AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0594550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0594550 MtrunA17_Chr4g0013361 97.635 296 7 0 1 296 1 296 0.0 596
Msa0594550 MtrunA17_Chr8g0334881 41.692 331 131 8 1 292 1 308 6.09e-63 201
Msa0594550 MtrunA17_Chr1g0154031 54.386 114 50 2 10 122 76 188 7.46e-37 135
Msa0594550 MtrunA17_Chr3g0099131 54.206 107 48 1 10 116 41 146 1.12e-36 137
Msa0594550 MtrunA17_Chr8g0354661 44.966 149 75 4 2 145 25 171 4.83e-35 132
Msa0594550 MtrunA17_Chr5g0410961 43.750 144 77 3 10 151 12 153 9.48e-35 128
Msa0594550 MtrunA17_Chr7g0274581 51.852 108 51 1 6 113 8 114 6.54e-34 122
Msa0594550 MtrunA17_Chr3g0080861 49.533 107 53 1 10 116 37 142 6.60e-34 129
Msa0594550 MtrunA17_Chr1g0193801 47.518 141 68 4 10 147 12 149 1.52e-33 126
Msa0594550 MtrunA17_Chr5g0395281 53.846 104 47 1 10 113 12 114 2.24e-33 124
Msa0594550 MtrunA17_Chr7g0270891 55.140 107 47 1 10 116 12 117 8.09e-33 124
Msa0594550 MtrunA17_Chr2g0323411 47.541 122 60 3 6 124 8 128 9.31e-33 123
Msa0594550 MtrunA17_Chr1g0180391 53.211 109 49 2 8 115 17 124 1.41e-32 120
Msa0594550 MtrunA17_Chr3g0115821 50.962 104 50 1 10 113 12 114 1.89e-32 122
Msa0594550 MtrunA17_Chr6g0453471 50.000 104 51 1 10 113 12 114 2.63e-32 122
Msa0594550 MtrunA17_Chr8g0342541 50.877 114 55 1 10 123 12 124 3.00e-32 122
Msa0594550 MtrunA17_Chr2g0281071 50.000 108 52 2 10 116 13 119 4.76e-32 121
Msa0594550 MtrunA17_Chr4g0060721 49.074 108 54 1 6 113 9 115 4.99e-32 121
Msa0594550 MtrunA17_Chr8g0342521 43.796 137 76 1 10 146 12 147 6.58e-32 121
Msa0594550 MtrunA17_Chr4g0039971 50.000 104 51 1 10 113 13 115 7.88e-32 121
Msa0594550 MtrunA17_Chr4g0053431 56.863 102 42 2 12 113 5 104 9.06e-32 119
Msa0594550 MtrunA17_Chr2g0322521 55.455 110 48 1 7 116 26 134 9.44e-32 121
Msa0594550 MtrunA17_Chr7g0228231 35.294 170 93 4 10 170 14 175 9.53e-32 117
Msa0594550 MtrunA17_Chr7g0254411 41.791 134 77 1 6 139 8 140 1.03e-31 120
Msa0594550 MtrunA17_Chr7g0217221 49.038 104 52 1 10 113 12 114 1.07e-31 119
Msa0594550 MtrunA17_Chr7g0217741 50.000 108 53 1 6 113 8 114 1.15e-31 119
Msa0594550 MtrunA17_Chr7g0261281 46.903 113 58 2 6 117 8 119 1.62e-31 118
Msa0594550 MtrunA17_Chr1g0193371 42.581 155 84 3 10 161 12 164 1.73e-31 120
Msa0594550 MtrunA17_Chr2g0330041 50.000 114 56 1 10 123 12 124 2.40e-31 120
Msa0594550 MtrunA17_Chr1g0194301 47.664 107 55 1 10 116 33 138 2.65e-31 118
Msa0594550 MtrunA17_Chr3g0092401 47.321 112 57 2 6 116 9 119 2.84e-31 118
Msa0594550 MtrunA17_Chr5g0401731 50.394 127 59 3 12 136 15 139 3.71e-31 119
Msa0594550 MtrunA17_Chr2g0309911 51.923 104 49 1 10 113 11 113 3.71e-31 118
Msa0594550 MtrunA17_Chr8g0342481 50.862 116 53 3 10 123 12 125 3.77e-31 120
Msa0594550 MtrunA17_Chr4g0058631 52.885 104 48 1 10 113 12 114 3.99e-31 119
Msa0594550 MtrunA17_Chr5g0397231 51.000 100 48 1 10 109 12 110 3.99e-31 119
Msa0594550 MtrunA17_Chr1g0167661 43.077 130 72 2 6 134 8 136 5.63e-31 116
Msa0594550 MtrunA17_Chr4g0048511 49.074 108 53 2 10 116 13 119 5.66e-31 119
Msa0594550 MtrunA17_Chr4g0042671 43.885 139 72 4 6 141 8 143 6.44e-31 119
Msa0594550 MtrunA17_Chr5g0440761 33.077 260 157 10 11 265 13 260 8.29e-31 116
Msa0594550 MtrunA17_Chr6g0450101 46.154 104 55 1 10 113 14 116 1.09e-30 114
Msa0594550 MtrunA17_Chr2g0327821 32.751 229 142 4 10 233 6 227 1.10e-30 115
Msa0594550 MtrunA17_Chr1g0186061 43.443 122 64 2 11 132 21 137 1.74e-30 115
Msa0594550 MtrunA17_Chr6g0453211 49.000 100 50 1 10 109 12 110 2.33e-30 116
Msa0594550 MtrunA17_Chr1g0167691 46.296 108 57 1 6 113 8 114 2.58e-30 114
Msa0594550 MtrunA17_Chr1g0194291 45.370 108 57 2 3 110 15 120 3.58e-30 114
Msa0594550 MtrunA17_Chr5g0440781 40.237 169 94 6 11 178 13 175 4.66e-30 112
Msa0594550 MtrunA17_Chr2g0328771 46.957 115 60 1 10 124 20 133 4.66e-30 115
Msa0594550 MtrunA17_Chr1g0203411 45.946 111 59 1 6 116 8 117 4.87e-30 115
Msa0594550 MtrunA17_Chr8g0387421 46.789 109 57 1 10 118 12 119 5.21e-30 115
Msa0594550 MtrunA17_Chr2g0311221 48.571 105 53 1 6 110 10 113 5.95e-30 115
Msa0594550 MtrunA17_Chr1g0211161 50.962 104 50 1 10 113 13 115 7.24e-30 112
Msa0594550 MtrunA17_Chr5g0441141 40.237 169 94 6 11 178 13 175 8.75e-30 114
Msa0594550 MtrunA17_Chr3g0117091 51.923 104 49 1 10 113 12 114 8.94e-30 115
Msa0594550 MtrunA17_Chr4g0022931 48.624 109 54 2 10 117 13 120 1.58e-29 113
Msa0594550 MtrunA17_Chr1g0203441 52.427 103 48 1 11 113 14 115 1.83e-29 113
Msa0594550 MtrunA17_Chr8g0385321 45.528 123 64 2 6 128 8 127 1.94e-29 114
Msa0594550 MtrunA17_Chr5g0441131 50.000 108 52 2 10 116 9 115 1.98e-29 110
Msa0594550 MtrunA17_Chr8g0349261 52.381 105 48 2 10 113 13 116 3.53e-29 112
Msa0594550 MtrunA17_Chr1g0187761 47.222 108 56 1 6 113 8 114 3.96e-29 111
Msa0594550 MtrunA17_Chr1g0209661 41.441 111 64 1 6 116 23 132 4.15e-29 112
Msa0594550 MtrunA17_Chr4g0028311 37.629 194 91 7 10 193 12 185 4.37e-29 113
Msa0594550 MtrunA17_Chr5g0435101 44.355 124 65 2 10 133 11 130 4.58e-29 110
Msa0594550 MtrunA17_Chr1g0168661 41.538 130 69 2 11 140 22 144 4.73e-29 111
Msa0594550 MtrunA17_Chr4g0022881 44.643 112 61 1 5 116 7 117 5.91e-29 110
Msa0594550 MtrunA17_Chr4g0032401 45.833 120 64 1 10 129 17 135 7.06e-29 112
Msa0594550 MtrunA17_Chr7g0271241 53.535 99 45 1 10 108 12 109 7.13e-29 113
Msa0594550 MtrunA17_Chr4g0037141 37.805 164 94 4 6 162 8 170 7.29e-29 111
Msa0594550 MtrunA17_Chr4g0022891 45.455 121 63 2 5 123 7 126 8.65e-29 110
Msa0594550 MtrunA17_Chr7g0264641 47.706 109 55 2 6 113 8 115 1.18e-28 110
Msa0594550 MtrunA17_Chr3g0103281 48.148 108 55 1 6 113 8 114 1.23e-28 112
Msa0594550 MtrunA17_Chr5g0417821 45.833 120 61 3 10 126 7 125 1.35e-28 111
Msa0594550 MtrunA17_Chr4g0022901 43.846 130 67 3 10 138 13 137 1.51e-28 110
Msa0594550 MtrunA17_Chr2g0327351 49.524 105 51 2 6 109 8 111 1.79e-28 111
Msa0594550 MtrunA17_Chr4g0044421 50.000 104 50 2 12 114 14 116 2.37e-28 107
Msa0594550 MtrunA17_Chr8g0346561 46.789 109 56 2 10 117 12 119 3.25e-28 110
Msa0594550 MtrunA17_Chr3g0099141 52.326 86 40 1 10 95 40 124 4.25e-28 105
Msa0594550 MtrunA17_Chr5g0434571 44.186 129 65 2 10 138 48 169 4.64e-28 110
Msa0594550 MtrunA17_Chr2g0323351 38.667 150 90 2 10 158 12 160 8.00e-28 108
Msa0594550 MtrunA17_Chr4g0008551 50.000 102 49 2 12 113 38 137 9.01e-28 110
Msa0594550 MtrunA17_Chr3g0131121 43.089 123 67 2 6 128 8 127 1.32e-27 108
Msa0594550 MtrunA17_Chr3g0088461 50.000 104 51 1 10 113 22 124 1.32e-27 109
Msa0594550 MtrunA17_Chr3g0110351 49.038 104 52 1 10 113 12 114 1.41e-27 108
