AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0595550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0595550 MtrunA17_Chr4g0014771 95.876 194 7 1 15 207 1 194 9.22e-139 385
Msa0595550 MtrunA17_Chr1g0174271 67.416 89 27 1 117 203 282 370 2.50e-36 130
Msa0595550 MtrunA17_Chr4g0032951 74.684 79 20 0 126 204 350 428 3.02e-36 131
Msa0595550 MtrunA17_Chr3g0087771 68.132 91 27 1 119 207 308 398 1.51e-35 129
Msa0595550 MtrunA17_Chr8g0351881 67.045 88 27 1 119 204 302 389 1.97e-34 125
Msa0595550 MtrunA17_Chr7g0258181 64.368 87 29 1 119 203 229 315 6.85e-33 120
Msa0595550 MtrunA17_Chr1g0213791 58.333 96 40 0 108 203 242 337 3.51e-32 119
Msa0595550 MtrunA17_Chr2g0329041 68.966 87 24 2 119 203 318 403 1.03e-31 119
Msa0595550 MtrunA17_Chr4g0074161 62.121 66 24 1 130 195 205 269 4.49e-19 84.3
Msa0595550 MtrunA17_Chr3g0131771 60.000 65 26 0 131 195 147 211 9.86e-18 79.7
Msa0595550 MtrunA17_Chr1g0190731 59.091 66 26 1 130 195 192 256 2.24e-17 79.0
Msa0595550 MtrunA17_Chr1g0152131 58.462 65 27 0 131 195 260 324 1.29e-16 77.4
Msa0595550 MtrunA17_Chr5g0421111 56.923 65 28 0 131 195 365 429 1.35e-15 74.7
Msa0595550 MtrunA17_Chr8g0365941 55.385 65 29 0 131 195 305 369 1.51e-15 74.3
Msa0595550 MtrunA17_Chr8g0385911 55.385 65 29 0 131 195 145 209 1.57e-15 73.6
Msa0595550 MtrunA17_Chr7g0234761 55.385 65 29 0 131 195 317 381 2.78e-15 73.6
Msa0595550 MtrunA17_Chr3g0144641 55.385 65 29 0 131 195 191 255 2.95e-15 73.6
Msa0595550 MtrunA17_Chr8g0339091 55.385 65 29 0 131 195 291 355 4.01e-15 73.2
Msa0595550 MtrunA17_Chr4g0035101 53.846 65 30 0 131 195 143 207 1.56e-14 70.9
Msa0595550 MtrunA17_Chr1g0152651 57.576 66 27 1 130 195 273 337 3.88e-14 70.1
Msa0595550 MtrunA17_Chr8g0363921 49.231 65 33 0 131 195 151 215 2.69e-13 67.0
Msa0595550 MtrunA17_Chr5g0415291 47.692 65 34 0 131 195 112 176 4.93e-13 65.9
Msa0595550 MtrunA17_Chr5g0393721 46.667 90 42 3 106 195 204 287 6.29e-13 66.2
Msa0595550 MtrunA17_Chr3g0134741 53.030 66 30 1 130 195 228 292 6.59e-13 66.2
Msa0595550 MtrunA17_Chr6g0484271 49.231 65 33 0 131 195 155 219 8.53e-13 65.5
Msa0595550 MtrunA17_Chr7g0258161 47.761 67 35 0 129 195 171 237 3.38e-12 64.3
Msa0595550 MtrunA17_Chr1g0184841 62.121 66 24 1 130 195 119 183 4.93e-12 63.5
Msa0595550 MtrunA17_Chr3g0134001 56.140 57 24 1 141 197 181 236 1.15e-11 62.4
Msa0595550 MtrunA17_Chr1g0174161 44.776 67 37 0 129 195 158 224 1.62e-11 62.4
Msa0595550 MtrunA17_Chr8g0384141 59.259 54 21 1 141 194 124 176 4.21e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0595550 AT1G35460.1 44.635 233 72 6 24 203 25 253 1.70e-49 162
Msa0595550 AT4G09180.1 46.392 194 71 5 23 207 90 259 2.90e-42 143
Msa0595550 AT1G51140.1 67.442 86 28 0 119 204 292 377 2.09e-36 131
Msa0595550 AT2G42280.1 74.074 81 21 0 123 203 271 351 1.89e-35 128
Msa0595550 AT2G43140.1 68.293 82 26 0 122 203 125 206 1.66e-33 119
Msa0595550 AT2G43140.2 68.293 82 26 0 122 203 222 303 4.30e-33 120
Msa0595550 AT1G05805.1 60.870 92 33 1 119 207 268 359 5.26e-32 119
Msa0595550 AT2G42280.3 80.000 70 14 0 123 192 271 340 1.80e-31 117
Msa0595550 AT1G35460.2 39.801 201 60 7 24 169 25 219 9.02e-28 105
Msa0595550 AT2G24260.2 63.636 66 23 1 130 195 34 98 6.85e-20 84.7
Msa0595550 AT2G24260.1 63.636 66 23 1 130 195 137 201 3.28e-19 84.7
Msa0595550 AT4G30980.1 62.121 66 24 1 130 195 129 193 4.96e-19 83.6
Msa0595550 AT4G30980.2 62.121 66 24 1 130 195 177 241 9.69e-19 83.2
Msa0595550 AT5G58010.1 59.091 66 26 1 130 195 98 162 1.75e-18 82.0
Msa0595550 AT4G34530.1 55.128 78 35 0 118 195 159 236 3.00e-17 79.0
Msa0595550 AT5G50915.3 58.462 65 27 0 131 195 136 200 1.33e-16 76.3
Msa0595550 AT5G50915.4 58.462 65 27 0 131 195 136 200 1.33e-16 76.3
Msa0595550 AT5G50915.1 58.462 65 27 0 131 195 136 200 1.86e-16 76.3
Msa0595550 AT5G50915.2 58.462 65 27 0 131 195 136 200 1.86e-16 76.3
Msa0595550 AT1G10120.2 58.462 65 27 0 131 195 206 270 5.18e-16 75.9
Msa0595550 AT1G10120.1 58.462 65 27 0 131 195 206 270 5.18e-16 75.9
Msa0595550 AT1G26260.5 52.632 76 34 1 120 195 192 265 6.39e-16 75.5
Msa0595550 AT1G26260.3 52.632 76 34 1 120 195 163 236 6.60e-16 75.1
Msa0595550 AT1G26260.4 52.632 76 34 1 120 195 214 287 6.94e-16 75.5
