:intergenic 25.0%
! AAGAAAGAAGAAAATGAAAG+AGG + chr4_2:17033770-17033789 None:intergenic 25.0%
! AATCTGTTTATGATCAATTG+TGG - chr4_2:17034140-17034159 Msa0591990:intron 25.0%
! ATACAATTAACTACTTAGCA+AGG - chr4_2:17034203-17034222 Msa0591990:intron 25.0%
! AAATATCTCAAAGTTTACCT+AGG + chr4_2:17034771-17034790 None:intergenic 25.0%
! GATTATAGTAAACCATATGA+TGG + chr4_2:17034941-17034960 None:intergenic 25.0%
! TCTCATTATGTCAAAGAAAA+GGG + chr4_2:17035048-17035067 None:intergenic 25.0%
! ATCTCATTATGTCAAAGAAA+AGG + chr4_2:17035049-17035068 None:intergenic 25.0%
!! TCTTTGAAAATCAAGGATTT+AGG + chr4_2:17035121-17035140 None:intergenic 25.0%
!!! AGCTATATTTTTTTTTGTGG+TGG - chr4_2:17035605-17035624 Msa0591990:intron 25.0%
! GACAATGCATAAAATATGTA+AGG + chr4_2:17035650-17035669 None:intergenic 25.0%
! AGAAAAACAAAACTAGACTA+CGG - chr4_2:17035779-17035798 Msa0591990:intron 25.0%
! CAGATATATTTATAGGGTTA+GGG + chr4_2:17036148-17036167 None:intergenic 25.0%
! ACAGATATATTTATAGGGTT+AGG + chr4_2:17036149-17036168 None:intergenic 25.0%
!! AGTAAAGGCATATACTTATA+GGG + chr4_2:17036244-17036263 None:intergenic 25.0%
!! AAGTAAAGGCATATACTTAT+AGG + chr4_2:17036245-17036264 None:intergenic 25.0%
! GTGTGAAATTATTAGTAACT+AGG + chr4_2:17036320-17036339 None:intergenic 25.0%
! GAGAAAAAATAGAATTGAGA+GGG + chr4_2:17036352-17036371 None:intergenic 25.0%
! AGAGAAAAAATAGAATTGAG+AGG + chr4_2:17036353-17036372 None:intergenic 25.0%
! TGTAATCGATATCATTATCA+AGG - chr4_2:17036505-17036524 Msa0591990:intron 25.0%
!!! TTATTTCTCTTTTGTAGTGA+TGG - chr4_2:17036909-17036928 Msa0591990:CDS 25.0%
! GGTTCAAAAAAATAGAAAAC+GGG - chr4_2:17037101-17037120 Msa0591990:intron 25.0%
! GTTCAAAAAAATAGAAAACG+GGG - chr4_2:17037102-17037121 Msa0591990:intron 25.0%
!! GTTTTTCTCTTAATTTTCAG+GGG - chr4_2:17037310-17037329 Msa0591990:intron 25.0%
!!! ACATGTTCTTTTTTCATATC+GGG + chr4_2:17037371-17037390 None:intergenic 25.0%
! AAAATTACAACAACAGAGTT+AGG + chr4_2:17037501-17037520 None:intergenic 25.0%
! TTTAATAACATGCAAGACTA+AGG + chr4_2:17037547-17037566 None:intergenic 25.0%
! AGTAGTATATTATCAACAAG+AGG + chr4_2:17037671-17037690 None:intergenic 25.0%
! GTAGAATGAAAAAATCAAAG+AGG - chr4_2:17037818-17037837 Msa0591990:intron 25.0%
! GATAAATCATCATCAACATA+TGG + chr4_2:17038024-17038043 None:intergenic 25.0%
! TGTAATCGATTCCATTATCA+AGG - chr4_2:17029734-17029753 Msa0591990:CDS 30.0%
AAAGTGACTAACCTTGATAA+TGG + chr4_2:17029748-17029767 None:intergenic 30.0%
CATTCTTTCCAACAAATTCA+AGG + chr4_2:17029914-17029933 None:intergenic 30.0%
!! CTTGAATTTGTTGGAAAGAA+TGG - chr4_2:17029912-17029931 Msa0591990:intron 30.0%
!!! TGAGTTTTAGGGTAACATTT+TGG + chr4_2:17029999-17030018 None:intergenic 30.0%
TATGAAGTCTATTCAATGTG+GGG - chr4_2:17030153-17030172 Msa0591990:intron 30.0%
ATATGAAATTGTTGGAAGCT+TGG - chr4_2:17030267-17030286 Msa0591990:intron 30.0%
GGTTCAAGAAAATAGAAAAC+GGG - chr4_2:17030291-17030310 Msa0591990:CDS 30.0%
GTTCAAGAAAATAGAAAACG+GGG - chr4_2:17030292-17030311 Msa0591990:CDS 30.0%
AAAAGAAACACATGCAAAGA+AGG - chr4_2:17030336-17030355 Msa0591990:CDS 30.0%
AATTGCATCAACGATTTCTA+TGG - chr4_2:17030380-17030399 Msa0591990:intron 30.0%
ATTGCATCAACGATTTCTAT+GGG - chr4_2:17030381-17030400 Msa0591990:intron 30.0%
AGGAAACAATCATACTATCA+AGG + chr4_2:17030423-17030442 None:intergenic 30.0%
!! GTCATTTACAGGTTTGTTTT+CGG - chr4_2:17030583-17030602 Msa0591990:CDS 30.0%
! AATGTCGTTTGCAGAAATAT+AGG - chr4_2:17030701-17030720 Msa0591990:CDS 30.0%
TAGGATTCATTTGAAGAGAT+CGG - chr4_2:17030720-17030739 Msa0591990:CDS 30.0%
ATACCAACAGTAGTACATTA+AGG + chr4_2:17031037-17031056 None:intergenic 30.0%
ATGAATTGTACCTAAAGCTT+AGG + chr4_2:17031064-17031083 None:intergenic 30.0%
!!! CATCTGTGCCTTTTTTATTT+TGG - chr4_2:17031081-17031100 Msa0591990:intron 30.0%
! GAAGAGTGAATCTATTTTAC+TGG - chr4_2:17031183-17031202 Msa0591990:CDS 30.0%
GATTCTTACCAAAACTGTTA+TGG - chr4_2:17031226-17031245 Msa0591990:CDS 30.0%
!!! TTCCTTTTTTAACATGTCCT+TGG - chr4_2:17031257-17031276 Msa0591990:CDS 30.0%
AACCAAGGACATGTTAAAAA+AGG + chr4_2:17031262-17031281 None:intergenic 30.0%
TACTTAATTCACTGAAACCA+AGG + chr4_2:17031277-17031296 None:intergenic 30.0%
AAAATTGAATGGACAAAGCA+AGG + chr4_2:17031374-17031393 None:intergenic 30.0%
! TTGCTTTGTCCATTCAATTT+TGG - chr4_2:17031373-17031392 Msa0591990:intron 30.0%
!! TTGTCCATTCAATTTTGGTA+TGG - chr4_2:17031378-17031397 Msa0591990:intron 30.0%