Msa0594550 MtrunA17_Chr1g0192411 47.748 111 56 2 10 119 12 121 1.68e-27 110
Msa0594550 MtrunA17_Chr1g0151941 41.667 132 64 3 10 129 12 142 2.44e-27 107
Msa0594550 MtrunA17_Chr4g0022911 42.222 135 71 3 10 138 13 146 2.60e-27 107
Msa0594550 MtrunA17_Chr4g0030881 47.107 121 54 4 11 122 8 127 2.86e-27 107
Msa0594550 MtrunA17_Chr6g0470971 50.476 105 51 1 11 115 15 118 3.04e-27 107
Msa0594550 MtrunA17_Chr1g0152011 47.706 109 55 2 6 113 8 115 3.81e-27 108
Msa0594550 MtrunA17_Chr3g0133601 50.980 102 48 2 12 113 37 136 7.02e-27 105
Msa0594550 MtrunA17_Chr6g0452271 44.000 125 66 3 6 127 8 131 8.82e-27 107
Msa0594550 MtrunA17_Chr6g0454921 55.208 96 41 2 12 107 15 108 1.16e-26 103
Msa0594550 MtrunA17_Chr4g0068061 43.269 104 58 1 10 113 12 114 2.05e-26 106
Msa0594550 MtrunA17_Chr4g0055981 40.000 120 71 1 10 129 55 173 2.05e-26 103
Msa0594550 MtrunA17_Chr4g0054391 38.509 161 84 5 6 165 8 154 2.25e-26 105
Msa0594550 MtrunA17_Chr4g0057031 47.115 104 54 1 10 113 12 114 2.40e-26 104
Msa0594550 MtrunA17_Chr1g0194951 46.154 104 55 1 10 113 12 114 2.53e-26 106
Msa0594550 MtrunA17_Chr5g0400821 46.789 109 56 2 6 113 8 115 3.22e-26 105
Msa0594550 MtrunA17_Chr7g0275911 41.667 108 62 1 10 117 12 118 7.56e-26 102
Msa0594550 MtrunA17_Chr3g0135311 44.954 109 58 2 6 113 8 115 9.64e-26 104
Msa0594550 MtrunA17_Chr3g0121241 42.373 118 64 2 10 124 42 158 1.41e-25 103
Msa0594550 MtrunA17_Chr7g0228891 45.192 104 56 1 10 113 12 114 2.21e-25 102
Msa0594550 MtrunA17_Chr4g0068921 42.991 107 60 1 10 116 24 129 8.48e-25 98.6
Msa0594550 MtrunA17_Chr6g0487491 42.735 117 57 3 6 113 8 123 1.16e-24 100
Msa0594550 MtrunA17_Chr8g0343831 45.000 100 54 1 10 109 8 106 2.12e-24 99.0
Msa0594550 MtrunA17_Chr4g0070611 36.220 127 76 2 10 132 12 137 2.38e-24 100
Msa0594550 MtrunA17_Chr4g0072751 45.714 105 55 2 6 109 8 111 2.99e-24 100
Msa0594550 MtrunA17_Chr1g0157731 45.872 109 57 2 10 118 89 195 3.83e-24 102
Msa0594550 MtrunA17_Chr4g0070641 42.000 100 57 1 10 109 12 110 4.10e-24 96.3
Msa0594550 MtrunA17_Chr2g0293911 42.991 107 60 1 10 116 24 129 5.37e-24 99.4
Msa0594550 MtrunA17_Chr3g0139671 45.794 107 56 2 12 118 85 189 8.88e-24 101
Msa0594550 MtrunA17_Chr8g0360111 45.098 102 55 1 8 109 23 123 1.09e-23 97.4
Msa0594550 MtrunA17_Chr5g0429661 45.098 102 54 2 12 113 122 221 1.73e-23 98.6
Msa0594550 MtrunA17_Chr7g0269831 48.148 108 55 1 6 113 8 114 2.78e-23 97.8
Msa0594550 MtrunA17_Chr4g0058991 44.444 108 58 2 6 113 203 308 3.62e-23 98.6
Msa0594550 MtrunA17_Chr7g0238631 48.077 104 52 2 10 113 111 212 6.25e-23 98.6
Msa0594550 MtrunA17_Chr5g0437321 48.077 104 52 2 6 109 13 114 7.51e-23 95.5
Msa0594550 MtrunA17_Chr4g0042611 48.780 82 41 1 6 87 8 88 1.56e-22 89.4
Msa0594550 MtrunA17_Chr7g0240821 35.333 150 77 2 14 144 5 153 2.59e-22 92.8
Msa0594550 MtrunA17_Chr5g0434931 42.609 115 63 3 1 114 27 139 3.35e-22 93.6
Msa0594550 MtrunA17_Chr7g0228531 44.231 104 55 2 10 113 218 318 5.74e-22 95.1
Msa0594550 MtrunA17_Chr7g0247131 40.000 130 71 4 42 166 11 138 7.41e-22 92.4
Msa0594550 MtrunA17_Chr3g0117511 44.118 102 55 2 12 113 183 282 1.51e-21 94.0
Msa0594550 MtrunA17_Chr5g0434911 42.609 115 63 3 1 114 13 125 1.77e-21 91.7
Msa0594550 MtrunA17_Chr7g0220341 44.660 103 54 2 10 110 25 126 2.11e-21 91.3
Msa0594550 MtrunA17_Chr7g0228991 43.000 100 56 1 10 109 29 127 3.16e-21 90.9
Msa0594550 MtrunA17_Chr6g0480581 44.762 105 56 2 12 116 4 106 3.32e-21 90.1
Msa0594550 MtrunA17_Chr5g0395221 53.846 78 35 1 10 87 12 88 3.58e-21 85.9
Msa0594550 MtrunA17_Chr5g0434831 43.396 106 58 2 4 109 2 105 1.47e-20 87.0
Msa0594550 MtrunA17_Chr7g0228481 38.393 112 66 2 1 112 209 317 5.18e-20 89.4
Msa0594550 MtrunA17_Chr5g0417621 41.085 129 60 4 12 126 134 260 8.27e-20 89.0
Msa0594550 MtrunA17_Chr5g0434841 40.678 118 66 3 1 116 12 127 1.10e-19 87.4
Msa0594550 MtrunA17_Chr4g0042501 43.590 117 61 3 3 116 93 207 2.07e-19 87.8
Msa0594550 MtrunA17_Chr8g0342511 50.649 77 37 1 10 86 12 87 2.65e-19 81.3
Msa0594550 MtrunA17_Chr8g0342531 49.367 79 39 1 10 88 12 89 3.14e-19 82.8
Msa0594550 MtrunA17_Chr7g0228401 32.222 180 110 6 23 201 290 458 7.08e-19 86.7
Msa0594550 MtrunA17_Chr8g0342461 50.000 80 38 2 10 88 12 90 9.64e-19 80.9
Msa0594550 MtrunA17_Chr8g0342471 48.750 80 39 2 10 88 12 90 2.87e-18 79.7
Msa0594550 MtrunA17_Chr7g0238651 41.346 104 58 2 15 116 10 112 3.00e-18 84.0
Msa0594550 MtrunA17_Chr5g0397841 30.400 250 129 9 10 216 108 355 4.52e-18 84.0
Msa0594550 MtrunA17_Chr5g0425591 48.193 83 41 2 11 92 10 91 6.31e-18 77.4
Msa0594550 MtrunA17_Chr6g0460671 40.000 105 61 2 12 116 99 201 8.01e-18 82.4
Msa0594550 MtrunA17_Chr2g0323321 41.860 86 49 1 10 95 11 95 1.05e-17 77.4
Msa0594550 MtrunA17_Chr6g0460661 39.048 105 62 2 12 116 16 118 1.16e-17 78.6
Msa0594550 MtrunA17_Chr6g0453751 46.739 92 39 3 10 92 20 110 1.53e-17 77.4
Msa0594550 MtrunA17_Chr3g0125801 40.945 127 73 2 12 138 16 140 1.60e-17 80.9
Msa0594550 MtrunA17_Chr7g0233061 32.667 150 85 5 12 157 180 317 3.50e-17 80.9
Msa0594550 MtrunA17_Chr7g0254261 44.643 112 57 3 8 116 82 191 3.81e-17 80.5
Msa0594550 MtrunA17_Chr1g0177901 28.571 217 142 8 22 234 4 211 1.18e-16 77.0
Msa0594550 MtrunA17_Chr8g0362231 37.864 103 62 2 15 117 25 125 2.88e-16 78.6
Msa0594550 MtrunA17_Chr5g0416341 39.394 99 58 2 15 113 29 125 2.88e-15 75.9
Msa0594550 MtrunA17_Chr2g0294811 40.244 82 48 1 6 87 8 88 1.07e-14 69.3
Msa0594550 MtrunA17_Chr5g0434901 46.667 75 35 2 35 109 2 71 1.07e-13 66.6
Msa0594550 MtrunA17_Chr3g0093811 45.714 70 37 1 44 113 16 84 1.60e-13 69.3
Msa0594550 MtrunA17_Chr7g0229131 44.286 70 38 1 44 113 6 74 2.53e-13 67.0
Msa0594550 MtrunA17_Chr7g0229101 46.377 69 36 1 44 112 6 73 1.07e-12 65.9
Msa0594550 MtrunA17_Chr3g0104501 50.000 66 32 1 12 77 133 197 3.03e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0594550 AT3G60460.1 40.850 306 146 5 4 292 5 292 7.08e-62 198
Msa0594550 AT5G06100.1 54.206 107 48 1 10 116 32 137 5.16e-37 137
Msa0594550 AT4G26930.1 51.613 124 57 3 10 132 19 140 5.16e-37 136
Msa0594550 AT5G06100.5 54.206 107 48 1 10 116 32 137 1.85e-36 136
Msa0594550 AT5G06100.2 54.206 107 48 1 10 116 32 137 1.85e-36 136
Msa0594550 AT5G06100.3 54.206 107 48 1 10 116 32 137 1.85e-36 136
Msa0594550 AT5G06100.4 54.206 107 48 1 10 116 32 137 1.85e-36 136
Msa0594550 AT3G11440.2 51.351 111 53 1 6 116 37 146 2.80e-36 135
Msa0594550 AT3G11440.3 51.351 111 53 1 6 116 37 146 1.33e-35 134
Msa0594550 AT3G11440.4 51.351 111 53 1 6 116 37 146 1.33e-35 134