Msa0595550 AT1G26260.1 52.632 76 34 1 120 195 214 287 6.94e-16 75.5
Msa0595550 AT1G26260.6 52.632 76 34 1 120 195 214 287 6.94e-16 75.5
Msa0595550 AT1G26260.2 52.632 76 34 1 120 195 214 287 6.94e-16 75.5
Msa0595550 AT1G68920.1 55.385 65 29 0 131 195 303 367 2.63e-15 73.9
Msa0595550 AT1G68920.4 55.385 65 29 0 131 195 303 367 2.63e-15 73.9
Msa0595550 AT1G68920.2 55.385 65 29 0 131 195 303 367 2.63e-15 73.9
Msa0595550 AT1G68920.3 55.385 65 29 0 131 195 302 366 2.67e-15 73.9
Msa0595550 AT1G18400.2 53.846 65 30 0 131 195 145 209 3.34e-15 72.0
Msa0595550 AT1G18400.1 53.846 65 30 0 131 195 145 209 4.61e-15 72.0
Msa0595550 AT3G07340.1 55.385 65 29 0 131 195 258 322 6.09e-15 73.2
Msa0595550 AT3G07340.2 55.385 65 29 0 131 195 258 322 6.26e-15 72.8
Msa0595550 AT1G73830.2 53.846 65 30 0 131 195 147 211 6.37e-15 71.6
Msa0595550 AT1G73830.1 53.846 65 30 0 131 195 147 211 6.45e-15 71.6
Msa0595550 AT1G25330.1 55.385 65 29 0 131 195 104 168 1.35e-14 70.1
Msa0595550 AT5G48560.1 53.846 65 30 0 131 195 301 365 2.14e-14 71.6
Msa0595550 AT5G48560.2 53.846 65 30 0 131 195 301 365 2.35e-14 71.2
Msa0595550 AT2G14760.1 57.576 66 27 1 130 195 236 300 4.09e-14 70.1
Msa0595550 AT4G33880.1 57.576 66 27 1 130 195 265 329 5.26e-14 70.1
Msa0595550 AT5G43175.1 50.000 72 35 1 126 197 127 197 5.80e-14 68.6
Msa0595550 AT1G27740.1 52.857 70 32 1 126 195 162 230 1.10e-13 68.2
Msa0595550 AT3G23690.1 52.308 65 31 0 131 195 191 255 1.13e-13 68.9
Msa0595550 AT2G18300.1 50.769 65 32 0 131 195 185 249 1.93e-13 68.2
Msa0595550 AT2G18300.2 50.769 65 32 0 131 195 185 249 2.08e-13 68.2
Msa0595550 AT2G18300.3 50.769 65 32 0 131 195 185 249 2.29e-13 68.2
Msa0595550 AT3G57800.2 50.746 67 33 0 129 195 202 268 3.26e-13 67.8
Msa0595550 AT2G42300.1 50.746 67 33 0 129 195 183 249 3.32e-13 67.4
Msa0595550 AT2G42300.4 50.746 67 33 0 129 195 183 249 3.37e-13 67.0
Msa0595550 AT4G36540.2 50.769 65 32 0 131 195 141 205 3.82e-13 67.0
Msa0595550 AT4G36540.1 50.769 65 32 0 131 195 141 205 4.11e-13 67.0
Msa0595550 AT1G59640.1 49.231 65 33 0 131 195 136 200 5.74e-13 66.2
Msa0595550 AT1G59640.2 49.231 65 33 0 131 195 136 200 9.33e-13 66.2
Msa0595550 AT4G02590.3 58.571 70 28 1 126 195 78 146 1.55e-11 62.0
Msa0595550 AT4G02590.2 58.571 70 28 1 126 195 141 209 1.97e-11 62.4
Msa0595550 AT4G02590.1 58.571 70 28 1 126 195 141 209 1.97e-11 62.4
Msa0595550 AT5G62610.2 44.615 65 36 0 131 195 153 217 2.31e-11 62.0
Msa0595550 AT5G62610.1 44.615 65 36 0 131 195 153 217 2.31e-11 62.0
Msa0595550 AT1G03040.2 60.606 66 25 1 130 195 138 202 2.71e-11 62.0
Msa0595550 AT1G03040.1 60.606 66 25 1 130 195 143 207 2.87e-11 62.0
Msa0595550 AT1G03040.3 60.606 66 25 1 130 195 143 207 3.69e-11 61.6

Find 60 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGGGATGCAACCTGTTTC+TGG 0.121390 4_2:-24682103 Msa0595550:intron
AGCTAAACCTTATCCATATT+TGG 0.165931 4_2:+24680243 None:intergenic
AAAGAAAGAAAGATGCAAAT+TGG 0.257159 4_2:-24682277 None:intergenic
TCAAGAACTTGTGCCAAATA+TGG 0.285178 4_2:-24680256 Msa0595550:CDS
TATAGCAATTGACCTTAAAA+TGG 0.344917 4_2:-24680513 Msa0595550:CDS
CTCTACAACAAATACATGTT+GGG 0.348451 4_2:-24678388 Msa0595550:three_prime_UTR
GAGTAAAAGTCAGATAAATA+TGG 0.368339 4_2:+24681896 None:intergenic
AAGAAAGAAAGATGCAAATT+GGG 0.375853 4_2:-24682276 None:intergenic
CCTGTTTCTGGCGGTGGTGG+TGG 0.423693 4_2:-24682091 Msa0595550:CDS
ACTTGTGCCAAATATGGATA+AGG 0.429118 4_2:-24680250 Msa0595550:intron
ATTCCTCATGAAATTGATAA+TGG 0.436666 4_2:+24678360 None:intergenic
ACAAACTTCACTCTGAGTTA+TGG 0.449811 4_2:+24678420 None:intergenic
ACTCTACAACAAATACATGT+TGG 0.455447 4_2:-24678389 Msa0595550:three_prime_UTR
TCCAAGGAGTATTGCTGAAA+GGG 0.458068 4_2:-24680429 Msa0595550:intron
ACCCTTTCAGCAATACTCCT+TGG 0.458639 4_2:+24680428 None:intergenic
CCACCACCACCGCCAGAAAC+AGG 0.468342 4_2:+24682091 None:intergenic
ATGCAACCTGTTTCTGGCGG+TGG 0.482597 4_2:-24682097 Msa0595550:CDS
GTTGCTGCTGGCCATGGACC+TGG 0.485258 4_2:-24681941 Msa0595550:CDS
CAACCTGTTTCTGGCGGTGG+TGG 0.488753 4_2:-24682094 Msa0595550:CDS
AATAACGTTGCTGCTGGCCA+TGG 0.502383 4_2:-24681947 Msa0595550:CDS
TCTAATAATAACGTTGCTGC+TGG 0.510052 4_2:-24681953 Msa0595550:CDS