CAAACCATACCAAAATTGAA+TGG + chr4_2:17031385-17031404 None:intergenic 30.0%
!! CATTCAATTTTGGTATGGTT+TGG - chr4_2:17031383-17031402 Msa0591990:intron 30.0%
TTCTCATATGAAAGTCACTA+TGG + chr4_2:17031541-17031560 None:intergenic 30.0%
!! ATCGTTTGAAACTTTTTGGT+AGG + chr4_2:17031586-17031605 None:intergenic 30.0%
AAGAGAAGTCCATAAAATCT+AGG - chr4_2:17031688-17031707 Msa0591990:intron 30.0%
AGAGAAGTCCATAAAATCTA+GGG - chr4_2:17031689-17031708 Msa0591990:intron 30.0%
! AATTGGTTTAGTTTATGTCG+AGG - chr4_2:17031741-17031760 Msa0591990:intron 30.0%
GAGAATTTACTTTCTTAAGC+TGG - chr4_2:17031833-17031852 Msa0591990:intron 30.0%
! CATTATTACAAAGCCTTGTA+CGG - chr4_2:17032202-17032221 Msa0591990:intron 30.0%
TATCGTTAAGTGACAATGAA+TGG + chr4_2:17032272-17032291 None:intergenic 30.0%
AACAAAAGTTTCATGGTTTG+AGG - chr4_2:17032324-17032343 Msa0591990:intron 30.0%
!! TTGAAGAGTGTTGTATTAGT+AGG - chr4_2:17032411-17032430 Msa0591990:intron 30.0%
GACAATTTAGCCAATTTATG+AGG - chr4_2:17032509-17032528 Msa0591990:intron 30.0%
TTGCAAATCAGAACAAATTC+AGG + chr4_2:17032572-17032591 None:intergenic 30.0%
!! ACACCAATGGATTATTAATG+TGG - chr4_2:17032882-17032901 Msa0591990:intron 30.0%
ATGCCACATTAATAATCCAT+TGG + chr4_2:17032888-17032907 None:intergenic 30.0%
AGCTGTTTAATAGGAAGATA+AGG - chr4_2:17032992-17033011 Msa0591990:intron 30.0%
GTTTAATAGGAAGATAAGGA+AGG - chr4_2:17032996-17033015 Msa0591990:intron 30.0%
TAATGGTTGAGATAGATATG+AGG - chr4_2:17033218-17033237 Msa0591990:intron 30.0%
GATCACATGATAAAATAGCT+AGG - chr4_2:17033590-17033609 Msa0591990:intron 30.0%
ACATGATAAAATAGCTAGGT+TGG - chr4_2:17033594-17033613 Msa0591990:intron 30.0%
! TTTAAGATCACAATTCTGGA+AGG - chr4_2:17033634-17033653 Msa0591990:intron 30.0%
TAGAGATTGTAGAAAAGGTT+TGG - chr4_2:17033669-17033688 Msa0591990:intron 30.0%
AATTGAAACTGAACGAAGAA+AGG + chr4_2:17033804-17033823 None:intergenic 30.0%
! TGATCTCATGTGATTAGTTA+AGG + chr4_2:17034183-17034202 None:intergenic 30.0%
TAGTAGCATGTTAATAGTTG+AGG - chr4_2:17034339-17034358 Msa0591990:intron 30.0%
TAATAGTTGAGGAAGCAAAA+TGG - chr4_2:17034350-17034369 Msa0591990:intron 30.0%
TCGTTATTATGTGCATATGT+AGG - chr4_2:17034807-17034826 Msa0591990:intron 30.0%
CGTTATTATGTGCATATGTA+GGG - chr4_2:17034808-17034827 Msa0591990:intron 30.0%
GCATCATATAGAAGAATAGT+TGG + chr4_2:17034914-17034933 None:intergenic 30.0%
TATGATGCAATACCATCATA+TGG - chr4_2:17034926-17034945 Msa0591990:intron 30.0%
ATCATGATGCAATTTAAACG+AGG - chr4_2:17034958-17034977 Msa0591990:intron 30.0%
TCATGATGCAATTTAAACGA+GGG - chr4_2:17034959-17034978 Msa0591990:intron 30.0%
AATAAGCAACCTCTAATCTA+AGG - chr4_2:17035080-17035099 Msa0591990:intron 30.0%
TAAACAGTTCCTTAGATTAG+AGG + chr4_2:17035092-17035111 None:intergenic 30.0%
! ACACAACTCTTTGAAAATCA+AGG + chr4_2:17035128-17035147 None:intergenic 30.0%
TAAAAACTGTGTAATCCGAA+GGG - chr4_2:17035413-17035432 Msa0591990:intron 30.0%
CGTTTGTTTATCTGTTATCA+AGG + chr4_2:17035526-17035545 None:intergenic 30.0%
TGCATAAAATATGTAAGGTC+CGG + chr4_2:17035645-17035664 None:intergenic 30.0%
!! TTATAGAGTTAGGGTTTTGT+TGG + chr4_2:17036053-17036072 None:intergenic 30.0%
TATCTGTTTACTTCTCTTGA+TGG - chr4_2:17036076-17036095 Msa0591990:intron 30.0%
ATATCTGTTTACTTCTCTTC+TGG - chr4_2:17036161-17036180 Msa0591990:intron 30.0%
!! TCTCTAACTTGTTTCTTTCT+TGG - chr4_2:17036368-17036387 Msa0591990:intron 30.0%
!! CTCTAACTTGTTTCTTTCTT+GGG - chr4_2:17036369-17036388 Msa0591990:intron 30.0%
! GGTTTTACTGCAAATTGTAA+TGG - chr4_2:17036390-17036409 Msa0591990:intron 30.0%
CTTTCTTTCCAACAAATTCA+AGG + chr4_2:17036689-17036708 None:intergenic 30.0%
!! CTTGAATTTGTTGGAAAGAA+AGG - chr4_2:17029912-17029931 Msa0591990:intron 30.0%
AAGTCATAAACATCCATGTT+TGG + chr4_2:17036748-17036767 None:intergenic 30.0%
ATCATGAAGTCTATTGAATG+TGG - chr4_2:17036955-17036974 Msa0591990:CDS 30.0%
TCATGAAGTCTATTGAATGT+GGG - chr4_2:17036956-17036975 Msa0591990:CDS 30.0%
ATATGAAATTGTTGGAAGCT+CGG - chr4_2:17030267-17030286 Msa0591990:intron 30.0%
AAAAGAAACACTTGCAAAGA+AGG - chr4_2:17037146-17037165 Msa0591990:CDS 30.0%
AGGAAAGAATCATACTATCA+AGG + chr4_2:17037233-17037252 None:intergenic 30.0%
TGCTAAAACTAACCTGTAAA+TGG + chr4_2:17037400-17037419 None:intergenic 30.0%
AGAGGATATATAGAAGCTAA+TGG + chr4_2:17037653-17037672 None:intergenic 30.0%
!!! CATTCTACCTTTTTTCTCTT+CGG + chr4_2:17037806-17037825 None:intergenic 30.0%