Msa0594550 AT3G11440.1 51.351 111 53 1 6 116 37 146 1.33e-35 134
Msa0594550 AT5G55020.1 52.336 107 50 1 10 116 26 131 9.52e-35 132
Msa0594550 AT2G32460.2 44.203 138 70 4 7 143 4 135 2.11e-34 130
Msa0594550 AT2G32460.1 43.704 135 70 3 10 143 18 147 2.47e-34 130
Msa0594550 AT2G26960.1 53.333 105 48 1 12 116 22 125 1.31e-33 127
Msa0594550 AT3G27810.1 37.500 168 99 3 10 174 20 184 1.42e-32 120
Msa0594550 AT1G34670.1 50.962 104 50 1 10 113 12 114 1.55e-32 123
Msa0594550 AT3G13890.2 54.808 104 46 1 10 113 12 114 2.03e-32 123
Msa0594550 AT4G28110.1 47.541 122 60 3 6 124 8 128 2.72e-32 121
Msa0594550 AT4G21440.1 50.000 112 54 2 6 116 8 118 2.75e-32 122
Msa0594550 AT4G01680.3 53.271 107 49 1 10 116 12 117 4.64e-32 119
Msa0594550 AT5G65230.1 50.962 104 50 1 10 113 12 114 5.91e-32 120
Msa0594550 AT5G15310.4 50.000 104 51 1 10 113 12 114 1.10e-31 118
Msa0594550 AT4G01680.1 53.271 107 49 1 10 116 12 117 1.20e-31 120
Msa0594550 AT5G26660.1 53.271 107 49 1 10 116 12 117 1.25e-31 120
Msa0594550 AT3G01530.1 42.063 126 69 2 6 131 21 142 1.68e-31 117
Msa0594550 AT3G30210.1 36.207 174 89 4 11 167 28 196 1.80e-31 119
Msa0594550 AT1G57560.2 44.776 134 70 3 10 140 12 144 2.46e-31 118
Msa0594550 AT3G12720.1 47.967 123 63 1 10 132 22 143 3.10e-31 119
Msa0594550 AT5G54230.1 50.000 104 51 1 10 113 12 114 3.43e-31 119
Msa0594550 AT5G15310.1 50.000 104 51 1 10 113 12 114 3.68e-31 119
Msa0594550 AT5G15310.2 50.000 104 51 1 10 113 12 114 3.82e-31 119
Msa0594550 AT1G63910.1 50.467 107 52 1 10 116 12 117 4.45e-31 119
Msa0594550 AT1G74650.1 48.148 108 55 1 6 113 8 114 4.82e-31 119
Msa0594550 AT3G61250.1 48.305 118 57 2 10 124 12 128 5.30e-31 118
Msa0594550 AT3G28910.1 46.296 108 57 1 6 113 8 114 5.32e-31 118
Msa0594550 AT1G57560.1 46.212 132 67 3 10 138 12 142 6.17e-31 118
Msa0594550 AT1G08810.1 50.962 104 50 1 10 113 12 114 6.25e-31 117
Msa0594550 AT3G02940.2 49.057 106 52 2 10 114 12 116 7.10e-31 118
Msa0594550 AT5G59780.3 48.696 115 56 2 11 123 9 122 7.89e-31 115
Msa0594550 AT3G50060.1 57.843 102 41 2 12 113 6 105 1.03e-30 117
Msa0594550 AT3G01140.2 47.222 108 56 1 6 113 8 114 1.06e-30 118
Msa0594550 AT4G05100.1 50.000 106 51 2 10 114 13 117 1.06e-30 117
Msa0594550 AT3G02940.1 49.057 106 52 2 10 114 12 116 1.07e-30 117
Msa0594550 AT3G02940.3 49.057 106 52 2 10 114 12 116 1.07e-30 117
Msa0594550 AT3G46130.1 49.565 115 55 2 11 123 10 123 1.12e-30 116
Msa0594550 AT5G62470.2 47.222 108 56 1 6 113 8 114 1.24e-30 118
Msa0594550 AT3G47600.1 48.077 104 53 1 10 113 12 114 1.33e-30 117
Msa0594550 AT1G79180.1 47.458 118 60 2 10 126 14 130 1.34e-30 117
Msa0594550 AT3G01140.1 47.222 108 56 1 6 113 51 157 1.65e-30 118
Msa0594550 AT1G09540.1 52.885 104 48 1 10 113 12 114 1.99e-30 118
Msa0594550 AT1G16490.1 50.962 104 50 1 10 113 14 116 2.14e-30 115
Msa0594550 AT4G09460.1 42.754 138 74 4 6 142 8 141 3.01e-30 114
Msa0594550 AT5G16770.4 49.057 106 52 2 10 114 12 116 3.38e-30 116
Msa0594550 AT5G16770.3 49.057 106 52 2 10 114 12 116 3.38e-30 116
Msa0594550 AT1G48000.1 38.411 151 90 2 10 160 32 179 3.44e-30 114
Msa0594550 AT5G16770.1 49.057 106 52 2 10 114 12 116 3.95e-30 116
Msa0594550 AT5G16770.2 49.057 106 52 2 10 114 12 116 3.95e-30 116
Msa0594550 AT2G47190.1 45.370 108 58 1 10 117 20 126 4.39e-30 115
Msa0594550 AT3G13890.1 50.442 113 46 2 10 113 12 123 4.44e-30 117
Msa0594550 AT5G40350.1 45.192 104 56 1 10 113 17 119 4.53e-30 113
Msa0594550 AT1G56160.1 35.838 173 106 3 6 174 10 181 1.37e-29 114
Msa0594550 AT4G34990.1 36.686 169 91 2 6 159 8 175 1.65e-29 113
Msa0594550 AT2G31180.1 44.248 113 61 2 6 117 8 119 1.86e-29 112
Msa0594550 AT5G10280.1 49.038 104 52 1 10 113 12 114 2.05e-29 114
Msa0594550 AT3G24310.1 42.748 131 67 3 6 136 15 137 2.23e-29 113
Msa0594550 AT3G55730.1 56.863 102 42 2 12 113 56 155 2.43e-29 115
Msa0594550 AT5G62470.1 47.222 108 55 2 6 113 8 113 2.70e-29 114
Msa0594550 AT5G67300.1 55.140 107 46 2 12 118 6 110 2.99e-29 113
Msa0594550 AT1G22640.1 33.898 236 126 7 6 224 8 230 3.31e-29 112
Msa0594550 AT5G61420.2 34.010 197 104 5 10 201 12 187 3.46e-29 114
Msa0594550 AT1G35515.1 48.624 109 53 3 6 113 8 114 3.73e-29 110
Msa0594550 AT3G48920.1 52.427 103 48 1 11 113 19 120 4.32e-29 112
Msa0594550 AT3G23250.1 41.221 131 75 2 6 135 8 137 4.39e-29 112
Msa0594550 AT4G38620.1 36.111 180 100 5 6 175 8 182 6.72e-29 112
Msa0594550 AT1G18570.1 44.203 138 69 4 10 147 13 142 7.80e-29 113
Msa0594550 AT5G07690.1 46.667 105 55 1 10 114 12 115 9.51e-29 112
Msa0594550 AT5G60890.1 50.000 104 51 1 10 113 12 114 1.10e-28 112
Msa0594550 AT3G53200.1 48.673 113 55 2 10 120 9 120 1.20e-28 110
Msa0594550 AT4G37780.1 42.963 135 62 3 10 143 12 132 1.38e-28 111
Msa0594550 AT2G16720.1 37.736 159 86 6 6 163 8 154 1.66e-28 110
Msa0594550 AT4G01680.2 48.739 119 48 3 10 116 12 129 1.78e-28 112
Msa0594550 AT5G23000.1 50.467 107 50 3 10 114 12 117 2.15e-28 111
Msa0594550 AT5G57620.1 48.624 109 54 2 6 113 8 115 2.16e-28 112
Msa0594550 AT4G13480.1 47.573 103 53 1 11 113 7 108 2.39e-28 110
Msa0594550 AT4G37260.1 53.922 102 45 2 12 113 13 112 3.98e-28 110
Msa0594550 AT2G47460.1 44.915 118 64 1 6 123 8 124 4.13e-28 111
Msa0594550 AT5G07700.1 48.077 104 53 1 10 113 12 114 4.14e-28 111
Msa0594550 AT5G07700.2 48.077 104 53 1 10 113 12 114 4.14e-28 111
Msa0594550 AT4G17785.2 48.077 104 53 1 10 113 13 115 4.50e-28 111
Msa0594550 AT4G17785.1 48.077 104 53 1 10 113 13 115 5.73e-28 111
Msa0594550 AT1G18710.1 44.262 122 64 3 10 128 12 132 8.24e-28 108
Msa0594550 AT3G12820.1 48.148 108 55 1 6 113 10 116 9.01e-28 108
Msa0594550 AT1G66230.1 45.968 124 63 2 10 130 12 134 9.37e-28 108
Msa0594550 AT1G06180.1 45.370 108 58 1 6 113 8 114 1.01e-27 108
Msa0594550 AT2G23290.1 53.922 102 45 2 12 113 13 112 1.21e-27 109
Msa0594550 AT5G49330.1 47.115 104 54 1 10 113 12 114 1.74e-27 109
Msa0594550 AT5G56110.1 46.296 108 57 1 6 113 8 114 2.30e-27 108
Msa0594550 AT1G68320.1 42.056 107 61 1 10 116 19 124 2.88e-27 107
Msa0594550 AT1G25340.1 43.396 106 59 1 11 116 19 123 3.24e-27 107
Msa0594550 AT5G16600.1 46.341 123 62 2 10 129 12 133 3.75e-27 108
Msa0594550 AT5G14340.1 42.982 114 64 1 10 123 24 136 5.95e-27 106
Msa0594550 AT3G08500.1 50.000 104 51 1 10 113 30 132 6.45e-27 108
Msa0594550 AT2G36890.1 44.037 109 59 2 6 113 8 115 6.57e-27 107
Msa0594550 AT5G12870.1 48.148 108 54 2 10 116 18 124 6.99e-27 106
Msa0594550 AT4G22680.1 49.038 104 52 1 10 113 12 114 8.42e-27 106
Msa0594550 AT3G13540.1 42.063 126 69 3 10 132 23 147 9.90e-27 105