AACGGAATTATGCATTTACT+CGG 0.513601 4_2:+24678494 None:intergenic
TTCAAAAGAGAATATGCAAA+CGG 0.513621 4_2:+24678476 None:intergenic
GGATGAGACTCAGGAGTTGA+AGG 0.519475 4_2:+24681917 None:intergenic
AAGAAGATGAAGTTGATGAA+AGG 0.520823 4_2:-24682012 Msa0595550:CDS
GATAAATATGGATGAGACTC+AGG 0.521953 4_2:+24681908 None:intergenic
GTTTCTACAGAATCAAATTG+AGG 0.522450 4_2:-24678668 Msa0595550:intron
TTAAAGGGACTTGAGGATAG+TGG 0.523749 4_2:-24680536 Msa0595550:intron
TTGACAGATGTAGGAGTAAG+TGG 0.525544 4_2:+24681869 None:intergenic
CGCTTTGCTCGAATCTTACA+CGG 0.531001 4_2:+24680467 None:intergenic
TTAGCAACATTGACAGATGT+AGG 0.531316 4_2:+24681860 None:intergenic
AACGATTCGAACCAACTCGC+TGG 0.532231 4_2:+24682046 None:intergenic
GCGGTGGTGGTGGTTTGACA+CGG 0.543618 4_2:-24682081 Msa0595550:CDS
TCTAAGAACTCTATCTGAAG+TGG 0.547369 4_2:+24678337 None:intergenic
AAATAAATTACCTGAGTGAA+AGG 0.552908 4_2:+24681833 None:intergenic
CGCAGAGATGTTAGATGAGG+CGG 0.558021 4_2:-24678704 Msa0595550:CDS
ATCCAAGGAGTATTGCTGAA+AGG 0.558668 4_2:-24680430 Msa0595550:CDS
TGGGCAATTTGCATAAACTT+CGG 0.562353 4_2:+24678177 None:intergenic
TCTACAACAAATACATGTTG+GGG 0.569213 4_2:-24678387 Msa0595550:three_prime_UTR
AATTGGGAAAGAAAAGAAAA+CGG 0.570184 4_2:-24682260 Msa0595550:CDS
GACTCAGGAGTTGAAGGACC+AGG 0.572284 4_2:+24681923 None:intergenic
GAGTTGAAGGACCAGGTCCA+TGG 0.588718 4_2:+24681930 None:intergenic
TGCTAATAATCCTTTCACTC+AGG 0.591344 4_2:-24681843 Msa0595550:intron
AAGAAAACGGCGGTGGAACG+TGG 0.593504 4_2:-24682247 Msa0595550:intron
TGTAAGATTCGAGCAAAGCG+TGG 0.594947 4_2:-24680464 Msa0595550:CDS
TTAACTCAACTCCAGCGAGT+TGG 0.603459 4_2:-24682057 Msa0595550:CDS
AACTATCAGAACAGCAAAGG+AGG 0.605279 4_2:-24678533 Msa0595550:CDS
TGTGTGTTTAAAGGGACTTG+AGG 0.606958 4_2:-24680543 Msa0595550:intron
ACGGAATTATGCATTTACTC+GGG 0.609363 4_2:+24678495 None:intergenic
GAAAGAAAAGAAAACGGCGG+TGG 0.612922 4_2:-24682254 Msa0595550:CDS
TTGTTGTTATGTAGGTTCGG+AGG 0.614896 4_2:-24680308 Msa0595550:intron
AGGAACTATCAGAACAGCAA+AGG 0.629143 4_2:-24678536 Msa0595550:CDS
GTGGATTTGCTACTCATCCA+AGG 0.634120 4_2:-24680445 Msa0595550:CDS
GGGATGCAACCTGTTTCTGG+CGG 0.639831 4_2:-24682100 Msa0595550:CDS
GTGCCATTATCAATTTCATG+AGG 0.641751 4_2:-24678363 Msa0595550:three_prime_UTR
CTACAACAAATACATGTTGG+GGG 0.652944 4_2:-24678386 Msa0595550:three_prime_UTR
TACCGCAGAGATGTTAGATG+AGG 0.658172 4_2:-24678707 Msa0595550:CDS
TACAACAAATACATGTTGGG+GGG 0.663265 4_2:-24678385 Msa0595550:three_prime_UTR
CGCCTCATCTAACATCTCTG+CGG 0.686528 4_2:+24678705 None:intergenic
TGGGAAAGAAAAGAAAACGG+CGG 0.764417 4_2:-24682257 Msa0595550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGATATTTTGTTAAGTTAA+TGG + chr4_2:24679470-24679489 None:intergenic 15.0%
!! AACAAAATATCAATCAATTT+AGG - chr4_2:24679477-24679496 Msa0595550:intron 15.0%
!!! AAATAGAACATTTAAAATAG+TGG + chr4_2:24679521-24679540 None:intergenic 15.0%
!! ATCTATATAATATACTGATA+TGG - chr4_2:24679702-24679721 Msa0595550:intron 15.0%
!!! TAATTTGTTTAATCCAAATT+GGG - chr4_2:24680066-24680085 Msa0595550:intron 15.0%
!! TATGTAATAAAAGAAAAGAA+AGG + chr4_2:24680347-24680366 None:intergenic 15.0%
!!! CTTTTGAATTATCATATTTT+TGG - chr4_2:24681961-24681980 Msa0595550:CDS 15.0%
!!! CAAAATTTTATCATCTATAT+GGG + chr4_2:24682267-24682286 None:intergenic 15.0%
!! TTCAATGTAATTATATGTGT+CGG + chr4_2:24678732-24678751 None:intergenic 20.0%
!! TCTCAAATTATTAATGATGT+CGG - chr4_2:24678763-24678782 Msa0595550:intron 20.0%
!!! ATTTAATTTGTATACGTCAT+AGG - chr4_2:24678959-24678978 Msa0595550:intron 20.0%
!! ATATTAACATGTGATTTGAT+TGG - chr4_2:24679134-24679153 Msa0595550:intron 20.0%
!!! AACATAGTTTTACAACTTTT+AGG - chr4_2:24679329-24679348 Msa0595550:intron 20.0%
!! ATTCTTTAGATTATAAGTGT+TGG - chr4_2:24679401-24679420 Msa0595550:intron 20.0%
!! TATATAATATACTGATATGG+AGG - chr4_2:24679705-24679724 Msa0595550:intron 20.0%
!!! TTTTTGTTCTTATTCCTTAT+TGG - chr4_2:24679817-24679836 Msa0595550:intron 20.0%
!!! TTTTGTTCTTATTCCTTATT+GGG - chr4_2:24679818-24679837 Msa0595550:intron 20.0%
!!! CTAAAATTTTGTCCATTTTA+AGG + chr4_2:24679924-24679943 None:intergenic 20.0%
!!! TAAAATGGACAAAATTTTAG+AGG - chr4_2:24679924-24679943 Msa0595550:intron 20.0%