ACGCTAAATTGTGTTTCAAA+AGG + chr4_2:17037847-17037866 None:intergenic 30.0%
ATGATTTATCATCACTTGTG+TGG - chr4_2:17038034-17038053 Msa0591990:CDS 30.0%
GAAAGTGATGTCATGATCAA+TGG + chr4_2:17029693-17029712 None:intergenic 35.0%
ATCAGAAGCTGTGTTACATT+TGG + chr4_2:17029890-17029909 None:intergenic 35.0%
TTCTGATGCCTTGAATTTGT+TGG - chr4_2:17029903-17029922 Msa0591990:CDS 35.0%
AAGTCATAAGCATCCATGTT+TGG + chr4_2:17029973-17029992 None:intergenic 35.0%
! GACAGGAATGTTGAGTTTTA+GGG + chr4_2:17030010-17030029 None:intergenic 35.0%
! TGACAGGAATGTTGAGTTTT+AGG + chr4_2:17030011-17030030 None:intergenic 35.0%
TACATATTGGACTAAGCCTT+TGG - chr4_2:17030180-17030199 Msa0591990:intron 35.0%
! CTTTGCATGTGTTTCTTTTG+AGG + chr4_2:17030335-17030354 None:intergenic 35.0%
AGAAATCGTTGATGCAATTC+TGG + chr4_2:17030379-17030398 None:intergenic 35.0%
CTCAAAATTATGGATGTTCC+AGG - chr4_2:17030537-17030556 Msa0591990:CDS 35.0%
AATTATGGATGTTCCAGGTT+TGG - chr4_2:17030542-17030561 Msa0591990:CDS 35.0%
ATTATGGATGTTCCAGGTTT+GGG - chr4_2:17030543-17030562 Msa0591990:CDS 35.0%
ACATGTTGCTAGTCATTTAC+AGG - chr4_2:17030572-17030591 Msa0591990:CDS 35.0%
!! TTTACAGGTTTGTTTTCGGA+AGG - chr4_2:17030587-17030606 Msa0591990:CDS 35.0%
GTGGGAAGAAAAAATCAAAG+TGG - chr4_2:17030758-17030777 Msa0591990:intron 35.0%
ATTGACAAGGTTCATAGTGA+TGG - chr4_2:17030805-17030824 Msa0591990:intron 35.0%
CAGTTTGAAAGTTATCGTTC+TGG + chr4_2:17030858-17030877 None:intergenic 35.0%
ATCCTACCTTTACAACCTTA+TGG - chr4_2:17030939-17030958 Msa0591990:CDS 35.0%
ATTAGGCCATAAGGTTGTAA+AGG + chr4_2:17030948-17030967 None:intergenic 35.0%
AAACTGCATATTAGGCCATA+AGG + chr4_2:17030957-17030976 None:intergenic 35.0%
AACAGTAGTACATTAAGGCA+AGG + chr4_2:17031032-17031051 None:intergenic 35.0%
TTGCCTTAATGTACTACTGT+TGG - chr4_2:17031031-17031050 Msa0591990:intron 35.0%
TGGTATATCACCTAAGCTTT+AGG - chr4_2:17031051-17031070 Msa0591990:intron 35.0%
!! ATTCCTTTAAGGTCTATAGC+TGG - chr4_2:17031156-17031175 Msa0591990:intron 35.0%
!!! GGCCATTTTTAGTGCTAATA+TGG + chr4_2:17031496-17031515 None:intergenic 35.0%
ACTAAAAATGGCCATATCAG+AGG - chr4_2:17031503-17031522 Msa0591990:intron 35.0%
CATCTATAAGACCTCTGATA+TGG + chr4_2:17031517-17031536 None:intergenic 35.0%
! ACTTTCCTCCCTAGATTTTA+TGG + chr4_2:17031700-17031719 None:intergenic 35.0%
!!! TAGGGAGGAAAGTATTTTAC+AGG - chr4_2:17031707-17031726 Msa0591990:intron 35.0%
AAAAAGTAAACATGCTAGCG+AGG + chr4_2:17031961-17031980 None:intergenic 35.0%
AAGATATAGTACTCCGTACA+AGG + chr4_2:17032218-17032237 None:intergenic 35.0%
! TGAGAAATGCTTTTCTCCTT+AGG + chr4_2:17032353-17032372 None:intergenic 35.0%
CTAATACAACACTCTTCAAG+TGG + chr4_2:17032410-17032429 None:intergenic 35.0%
!! TGAGATTTTGATCAAAGGGA+TGG - chr4_2:17032439-17032458 Msa0591990:intron 35.0%
! CTCTAGAGACATAGTGAATA+TGG + chr4_2:17032472-17032491 None:intergenic 35.0%
CCTCGATTATCCTCATAAAT+TGG + chr4_2:17032522-17032541 None:intergenic 35.0%
CCAATTTATGAGGATAATCG+AGG - chr4_2:17032519-17032538 Msa0591990:intron 35.0%
GTTATTTGTGAGGATAATCG+AGG - chr4_2:17032664-17032683 Msa0591990:intron 35.0%
TCTCATATTAGACACACCAA+TGG - chr4_2:17032869-17032888 Msa0591990:intron 35.0%
AAGAGTTTAAGTGTCCTAGT+TGG - chr4_2:17033019-17033038 Msa0591990:intron 35.0%
TTTGTTGAAGAAGGAAGGAA+GGG - chr4_2:17033042-17033061 Msa0591990:intron 35.0%
! AAGAAGCATAGAGAATTCTC+AGG + chr4_2:17033084-17033103 None:intergenic 35.0%
!! ATGGAATGTGAATTGACTTG+AGG - chr4_2:17033295-17033314 Msa0591990:intron 35.0%
! AATTGAAACCTGTCTGGTTT+AGG - chr4_2:17033319-17033338 Msa0591990:intron 35.0%
! CTATATGACAGAGTTGTTTC+AGG - chr4_2:17033568-17033587 Msa0591990:intron 35.0%
! AATAGCTAGGTTGGATGATA+TGG - chr4_2:17033603-17033622 Msa0591990:intron 35.0%
CCAGAATTGTGATCTTAAAG+TGG + chr4_2:17033633-17033652 None:intergenic 35.0%
!! CCACTTTAAGATCACAATTC+TGG - chr4_2:17033630-17033649 Msa0591990:intron 35.0%
TTTCTACAATCTCTATGCCT+CGG + chr4_2:17033664-17033683 None:intergenic 35.0%
AGGCATAGAGATTGTAGAAA+AGG - chr4_2:17033664-17033683 Msa0591990:intron 35.0%
TGTAGAAAAGGTTTGGACAT+TGG - chr4_2:17033676-17033695 Msa0591990:intron 35.0%
! ATGCACTCTTTCATTTTCTC+AGG + chr4_2:17033828-17033847 None:intergenic 35.0%
GAGTGCATTTCAATACACAT+TGG - chr4_2:17033840-17033859 Msa0591990:intron 35.0%
TTTACTACCTTCCTTGAACA+TGG - chr4_2:17033901-17033920 Msa0591990:intron 35.0%