Msa0594550 AT2G36890.2 44.037 109 59 2 6 113 49 156 1.12e-26 107
Msa0594550 AT4G25560.1 48.544 103 52 1 11 113 11 112 1.29e-26 105
Msa0594550 AT5G52600.1 45.370 108 58 1 2 109 4 110 1.67e-26 103
Msa0594550 AT3G28470.1 49.038 104 52 1 6 109 8 110 1.68e-26 106
Msa0594550 AT3G49690.1 46.552 116 60 2 6 120 8 122 1.76e-26 106
Msa0594550 AT4G18770.1 40.940 149 84 4 3 149 208 354 2.12e-26 107
Msa0594550 AT1G74430.1 43.333 120 64 3 10 126 12 130 2.65e-26 105
Msa0594550 AT5G14750.1 48.000 100 51 1 11 110 17 115 3.19e-26 102
Msa0594550 AT4G12350.1 45.902 122 60 3 10 127 12 131 4.00e-26 104
Msa0594550 AT2G26950.1 45.192 104 56 1 12 115 18 120 4.96e-26 106
Msa0594550 AT3G62610.1 43.220 118 66 1 6 123 8 124 5.30e-26 105
Msa0594550 AT5G40330.1 44.545 110 60 1 1 110 3 111 7.59e-26 102
Msa0594550 AT5G35550.1 42.063 126 67 3 7 131 11 131 9.41e-26 103
Msa0594550 AT5G65790.1 45.690 116 61 2 6 120 8 122 1.13e-25 105
Msa0594550 AT1G79180.2 37.179 156 61 4 6 126 10 163 1.17e-25 104
Msa0594550 AT1G74080.1 46.154 104 55 1 10 113 12 114 1.28e-25 104
Msa0594550 AT2G39880.1 51.961 102 47 2 12 113 50 149 1.29e-25 105
Msa0594550 AT3G27920.1 47.000 100 52 1 11 110 15 113 5.56e-25 100
Msa0594550 AT5G11050.1 43.697 119 63 3 10 126 103 219 8.19e-25 103
Msa0594550 AT1G25340.2 42.453 106 55 2 11 116 19 118 1.34e-24 100
Msa0594550 AT5G52260.1 47.009 117 60 2 11 126 13 128 1.72e-24 100
Msa0594550 AT3G09230.1 50.000 102 49 2 12 113 55 154 2.28e-24 102
Msa0594550 AT1G25340.3 42.453 106 55 2 11 116 19 118 3.02e-24 100
Msa0594550 AT5G62320.1 45.946 111 52 2 10 113 13 122 4.35e-24 98.6
Msa0594550 AT3G06490.1 45.794 107 57 1 10 116 19 124 1.04e-23 99.0
Msa0594550 AT5G49620.1 46.154 104 55 1 10 113 26 128 1.17e-23 98.6
Msa0594550 AT5G58850.1 45.946 111 56 3 12 120 105 213 2.05e-23 99.8
Msa0594550 AT5G02320.1 44.628 121 62 3 10 127 125 243 4.59e-23 99.4
Msa0594550 AT5G02320.2 44.628 121 62 3 10 127 125 243 4.59e-23 99.4
Msa0594550 AT5G02320.3 44.628 121 62 3 10 127 65 183 4.67e-23 99.0
Msa0594550 AT3G27810.2 38.806 134 76 3 44 174 5 135 7.40e-23 93.2
Msa0594550 AT5G40360.1 42.727 110 61 2 6 115 152 259 7.69e-23 97.1
Msa0594550 AT4G32730.5 44.545 110 58 3 10 118 85 192 2.43e-22 97.4
Msa0594550 AT4G32730.4 44.545 110 58 3 10 118 85 192 2.43e-22 97.4
Msa0594550 AT4G32730.3 44.545 110 58 3 10 118 85 192 2.43e-22 97.4
Msa0594550 AT4G32730.2 44.545 110 58 3 10 118 85 192 2.43e-22 97.4
Msa0594550 AT4G32730.1 44.545 110 58 3 10 118 85 192 2.81e-22 97.4
Msa0594550 AT3G46130.3 52.874 87 38 2 39 123 6 91 3.22e-22 92.8
Msa0594550 AT5G59780.2 54.878 82 34 2 44 123 21 101 3.89e-22 92.4
Msa0594550 AT5G26660.2 58.904 73 29 1 44 116 15 86 4.08e-22 94.7
Msa0594550 AT1G66370.1 40.769 130 67 3 10 130 8 136 4.34e-22 93.2
Msa0594550 AT3G09370.1 45.794 107 56 2 12 118 130 234 5.62e-22 95.9
Msa0594550 AT3G09370.2 45.794 107 56 2 12 118 135 239 5.66e-22 95.9
Msa0594550 AT3G46130.4 54.878 82 34 2 44 123 21 101 6.14e-22 92.4
Msa0594550 AT3G09370.3 45.794 107 56 2 12 118 143 247 7.29e-22 95.9
Msa0594550 AT5G11510.3 41.284 109 62 2 10 118 79 185 8.56e-22 95.9
Msa0594550 AT5G11510.1 41.284 109 62 2 10 118 79 185 8.56e-22 95.9
Msa0594550 AT5G11510.4 41.284 109 62 2 10 118 79 185 8.56e-22 95.9
Msa0594550 AT5G11510.2 41.284 109 62 2 10 118 79 185 1.01e-21 95.5
Msa0594550 AT5G11510.5 41.284 109 62 2 10 118 79 185 1.05e-21 95.5
Msa0594550 AT3G27785.1 41.667 108 61 2 6 113 183 288 1.47e-21 94.4
Msa0594550 AT1G66380.1 45.000 100 54 1 10 109 8 106 1.77e-21 88.6
Msa0594550 AT3G29020.1 46.875 96 49 2 12 107 65 158 2.33e-21 90.9
Msa0594550 AT3G29020.2 44.762 105 56 2 12 116 67 169 3.25e-21 91.7
Msa0594550 AT1G56650.1 45.000 100 54 1 10 109 8 106 5.95e-21 90.1
Msa0594550 AT5G40350.2 51.429 70 33 1 44 113 6 74 3.11e-20 86.3
Msa0594550 AT5G49620.2 40.678 118 55 2 10 113 26 142 3.55e-20 89.4
Msa0594550 AT3G53200.2 53.165 79 34 2 44 120 10 87 9.47e-20 85.9
Msa0594550 AT1G69560.1 44.554 101 54 2 7 107 102 200 1.05e-19 88.2
Msa0594550 AT1G69560.2 44.554 101 54 2 7 107 118 216 1.17e-19 88.2
Msa0594550 AT5G17800.1 35.976 164 90 4 12 162 93 254 1.87e-19 87.0
Msa0594550 AT4G33450.1 41.935 124 65 4 11 131 18 137 2.10e-19 85.9
Msa0594550 AT1G26780.1 39.683 126 61 3 10 122 96 219 2.16e-19 86.3
Msa0594550 AT1G26780.2 39.683 126 61 3 10 122 96 219 2.19e-19 87.4
Msa0594550 AT1G66390.1 42.574 101 57 1 10 110 8 107 2.50e-19 85.5
Msa0594550 AT3G12820.2 55.882 68 29 1 46 113 2 68 2.74e-19 84.0
Msa0594550 AT2G25230.1 38.793 116 67 4 10 124 24 136 4.53e-19 84.7
Msa0594550 AT3G47600.2 43.299 97 53 2 44 139 40 135 4.90e-19 86.3
Msa0594550 AT1G17950.1 43.810 105 54 3 12 113 5 107 7.22e-19 84.3
Msa0594550 AT5G35550.2 49.438 89 39 3 44 131 51 134 6.32e-18 82.0
Msa0594550 AT4G00540.2 45.045 111 55 4 10 116 101 209 7.99e-18 83.6
Msa0594550 AT4G00540.1 45.045 111 55 4 10 116 99 207 1.53e-17 82.8
Msa0594550 AT2G37630.1 41.346 104 58 2 15 116 7 109 4.14e-17 80.9
Msa0594550 AT5G39700.1 38.793 116 69 2 1 116 45 158 5.29e-17 77.8
Msa0594550 AT1G73410.1 44.762 105 53 3 12 113 6 108 6.40e-17 79.0
Msa0594550 AT1G73410.2 44.762 105 53 3 12 113 6 108 6.58e-17 77.8
Msa0594550 AT5G14750.3 52.308 65 30 1 46 110 18 81 2.76e-16 75.5
Msa0594550 AT5G40430.1 37.500 112 67 3 10 121 52 160 6.85e-16 76.3
Msa0594550 AT2G02820.2 37.864 103 62 2 15 117 33 133 2.83e-14 73.2
Msa0594550 AT1G14350.2 36.449 107 66 2 15 121 28 132 3.22e-14 72.8
Msa0594550 AT1G14350.1 36.449 107 66 2 15 121 28 132 3.22e-14 72.8
Msa0594550 AT2G02820.1 37.864 103 62 2 15 117 33 133 3.52e-14 72.8
Msa0594550 AT2G02820.3 34.921 126 66 3 15 140 33 142 3.74e-14 72.0
Msa0594550 AT1G66380.3 51.515 66 31 1 44 109 9 73 7.91e-13 64.3
Msa0594550 AT1G66380.2 36.735 98 60 2 10 106 8 104 1.78e-12 63.2
Msa0594550 AT3G23250.2 40.741 81 46 2 56 135 1 80 5.69e-12 64.7
Msa0594550 AT1G22640.3 34.483 145 77 5 56 184 1 143 2.05e-11 62.4
Msa0594550 AT3G18100.4 38.144 97 58 2 11 107 384 478 4.19e-11 63.9
Msa0594550 AT3G18100.1 38.144 97 58 2 11 107 545 639 4.32e-11 63.9
Msa0594550 AT3G18100.2 38.144 97 58 2 11 107 332 426 4.70e-11 63.5
Msa0594550 AT3G18100.3 38.144 97 58 2 11 107 497 591 4.92e-11 63.9
Msa0594550 AT5G59780.1 48.148 54 26 1 72 123 4 57 6.39e-11 60.5

Find 69 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCAAATATGTAGCAATTT+TGG 0.139113 4_2:-22537274 None:intergenic
GGCCAAAATTGCTACATATT+TGG 0.140847 4_2:+22537272 Msa0594550:CDS
TCAAACATGTCCATAAAATT+AGG 0.151561 4_2:-22538062 None:intergenic