!!! AAAATGGACAAAATTTTAGA+GGG - chr4_2:24679925-24679944 Msa0595550:intron 20.0%
!! TCATATTGCTAATACTAATT+TGG - chr4_2:24680032-24680051 Msa0595550:intron 20.0%
!! CATATTGCTAATACTAATTT+GGG - chr4_2:24680033-24680052 Msa0595550:intron 20.0%
!!! GTAATTTGTTTAATCCAAAT+TGG - chr4_2:24680065-24680084 Msa0595550:intron 20.0%
!! ATTAAACAAACATGTTATAG+TGG + chr4_2:24680217-24680236 None:intergenic 20.0%
!! ACTATAACATGTTTGTTTAA+TGG - chr4_2:24680216-24680235 Msa0595550:intron 20.0%
!!! CTTTTCTTTTATTACATATG+AGG - chr4_2:24680349-24680368 Msa0595550:intron 20.0%
!! AATTATTGACATAATGACAT+TGG - chr4_2:24680541-24680560 Msa0595550:intron 20.0%
!!! AAATTCAGAAAGTACTAATT+GGG - chr4_2:24680574-24680593 Msa0595550:intron 20.0%
!!! CTGAATAAAAAGTATAAAAG+GGG + chr4_2:24680747-24680766 None:intergenic 20.0%
!!! CCTGAATAAAAAGTATAAAA+GGG + chr4_2:24680748-24680767 None:intergenic 20.0%
!!! ACCTGAATAAAAAGTATAAA+AGG + chr4_2:24680749-24680768 None:intergenic 20.0%
!! TTGATATTTCTCAATCATTA+AGG + chr4_2:24680821-24680840 None:intergenic 20.0%
!! TATCAAAAATCATAAATGTG+AGG - chr4_2:24680835-24680854 Msa0595550:intron 20.0%
!!! AGATAAATCTTTCTCATTTT+TGG - chr4_2:24681036-24681055 Msa0595550:intron 20.0%
!!! GATAAATCTTTCTCATTTTT+GGG - chr4_2:24681037-24681056 Msa0595550:intron 20.0%
!!! GAGAATGATATATTTTTTTC+TGG - chr4_2:24681076-24681095 Msa0595550:intron 20.0%
!! TCTCTATCAAAATATAAGAA+AGG - chr4_2:24681406-24681425 Msa0595550:intron 20.0%
!! ATCAAAATATAAGAAAGGAT+AGG - chr4_2:24681411-24681430 Msa0595550:intron 20.0%
!! TCAAAATATAAGAAAGGATA+GGG - chr4_2:24681412-24681431 Msa0595550:intron 20.0%
!!! GCAAAATTTTATCATCTATA+TGG + chr4_2:24682268-24682287 None:intergenic 20.0%
! AATTGGGAAAGAAAAGAAAA+CGG - chr4_2:24678162-24678181 Msa0595550:three_prime_UTR 25.0%
!!! TTTGTTTGTTTTCCAGAAAT+AGG + chr4_2:24678234-24678253 None:intergenic 25.0%
!! ACCTCTTACTATTATTTCTT+AGG - chr4_2:24678301-24678320 Msa0595550:three_prime_UTR 25.0%
!! CCTCTTACTATTATTTCTTA+GGG - chr4_2:24678302-24678321 Msa0595550:three_prime_UTR 25.0%
! GAGTAAAAGTCAGATAAATA+TGG + chr4_2:24678529-24678548 None:intergenic 25.0%
! AAATAAATTACCTGAGTGAA+AGG + chr4_2:24678592-24678611 None:intergenic 25.0%
!! TTATTTACACAAGTTGAATC+CGG - chr4_2:24678606-24678625 Msa0595550:intron 25.0%
! ATAGATAAATCAAGCAAATC+CGG + chr4_2:24678628-24678647 None:intergenic 25.0%
! TTATGAGAGATAACACTTAT+CGG - chr4_2:24678665-24678684 Msa0595550:intron 25.0%
! TATCTACATGCTGATATATA+TGG + chr4_2:24679004-24679023 None:intergenic 25.0%
! AATATCTACATGCTGATATA+TGG + chr4_2:24679006-24679025 None:intergenic 25.0%
!! ATCAGCATGTAGATATTTTT+AGG - chr4_2:24679009-24679028 Msa0595550:intron 25.0%
!!! ATTTTTAGGAGTGTTTTAGT+AGG - chr4_2:24679093-24679112 Msa0595550:intron 25.0%
! ATCTAATACATTCAAGTCTT+AGG - chr4_2:24679229-24679248 Msa0595550:intron 25.0%
!! GTAACTACATGAATATCTTT+TGG + chr4_2:24679659-24679678 None:intergenic 25.0%
! TACTTAGTGAACAAATACTT+TGG - chr4_2:24679794-24679813 Msa0595550:intron 25.0%
!! TAGTTGAATTTTTCCCAATA+AGG + chr4_2:24679834-24679853 None:intergenic 25.0%
! TTCTGTATTTGTGTGTTTAA+AGG - chr4_2:24679870-24679889 Msa0595550:intron 25.0%
! TCTGTATTTGTGTGTTTAAA+GGG - chr4_2:24679871-24679890 Msa0595550:intron 25.0%
! TATAGCAATTGACCTTAAAA+TGG - chr4_2:24679909-24679928 Msa0595550:intron 25.0%
! ACTTGAACAAAATCATTTCT+TGG + chr4_2:24680251-24680270 None:intergenic 25.0%
! AAGATACAAAGCATAATGTA+TGG + chr4_2:24680283-24680302 None:intergenic 25.0%
! ACTTCAAATTCAAAGAGAAA+GGG + chr4_2:24680520-24680539 None:intergenic 25.0%
! AACTTCAAATTCAAAGAGAA+AGG + chr4_2:24680521-24680540 None:intergenic 25.0%
!!! CAAATTCAGAAAGTACTAAT+TGG - chr4_2:24680573-24680592 Msa0595550:intron 25.0%
!!! AATTCAGAAAGTACTAATTG+GGG - chr4_2:24680575-24680594 Msa0595550:intron 25.0%
!!! CTTTTACTAGTTTTGAGTAA+AGG + chr4_2:24680624-24680643 None:intergenic 25.0%
!!! CCCTTTTATACTTTTTATTC+AGG - chr4_2:24680745-24680764 Msa0595550:intron 25.0%
! TTTGAAAGGTGAGAAATATA+GGG - chr4_2:24681007-24681026 Msa0595550:intron 25.0%
!!! GACACTATTAATCTCTTTTT+TGG - chr4_2:24681296-24681315 Msa0595550:intron 25.0%
!!! ACTATTAATCTCTTTTTTGG+CGG - chr4_2:24681299-24681318 Msa0595550:intron 25.0%