!! TTCACTGAAAAAGGTGTTGA+AGG + chr4_2:17033983-17034002 None:intergenic 35.0%
TATATCATAAGAGTAGGCAC+TGG + chr4_2:17034081-17034100 None:intergenic 35.0%
AACATGCTACTATCCAAGTT+GGG + chr4_2:17034331-17034350 None:intergenic 35.0%
TAACATGCTACTATCCAAGT+TGG + chr4_2:17034332-17034351 None:intergenic 35.0%
GCATGTACATTCCAAAAGAT+CGG + chr4_2:17034397-17034416 None:intergenic 35.0%
GTAAGAGAAAAATCGTAAGC+TGG + chr4_2:17034435-17034454 None:intergenic 35.0%
TCTTTCATGGAAGAGAAGAT+TGG - chr4_2:17034485-17034504 Msa0591990:intron 35.0%
! CTTATTTGTTGCAACAGCTA+AGG - chr4_2:17034554-17034573 Msa0591990:intron 35.0%
GAGGACAAAGAAATATCTCA+CGG + chr4_2:17034613-17034632 None:intergenic 35.0%
TCTAGTCAGTGTATCTTTCT+TGG + chr4_2:17034654-17034673 None:intergenic 35.0%
CATGATGCAATTTAAACGAG+GGG - chr4_2:17034960-17034979 Msa0591990:intron 35.0%
AATTTAAACGAGGGGTTAGA+AGG - chr4_2:17034968-17034987 Msa0591990:intron 35.0%
!! ATCCTTTGTGTTTTAGGCTA+GGG + chr4_2:17035271-17035290 None:intergenic 35.0%
!! AATCCTTTGTGTTTTAGGCT+AGG + chr4_2:17035272-17035291 None:intergenic 35.0%
!!! GGATTACACAGTTTTTAGGT+AGG + chr4_2:17035410-17035429 None:intergenic 35.0%
! CTTCGGATTACACAGTTTTT+AGG + chr4_2:17035414-17035433 None:intergenic 35.0%
CTAAAAACTGTGTAATCCGA+AGG - chr4_2:17035412-17035431 Msa0591990:intron 35.0%
TTTAAATATGGCTCTCCAAC+AGG + chr4_2:17035456-17035475 None:intergenic 35.0%
! AAGTTCTAGCCGATTGAAAT+TGG - chr4_2:17035478-17035497 Msa0591990:intron 35.0%
TCACACGTACCAATTTCAAT+CGG + chr4_2:17035490-17035509 None:intergenic 35.0%
CATAAAATATGTAAGGTCCG+GGG + chr4_2:17035643-17035662 None:intergenic 35.0%
GCATAAAATATGTAAGGTCC+GGG + chr4_2:17035644-17035663 None:intergenic 35.0%
TGTGTAGGGAATTTACACAT+TGG + chr4_2:17035945-17035964 None:intergenic 35.0%
ACATACAGCTGTCCAAATTA+AGG - chr4_2:17035962-17035981 Msa0591990:intron 35.0%
! GTCTCGTTGTTTCCTTAATT+TGG + chr4_2:17035977-17035996 None:intergenic 35.0%
AATTAAGGAAACAACGAGAC+AGG - chr4_2:17035977-17035996 Msa0591990:intron 35.0%
GGCATATACTTATAGGGTTA+GGG + chr4_2:17036238-17036257 None:intergenic 35.0%
AGGCATATACTTATAGGGTT+AGG + chr4_2:17036239-17036258 None:intergenic 35.0%
TAGTCTACGAAGAGAAGTAA+AGG + chr4_2:17036259-17036278 None:intergenic 35.0%
AATTGCAATAACCTTGAGAC+CGG + chr4_2:17036446-17036465 None:intergenic 35.0%
ATCAGAAGCTGTATTGCATT+TGG + chr4_2:17036665-17036684 None:intergenic 35.0%
TTCTGATGCCTTGAATTTGT+TGG - chr4_2:17029903-17029922 Msa0591990:CDS 35.0%
! TGAGTTGTAGGGTAACATTT+TGG + chr4_2:17036774-17036793 None:intergenic 35.0%
CATGAAGTCTATTGAATGTG+GGG - chr4_2:17036957-17036976 Msa0591990:CDS 35.0%
TAAGCCTTTGGTTGAAAAAG+AGG - chr4_2:17036996-17037015 Msa0591990:intron 35.0%
!!! TTGACCTCTTTTTCAACCAA+AGG + chr4_2:17037003-17037022 None:intergenic 35.0%
! CTTTGCAAGTGTTTCTTTTG+AGG + chr4_2:17037145-17037164 None:intergenic 35.0%
CTATATGCTGTCAATCAACT+AGG - chr4_2:17037207-17037226 Msa0591990:intron 35.0%
AAAACTAACCTGTAAATGGC+TGG + chr4_2:17037396-17037415 None:intergenic 35.0%
AGTAGTGAATTATGCAGTCA+TGG - chr4_2:17037583-17037602 Msa0591990:intron 35.0%
TCAACATATGGGAACAAGTT+GGG + chr4_2:17038012-17038031 None:intergenic 35.0%
ATCAACATATGGGAACAAGT+TGG + chr4_2:17038013-17038032 None:intergenic 35.0%
CACTTTCCTCAACTCTATTG+AGG - chr4_2:17029706-17029725 Msa0591990:CDS 40.0%
ACATCTCCTCAATAGAGTTG+AGG + chr4_2:17029715-17029734 None:intergenic 40.0%
TGATGCTCATATGCCAAACA+TGG - chr4_2:17029957-17029976 Msa0591990:intron 40.0%
AATGTGGGGCTTGTACATAT+TGG - chr4_2:17030167-17030186 Msa0591990:intron 40.0%
TTGACGTCTTCTTCAACCAA+AGG + chr4_2:17030199-17030218 None:intergenic 40.0%
TGGCAACATGTTGTCAGAAA+CGG - chr4_2:17030226-17030245 Msa0591990:intron 40.0%
TGAAATTGTTGGAAGCTTGG+TGG - chr4_2:17030270-17030289 Msa0591990:intron 40.0%
TCAAACTCAATCGATCGATC+AGG - chr4_2:17030831-17030850 Msa0591990:intron 40.0%
CAGCTAGAAAACCATCATTC+CGG + chr4_2:17030897-17030916 None:intergenic 40.0%
!!! ATGATGGTTTTCTAGCTGAG+TGG - chr4_2:17030899-17030918 Msa0591990:CDS 40.0%
GAACCAGCTATAGACCTTAA+AGG + chr4_2:17031162-17031181 None:intergenic 40.0%
! GTGCTTTCCCATAACAGTTT+TGG + chr4_2:17031237-17031256 None:intergenic 40.0%
AAACTCAGGCTCTTTGACAA+CGG - chr4_2:17031330-17031349 Msa0591990:intron 40.0%
ACTTCAGAGACCAATGTGTA+AGG - chr4_2:17031413-17031432 Msa0591990:intron 40.0%