TACTTACCCAACTTCTTATA+TGG 0.155167 4_2:+22537812 Msa0594550:CDS
ATTGAACTACAGGGGCAATT+TGG 0.221200 4_2:+22537240 Msa0594550:CDS
TAAGTTCACTTTCCAAATTT+TGG 0.233054 4_2:-22537890 None:intergenic
TTTGGAGTAGCAGGAGAAAA+AGG 0.243245 4_2:+22537325 Msa0594550:CDS
AAGTTCAAACTGCTTCTTTC+AGG 0.248528 4_2:+22538172 Msa0594550:CDS
TTGTGTTTCTGCTGCTTTGA+TGG 0.256433 4_2:-22537381 None:intergenic
AAAGCCAAACTACCAAAATT+TGG 0.257129 4_2:+22537878 Msa0594550:CDS
GGAAAGTCCATCTGTGATTC+AGG 0.284117 4_2:-22537996 None:intergenic
TTGAAACATGTTAACAAATA+TGG 0.313597 4_2:+22536303 Msa0594550:CDS
AATTTGGAAAGTGAACTTAA+TGG 0.324796 4_2:+22537894 Msa0594550:CDS
TAGTTTGGCTTTGTCAAATC+TGG 0.330481 4_2:-22537867 None:intergenic
AGCTGATTGGAACCACTTTC+AGG 0.336419 4_2:-22537777 None:intergenic
TTGAACTACAGGGGCAATTT+GGG 0.339082 4_2:+22537241 Msa0594550:CDS
CAAACATGTCCATAAAATTA+GGG 0.375324 4_2:-22538061 None:intergenic
AGGGGCAATTTGGGAACAAA+TGG 0.384910 4_2:+22537250 Msa0594550:CDS
CAAGAACTGGAAAATCTTGC+CGG 0.387798 4_2:+22536367 Msa0594550:CDS
GCTTATTAACCCATCTTAAC+CGG 0.388019 4_2:-22536386 None:intergenic
GAAAATCTTGCCGGTTAAGA+TGG 0.388049 4_2:+22536376 Msa0594550:CDS
ACTTACCCAACTTCTTATAT+GGG 0.406058 4_2:+22537813 Msa0594550:CDS
TGCTGCTTTGATGGTGGTGA+TGG 0.407537 4_2:-22537372 None:intergenic
ACAAATATGGTCCTAGAGAT+TGG 0.416347 4_2:+22536316 Msa0594550:CDS
GTCCATAAAATTAGGGTCAA+AGG 0.419346 4_2:-22538054 None:intergenic
AAGGGTGGTAATTGAACTAC+AGG 0.432691 4_2:+22537230 Msa0594550:CDS
TAATGGAATTATTGAGTTTG+AGG 0.433166 4_2:+22537911 Msa0594550:CDS
TTGCCAAGTCTTGGACTTGA+AGG 0.435753 4_2:+22538134 Msa0594550:CDS
TGAACAAGGTCTTGGCACTC+TGG 0.436596 4_2:-22538026 None:intergenic
TGTTTCCCATATAAGAAGTT+GGG 0.440519 4_2:-22537818 None:intergenic
TCTTGGCACTCTGGGAATAG+TGG 0.453927 4_2:-22538017 None:intergenic
TAATCAAGTAAAAGTTGAAA+AGG 0.453950 4_2:+22537419 Msa0594550:CDS
TTGTTTCCCATATAAGAAGT+TGG 0.464251 4_2:-22537819 None:intergenic
GATGGTGGTGATGGTGTCCT+TGG 0.466017 4_2:-22537363 None:intergenic
GGAACTAGGTTGCCAAGTCT+TGG 0.466768 4_2:+22538125 Msa0594550:CDS
TCCATAAAATTAGGGTCAAA+GGG 0.467923 4_2:-22538053 None:intergenic
TGGAGCTCCATTCGATCAAA+AGG 0.474270 4_2:+22536336 Msa0594550:CDS
TGAAAGTGGTTCCAATCAGC+TGG 0.487595 4_2:+22537779 Msa0594550:CDS
TTCATTAGAGGAAGAAAGGG+TGG 0.494518 4_2:+22537215 Msa0594550:CDS
AGGGATCTTGAACAAGGTCT+TGG 0.494997 4_2:-22538034 None:intergenic
AGTGTTTGGAGCAAGAAGAA+TGG 0.502724 4_2:+22538104 Msa0594550:CDS
ATCTGTGATTCAGGGAGTAA+TGG 0.504206 4_2:-22537987 None:intergenic
GAACAAGGTCTTGGCACTCT+GGG 0.512429 4_2:-22538025 None:intergenic
CGAATGGAGCTCCAATCTCT+AGG 0.517393 4_2:-22536327 None:intergenic
ATATTTCAGGTTCCTGAAAG+TGG 0.522244 4_2:+22537765 Msa0594550:intron
ATCAAAGCAGCAGAAACACA+AGG 0.531957 4_2:+22537383 Msa0594550:CDS
GGGGCAATTTGGGAACAAAT+GGG 0.537798 4_2:+22537251 Msa0594550:CDS
AAAATCTTGCCGGTTAAGAT+GGG 0.543105 4_2:+22536377 Msa0594550:CDS
AAAATTGCTACATATTTGGA+AGG 0.543315 4_2:+22537276 Msa0594550:CDS
TCATCTTCTTCACTACTCCA+TGG 0.545375 4_2:-22536273 None:intergenic
TGTTTCTGCTGCTTTGATGG+TGG 0.546809 4_2:-22537378 None:intergenic
TTTCCTTCAAGTCCAAGACT+TGG 0.558372 4_2:-22538137 None:intergenic
ATGGAAAGAGAATATGAAAG+AGG 0.565781 4_2:+22536234 Msa0594550:CDS
GGAGCAAGAAGAATGGAACT+AGG 0.574079 4_2:+22538111 Msa0594550:CDS
TTGGCTTTGTCAAATCTGGA+AGG 0.584704 4_2:-22537863 None:intergenic
TTCTTATATGGGAAACAAAG+AGG 0.593324 4_2:+22537824 Msa0594550:CDS
GAAAGTCCATCTGTGATTCA+GGG 0.593626 4_2:-22537995 None:intergenic
TGCTGATGACGACTCAAATG+AGG 0.603211 4_2:-22537955 None:intergenic
ATTACTCCCTGAATCACAGA+TGG 0.605254 4_2:+22537989 Msa0594550:CDS
GGATGGAGAGGAATTATCCA+AGG 0.606339 4_2:+22537346 Msa0594550:CDS
AATGAGGGTACTGTGTGAAG+TGG 0.635827 4_2:-22537939 None:intergenic
GCTGATGACGACTCAAATGA+GGG 0.643868 4_2:-22537954 None:intergenic
GGTCAAAGGGATCTTGAACA+AGG 0.656971 4_2:-22538040 None:intergenic
AAATTGCTACATATTTGGAA+GGG 0.659564 4_2:+22537277 Msa0594550:CDS
AAGTGGTTCCAATCAGCTGG+AGG 0.677910 4_2:+22537782 Msa0594550:CDS
TCAAAGCAGCAGAAACACAA+GGG 0.678275 4_2:+22537384 Msa0594550:CDS
GGGTACTGTGTGAAGTGGAG+TGG 0.686347 4_2:-22537934 None:intergenic
AGGGTGGTAATTGAACTACA+GGG 0.695175 4_2:+22537231 Msa0594550:CDS
GGGTGGTAATTGAACTACAG+GGG 0.716244 4_2:+22537232 Msa0594550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGAACAAAATTAAAATTA+GGG - chr4_2:22536450-22536469 None:intergenic 10.0%
!! TAATGAACAAAATTAAAATT+AGG - chr4_2:22536451-22536470 None:intergenic 10.0%
!! AATGAACAAAATTAAAATTA+GGG - chr4_2:22536450-22536469 None:intergenic 10.0%
!! TAATGAACAAAATTAAAATT+AGG - chr4_2:22536451-22536470 None:intergenic 10.0%
!! AAAACAAAACACAAATTAAA+CGG - chr4_2:22537147-22537166 None:intergenic 15.0%
!! ATGAATCATTTGATTAATAT+CGG + chr4_2:22537610-22537629 Msa0594550:intron 15.0%
!! AAAACAAAACACAAATTAAA+CGG - chr4_2:22537147-22537166 None:intergenic 15.0%
!! ATGAATCATTTGATTAATAT+CGG + chr4_2:22537610-22537629 Msa0594550:intron 15.0%
!! TTGAAACATGTTAACAAATA+TGG + chr4_2:22536303-22536322 Msa0594550:CDS 20.0%
!! TACACATAAAAAACAAAAAG+TGG - chr4_2:22536524-22536543 None:intergenic 20.0%
!!! AATGTGTTTGTGTTTTTTTA+CGG + chr4_2:22536543-22536562 Msa0594550:intron 20.0%
!!! TTCACAAACAGTTAATTTTT+GGG - chr4_2:22536908-22536927 None:intergenic 20.0%
!!! TTTCACAAACAGTTAATTTT+TGG - chr4_2:22536909-22536928 None:intergenic 20.0%
!!! TTGATTGTTTCTACTATTTA+TGG - chr4_2:22536985-22537004 None:intergenic 20.0%
!! TAATCAAGTAAAAGTTGAAA+AGG + chr4_2:22537419-22537438 Msa0594550:CDS 20.0%
!! TTGAAACATGTTAACAAATA+TGG + chr4_2:22536303-22536322 Msa0594550:CDS 20.0%
!! TACACATAAAAAACAAAAAG+TGG - chr4_2:22536524-22536543 None:intergenic 20.0%
!!! AATGTGTTTGTGTTTTTTTA+CGG + chr4_2:22536543-22536562 Msa0594550:intron 20.0%
!!! TTCACAAACAGTTAATTTTT+GGG - chr4_2:22536908-22536927 None:intergenic 20.0%
!!! TTTCACAAACAGTTAATTTT+TGG - chr4_2:22536909-22536928 None:intergenic 20.0%
!!! TTGATTGTTTCTACTATTTA+TGG - chr4_2:22536985-22537004 None:intergenic 20.0%
!! TAATCAAGTAAAAGTTGAAA+AGG + chr4_2:22537419-22537438 Msa0594550:CDS 20.0%
! GAAAGAGGTTACATAAAAAA+AGG + chr4_2:22536249-22536268 Msa0594550:CDS 25.0%
! TCATTAATTATTGCTACACT+TGG + chr4_2:22536465-22536484 Msa0594550:intron 25.0%
! ATACCACCAAAAATTTGAAA+GGG - chr4_2:22536658-22536677 None:intergenic 25.0%
! AATACCACCAAAAATTTGAA+AGG - chr4_2:22536659-22536678 None:intergenic 25.0%
! TGTTTGATTCAATACTTCAT+AGG + chr4_2:22536845-22536864 Msa0594550:intron 25.0%