!! TTCATTTTCTCTCTTAATTG+TGG - chr4_2:24681658-24681677 Msa0595550:intron 25.0%
! TACAAGAACAAAAGAAACTT+AGG + chr4_2:24681686-24681705 None:intergenic 25.0%
! CTAAATTTATGCTTGTCATT+TGG - chr4_2:24681794-24681813 Msa0595550:intron 25.0%
! TTCAAAAGAGAATATGCAAA+CGG + chr4_2:24681949-24681968 None:intergenic 25.0%
! ATTCCTCATGAAATTGATAA+TGG + chr4_2:24682065-24682084 None:intergenic 25.0%
GGCACTTAGTTTATTGTATT+TGG + chr4_2:24678213-24678232 None:intergenic 30.0%
ATAAACTAAGTGCCTATTTC+TGG - chr4_2:24678219-24678238 Msa0595550:three_prime_UTR 30.0%
CCCTAAGAAATAATAGTAAG+AGG + chr4_2:24678305-24678324 None:intergenic 30.0%
!! AAGAAGATGAAGTTGATGAA+AGG - chr4_2:24678410-24678429 Msa0595550:three_prime_UTR 30.0%
AATACACAATACGGACAATA+AGG + chr4_2:24678800-24678819 None:intergenic 30.0%
CATTTATTAAATGGCAAACG+GGG + chr4_2:24678829-24678848 None:intergenic 30.0%
CCATTTATTAAATGGCAAAC+GGG + chr4_2:24678830-24678849 None:intergenic 30.0%
CCCATTTATTAAATGGCAAA+CGG + chr4_2:24678831-24678850 None:intergenic 30.0%
! CCGTTTGCCATTTAATAAAT+GGG - chr4_2:24678828-24678847 Msa0595550:intron 30.0%
! CGTTTGCCATTTAATAAATG+GGG - chr4_2:24678829-24678848 Msa0595550:intron 30.0%
ACAAGACCCCATTTATTAAA+TGG + chr4_2:24678838-24678857 None:intergenic 30.0%
GCCATGATTTATTAAGCTAT+CGG - chr4_2:24679299-24679318 Msa0595550:intron 30.0%
ACACCTTAGAATCACTTATA+AGG - chr4_2:24679620-24679639 Msa0595550:intron 30.0%
TGTAGTTACAGAAAGATGAT+AGG - chr4_2:24679670-24679689 Msa0595550:intron 30.0%
GAGTATAACTGAACATAATG+AGG - chr4_2:24679749-24679768 Msa0595550:intron 30.0%
!! TGAGTTTCTTGTTGTTATGT+AGG - chr4_2:24680106-24680125 Msa0595550:intron 30.0%
!! TTCTTGTTGTTATGTAGGTT+CGG - chr4_2:24680111-24680130 Msa0595550:intron 30.0%
AGCTAAACCTTATCCATATT+TGG + chr4_2:24680182-24680201 None:intergenic 30.0%
!!! GGTTTTGAGTGAAATTTACT+TGG - chr4_2:24680370-24680389 Msa0595550:intron 30.0%
! TGACATAATGACATTGGTTA+AGG - chr4_2:24680547-24680566 Msa0595550:intron 30.0%
TTTGAGTAAAGGAACTGTTA+AGG + chr4_2:24680613-24680632 None:intergenic 30.0%
TAAATTCAGTGCATACATTC+TGG + chr4_2:24680690-24680709 None:intergenic 30.0%
CTAAGGATTTGTAGTTAAGT+TGG + chr4_2:24680716-24680735 None:intergenic 30.0%
CAACTTAACTACAAATCCTT+AGG - chr4_2:24680714-24680733 Msa0595550:intron 30.0%
TAAAAGGGGATTAAAACCTA+AGG + chr4_2:24680733-24680752 None:intergenic 30.0%
AAAGTCCAAACATGATGTTT+GGG + chr4_2:24680890-24680909 None:intergenic 30.0%
AAAAGTCCAAACATGATGTT+TGG + chr4_2:24680891-24680910 None:intergenic 30.0%
! AACATCATGTTTGGACTTTT+TGG - chr4_2:24680891-24680910 Msa0595550:intron 30.0%
!! TACAATCTTAGGCTTTGTTT+GGG - chr4_2:24680957-24680976 Msa0595550:intron 30.0%
! CTTTGAAAGGTGAGAAATAT+AGG - chr4_2:24681006-24681025 Msa0595550:intron 30.0%
TTGAAAGGTGAGAAATATAG+GGG - chr4_2:24681008-24681027 Msa0595550:intron 30.0%
TGACCAATTCTGTTATAAGT+GGG - chr4_2:24681476-24681495 Msa0595550:intron 30.0%
GTTTCTACAGAATCAAATTG+AGG - chr4_2:24681754-24681773 Msa0595550:intron 30.0%
! TATGCTTGTCATTTGGTATT+CGG - chr4_2:24681801-24681820 Msa0595550:intron 30.0%
TGCATGAATTGATACATTAC+AGG - chr4_2:24681866-24681885 Msa0595550:CDS 30.0%
AACGGAATTATGCATTTACT+CGG + chr4_2:24681931-24681950 None:intergenic 30.0%
ACTCTACAACAAATACATGT+TGG - chr4_2:24682033-24682052 Msa0595550:CDS 30.0%
CTCTACAACAAATACATGTT+GGG - chr4_2:24682034-24682053 Msa0595550:CDS 30.0%
TCTACAACAAATACATGTTG+GGG - chr4_2:24682035-24682054 Msa0595550:CDS 30.0%
GTAAGAGGTAGTACTGTTTA+AGG + chr4_2:24678290-24678309 None:intergenic 35.0%
TCTAATAATAACGTTGCTGC+TGG - chr4_2:24678469-24678488 Msa0595550:three_prime_UTR 35.0%
GATAAATATGGATGAGACTC+AGG + chr4_2:24678517-24678536 None:intergenic 35.0%
TTAGCAACATTGACAGATGT+AGG + chr4_2:24678565-24678584 None:intergenic 35.0%
TGCTAATAATCCTTTCACTC+AGG - chr4_2:24678579-24678598 Msa0595550:intron 35.0%
GAGATAACACTTATCGGATT+AGG - chr4_2:24678671-24678690 Msa0595550:CDS 35.0%
! CCCGTTTGCCATTTAATAAA+TGG - chr4_2:24678827-24678846 Msa0595550:intron 35.0%
TCAAGTCTTAGGTAAAGATG+TGG - chr4_2:24679240-24679259 Msa0595550:intron 35.0%
ATGCAACCATACAAGTGAAT+TGG + chr4_2:24679269-24679288 None:intergenic 35.0%