CTTCAGAGACCAATGTGTAA+GGG - chr4_2:17031414-17031433 Msa0591990:intron 40.0%
TTACGTTGCAAGACGTCTAT+AGG + chr4_2:17031650-17031669 None:intergenic 40.0%
GAAGTCCATAAAATCTAGGG+AGG - chr4_2:17031692-17031711 Msa0591990:intron 40.0%
TACAGGTTACTGCCTAGAAT+TGG - chr4_2:17031724-17031743 Msa0591990:intron 40.0%
TCTTCAAGTGGACGGTATTA+AGG + chr4_2:17032398-17032417 None:intergenic 40.0%
TACAACACTCTTCAAGTGGA+CGG + chr4_2:17032406-17032425 None:intergenic 40.0%
TATGAGGATAATCGAGGTTC+TGG - chr4_2:17032525-17032544 Msa0591990:intron 40.0%
TCGATCTGTGACTATAGACT+AGG - chr4_2:17032688-17032707 Msa0591990:intron 40.0%
CAATTACACAATGACCTACC+TGG + chr4_2:17032845-17032864 None:intergenic 40.0%
CCTTCTTCAACAAACCAACT+AGG + chr4_2:17033036-17033055 None:intergenic 40.0%
!! CCTAGTTGGTTTGTTGAAGA+AGG - chr4_2:17033033-17033052 Msa0591990:intron 40.0%
!! GTTGGTTTGTTGAAGAAGGA+AGG - chr4_2:17033037-17033056 Msa0591990:intron 40.0%
! GTTTGTTGAAGAAGGAAGGA+AGG - chr4_2:17033041-17033060 Msa0591990:intron 40.0%
TTGTTGAAGAAGGAAGGAAG+GGG - chr4_2:17033043-17033062 Msa0591990:intron 40.0%
AAGTCAGCTCAGTTTCTACA+TGG - chr4_2:17033276-17033295 Msa0591990:intron 40.0%
TGAGGTAATTGAAACCTGTC+TGG - chr4_2:17033313-17033332 Msa0591990:intron 40.0%
GGTTTGGACATTGGATGATA+TGG - chr4_2:17033685-17033704 Msa0591990:intron 40.0%
TCAATACACATTGGTCAAGC+TGG - chr4_2:17033849-17033868 Msa0591990:intron 40.0%
AAGGTAGTAAAGTTCCAAGC+CGG + chr4_2:17033892-17033911 None:intergenic 40.0%
!! TTTTTCAGTGAAACCAGTGC+CGG - chr4_2:17033991-17034010 Msa0591990:intron 40.0%
GATATCCATCAATCCCAACT+TGG - chr4_2:17034315-17034334 Msa0591990:intron 40.0%
! ACTATCCAAGTTGGGATTGA+TGG + chr4_2:17034323-17034342 None:intergenic 40.0%
! AAGTCTGCTATCCGATCTTT+TGG - chr4_2:17034383-17034402 Msa0591990:intron 40.0%
! CAAGGTGCTTTGTTCTTTCA+TGG - chr4_2:17034472-17034491 Msa0591990:intron 40.0%
AATTCACCAGTTCACCTTCA+AGG + chr4_2:17034726-17034745 None:intergenic 40.0%
AGGTGAACTGGTGAATTTCT+AGG - chr4_2:17034729-17034748 Msa0591990:intron 40.0%
GAAAGAACAAGTCTCTTCCT+AGG - chr4_2:17034751-17034770 Msa0591990:intron 40.0%
ATGTAGGGTGTGAAAGATGT+TGG - chr4_2:17034823-17034842 Msa0591990:intron 40.0%
TTCGTATTCCCTCAACGAAT+TGG - chr4_2:17035240-17035259 Msa0591990:intron 40.0%
AACTGTGGGATTAAACCCTT+CGG + chr4_2:17035431-17035450 None:intergenic 40.0%
!!! ATTTTTTTTTGTGGTGGCCG+AGG - chr4_2:17035611-17035630 Msa0591990:intron 40.0%
TTTGGACAGCTGTATGTGTA+GGG + chr4_2:17035959-17035978 None:intergenic 40.0%
ATTTGGACAGCTGTATGTGT+AGG + chr4_2:17035960-17035979 None:intergenic 40.0%
!!! GGGTTTTGTTGGATCAACTA+AGG + chr4_2:17036042-17036061 None:intergenic 40.0%
! CTAGGGTTTGTGTTTTGCAA+AGG + chr4_2:17036302-17036321 None:intergenic 40.0%
ACATCTCCTCAATAGAGTTG+AGG + chr4_2:17029715-17029734 None:intergenic 40.0%
TGATGCTCATATGCCAAACA+TGG - chr4_2:17029957-17029976 Msa0591990:intron 40.0%
! GACAGGAATGTTGAGTTGTA+GGG + chr4_2:17036785-17036804 None:intergenic 40.0%
! TGACAGGAATGTTGAGTTGT+AGG + chr4_2:17036786-17036805 None:intergenic 40.0%
!! CTTCATGATAGAACTTGCTG+TGG + chr4_2:17036944-17036963 None:intergenic 40.0%
CGAATATTGGACTAAGCCTT+TGG - chr4_2:17036984-17037003 Msa0591990:intron 40.0%
AAAAAGAGGTCAAGACCATG+TGG - chr4_2:17037010-17037029 Msa0591990:intron 40.0%
TCTTACTACATGTTGCCACA+TGG + chr4_2:17037028-17037047 None:intergenic 40.0%
TGTACGTACCTAAGTCTAGT+TGG - chr4_2:17037452-17037471 Msa0591990:CDS 40.0%
AATCCTAGCCAACTAGACTT+AGG + chr4_2:17037463-17037482 None:intergenic 40.0%
AGCTCAACCGAAGAGAAAAA+AGG - chr4_2:17037796-17037815 Msa0591990:intron 40.0%
TCGAATTCAGGAGAAAACTC+TGG + chr4_2:17037900-17037919 None:intergenic 40.0%
GCAATTGTCATGACATTGTG+TGG + chr4_2:17037923-17037942 None:intergenic 40.0%
CAATAACCTTGAGACCAGCA+GGG + chr4_2:17029670-17029689 None:intergenic 45.0%
! AAGAAGACGTCAAGAGCATG+TGG - chr4_2:17030206-17030225 Msa0591990:intron 45.0%
ATTCTGGCGACCAAGACAAA+CGG + chr4_2:17030363-17030382 None:intergenic 45.0%
CTATGGGCAGTCAATCAACT+AGG - chr4_2:17030397-17030416 Msa0591990:intron 45.0%
TCGGCTGATGAAACAAAACG+TGG - chr4_2:17030739-17030758 Msa0591990:CDS 45.0%
CGGCTGATGAAACAAAACGT+GGG - chr4_2:17030740-17030759 Msa0591990:CDS 45.0%
! TCAAGACGAGTGCATTGACA+AGG - chr4_2:17030792-17030811 Msa0591990:intron 45.0%
TCAAACTGAGCTGACTGATC+AGG - chr4_2:17030870-17030889 Msa0591990:intron 45.0%
!! CTAGCTGAGTGGATTGATTG+CGG - chr4_2:17030910-17030929 Msa0591990:CDS 45.0%
!! TAGCTGAGTGGATTGATTGC+GGG - chr4_2:17030911-17030930 Msa0591990:CDS 45.0%
GGCCATAAGGTTGTAAAGGT+AGG + chr4_2:17030944-17030963 None:intergenic 45.0%
AGGTAGCATCCCTTACACAT+TGG + chr4_2:17031426-17031445 None:intergenic 45.0%
GGATGCTACCTTTCAGTGAA+TGG - chr4_2:17031435-17031454 Msa0591990:intron 45.0%
CTCTGCAACCATTCACTGAA+AGG + chr4_2:17031446-17031465 None:intergenic 45.0%
AAGTAAACATGCTAGCGAGG+AGG + chr4_2:17031958-17031977 None:intergenic 45.0%
TGCACAAATGCACATTGCTC+AGG - chr4_2:17032002-17032021 Msa0591990:intron 45.0%
GCACAAATGCACATTGCTCA+GGG - chr4_2:17032003-17032022 Msa0591990:intron 45.0%
TCATGGTTTGAGGAGTCCTA+AGG - chr4_2:17032334-17032353 Msa0591990:intron 45.0%
!! GAGGTTCTGGTTTGCCATTT+GGG - chr4_2:17032538-17032557 Msa0591990:intron 45.0%
!! AGGTTCTGGTTTGCCATTTG+GGG - chr4_2:17032539-17032558 Msa0591990:intron 45.0%
TTCAGGAAGTCATCCCCAAA+TGG + chr4_2:17032555-17032574 None:intergenic 45.0%
CAACGTATCCTAAACCAGAC+AGG + chr4_2:17033330-17033349 None:intergenic 45.0%
! CTGTCTGGTTTAGGATACGT+TGG - chr4_2:17033328-17033347 Msa0591990:intron 45.0%
! CTCCCTTTTGAATTTGCGAG+CGG + chr4_2:17033725-17033744 None:intergenic 45.0%
CTAACTGCCATGTTCAAGGA+AGG + chr4_2:17033911-17033930 None:intergenic 45.0%
GAGACTAACTGCCATGTTCA+AGG + chr4_2:17033915-17033934 None:intergenic 45.0%
! GAACATGGCAGTTAGTCTCA+TGG - chr4_2:17033916-17033935 Msa0591990:intron 45.0%
CTTAGGGACATGACTGTAAG+AGG - chr4_2:17033946-17033965 Msa0591990:intron 45.0%
!! GGCACTGGTTTCACTGAAAA+AGG + chr4_2:17033992-17034011 None:intergenic 45.0%
AGCGTGGAACATATGCTTTC+CGG + chr4_2:17034013-17034032 None:intergenic 45.0%
! TCTACCGAGCTCTAACTTGT+GGG + chr4_2:17034297-17034316 None:intergenic 45.0%
! ATCTACCGAGCTCTAACTTG+TGG + chr4_2:17034298-17034317 None:intergenic 45.0%
AAGGTTTCTCTGATGCTGAC+TGG + chr4_2:17034707-17034726 None:intergenic 45.0%
CAGCATCAGAGAAACCTTGA+AGG - chr4_2:17034709-17034728 Msa0591990:intron 45.0%
GAGAAACCTTGAAGGTGAAC+TGG - chr4_2:17034717-17034736 Msa0591990:intron 45.0%
! AGAAGGAGTGGACATTGGTT+TGG - chr4_2:17034985-17035004 Msa0591990:intron 45.0%
!! GTGGACATTGGTTTGGAAAC+AGG - chr4_2:17034992-17035011 Msa0591990:intron 45.0%
AGCGATCTCGATTGAATCTC+TGG - chr4_2:17035177-17035196 Msa0591990:intron 45.0%
GCGATCTCGATTGAATCTCT+GGG - chr4_2:17035178-17035197 Msa0591990:intron 45.0%
TGCCCTAGCCTAAAACACAA+AGG - chr4_2:17035266-17035285 Msa0591990:intron 45.0%
TAATCCCACAGTTCACCTGT+TGG - chr4_2:17035438-17035457 Msa0591990:intron 45.0%
CACTGTCCTCAACTCTATTG+AGG - chr4_2:17036477-17036496 Msa0591990:intron 45.0%
AATGTGGGGCTTGCGAATAT+TGG - chr4_2:17036971-17036990 Msa0591990:intron 45.0%
TGAAATTGTTGGAAGCTCGG+TGG - chr4_2:17037080-17037099 Msa0591990:intron 45.0%
ACATGTTGCCAGCCATTTAC+AGG - chr4_2:17037385-17037404 Msa0591990:CDS 45.0%
GTACCTAAGTCTAGTTGGCT+AGG - chr4_2:17037457-17037476 Msa0591990:CDS 45.0%
AGAAGCTACTCACTCAATGC+CGG - chr4_2:17037867-17037886 Msa0591990:intron 45.0%
GACATTGTGTGGTCGAATTC+AGG + chr4_2:17037912-17037931 None:intergenic 45.0%
ATTGCGACACACGACAACAA+TGG - chr4_2:17037938-17037957 Msa0591990:intron 45.0%
!!! AATTCTATTTATTTTTTTTA+AGG + chr4_2:17032642-17032661 None:intergenic 5.0%
TGAGACCAGCAGGGAATGAT+GGG + chr4_2:17029661-17029680 None:intergenic 50.0%
TTGAGACCAGCAGGGAATGA+TGG + chr4_2:17029662-17029681 None:intergenic 50.0%
! ATCATTCCCTGCTGGTCTCA+AGG - chr4_2:17029661-17029680 Msa0591990:CDS 50.0%
GCAATAACCTTGAGACCAGC+AGG + chr4_2:17029671-17029690 None:intergenic 50.0%
CAAAGAAGGCCCGTTTGTCT+TGG - chr4_2:17030350-17030369 Msa0591990:intron 50.0%
TTCTGGCGACCAAGACAAAC+GGG + chr4_2:17030362-17030381 None:intergenic 50.0%
GATGTTCCAGGTTTGGGTGT+AGG - chr4_2:17030549-17030568 Msa0591990:CDS 50.0%
ACATGTCCTACACCCAAACC+TGG + chr4_2:17030558-17030577 None:intergenic 50.0%
ACTGATCAGGACCGGAATGA+TGG - chr4_2:17030883-17030902 Msa0591990:intron 50.0%
!! TGAGTGGATTGATTGCGGGA+CGG - chr4_2:17030915-17030934 Msa0591990:CDS 50.0%
!! CGAGGTTCTGGTTTGCCATT+TGG - chr4_2:17032537-17032556 Msa0591990:intron 50.0%
! CAATTCTGGAAGGAACACCG+AGG - chr4_2:17033644-17033663 Msa0591990:intron 50.0%
ACGCCGCTCGCAAATTCAAA+AGG - chr4_2:17033719-17033738 Msa0591990:intron 50.0%
CGCCGCTCGCAAATTCAAAA+GGG - chr4_2:17033720-17033739 Msa0591990:intron 50.0%
CATTGGTCAAGCTGGTATCC+CGG - chr4_2:17033857-17033876 Msa0591990:intron 50.0%
AGTCTCATGGCCAGATGCTT+AGG - chr4_2:17033929-17033948 Msa0591990:intron 50.0%
GTCTCATGGCCAGATGCTTA+GGG - chr4_2:17033930-17033949 Msa0591990:intron 50.0%
CAGTCATGTCCCTAAGCATC+TGG + chr4_2:17033942-17033961 None:intergenic 50.0%
AGGGACATGACTGTAAGAGG+AGG - chr4_2:17033949-17033968 Msa0591990:intron 50.0%
GAACATATGCTTTCCGGCAC+TGG + chr4_2:17034007-17034026 None:intergenic 50.0%
AAATCTACGAAGGCGAAGCG+TGG + chr4_2:17034029-17034048 None:intergenic 50.0%
ACGCTTCGCCTTCGTAGATT+TGG - chr4_2:17034028-17034047 Msa0591990:intron 50.0%
!! CTGACTTCGTTGGTGATGGT+GGG + chr4_2:17034056-17034075 None:intergenic 50.0%
!! TCTGACTTCGTTGGTGATGG+TGG + chr4_2:17034057-17034076 None:intergenic 50.0%
! GGTTCTGACTTCGTTGGTGA+TGG + chr4_2:17034060-17034079 None:intergenic 50.0%
! TACCGAGCTCTAACTTGTGG+GGG + chr4_2:17034295-17034314 None:intergenic 50.0%
! CTACCGAGCTCTAACTTGTG+GGG + chr4_2:17034296-17034315 None:intergenic 50.0%
AAACGAGGGGTTAGAAGGAG+TGG - chr4_2:17034973-17034992 Msa0591990:intron 50.0%
GGGTTAGAAGGAGTGGACAT+TGG - chr4_2:17034980-17034999 Msa0591990:intron 50.0%
CTCACTTGAGTGTGCCTCTA+GGG - chr4_2:17035201-17035220 Msa0591990:intron 50.0%
AGGGAATACGAACCACGTTG+TGG + chr4_2:17035232-17035251 None:intergenic 50.0%
GGGCAAGTCCAATTCGTTGA+GGG + chr4_2:17035251-17035270 None:intergenic 50.0%
AGGGCAAGTCCAATTCGTTG+AGG + chr4_2:17035252-17035271 None:intergenic 50.0%
CTCTCCAACAGGTGAACTGT+GGG + chr4_2:17035445-17035464 None:intergenic 50.0%
CAATAACCTTGAGACCGGCT+GGG + chr4_2:17036441-17036460 None:intergenic 50.0%
CAAAGAAGGCCCGTTTGTCT+TGG - chr4_2:17030350-17030369 Msa0591990:intron 50.0%
TTCTGGCGACCAAGACAAAC+GGG + chr4_2:17030362-17030381 None:intergenic 50.0%
GTTCTGGCGACCAAGACAAA+CGG + chr4_2:17037173-17037192 None:intergenic 50.0%
AGAAACCGCTGATGCAGTTC+TGG + chr4_2:17037189-17037208 None:intergenic 50.0%
AGAAAACTCTGGTCCTGCTC+CGG + chr4_2:17037889-17037908 None:intergenic 50.0%
CGACACACGACAACAATGGA+TGG - chr4_2:17037942-17037961 Msa0591990:CDS 50.0%
GACAACCCATCATTCCCTGC+TGG - chr4_2:17029653-17029672 Msa0591990:CDS 55.0%
CTGAGCTGACTGATCAGGAC+CGG - chr4_2:17030875-17030894 Msa0591990:intron 55.0%
!! GAGTGGATTGATTGCGGGAC+GGG - chr4_2:17030916-17030935 Msa0591990:CDS 55.0%
ACATGCTAGCGAGGAGGTAG+AGG + chr4_2:17031952-17031971 None:intergenic 55.0%
GCACATTGCTCAGGGAACTC+TGG - chr4_2:17032011-17032030 Msa0591990:intron 55.0%
! GGTATCCCGGTCTGAAATGC+CGG - chr4_2:17033870-17033889 Msa0591990:intron 55.0%
TCCAAGCCGGCATTTCAGAC+CGG + chr4_2:17033879-17033898 None:intergenic 55.0%
! GGTGGGCTCCAAATCTACGA+AGG + chr4_2:17034039-17034058 None:intergenic 55.0%
!! GGCACTGGTTCTGACTTCGT+TGG + chr4_2:17034066-17034085 None:intergenic 55.0%
TCCCCCCACAAGTTAGAGCT+CGG - chr4_2:17034290-17034309 Msa0591990:intron 55.0%
! ACCGAGCTCTAACTTGTGGG+GGG + chr4_2:17034294-17034313 None:intergenic 55.0%
GCTCACTTGAGTGTGCCTCT+AGG - chr4_2:17035200-17035219 Msa0591990:intron 55.0%
ACGTTGTGGAGACACCCTAG+AGG + chr4_2:17035218-17035237 None:intergenic 55.0%
! TCTAGGGTGTCTCCACAACG+TGG - chr4_2:17035217-17035236 Msa0591990:intron 55.0%
GCTCTCCAACAGGTGAACTG+TGG + chr4_2:17035446-17035465 None:intergenic 55.0%
AAGGTCCGGGGTTTGAACCT+CGG + chr4_2:17035631-17035650 None:intergenic 55.0%
GCTTCTCTATTCCCGCTGTC+TGG - chr4_2:17036014-17036033 Msa0591990:intron 55.0%
! TCAACTAAGGCGCCAGACAG+CGG + chr4_2:17036029-17036048 None:intergenic 55.0%
GACAACCCATCATTCCCAGC+CGG - chr4_2:17036424-17036443 Msa0591990:intron 55.0%
TGAGACCGGCTGGGAATGAT+GGG + chr4_2:17036432-17036451 None:intergenic 55.0%
TTGAGACCGGCTGGGAATGA+TGG + chr4_2:17036433-17036452 None:intergenic 55.0%
ATCATTCCCAGCCGGTCTCA+AGG - chr4_2:17036432-17036451 Msa0591990:intron 55.0%
GCAATAACCTTGAGACCGGC+TGG + chr4_2:17036442-17036461 None:intergenic 55.0%
TACTCACTCAATGCCGGAGC+AGG - chr4_2:17037873-17037892 Msa0591990:intron 55.0%
CCAAGCCGGCATTTCAGACC+GGG + chr4_2:17033878-17033897 None:intergenic 60.0%
! CAACTAAGGCGCCAGACAGC+GGG + chr4_2:17036028-17036047 None:intergenic 60.0%
GGTCGCCAGAACTGCATCAG+CGG - chr4_2:17037181-17037200 Msa0591990:intron 60.0%
! CCCGGTCTGAAATGCCGGCT+TGG - chr4_2:17033875-17033894 Msa0591990:intron 65.0%
GGTGGCCGAGGTTCAAACCC+CGG - chr4_2:17035623-17035642 Msa0591990:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 17029638 17038059 17029638 ID=Msa0591990;Name=Msa0591990
chr4_2 mRNA 17029638 17038059 17029638 ID=Msa0591990-mRNA-1;Parent=Msa0591990;Name=Msa0591990-mRNA-1;_AED=0.14;_eAED=0.15;_QI=0|0|0|1|0.77|0.8|10|0|547
chr4_2 exon 17037942 17038059 17037942 ID=Msa0591990-mRNA-1:exon:4948;Parent=Msa0591990-mRNA-1
chr4_2 exon 17037664 17037813 17037664 ID=Msa0591990-mRNA-1:exon:4947;Parent=Msa0591990-mRNA-1
chr4_2 exon 17037336 17037575 17037336 ID=Msa0591990-mRNA-1:exon:4946;Parent=Msa0591990-mRNA-1
chr4_2 exon 17037104 17037180 17037104 ID=Msa0591990-mRNA-1:exon:4945;Parent=Msa0591990-mRNA-1
chr4_2 exon 17036793 17036982 17036793 ID=Msa0591990-mRNA-1:exon:4944;Parent=Msa0591990-mRNA-1
chr4_2 exon 17031171 17031281 17031171 ID=Msa0591990-mRNA-1:exon:4943;Parent=Msa0591990-mRNA-1
chr4_2 exon 17030889 17031038 17030889 ID=Msa0591990-mRNA-1:exon:4942;Parent=Msa0591990-mRNA-1
chr4_2 exon 17030526 17030771 17030526 ID=Msa0591990-mRNA-1:exon:4941;Parent=Msa0591990-mRNA-1
chr4_2 exon 17030291 17030367 17030291 ID=Msa0591990-mRNA-1:exon:4940;Parent=Msa0591990-mRNA-1
chr4_2 exon 17029638 17029922 17029638 ID=Msa0591990-mRNA-1:exon:4939;Parent=Msa0591990-mRNA-1
chr4_2 CDS 17037942 17038059 17037942 ID=Msa0591990-mRNA-1:cds;Parent=Msa0591990-mRNA-1
chr4_2 CDS 17037664 17037813 17037664 ID=Msa0591990-mRNA-1:cds;Parent=Msa0591990-mRNA-1
chr4_2 CDS 17037336 17037575 17037336 ID=Msa0591990-mRNA-1:cds;Parent=Msa0591990-mRNA-1
chr4_2 CDS 17037104 17037180 17037104 ID=Msa0591990-mRNA-1:cds;Parent=Msa0591990-mRNA-1
chr4_2 CDS 17036793 17036982 17036793 ID=Msa0591990-mRNA-1:cds;Parent=Msa0591990-mRNA-1
chr4_2 CDS 17031171 17031281 17031171 ID=Msa0591990-mRNA-1:cds;Parent=Msa0591990-mRNA-1
chr4_2 CDS 17030889 17031038 17030889 ID=Msa0591990-mRNA-1:cds;Parent=Msa0591990-mRNA-1
chr4_2 CDS 17030526 17030771 17030526 ID=Msa0591990-mRNA-1:cds;Parent=Msa0591990-mRNA-1
chr4_2 CDS 17030291 17030367 17030291 ID=Msa0591990-mRNA-1:cds;Parent=Msa0591990-mRNA-1
chr4_2 CDS 17029638 17029922 17029638 ID=Msa0591990-mRNA-1:cds;Parent=Msa0591990-mRNA-1
Gene Sequence

>Msa0591990

ATGGCTGTTTTCGTTGACAACCCATCATTCCCTGCTGGTCTCAAGGTTATTGCCATTGATCATGACATCACTTTCCTCAACTCTATTGAGGAGATGTGTAATCGATTCCATTATCAAGTTACCAAATGTAACACAGCTTCTGATGCCTTGAATTTGTTGGAAAGAATGGACTGTTTCGATTTAATGTTGATTGATGCTCATATGCCAAACATGGATGCTTATGACTTTGTCCAAAATGTTACCCTAAAACTCAACATTCCTGTCATTATGATGGCTGTTGATTTCGCAAAAAGTTCTATTATGAAGTCTATTCAATGTGGGGCTTGTACATATTGGACTAAGCCTTTGGTTGAAGAAGACGTCAAGAGCATGTGGCAACATGTTGTCAGAAACGGTTCGACTGAAAATAAAGAATATGAAATTGTTGGAAGCTTGGTGGTTCAAGAAAATAGAAAACGGGGTAGAGAAGATGATAATGCCTCAAAAGAAACACATGCAAAGAAGGCCCAAGCAAGACCCAAAATGATTCTCAAAATTATGGATGTTCCAGGTTTGGGTGTAGGACATGTTGCTAGTCATTTACAGAAATATAGGATTCATTTGAAGAGATCGGCTGATGAAACAAAACGTGGGAAGAAAAAATCAAAGTGGAGTGATAGCTTTCAAGACGAGTGCATTGACAAGGTTCATAGTGATGGCTTTCAAACTCAATCGATCGATCAGGACCAGAACGATAACTTTCAAACTGAGCTGACTGATCAGGACCGGAATGATGTTTTCACTGACAACCCATCATTCCCAGCCGGTCTCAAGGTTATTGCAATTGATCATGACATCACTGTCCTCAACTCTATTGAGGAGATGTGTAATCGATATCATTATCAAGTTACCAAATGCAATACAGCTTCTGATGCCTTGAATTTGTTGGAAAGAAAGGACTGTTTCGATGTAATGTTGATTGATGCTCATATGCCAAACATGGATGTTTATGACTTTGTCCAAAATGTTACCCTACAACTCAACATTCCTGTCATTATGATGGCTGTTGATTCCACAGCAAGTTCTATCATGAAGTCTATTGAATGTGGGGCTTGCGAATATTGGACTAAGCCTTTGGTTGAAAAAGAGGTCAAGACCATGTGGCAACATGTAGTAAGAATTAGAAACTGTTTGACTGAAAATAAAGAATATGAAATTGTTGGAAGCTCGGTGGTTCAAAAAAATAGAAAACGGGGTAGAGAAGATGCTAATGCCTCAAAAGAAACACTTGCAAAGAAGGCCCGGGCAACGCCAAAAAAGATTCTGAAAATCATGGATGTTCCCGATATGAAAAAAGAACATGTTGCCAGCCATTTACAGAAGTATAGAAATTATTTAAAGAGCTCAACCGAAGAGAAAAAAGGTAGAATGAAAAAATCAAAGAGGAGTCCTTTTGAAACACAATTTAGCGTAGAAGCTACTCACTCAATGCCGGAGCAGGACCAGAGTTTTCTCCTGAATTCGACCACACAATGTCATGACAATTGCGACACACGACAACAATGGATGGAAATTAGTGAATCCGACATTACTAACAACATTTTTTCAGACTTGCCCAACTTGTTCCCATATGTTGATGATGATTTATCATCACTTGTGTGGTGA

Protein sequence

>Msa0591990

MAVFVDNPSFPAGLKVIAIDHDITFLNSIEEMCNRFHYQVTKCNTASDALNLLERMDCFDLMLIDAHMPNMDAYDFVQNVTLKLNIPVIMMAVDFAKSSIMKSIQCGACTYWTKPLVEEDVKSMWQHVVRNGSTENKEYEIVGSLVVQENRKRGREDDNASKETHAKKAQARPKMILKIMDVPGLGVGHVASHLQKYRIHLKRSADETKRGKKKSKWSDSFQDECIDKVHSDGFQTQSIDQDQNDNFQTELTDQDRNDVFTDNPSFPAGLKVIAIDHDITVLNSIEEMCNRYHYQVTKCNTASDALNLLERKDCFDVMLIDAHMPNMDVYDFVQNVTLQLNIPVIMMAVDSTASSIMKSIECGACEYWTKPLVEKEVKTMWQHVVRIRNCLTENKEYEIVGSSVVQKNRKRGREDANASKETLAKKARATPKKILKIMDVPDMKKEHVASHLQKYRNYLKSSTEEKKGRMKKSKRSPFETQFSVEATHSMPEQDQSFLLNSTTQCHDNCDTRQQWMEISESDITNNIFSDLPNLFPYVDDDLSSLVW*