!!! TTTGTTTTGTGATGAAAGTT+TGG + chr4_2:22537159-22537178 Msa0594550:intron 25.0%
!! TTCCAAATATGTAGCAATTT+TGG - chr4_2:22537277-22537296 None:intergenic 25.0%
! AAAATTGCTACATATTTGGA+AGG + chr4_2:22537276-22537295 Msa0594550:CDS 25.0%
! AAATTGCTACATATTTGGAA+GGG + chr4_2:22537277-22537296 Msa0594550:CDS 25.0%
!! ACAATGATGTGAAGAATTTT+TGG + chr4_2:22537307-22537326 Msa0594550:CDS 25.0%
!!! AAACGATAATTTTAGTGTGA+AGG + chr4_2:22537676-22537695 Msa0594550:intron 25.0%
!!! AACGATAATTTTAGTGTGAA+GGG + chr4_2:22537677-22537696 Msa0594550:intron 25.0%
! ACATGAAAGATTAGAAAGTA+TGG + chr4_2:22537724-22537743 Msa0594550:intron 25.0%
!! ATTAGAAAGTATGGACTTAA+TGG + chr4_2:22537733-22537752 Msa0594550:intron 25.0%
! ATGGTGAAAATGTATATTTC+AGG + chr4_2:22537752-22537771 Msa0594550:intron 25.0%
!! TAAGTTCACTTTCCAAATTT+TGG - chr4_2:22537893-22537912 None:intergenic 25.0%
! AATTTGGAAAGTGAACTTAA+TGG + chr4_2:22537894-22537913 Msa0594550:CDS 25.0%
! TAATGGAATTATTGAGTTTG+AGG + chr4_2:22537911-22537930 Msa0594550:CDS 25.0%
! CAAACATGTCCATAAAATTA+GGG - chr4_2:22538064-22538083 None:intergenic 25.0%
! TCAAACATGTCCATAAAATT+AGG - chr4_2:22538065-22538084 None:intergenic 25.0%
!!! AAAAATGTTCAGAAAGTGTT+TGG + chr4_2:22538090-22538109 Msa0594550:CDS 25.0%
! AGTATTCAAAAATCTCAGTT+GGG - chr4_2:22538202-22538221 None:intergenic 25.0%
! AAGTATTCAAAAATCTCAGT+TGG - chr4_2:22538203-22538222 None:intergenic 25.0%
! GAAAGAGGTTACATAAAAAA+AGG + chr4_2:22536249-22536268 Msa0594550:CDS 25.0%
! TCATTAATTATTGCTACACT+TGG + chr4_2:22536465-22536484 Msa0594550:intron 25.0%
! ATACCACCAAAAATTTGAAA+GGG - chr4_2:22536658-22536677 None:intergenic 25.0%
! AATACCACCAAAAATTTGAA+AGG - chr4_2:22536659-22536678 None:intergenic 25.0%
! TGTTTGATTCAATACTTCAT+AGG + chr4_2:22536845-22536864 Msa0594550:intron 25.0%
!!! TTTGTTTTGTGATGAAAGTT+TGG + chr4_2:22537159-22537178 Msa0594550:intron 25.0%
!! TTCCAAATATGTAGCAATTT+TGG - chr4_2:22537277-22537296 None:intergenic 25.0%
! AAAATTGCTACATATTTGGA+AGG + chr4_2:22537276-22537295 Msa0594550:CDS 25.0%
! AAATTGCTACATATTTGGAA+GGG + chr4_2:22537277-22537296 Msa0594550:CDS 25.0%
!! ACAATGATGTGAAGAATTTT+TGG + chr4_2:22537307-22537326 Msa0594550:CDS 25.0%
!!! AAACGATAATTTTAGTGTGA+AGG + chr4_2:22537676-22537695 Msa0594550:intron 25.0%
!!! AACGATAATTTTAGTGTGAA+GGG + chr4_2:22537677-22537696 Msa0594550:intron 25.0%
! ACATGAAAGATTAGAAAGTA+TGG + chr4_2:22537724-22537743 Msa0594550:intron 25.0%
!! ATTAGAAAGTATGGACTTAA+TGG + chr4_2:22537733-22537752 Msa0594550:intron 25.0%
! ATGGTGAAAATGTATATTTC+AGG + chr4_2:22537752-22537771 Msa0594550:intron 25.0%
!! TAAGTTCACTTTCCAAATTT+TGG - chr4_2:22537893-22537912 None:intergenic 25.0%
! AATTTGGAAAGTGAACTTAA+TGG + chr4_2:22537894-22537913 Msa0594550:CDS 25.0%
! TAATGGAATTATTGAGTTTG+AGG + chr4_2:22537911-22537930 Msa0594550:CDS 25.0%
! CAAACATGTCCATAAAATTA+GGG - chr4_2:22538064-22538083 None:intergenic 25.0%
! TCAAACATGTCCATAAAATT+AGG - chr4_2:22538065-22538084 None:intergenic 25.0%
!!! AAAAATGTTCAGAAAGTGTT+TGG + chr4_2:22538090-22538109 Msa0594550:CDS 25.0%
! AGTATTCAAAAATCTCAGTT+GGG - chr4_2:22538202-22538221 None:intergenic 25.0%
! AAGTATTCAAAAATCTCAGT+TGG - chr4_2:22538203-22538222 None:intergenic 25.0%
ATGGAAAGAGAATATGAAAG+AGG + chr4_2:22536234-22536253 Msa0594550:CDS 30.0%
GTTACATAAAAAAAGGACCA+TGG + chr4_2:22536256-22536275 Msa0594550:CDS 30.0%
!!! TGTTACTACGTTTTCAAGTT+GGG - chr4_2:22536417-22536436 None:intergenic 30.0%
!!! TTGTTACTACGTTTTCAAGT+TGG - chr4_2:22536418-22536437 None:intergenic 30.0%
! TTCACACCCTTTCAAATTTT+TGG + chr4_2:22536649-22536668 Msa0594550:intron 30.0%
!! CAAAAGTGTCACTGTTAAAT+AGG - chr4_2:22536714-22536733 None:intergenic 30.0%
! GTAATCACATGTATTGATGT+TGG - chr4_2:22536760-22536779 None:intergenic 30.0%
CTACACTAACACATTAACAT+CGG - chr4_2:22536814-22536833 None:intergenic 30.0%
! TACTTCATAGGTTGAAACAT+TGG + chr4_2:22536857-22536876 Msa0594550:intron 30.0%
!! TCTATGCATCTGTTTGATTT+TGG + chr4_2:22536947-22536966 Msa0594550:intron 30.0%
TGCTATTAATGTTCAAGTGT+TGG + chr4_2:22537092-22537111 Msa0594550:intron 30.0%
ATGTGTGATTTCAATTGTAG+AGG + chr4_2:22537183-22537202 Msa0594550:intron 30.0%
! AGTTTTCATTAGAGGAAGAA+AGG + chr4_2:22537211-22537230 Msa0594550:CDS 30.0%
! GTTTTCATTAGAGGAAGAAA+GGG + chr4_2:22537212-22537231 Msa0594550:CDS 30.0%
TTCTTTAAGCGAGTTATGTT+TGG + chr4_2:22537483-22537502 Msa0594550:intron 30.0%
TACTTACCCAACTTCTTATA+TGG + chr4_2:22537812-22537831 Msa0594550:CDS 30.0%
ACTTACCCAACTTCTTATAT+GGG + chr4_2:22537813-22537832 Msa0594550:CDS 30.0%
TGTTTCCCATATAAGAAGTT+GGG - chr4_2:22537821-22537840 None:intergenic 30.0%
TTGTTTCCCATATAAGAAGT+TGG - chr4_2:22537822-22537841 None:intergenic 30.0%
TTCTTATATGGGAAACAAAG+AGG + chr4_2:22537824-22537843 Msa0594550:CDS 30.0%
AAAGCCAAACTACCAAAATT+TGG + chr4_2:22537878-22537897 Msa0594550:CDS 30.0%
!! CTTTCCAAATTTTGGTAGTT+TGG - chr4_2:22537885-22537904 None:intergenic 30.0%
TCCATAAAATTAGGGTCAAA+GGG - chr4_2:22538056-22538075 None:intergenic 30.0%
ATGGAAAGAGAATATGAAAG+AGG + chr4_2:22536234-22536253 Msa0594550:CDS 30.0%
GTTACATAAAAAAAGGACCA+TGG + chr4_2:22536256-22536275 Msa0594550:CDS 30.0%
!!! TGTTACTACGTTTTCAAGTT+GGG - chr4_2:22536417-22536436 None:intergenic 30.0%
!!! TTGTTACTACGTTTTCAAGT+TGG - chr4_2:22536418-22536437 None:intergenic 30.0%
! TTCACACCCTTTCAAATTTT+TGG + chr4_2:22536649-22536668 Msa0594550:intron 30.0%
!! CAAAAGTGTCACTGTTAAAT+AGG - chr4_2:22536714-22536733 None:intergenic 30.0%
! GTAATCACATGTATTGATGT+TGG - chr4_2:22536760-22536779 None:intergenic 30.0%
CTACACTAACACATTAACAT+CGG - chr4_2:22536814-22536833 None:intergenic 30.0%
! TACTTCATAGGTTGAAACAT+TGG + chr4_2:22536857-22536876 Msa0594550:intron 30.0%
!! TCTATGCATCTGTTTGATTT+TGG + chr4_2:22536947-22536966 Msa0594550:intron 30.0%
TGCTATTAATGTTCAAGTGT+TGG + chr4_2:22537092-22537111 Msa0594550:intron 30.0%
ATGTGTGATTTCAATTGTAG+AGG + chr4_2:22537183-22537202 Msa0594550:intron 30.0%
! AGTTTTCATTAGAGGAAGAA+AGG + chr4_2:22537211-22537230 Msa0594550:CDS 30.0%
! GTTTTCATTAGAGGAAGAAA+GGG + chr4_2:22537212-22537231 Msa0594550:CDS 30.0%
TTCTTTAAGCGAGTTATGTT+TGG + chr4_2:22537483-22537502 Msa0594550:intron 30.0%
TACTTACCCAACTTCTTATA+TGG + chr4_2:22537812-22537831 Msa0594550:CDS 30.0%
ACTTACCCAACTTCTTATAT+GGG + chr4_2:22537813-22537832 Msa0594550:CDS 30.0%
TGTTTCCCATATAAGAAGTT+GGG - chr4_2:22537821-22537840 None:intergenic 30.0%
TTGTTTCCCATATAAGAAGT+TGG - chr4_2:22537822-22537841 None:intergenic 30.0%
TTCTTATATGGGAAACAAAG+AGG + chr4_2:22537824-22537843 Msa0594550:CDS 30.0%
AAAGCCAAACTACCAAAATT+TGG + chr4_2:22537878-22537897 Msa0594550:CDS 30.0%
!! CTTTCCAAATTTTGGTAGTT+TGG - chr4_2:22537885-22537904 None:intergenic 30.0%
TCCATAAAATTAGGGTCAAA+GGG - chr4_2:22538056-22538075 None:intergenic 30.0%
ACAAATATGGTCCTAGAGAT+TGG + chr4_2:22536316-22536335 Msa0594550:CDS 35.0%
! CAAAAGACCTTTTGATCGAA+TGG - chr4_2:22536346-22536365 None:intergenic 35.0%
! AAAATCTTGCCGGTTAAGAT+GGG + chr4_2:22536377-22536396 Msa0594550:CDS 35.0%
GCTTATTAACCCATCTTAAC+CGG - chr4_2:22536389-22536408 None:intergenic 35.0%
! AAGGGTGTGAAAAAAAGATC+AGG - chr4_2:22536640-22536659 None:intergenic 35.0%
!! ACACCCTTTCAAATTTTTGG+TGG + chr4_2:22536652-22536671 Msa0594550:intron 35.0%
! AGTGACACTTTTGATCGAAT+AGG + chr4_2:22536721-22536740 Msa0594550:intron 35.0%
! CTTTTGATCGAATAGGTGAT+TGG + chr4_2:22536728-22536747 Msa0594550:intron 35.0%
CTCTTGTTACGTTTATTGCA+AGG - chr4_2:22537048-22537067 None:intergenic 35.0%
! AGGATGCAAGTTTTCATTAG+AGG + chr4_2:22537203-22537222 Msa0594550:CDS 35.0%
GGCCAAAATTGCTACATATT+TGG + chr4_2:22537272-22537291 Msa0594550:CDS 35.0%
!!! TGAAGAATTTTTGGAGTAGC+AGG + chr4_2:22537316-22537335 Msa0594550:CDS 35.0%
! CTGAATTGTCCGATTTTGTT+CGG + chr4_2:22537536-22537555 Msa0594550:intron 35.0%
GTAGACTATCCGAACAAAAT+CGG - chr4_2:22537548-22537567 None:intergenic 35.0%
TGTGTGACAATATGAATGCA+AGG + chr4_2:22537643-22537662 Msa0594550:intron 35.0%
!! ATATTTCAGGTTCCTGAAAG+TGG + chr4_2:22537765-22537784 Msa0594550:intron 35.0%
!! TAGTTTGGCTTTGTCAAATC+TGG - chr4_2:22537870-22537889 None:intergenic 35.0%
! TCCCTTTGACCCTAATTTTA+TGG + chr4_2:22538052-22538071 Msa0594550:CDS 35.0%
GTCCATAAAATTAGGGTCAA+AGG - chr4_2:22538057-22538076 None:intergenic 35.0%
AAGTTCAAACTGCTTCTTTC+AGG + chr4_2:22538172-22538191 Msa0594550:CDS 35.0%
ACAAATATGGTCCTAGAGAT+TGG + chr4_2:22536316-22536335 Msa0594550:CDS 35.0%
! CAAAAGACCTTTTGATCGAA+TGG - chr4_2:22536346-22536365 None:intergenic 35.0%
! AAAATCTTGCCGGTTAAGAT+GGG + chr4_2:22536377-22536396 Msa0594550:CDS 35.0%
GCTTATTAACCCATCTTAAC+CGG - chr4_2:22536389-22536408 None:intergenic 35.0%
! AAGGGTGTGAAAAAAAGATC+AGG - chr4_2:22536640-22536659 None:intergenic 35.0%
!! ACACCCTTTCAAATTTTTGG+TGG + chr4_2:22536652-22536671 Msa0594550:intron 35.0%
! AGTGACACTTTTGATCGAAT+AGG + chr4_2:22536721-22536740 Msa0594550:intron 35.0%
! CTTTTGATCGAATAGGTGAT+TGG + chr4_2:22536728-22536747 Msa0594550:intron 35.0%
CTCTTGTTACGTTTATTGCA+AGG - chr4_2:22537048-22537067 None:intergenic 35.0%
! AGGATGCAAGTTTTCATTAG+AGG + chr4_2:22537203-22537222 Msa0594550:CDS 35.0%
GGCCAAAATTGCTACATATT+TGG + chr4_2:22537272-22537291 Msa0594550:CDS 35.0%
!!! TGAAGAATTTTTGGAGTAGC+AGG + chr4_2:22537316-22537335 Msa0594550:CDS 35.0%
! CTGAATTGTCCGATTTTGTT+CGG + chr4_2:22537536-22537555 Msa0594550:intron 35.0%
GTAGACTATCCGAACAAAAT+CGG - chr4_2:22537548-22537567 None:intergenic 35.0%
TGTGTGACAATATGAATGCA+AGG + chr4_2:22537643-22537662 Msa0594550:intron 35.0%
!! ATATTTCAGGTTCCTGAAAG+TGG + chr4_2:22537765-22537784 Msa0594550:intron 35.0%
!! TAGTTTGGCTTTGTCAAATC+TGG - chr4_2:22537870-22537889 None:intergenic 35.0%
! TCCCTTTGACCCTAATTTTA+TGG + chr4_2:22538052-22538071 Msa0594550:CDS 35.0%
GTCCATAAAATTAGGGTCAA+AGG - chr4_2:22538057-22538076 None:intergenic 35.0%
AAGTTCAAACTGCTTCTTTC+AGG + chr4_2:22538172-22538191 Msa0594550:CDS 35.0%
TCATCTTCTTCACTACTCCA+TGG - chr4_2:22536276-22536295 None:intergenic 40.0%
! AAAGGTCTTTTGCCAAGAAC+TGG + chr4_2:22536354-22536373 Msa0594550:CDS 40.0%
CAAGAACTGGAAAATCTTGC+CGG + chr4_2:22536367-22536386 Msa0594550:CDS 40.0%
! GAAAATCTTGCCGGTTAAGA+TGG + chr4_2:22536376-22536395 Msa0594550:CDS 40.0%
TTCATTAGAGGAAGAAAGGG+TGG + chr4_2:22537215-22537234 Msa0594550:CDS 40.0%
AAGGGTGGTAATTGAACTAC+AGG + chr4_2:22537230-22537249 Msa0594550:CDS 40.0%
AGGGTGGTAATTGAACTACA+GGG + chr4_2:22537231-22537250 Msa0594550:CDS 40.0%
ATTGAACTACAGGGGCAATT+TGG + chr4_2:22537240-22537259 Msa0594550:CDS 40.0%
TTGAACTACAGGGGCAATTT+GGG + chr4_2:22537241-22537260 Msa0594550:CDS 40.0%
! TTTGGAGTAGCAGGAGAAAA+AGG + chr4_2:22537325-22537344 Msa0594550:CDS 40.0%
!! TTGTGTTTCTGCTGCTTTGA+TGG - chr4_2:22537384-22537403 None:intergenic 40.0%
ATCAAAGCAGCAGAAACACA+AGG + chr4_2:22537383-22537402 Msa0594550:CDS 40.0%
TCAAAGCAGCAGAAACACAA+GGG + chr4_2:22537384-22537403 Msa0594550:CDS 40.0%
TCAGAATGATTGCGTGATTG+CGG - chr4_2:22537520-22537539 None:intergenic 40.0%
! AAGATTTTCCTCCAGCTGAT+TGG - chr4_2:22537793-22537812 None:intergenic 40.0%
!! TTGGCTTTGTCAAATCTGGA+AGG - chr4_2:22537866-22537885 None:intergenic 40.0%
ATCTGTGATTCAGGGAGTAA+TGG - chr4_2:22537990-22538009 None:intergenic 40.0%
ATTACTCCCTGAATCACAGA+TGG + chr4_2:22537989-22538008 Msa0594550:CDS 40.0%
GAAAGTCCATCTGTGATTCA+GGG - chr4_2:22537998-22538017 None:intergenic 40.0%
! AGTGTTTGGAGCAAGAAGAA+TGG + chr4_2:22538104-22538123 Msa0594550:CDS 40.0%
TTTCCTTCAAGTCCAAGACT+TGG - chr4_2:22538140-22538159 None:intergenic 40.0%
TCATCTTCTTCACTACTCCA+TGG - chr4_2:22536276-22536295 None:intergenic 40.0%
! AAAGGTCTTTTGCCAAGAAC+TGG + chr4_2:22536354-22536373 Msa0594550:CDS 40.0%
CAAGAACTGGAAAATCTTGC+CGG + chr4_2:22536367-22536386 Msa0594550:CDS 40.0%
! GAAAATCTTGCCGGTTAAGA+TGG + chr4_2:22536376-22536395 Msa0594550:CDS 40.0%
TTCATTAGAGGAAGAAAGGG+TGG + chr4_2:22537215-22537234 Msa0594550:CDS 40.0%
AAGGGTGGTAATTGAACTAC+AGG + chr4_2:22537230-22537249 Msa0594550:CDS 40.0%
AGGGTGGTAATTGAACTACA+GGG + chr4_2:22537231-22537250 Msa0594550:CDS 40.0%
ATTGAACTACAGGGGCAATT+TGG + chr4_2:22537240-22537259 Msa0594550:CDS 40.0%
TTGAACTACAGGGGCAATTT+GGG + chr4_2:22537241-22537260 Msa0594550:CDS 40.0%
! TTTGGAGTAGCAGGAGAAAA+AGG + chr4_2:22537325-22537344 Msa0594550:CDS 40.0%
!! TTGTGTTTCTGCTGCTTTGA+TGG - chr4_2:22537384-22537403 None:intergenic 40.0%
ATCAAAGCAGCAGAAACACA+AGG + chr4_2:22537383-22537402 Msa0594550:CDS 40.0%
TCAAAGCAGCAGAAACACAA+GGG + chr4_2:22537384-22537403 Msa0594550:CDS 40.0%
TCAGAATGATTGCGTGATTG+CGG - chr4_2:22537520-22537539 None:intergenic 40.0%
! AAGATTTTCCTCCAGCTGAT+TGG - chr4_2:22537793-22537812 None:intergenic 40.0%
!! TTGGCTTTGTCAAATCTGGA+AGG - chr4_2:22537866-22537885 None:intergenic 40.0%
ATCTGTGATTCAGGGAGTAA+TGG - chr4_2:22537990-22538009 None:intergenic 40.0%
ATTACTCCCTGAATCACAGA+TGG + chr4_2:22537989-22538008 Msa0594550:CDS 40.0%
GAAAGTCCATCTGTGATTCA+GGG - chr4_2:22537998-22538017 None:intergenic 40.0%
! AGTGTTTGGAGCAAGAAGAA+TGG + chr4_2:22538104-22538123 Msa0594550:CDS 40.0%
TTTCCTTCAAGTCCAAGACT+TGG - chr4_2:22538140-22538159 None:intergenic 40.0%
TGGAGCTCCATTCGATCAAA+AGG + chr4_2:22536336-22536355 Msa0594550:CDS 45.0%
! CGGCAAGATTTTCCAGTTCT+TGG - chr4_2:22536369-22536388 None:intergenic 45.0%
GGGTGGTAATTGAACTACAG+GGG + chr4_2:22537232-22537251 Msa0594550:CDS 45.0%
AGGGGCAATTTGGGAACAAA+TGG + chr4_2:22537250-22537269 Msa0594550:CDS 45.0%
GGGGCAATTTGGGAACAAAT+GGG + chr4_2:22537251-22537270 Msa0594550:CDS 45.0%
GAGTAGCAGGAGAAAAAGGA+TGG + chr4_2:22537329-22537348 Msa0594550:CDS 45.0%
GGATGGAGAGGAATTATCCA+AGG + chr4_2:22537346-22537365 Msa0594550:CDS 45.0%
!! TGTTTCTGCTGCTTTGATGG+TGG - chr4_2:22537381-22537400 None:intergenic 45.0%
AGCTGATTGGAACCACTTTC+AGG - chr4_2:22537780-22537799 None:intergenic 45.0%
TGAAAGTGGTTCCAATCAGC+TGG + chr4_2:22537779-22537798 Msa0594550:CDS 45.0%
!! AATGAGGGTACTGTGTGAAG+TGG - chr4_2:22537942-22537961 None:intergenic 45.0%
! GCTGATGACGACTCAAATGA+GGG - chr4_2:22537957-22537976 None:intergenic 45.0%
! TGCTGATGACGACTCAAATG+AGG - chr4_2:22537958-22537977 None:intergenic 45.0%
GGAAAGTCCATCTGTGATTC+AGG - chr4_2:22537999-22538018 None:intergenic 45.0%
AGGGATCTTGAACAAGGTCT+TGG - chr4_2:22538037-22538056 None:intergenic 45.0%
GGTCAAAGGGATCTTGAACA+AGG - chr4_2:22538043-22538062 None:intergenic 45.0%
GGAGCAAGAAGAATGGAACT+AGG + chr4_2:22538111-22538130 Msa0594550:CDS 45.0%
TTGCCAAGTCTTGGACTTGA+AGG + chr4_2:22538134-22538153 Msa0594550:CDS 45.0%
TGGAGCTCCATTCGATCAAA+AGG + chr4_2:22536336-22536355 Msa0594550:CDS 45.0%
! CGGCAAGATTTTCCAGTTCT+TGG - chr4_2:22536369-22536388 None:intergenic 45.0%
GGGTGGTAATTGAACTACAG+GGG + chr4_2:22537232-22537251 Msa0594550:CDS 45.0%
AGGGGCAATTTGGGAACAAA+TGG + chr4_2:22537250-22537269 Msa0594550:CDS 45.0%
GGGGCAATTTGGGAACAAAT+GGG + chr4_2:22537251-22537270 Msa0594550:CDS 45.0%
GAGTAGCAGGAGAAAAAGGA+TGG + chr4_2:22537329-22537348 Msa0594550:CDS 45.0%
GGATGGAGAGGAATTATCCA+AGG + chr4_2:22537346-22537365 Msa0594550:CDS 45.0%
!! TGTTTCTGCTGCTTTGATGG+TGG - chr4_2:22537381-22537400 None:intergenic 45.0%
AGCTGATTGGAACCACTTTC+AGG - chr4_2:22537780-22537799 None:intergenic 45.0%
TGAAAGTGGTTCCAATCAGC+TGG + chr4_2:22537779-22537798 Msa0594550:CDS 45.0%
!! AATGAGGGTACTGTGTGAAG+TGG - chr4_2:22537942-22537961 None:intergenic 45.0%
! GCTGATGACGACTCAAATGA+GGG - chr4_2:22537957-22537976 None:intergenic 45.0%
! TGCTGATGACGACTCAAATG+AGG - chr4_2:22537958-22537977 None:intergenic 45.0%
GGAAAGTCCATCTGTGATTC+AGG - chr4_2:22537999-22538018 None:intergenic 45.0%
AGGGATCTTGAACAAGGTCT+TGG - chr4_2:22538037-22538056 None:intergenic 45.0%
GGTCAAAGGGATCTTGAACA+AGG - chr4_2:22538043-22538062 None:intergenic 45.0%
GGAGCAAGAAGAATGGAACT+AGG + chr4_2:22538111-22538130 Msa0594550:CDS 45.0%
TTGCCAAGTCTTGGACTTGA+AGG + chr4_2:22538134-22538153 Msa0594550:CDS 45.0%
CGAATGGAGCTCCAATCTCT+AGG - chr4_2:22536330-22536349 None:intergenic 50.0%
GCAGGAGAAAAAGGATGGAG+AGG + chr4_2:22537334-22537353 Msa0594550:CDS 50.0%
!! TGCTGCTTTGATGGTGGTGA+TGG - chr4_2:22537375-22537394 None:intergenic 50.0%
AAGTGGTTCCAATCAGCTGG+AGG + chr4_2:22537782-22537801 Msa0594550:CDS 50.0%
! TCTTGGCACTCTGGGAATAG+TGG - chr4_2:22538020-22538039 None:intergenic 50.0%
GAACAAGGTCTTGGCACTCT+GGG - chr4_2:22538028-22538047 None:intergenic 50.0%
TGAACAAGGTCTTGGCACTC+TGG - chr4_2:22538029-22538048 None:intergenic 50.0%
GGAACTAGGTTGCCAAGTCT+TGG + chr4_2:22538125-22538144 Msa0594550:CDS 50.0%
CGAATGGAGCTCCAATCTCT+AGG - chr4_2:22536330-22536349 None:intergenic 50.0%
GCAGGAGAAAAAGGATGGAG+AGG + chr4_2:22537334-22537353 Msa0594550:CDS 50.0%
!! TGCTGCTTTGATGGTGGTGA+TGG - chr4_2:22537375-22537394 None:intergenic 50.0%
AAGTGGTTCCAATCAGCTGG+AGG + chr4_2:22537782-22537801 Msa0594550:CDS 50.0%
! TCTTGGCACTCTGGGAATAG+TGG - chr4_2:22538020-22538039 None:intergenic 50.0%
GAACAAGGTCTTGGCACTCT+GGG - chr4_2:22538028-22538047 None:intergenic 50.0%
TGAACAAGGTCTTGGCACTC+TGG - chr4_2:22538029-22538048 None:intergenic 50.0%
GGAACTAGGTTGCCAAGTCT+TGG + chr4_2:22538125-22538144 Msa0594550:CDS 50.0%
!! GATGGTGGTGATGGTGTCCT+TGG - chr4_2:22537366-22537385 None:intergenic 55.0%
! GGGTACTGTGTGAAGTGGAG+TGG - chr4_2:22537937-22537956 None:intergenic 55.0%
!! GATGGTGGTGATGGTGTCCT+TGG - chr4_2:22537366-22537385 None:intergenic 55.0%
! GGGTACTGTGTGAAGTGGAG+TGG - chr4_2:22537937-22537956 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 22536234 22538232 22536234 ID=Msa0594550;Name=Msa0594550
chr4_2 mRNA 22536234 22538232 22536234 ID=Msa0594550-mRNA-1;Parent=Msa0594550;Name=Msa0594550-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|296
chr4_2 exon 22536234 22536427 22536234 ID=Msa0594550-mRNA-1:exon:6101;Parent=Msa0594550-mRNA-1
chr4_2 exon 22537203 22537440 22537203 ID=Msa0594550-mRNA-1:exon:6102;Parent=Msa0594550-mRNA-1
chr4_2 exon 22537774 22538232 22537774 ID=Msa0594550-mRNA-1:exon:6103;Parent=Msa0594550-mRNA-1
chr4_2 CDS 22536234 22536427 22536234 ID=Msa0594550-mRNA-1:cds;Parent=Msa0594550-mRNA-1
chr4_2 CDS 22537203 22537440 22537203 ID=Msa0594550-mRNA-1:cds;Parent=Msa0594550-mRNA-1
chr4_2 CDS 22537774 22538232 22537774 ID=Msa0594550-mRNA-1:cds;Parent=Msa0594550-mRNA-1
Gene Sequence

>Msa0594550

ATGGAAAGAGAATATGAAAGAGGTTACATAAAAAAAGGACCATGGAGTAGTGAAGAAGATGAAGTGTTGTTGAAACATGTTAACAAATATGGTCCTAGAGATTGGAGCTCCATTCGATCAAAAGGTCTTTTGCCAAGAACTGGAAAATCTTGCCGGTTAAGATGGGTTAATAAGCTTAGACCCAACTTGAAAACAGGATGCAAGTTTTCATTAGAGGAAGAAAGGGTGGTAATTGAACTACAGGGGCAATTTGGGAACAAATGGGCCAAAATTGCTACATATTTGGAAGGGAGAACTGACAATGATGTGAAGAATTTTTGGAGTAGCAGGAGAAAAAGGATGGAGAGGAATTATCCAAGGACACCATCACCACCATCAAAGCAGCAGAAACACAAGGGAAAAGCTATTTCTAATCAAGTAAAAGTTGAAAAGGTTCCTGAAAGTGGTTCCAATCAGCTGGAGGAAAATCTTACTTACCCAACTTCTTATATGGGAAACAAAGAGGAGTTCAAGATGATCAACCTTCCAGATTTGACAAAGCCAAACTACCAAAATTTGGAAAGTGAACTTAATGGAATTATTGAGTTTGAGGCCACTCCACTTCACACAGTACCCTCATTTGAGTCGTCATCAGCATACAACTTTCCATTACTCCCTGAATCACAGATGGACTTTCCACTATTCCCAGAGTGCCAAGACCTTGTTCAAGATCCCTTTGACCCTAATTTTATGGACATGTTTGAGCAGAAAAAATGTTCAGAAAGTGTTTGGAGCAAGAAGAATGGAACTAGGTTGCCAAGTCTTGGACTTGAAGGAAATTCTCAGAGTACAAGTTCAAACTGCTTCTTTCAGGATATCCCAACTGAGATTTTTGAATACTTTTCTCAGTAA
Protein sequence

>Msa0594550

MEREYERGYIKKGPWSSEEDEVLLKHVNKYGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSLEEERVVIELQGQFGNKWAKIATYLEGRTDNDVKNFWSSRRKRMERNYPRTPSPPSKQQKHKGKAISNQVKVEKVPESGSNQLEENLTYPTSYMGNKEEFKMINLPDLTKPNYQNLESELNGIIEFEATPLHTVPSFESSSAYNFPLLPESQMDFPLFPECQDLVQDPFDPNFMDMFEQKKCSESVWSKKNGTRLPSLGLEGNSQSTSSNCFFQDIPTEIFEYFSQ*