! GTATGGTTGCATATGAGTTT+TGG - chr4_2:24679277-24679296 Msa0595550:intron 35.0%
GCCGATAGCTTAATAAATCA+TGG + chr4_2:24679303-24679322 None:intergenic 35.0%
CCTCCTTATAAGTGATTCTA+AGG + chr4_2:24679626-24679645 None:intergenic 35.0%
CCTTAGAATCACTTATAAGG+AGG - chr4_2:24679623-24679642 Msa0595550:intron 35.0%
!! GAGGTGTTATTATAGTGACA+TGG - chr4_2:24679724-24679743 Msa0595550:intron 35.0%
! GTGTTATTATAGTGACATGG+AGG - chr4_2:24679727-24679746 Msa0595550:intron 35.0%
CAGAAAAAGTTCACCCAATT+TGG + chr4_2:24680082-24680101 None:intergenic 35.0%
TCAAGAACTTGTGCCAAATA+TGG - chr4_2:24680166-24680185 Msa0595550:intron 35.0%
ACTTGTGCCAAATATGGATA+AGG - chr4_2:24680172-24680191 Msa0595550:intron 35.0%
! CGTGTGTTGTGTTTTATGAT+CGG - chr4_2:24680432-24680451 Msa0595550:CDS 35.0%
AAAGAGAAAGGGTAGTTAAG+TGG + chr4_2:24680509-24680528 None:intergenic 35.0%
! GCATACATTCTGGCATTTTT+CGG + chr4_2:24680680-24680699 None:intergenic 35.0%
CATTAAGGTTACTGCAAAAG+TGG + chr4_2:24680806-24680825 None:intergenic 35.0%
ACATGATGTTTGGGCAAAAA+CGG + chr4_2:24680881-24680900 None:intergenic 35.0%
! TTTTGCCCAAACATCATGTT+TGG - chr4_2:24680882-24680901 Msa0595550:intron 35.0%
! TCATGTTTGGACTTTTTGGA+AGG - chr4_2:24680895-24680914 Msa0595550:intron 35.0%
!! CTACAATCTTAGGCTTTGTT+TGG - chr4_2:24680956-24680975 Msa0595550:intron 35.0%
GTAAGTTATGCTGTTCAATG+TGG - chr4_2:24681098-24681117 Msa0595550:intron 35.0%
TAGGTAGCCAATTTACCATT+GGG + chr4_2:24681158-24681177 None:intergenic 35.0%
GTGACCAATTCTGTTATAAG+TGG - chr4_2:24681475-24681494 Msa0595550:intron 35.0%
TCTCCCACTTATAACAGAAT+TGG + chr4_2:24681482-24681501 None:intergenic 35.0%
TTCTGTTATAAGTGGGAGAA+CGG - chr4_2:24681483-24681502 Msa0595550:intron 35.0%
! TTTTGCAGTTAGTAACCGTT+TGG - chr4_2:24681534-24681553 Msa0595550:intron 35.0%
TTTGCAGTTAGTAACCGTTT+GGG - chr4_2:24681535-24681554 Msa0595550:intron 35.0%
ACGGAATTATGCATTTACTC+GGG + chr4_2:24681930-24681949 None:intergenic 35.0%
ACAAACTTCACTCTGAGTTA+TGG + chr4_2:24682005-24682024 None:intergenic 35.0%
CTACAACAAATACATGTTGG+GGG - chr4_2:24682036-24682055 Msa0595550:CDS 35.0%
TACAACAAATACATGTTGGG+GGG - chr4_2:24682037-24682056 Msa0595550:CDS 35.0%
! GTGCCATTATCAATTTCATG+AGG - chr4_2:24682059-24682078 Msa0595550:CDS 35.0%
TCTAAGAACTCTATCTGAAG+TGG + chr4_2:24682088-24682107 None:intergenic 35.0%
TGGGCAATTTGCATAAACTT+CGG + chr4_2:24682248-24682267 None:intergenic 35.0%
TGGGAAAGAAAAGAAAACGG+CGG - chr4_2:24678165-24678184 Msa0595550:three_prime_UTR 40.0%
TTGACAGATGTAGGAGTAAG+TGG + chr4_2:24678556-24678575 None:intergenic 40.0%
GGGTCTCACAATACACAATA+CGG + chr4_2:24678809-24678828 None:intergenic 40.0%
GTTAGAAGCCCAATACTAGA+CGG - chr4_2:24679187-24679206 Msa0595550:intron 40.0%
CTCACTTTCCGTCTAGTATT+GGG + chr4_2:24679198-24679217 None:intergenic 40.0%
TCTCACTTTCCGTCTAGTAT+TGG + chr4_2:24679199-24679218 None:intergenic 40.0%
AATACTAGACGGAAAGTGAG+AGG - chr4_2:24679198-24679217 Msa0595550:intron 40.0%
TGGTGTCCAATTCACTTGTA+TGG - chr4_2:24679260-24679279 Msa0595550:intron 40.0%
TGTGTGTTTAAAGGGACTTG+AGG - chr4_2:24679879-24679898 Msa0595550:intron 40.0%
TTAAAGGGACTTGAGGATAG+TGG - chr4_2:24679886-24679905 Msa0595550:intron 40.0%
!! ATCCAAGGAGTATTGCTGAA+AGG - chr4_2:24679992-24680011 Msa0595550:intron 40.0%
!! TCCAAGGAGTATTGCTGAAA+GGG - chr4_2:24679993-24680012 Msa0595550:intron 40.0%
! TTGTTGTTATGTAGGTTCGG+AGG - chr4_2:24680114-24680133 Msa0595550:intron 40.0%
AAACGGAGACATATCAGACA+AGG + chr4_2:24680864-24680883 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - chr4_2:24680964-24680983 Msa0595550:intron 40.0%
AGGATCTCAAATGAGAACGT+AGG - chr4_2:24681132-24681151 Msa0595550:intron 40.0%
CTAGGTAGCCAATTTACCAT+TGG + chr4_2:24681159-24681178 None:intergenic 40.0%
TAACATCACTCTCCACCTAA+TGG + chr4_2:24681192-24681211 None:intergenic 40.0%
!!! CTCTTTTTTGGCGGAATTCA+CGG - chr4_2:24681308-24681327 Msa0595550:intron 40.0%
!!! TCTTTTTTGGCGGAATTCAC+GGG - chr4_2:24681309-24681328 Msa0595550:intron 40.0%
GGATAGGGAATAATATGACG+TGG - chr4_2:24681427-24681446 Msa0595550:intron 40.0%
AGGGAATAATATGACGTGGT+AGG - chr4_2:24681431-24681450 Msa0595550:intron 40.0%
GGGAATAATATGACGTGGTA+GGG - chr4_2:24681432-24681451 Msa0595550:intron 40.0%
TCTGTTATAAGTGGGAGAAC+GGG - chr4_2:24681484-24681503 Msa0595550:intron 40.0%
! AGTTAGTAACCGTTTGGGTT+GGG - chr4_2:24681540-24681559 Msa0595550:intron 40.0%
! GCATTTGATCTGGGATTACA+CGG - chr4_2:24681592-24681611 Msa0595550:intron 40.0%
! CATTTGATCTGGGATTACAC+GGG - chr4_2:24681593-24681612 Msa0595550:intron 40.0%
AGGAACTATCAGAACAGCAA+AGG - chr4_2:24681886-24681905 Msa0595550:CDS 40.0%
AACTATCAGAACAGCAAAGG+AGG - chr4_2:24681889-24681908 Msa0595550:CDS 40.0%
GAAAGAAAAGAAAACGGCGG+TGG - chr4_2:24678168-24678187 Msa0595550:three_prime_UTR 45.0%
TTAGGGATGCAACCTGTTTC+TGG - chr4_2:24678319-24678338 Msa0595550:three_prime_UTR 45.0%
TTAACTCAACTCCAGCGAGT+TGG - chr4_2:24678365-24678384 Msa0595550:three_prime_UTR 45.0%
! TTATCGGATTAGGTGTGTCC+CGG - chr4_2:24678681-24678700 Msa0595550:CDS 45.0%
ACACAACGCATGTCTGATAC+CGG + chr4_2:24678703-24678722 None:intergenic 45.0%
TGATTGGATGCCTGTGTTGT+TGG - chr4_2:24679150-24679169 Msa0595550:intron 45.0%
ATTCGACACACCAACAACAC+AGG + chr4_2:24679163-24679182 None:intergenic 45.0%
CGCTTTGCTCGAATCTTACA+CGG + chr4_2:24679958-24679977 None:intergenic 45.0%
TGTAAGATTCGAGCAAAGCG+TGG - chr4_2:24679958-24679977 Msa0595550:intron 45.0%
!! GTGGATTTGCTACTCATCCA+AGG - chr4_2:24679977-24679996 Msa0595550:intron 45.0%
ACCCTTTCAGCAATACTCCT+TGG + chr4_2:24679997-24680016 None:intergenic 45.0%
GAAGGTGAAGTCTTCCTCTA+TGG - chr4_2:24680913-24680932 Msa0595550:intron 45.0%
CGTGTCTGTGTTTACCATAG+AGG + chr4_2:24680930-24680949 None:intergenic 45.0%
ATGGTAAACACAGACACGCT+TGG - chr4_2:24680932-24680951 Msa0595550:intron 45.0%
CACGCTTGGACTACAATCTT+AGG - chr4_2:24680946-24680965 Msa0595550:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr4_2:24680968-24680987 Msa0595550:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr4_2:24680969-24680988 Msa0595550:intron 45.0%
TCAATGTGGCAGTGTCTGTT+AGG - chr4_2:24681112-24681131 Msa0595550:intron 45.0%
AAATGAGAACGTAGGCCCAA+TGG - chr4_2:24681140-24681159 Msa0595550:intron 45.0%
ACGTAGGCCCAATGGTAAAT+TGG - chr4_2:24681148-24681167 Msa0595550:intron 45.0%
!! CCTAATGGACTTGTGCAACT+AGG + chr4_2:24681177-24681196 None:intergenic 45.0%
CCTAGTTGCACAAGTCCATT+AGG - chr4_2:24681174-24681193 Msa0595550:intron 45.0%
AGTTGCACAAGTCCATTAGG+TGG - chr4_2:24681177-24681196 Msa0595550:intron 45.0%
CAGTTAGTAACCGTTTGGGT+TGG - chr4_2:24681539-24681558 Msa0595550:intron 45.0%
AGTGTTTCATCTCTTCTGCG+AGG - chr4_2:24681568-24681587 Msa0595550:intron 45.0%
TACCGCAGAGATGTTAGATG+AGG - chr4_2:24681715-24681734 Msa0595550:intron 45.0%
AACGATTCGAACCAACTCGC+TGG + chr4_2:24678379-24678398 None:intergenic 50.0%
AATAACGTTGCTGCTGGCCA+TGG - chr4_2:24678475-24678494 Msa0595550:three_prime_UTR 50.0%
GGATGAGACTCAGGAGTTGA+AGG + chr4_2:24678508-24678527 None:intergenic 50.0%
CACAACGCATGTCTGATACC+GGG + chr4_2:24678702-24678721 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr4_2:24680967-24680986 Msa0595550:intron 50.0%
! GGCTTAGTGGGTGTAAAGAG+CGG - chr4_2:24681330-24681349 Msa0595550:intron 50.0%
! TTAGTGGGTGTAAAGAGCGG+TGG - chr4_2:24681333-24681352 Msa0595550:intron 50.0%
!! TCTGCGAGGAGCATTTGATC+TGG - chr4_2:24681582-24681601 Msa0595550:intron 50.0%
!! CTGCGAGGAGCATTTGATCT+GGG - chr4_2:24681583-24681602 Msa0595550:intron 50.0%
CGCCTCATCTAACATCTCTG+CGG + chr4_2:24681720-24681739 None:intergenic 50.0%
CGCAGAGATGTTAGATGAGG+CGG - chr4_2:24681718-24681737 Msa0595550:intron 50.0%
AAGAAAACGGCGGTGGAACG+TGG - chr4_2:24678175-24678194 Msa0595550:three_prime_UTR 55.0%
!! GGGATGCAACCTGTTTCTGG+CGG - chr4_2:24678322-24678341 Msa0595550:three_prime_UTR 55.0%
!! ATGCAACCTGTTTCTGGCGG+TGG - chr4_2:24678325-24678344 Msa0595550:three_prime_UTR 55.0%
GAGTTGAAGGACCAGGTCCA+TGG + chr4_2:24678495-24678514 None:intergenic 55.0%
GACTCAGGAGTTGAAGGACC+AGG + chr4_2:24678502-24678521 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - chr4_2:24680972-24680991 Msa0595550:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - chr4_2:24680973-24680992 Msa0595550:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG - chr4_2:24680974-24680993 Msa0595550:intron 55.0%
GCGGAATTCACGGGCTTAGT+GGG - chr4_2:24681318-24681337 Msa0595550:intron 55.0%
ATATGACGTGGTAGGGAGCG+AGG - chr4_2:24681439-24681458 Msa0595550:intron 55.0%
TATGACGTGGTAGGGAGCGA+GGG - chr4_2:24681440-24681459 Msa0595550:intron 55.0%
TAAGTGGGAGAACGGGAGAG+AGG - chr4_2:24681491-24681510 Msa0595550:intron 55.0%
AAGTGGGAGAACGGGAGAGA+GGG - chr4_2:24681492-24681511 Msa0595550:intron 55.0%
CACTCTCTGCCCAACCCAAA+CGG + chr4_2:24681552-24681571 None:intergenic 55.0%
!! CAACCTGTTTCTGGCGGTGG+TGG - chr4_2:24678328-24678347 Msa0595550:three_prime_UTR 60.0%
!! GCGGTGGTGGTGGTTTGACA+CGG - chr4_2:24678341-24678360 Msa0595550:three_prime_UTR 60.0%
GAGTTTGGAGGGGAGGGGAA+GGG - chr4_2:24680979-24680998 Msa0595550:intron 60.0%
!! GGGGAAGGGAGGGCTTTGAA+AGG - chr4_2:24680993-24681012 Msa0595550:intron 60.0%
GGCGGAATTCACGGGCTTAG+TGG - chr4_2:24681317-24681336 Msa0595550:intron 60.0%
AGGGAGCGAGGGTGAGCAAA+TGG - chr4_2:24681451-24681470 Msa0595550:intron 60.0%
GGAGAACGGGAGAGAGGGAA+GGG - chr4_2:24681497-24681516 Msa0595550:intron 60.0%
AACGGGAGAGAGGGAAGGGA+GGG - chr4_2:24681501-24681520 Msa0595550:intron 60.0%
! AGAGAGGGAAGGGAGGGCAT+TGG - chr4_2:24681507-24681526 Msa0595550:intron 60.0%
CCACCACCACCGCCAGAAAC+AGG + chr4_2:24678334-24678353 None:intergenic 65.0%
!! CCTGTTTCTGGCGGTGGTGG+TGG - chr4_2:24678331-24678350 Msa0595550:three_prime_UTR 65.0%
GTTGCTGCTGGCCATGGACC+TGG - chr4_2:24678481-24678500 Msa0595550:three_prime_UTR 65.0%
GGAGTTTGGAGGGGAGGGGA+AGG - chr4_2:24680978-24680997 Msa0595550:intron 65.0%
TTTGGAGGGGAGGGGAAGGG+AGG - chr4_2:24680982-24681001 Msa0595550:intron 65.0%
TTGGAGGGGAGGGGAAGGGA+GGG - chr4_2:24680983-24681002 Msa0595550:intron 65.0%
GGGAGAACGGGAGAGAGGGA+AGG - chr4_2:24681496-24681515 Msa0595550:intron 65.0%
GAACGGGAGAGAGGGAAGGG+AGG - chr4_2:24681500-24681519 Msa0595550:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 24678157 24682287 24678157 ID=Msa0595550;Name=Msa0595550
chr4_2 mRNA 24678157 24682287 24678157 ID=Msa0595550-mRNA-1;Parent=Msa0595550;Name=Msa0595550-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.8|0.66|1|1|1|6|352|207
chr4_2 exon 24678157 24678556 24678157 ID=Msa0595550-mRNA-1:exon:6685;Parent=Msa0595550-mRNA-1
chr4_2 exon 24678669 24678737 24678669 ID=Msa0595550-mRNA-1:exon:6684;Parent=Msa0595550-mRNA-1
chr4_2 exon 24680251 24680316 24680251 ID=Msa0595550-mRNA-1:exon:6683;Parent=Msa0595550-mRNA-1
chr4_2 exon 24680430 24680552 24680430 ID=Msa0595550-mRNA-1:exon:6682;Parent=Msa0595550-mRNA-1
chr4_2 exon 24681844 24682121 24681844 ID=Msa0595550-mRNA-1:exon:6681;Parent=Msa0595550-mRNA-1
chr4_2 exon 24682248 24682287 24682248 ID=Msa0595550-mRNA-1:exon:6680;Parent=Msa0595550-mRNA-1
chr4_2 CDS 24682248 24682287 24682248 ID=Msa0595550-mRNA-1:cds;Parent=Msa0595550-mRNA-1
chr4_2 CDS 24681844 24682121 24681844 ID=Msa0595550-mRNA-1:cds;Parent=Msa0595550-mRNA-1
chr4_2 CDS 24680430 24680552 24680430 ID=Msa0595550-mRNA-1:cds;Parent=Msa0595550-mRNA-1
chr4_2 CDS 24680251 24680316 24680251 ID=Msa0595550-mRNA-1:cds;Parent=Msa0595550-mRNA-1
chr4_2 CDS 24678669 24678737 24678669 ID=Msa0595550-mRNA-1:cds;Parent=Msa0595550-mRNA-1
chr4_2 CDS 24678509 24678556 24678509 ID=Msa0595550-mRNA-1:cds;Parent=Msa0595550-mRNA-1
chr4_2 three_prime_UTR 24678157 24678508 24678157 ID=Msa0595550-mRNA-1:three_prime_utr;Parent=Msa0595550-mRNA-1
Gene Sequence

>Msa0595550

ATGCAAATTGGGAAAGAAAAGAAAACGGCGGTGGAACGTGGGATGCAACCTGTTTCTGGCGGTGGTGGTGGTTTGACACGGTTTAACTCAACTCCAGCGAGTTGGTTCGAATCGTTTATTCTTAAAGAAGAAGATGAAGTTGATGAAAGGCAACAAGATCATAACTTAAGTTTTACTCAACTGCTTTCTAATAATAACGTTGCTGCTGGCCATGGACCTGGTCCTTCAACTCCTGAGTCTCATCCATATTTATCTGACTTTTACTCTTCACCACTTACTCCTACATCTGTCAATGTTGCTAATAATCCTTTCACTCAGGGACTTGAGGATAGTGGTATAGCAATTGACCTTAAAATGGACAAAATTTTAGAGGGTTCAGTTCCGTGTAAGATTCGAGCAAAGCGTGGATTTGCTACTCATCCAAGGAGTATTGCTGAAAGGGTTCGGAGGACTCGTATTAGTGATCGCATAAGAAAACTTCAAGAACTTGTGCCAAATATGGATAAGCAAACAAATACCGCAGAGATGTTAGATGAGGCGGTAGCTTATGTCAAGTTTCTACAGAATCAAATTGAGGAACTATCAGAACAGCAAAGGAGGTGTAAATGCACGATTCCCGAGTAA
Protein sequence

>Msa0595550

MQIGKEKKTAVERGMQPVSGGGGGLTRFNSTPASWFESFILKEEDEVDERQQDHNLSFTQLLSNNNVAAGHGPGPSTPESHPYLSDFYSSPLTPTSVNVANNPFTQGLEDSGIAIDLKMDKILEGSVPCKIRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQIEELSEQQRRCKCTIPE*