Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0595740 | XP_024626574.1 | 60.323 | 310 | 44 | 5 | 1 | 309 | 1 | 232 | 1.94e-107 | 325 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0595740 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0595740 | MtrunA17_Chr2g0287651 | 64.444 | 135 | 48 | 0 | 175 | 309 | 58 | 192 | 5.39e-56 | 196 |
| Msa0595740 | MtrunA17_Chr8g0389811 | 36.232 | 138 | 84 | 2 | 160 | 293 | 48 | 185 | 6.35e-21 | 89.4 |
| Msa0595740 | MtrunA17_Chr1g0203051 | 32.143 | 196 | 122 | 4 | 122 | 309 | 4 | 196 | 1.72e-20 | 92.8 |
| Msa0595740 | MtrunA17_Chr1g0171741 | 32.258 | 124 | 79 | 2 | 174 | 297 | 119 | 237 | 7.61e-19 | 85.1 |
| Msa0595740 | MtrunA17_Chr6g0458391 | 39.655 | 116 | 63 | 5 | 196 | 309 | 95 | 205 | 5.47e-14 | 73.2 |
| Msa0595740 | MtrunA17_Chr6g0458391 | 39.516 | 124 | 69 | 4 | 183 | 303 | 214 | 334 | 3.97e-13 | 70.5 |
| Msa0595740 | MtrunA17_Chr2g0329361 | 40.000 | 110 | 58 | 3 | 189 | 294 | 58 | 163 | 1.20e-13 | 70.1 |
| Msa0595740 | MtrunA17_Chr6g0473421 | 40.000 | 80 | 48 | 0 | 188 | 267 | 51 | 130 | 1.11e-12 | 65.1 |
| Msa0595740 | MtrunA17_Chr1g0203721 | 39.496 | 119 | 64 | 5 | 189 | 303 | 61 | 175 | 1.96e-12 | 68.6 |
| Msa0595740 | MtrunA17_Chr6g0479721 | 47.573 | 103 | 51 | 2 | 1 | 102 | 1 | 101 | 7.89e-12 | 62.0 |
| Msa0595740 | MtrunA17_Chr1g0202341 | 31.293 | 147 | 88 | 4 | 191 | 326 | 50 | 194 | 1.94e-11 | 65.1 |
| Msa0595740 | MtrunA17_Chr2g0331371 | 36.792 | 106 | 67 | 0 | 188 | 293 | 51 | 156 | 6.60e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0595740 | AT3G07500.1 | 39.048 | 105 | 60 | 3 | 196 | 299 | 37 | 138 | 3.71e-12 | 65.5 |
Find 67 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGACTTTACGGATTT+TGG | 0.057115 | 4_2:-25121318 | Msa0595740:CDS |
| TGTTCATTACAGACCCAAAA+AGG | 0.258968 | 4_2:-25120515 | Msa0595740:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 4_2:-25121096 | Msa0595740:CDS |
| CATTAACTGCTGAAGGAATA+AGG | 0.318241 | 4_2:-25120771 | Msa0595740:CDS |
| TGCTGAAGGAATAAGGAAAA+TGG | 0.318497 | 4_2:-25120764 | Msa0595740:CDS |
| AAACAACAACAATGACTTTA+CGG | 0.325210 | 4_2:-25121325 | Msa0595740:CDS |
| CTGTTAGGAAGAGTGATATT+AGG | 0.332219 | 4_2:-25120678 | Msa0595740:CDS |
| CATTGGTTGGAGTAGGTTCA+TGG | 0.364482 | 4_2:+25120455 | None:intergenic |
| AGCATTTATCAAGGTTAGAT+AGG | 0.409294 | 4_2:-25120588 | Msa0595740:CDS |
| GATTATAGTGCTGGTGATAA+AGG | 0.421954 | 4_2:-25121072 | Msa0595740:CDS |
| GGTACACCGAAACATGATTA+CGG | 0.433163 | 4_2:-25121297 | Msa0595740:CDS |
| CGAGGCTGCTGAAATCTATA+CGG | 0.448201 | 4_2:-25119397 | Msa0595740:CDS |
| TAATGAACATGGAGCCTAGC+TGG | 0.450234 | 4_2:+25120529 | None:intergenic |
| TATAAGTACGGTAAGTGTAA+AGG | 0.460291 | 4_2:-25120706 | Msa0595740:CDS |
| GATATTAGGCACAATGTTAA+CGG | 0.462762 | 4_2:-25120664 | Msa0595740:CDS |
| GATGAGCGATATGATGAAAC+TGG | 0.468588 | 4_2:-25121129 | Msa0595740:CDS |
| GAAACATATCCGATCATTGT+TGG | 0.469215 | 4_2:-25121249 | Msa0595740:CDS |
| TGATTACGGTTCTACGGATG+TGG | 0.481654 | 4_2:-25121283 | Msa0595740:CDS |
| TGTTCTGGTGATTATAGTGC+TGG | 0.489646 | 4_2:-25121081 | Msa0595740:CDS |
| AAGAATACTCAAAGGAATAC+AGG | 0.490976 | 4_2:-25121153 | Msa0595740:CDS |
| CGCAGATGAGTTGTCAGCAC+AGG | 0.491267 | 4_2:+25119432 | None:intergenic |
| AAACATATCCGATCATTGTT+GGG | 0.491804 | 4_2:-25121248 | Msa0595740:CDS |
| GAGCGAAGAAGCATTTATCA+AGG | 0.496128 | 4_2:-25120597 | Msa0595740:CDS |
| GCAGTATGTATGCAACAAGC+AGG | 0.502107 | 4_2:-25120626 | Msa0595740:CDS |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 4_2:-25120806 | Msa0595740:CDS |
| GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 4_2:-25120817 | Msa0595740:CDS |
| GTGAAAGAAGAGATTATGAA+AGG | 0.507624 | 4_2:-25119357 | None:intergenic |
| GTAGAACCGTAATCATGTTT+CGG | 0.514557 | 4_2:+25121291 | None:intergenic |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 4_2:-25120778 | Msa0595740:CDS |
| CCGATCATTGTTGGGAGTGG+TGG | 0.525336 | 4_2:-25121240 | Msa0595740:CDS |
| GATGAAAGTCAAGGTGTTGA+AGG | 0.526322 | 4_2:-25121027 | Msa0595740:CDS |
| CCACCACTCCCAACAATGAT+CGG | 0.545431 | 4_2:+25121240 | None:intergenic |
| GAAACATGATTACGGTTCTA+CGG | 0.552732 | 4_2:-25121289 | Msa0595740:CDS |
| TGTAAATGCACAGCATTGGT+TGG | 0.565762 | 4_2:+25120442 | None:intergenic |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 4_2:-25120801 | Msa0595740:CDS |
| TATCCGATCATTGTTGGGAG+TGG | 0.573961 | 4_2:-25121243 | Msa0595740:CDS |
| GCAGATGAGTTGTCAGCACA+GGG | 0.575960 | 4_2:+25119433 | None:intergenic |
| AGGGTGTAAATGCACAGCAT+TGG | 0.584309 | 4_2:+25120438 | None:intergenic |
| CAGTATGTATGCAACAAGCA+GGG | 0.584535 | 4_2:-25120625 | Msa0595740:CDS |
| GATGAAGGTGAACGTGATGA+AGG | 0.589312 | 4_2:-25120952 | Msa0595740:CDS |
| GATGAACGTGAAGGTGATGA+AGG | 0.589312 | 4_2:-25120967 | Msa0595740:CDS |
| GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 4_2:-25121060 | Msa0595740:CDS |
| GTTGAAGGTGAACGTGATGA+AGG | 0.592601 | 4_2:-25121012 | Msa0595740:CDS |
| GAAGGTGAACGTGATGAAGG+TGG | 0.592672 | 4_2:-25120949 | Msa0595740:CDS |
| GGAGACAATGAAAGTGATGA+TGG | 0.609236 | 4_2:-25121108 | Msa0595740:CDS |
| AGTGAAGGTCATGGTAGTGA+AGG | 0.614950 | 4_2:-25120856 | Msa0595740:CDS |
| TCTGCGTTGTCTTGAACGCG+AGG | 0.617404 | 4_2:-25119415 | Msa0595740:CDS |
| AGTATGTATGCAACAAGCAG+GGG | 0.634341 | 4_2:-25120624 | Msa0595740:CDS |
| TGCACAGCATTGGTTGGAGT+AGG | 0.638605 | 4_2:+25120448 | None:intergenic |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 4_2:-25120543 | Msa0595740:CDS |
| GGTGAACGTGATGAAGGTGG+AGG | 0.647603 | 4_2:-25120946 | Msa0595740:CDS |
| TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 4_2:-25120812 | Msa0595740:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 4_2:-25120865 | Msa0595740:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 4_2:-25120910 | Msa0595740:CDS |
| TTAACGGTGAGATTGTAATG+AGG | 0.680367 | 4_2:-25120648 | Msa0595740:CDS |
| GATGATGATGATGTGAGTCA+TGG | 0.683220 | 4_2:-25121186 | Msa0595740:CDS |
| ACTTTGTACGAGTGAGACGT+CGG | 0.685988 | 4_2:+25120554 | None:intergenic |
| AGTGAAGTTGATGAAAGTGA+AGG | 0.694719 | 4_2:-25120886 | Msa0595740:CDS |
| CTGTTTATCGAAAATATCCG+AGG | 0.696975 | 4_2:-25120417 | Msa0595740:intron |
| GGTGGAGGTGATGAAAGTGA+AGG | 0.700815 | 4_2:-25120931 | Msa0595740:CDS |
| GACAATGAAAGTGATGATGG+TGG | 0.706532 | 4_2:-25121105 | Msa0595740:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 4_2:-25120871 | Msa0595740:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 4_2:-25120916 | Msa0595740:CDS |
| GGTGAAAGTGATGAAAGTGA+AGG | 0.717258 | 4_2:-25120991 | Msa0595740:CDS |
| AGTGAAGGTGATGAACGTGA+AGG | 0.728116 | 4_2:-25120976 | Msa0595740:CDS |
| AGTGAATGTGATGAAAGTCA+AGG | 0.739796 | 4_2:-25121036 | Msa0595740:CDS |
| CAGATGAGTTGTCAGCACAG+GGG | 0.773409 | 4_2:+25119434 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACGATTTTTATTATAAGTA+CGG | - | chr4_2:25119971-25119990 | Msa0595740:intron | 15.0% |
| !! | AAACAATAAAAACTTATATG+TGG | - | chr4_2:25120727-25120746 | Msa0595740:CDS | 15.0% |
| !! | AACAATAAAAACTTATATGT+GGG | - | chr4_2:25120728-25120747 | Msa0595740:CDS | 15.0% |
| !!! | TACGATTTTTATTATAAGTA+CGG | - | chr4_2:25119971-25119990 | Msa0595740:intron | 15.0% |
| !! | AAACAATAAAAACTTATATG+TGG | - | chr4_2:25120727-25120746 | Msa0595740:CDS | 15.0% |
| !! | AACAATAAAAACTTATATGT+GGG | - | chr4_2:25120728-25120747 | Msa0595740:CDS | 15.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr4_2:25120332-25120351 | Msa0595740:intron | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr4_2:25120333-25120352 | Msa0595740:intron | 20.0% |
| !!! | TATCAAGAATTAAGCTTTTT+TGG | - | chr4_2:25120905-25120924 | Msa0595740:CDS | 20.0% |
| !! | AAATCATAAAGAGTTATGTT+AGG | - | chr4_2:25121132-25121151 | Msa0595740:CDS | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr4_2:25120332-25120351 | Msa0595740:intron | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr4_2:25120333-25120352 | Msa0595740:intron | 20.0% |
| !!! | TATCAAGAATTAAGCTTTTT+TGG | - | chr4_2:25120905-25120924 | Msa0595740:CDS | 20.0% |
| !! | AAATCATAAAGAGTTATGTT+AGG | - | chr4_2:25121132-25121151 | Msa0595740:CDS | 20.0% |
| ! | AAACAACAACAATGACTTTA+CGG | - | chr4_2:25119364-25119383 | Msa0595740:CDS | 25.0% |
| !! | ATTTTACGAAGAATACTCAA+AGG | - | chr4_2:25119528-25119547 | Msa0595740:intron | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr4_2:25119911-25119930 | Msa0595740:intron | 25.0% |
| !! | TTTTGGTCAAAGTAATTGTA+GGG | + | chr4_2:25120414-25120433 | None:intergenic | 25.0% |
| !!! | TTTTTGGTCAAAGTAATTGT+AGG | + | chr4_2:25120415-25120434 | None:intergenic | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | chr4_2:25120545-25120564 | Msa0595740:CDS | 25.0% |
| !!! | AAGAATTAAGCTTTTTTGGA+AGG | - | chr4_2:25120909-25120928 | Msa0595740:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | - | chr4_2:25120941-25120960 | Msa0595740:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | + | chr4_2:25121036-25121055 | None:intergenic | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | - | chr4_2:25121040-25121059 | Msa0595740:CDS | 25.0% |
| !!! | ATTTCTGCATAATTTTGATG+AGG | - | chr4_2:25121175-25121194 | Msa0595740:CDS | 25.0% |
| ! | AAACAACAACAATGACTTTA+CGG | - | chr4_2:25119364-25119383 | Msa0595740:CDS | 25.0% |
| !! | ATTTTACGAAGAATACTCAA+AGG | - | chr4_2:25119528-25119547 | Msa0595740:intron | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr4_2:25119911-25119930 | Msa0595740:intron | 25.0% |
| !! | TTTTGGTCAAAGTAATTGTA+GGG | + | chr4_2:25120414-25120433 | None:intergenic | 25.0% |
| !!! | TTTTTGGTCAAAGTAATTGT+AGG | + | chr4_2:25120415-25120434 | None:intergenic | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | chr4_2:25120545-25120564 | Msa0595740:CDS | 25.0% |
| !!! | AAGAATTAAGCTTTTTTGGA+AGG | - | chr4_2:25120909-25120928 | Msa0595740:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | - | chr4_2:25120941-25120960 | Msa0595740:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | + | chr4_2:25121036-25121055 | None:intergenic | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | - | chr4_2:25121040-25121059 | Msa0595740:CDS | 25.0% |
| !!! | ATTTCTGCATAATTTTGATG+AGG | - | chr4_2:25121175-25121194 | Msa0595740:CDS | 25.0% |
| ! | AACAATGACTTTACGGATTT+TGG | - | chr4_2:25119371-25119390 | Msa0595740:CDS | 30.0% |
| AAACATATCCGATCATTGTT+GGG | - | chr4_2:25119441-25119460 | Msa0595740:CDS | 30.0% | |
| AAGAATACTCAAAGGAATAC+AGG | - | chr4_2:25119536-25119555 | Msa0595740:intron | 30.0% | |
| TATAAGTACGGTAAGTGTAA+AGG | - | chr4_2:25119983-25120002 | Msa0595740:intron | 30.0% | |
| GATATTAGGCACAATGTTAA+CGG | - | chr4_2:25120025-25120044 | Msa0595740:intron | 30.0% | |
| AGCATTTATCAAGGTTAGAT+AGG | - | chr4_2:25120101-25120120 | Msa0595740:intron | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | + | chr4_2:25120190-25120209 | None:intergenic | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr4_2:25120204-25120223 | Msa0595740:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr4_2:25120205-25120224 | Msa0595740:intron | 30.0% |
| ! | TCGGATATTTTCGATAAACA+GGG | + | chr4_2:25120273-25120292 | None:intergenic | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | - | chr4_2:25120341-25120360 | Msa0595740:intron | 30.0% |
| !!! | TAATAACAGCACGCATTTTT+TGG | + | chr4_2:25120431-25120450 | None:intergenic | 30.0% |
| ! | AAAAATGCGTGCTGTTATTA+AGG | - | chr4_2:25120431-25120450 | Msa0595740:CDS | 30.0% |
| GAATATTCACAAAAGGAATG+TGG | + | chr4_2:25120510-25120529 | None:intergenic | 30.0% | |
| !! | GACGTTTGAAATGTCTATTT+TGG | - | chr4_2:25120544-25120563 | Msa0595740:CDS | 30.0% |
| !! | AGATCAGATTATTTCTGCTT+TGG | - | chr4_2:25120582-25120601 | Msa0595740:CDS | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | + | chr4_2:25120686-25120705 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | chr4_2:25120684-25120703 | Msa0595740:CDS | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | - | chr4_2:25120756-25120775 | Msa0595740:CDS | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | - | chr4_2:25120944-25120963 | Msa0595740:CDS | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | - | chr4_2:25120964-25120983 | Msa0595740:CDS | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | - | chr4_2:25120965-25120984 | Msa0595740:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | chr4_2:25120966-25120985 | Msa0595740:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr4_2:25120967-25120986 | Msa0595740:CDS | 30.0% |
| CATATGAGAACAAAGAATTG+TGG | - | chr4_2:25121039-25121058 | Msa0595740:CDS | 30.0% | |
| AAGAGTTATGTTAGGAAGAA+AGG | - | chr4_2:25121140-25121159 | Msa0595740:CDS | 30.0% | |
| !! | TTGTAGCTGATTTTAAATCC+AGG | - | chr4_2:25121225-25121244 | Msa0595740:CDS | 30.0% |
| ! | AACAATGACTTTACGGATTT+TGG | - | chr4_2:25119371-25119390 | Msa0595740:CDS | 30.0% |
| AAACATATCCGATCATTGTT+GGG | - | chr4_2:25119441-25119460 | Msa0595740:CDS | 30.0% | |
| AAGAATACTCAAAGGAATAC+AGG | - | chr4_2:25119536-25119555 | Msa0595740:intron | 30.0% | |
| TATAAGTACGGTAAGTGTAA+AGG | - | chr4_2:25119983-25120002 | Msa0595740:intron | 30.0% | |
| GATATTAGGCACAATGTTAA+CGG | - | chr4_2:25120025-25120044 | Msa0595740:intron | 30.0% | |
| AGCATTTATCAAGGTTAGAT+AGG | - | chr4_2:25120101-25120120 | Msa0595740:intron | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | + | chr4_2:25120190-25120209 | None:intergenic | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr4_2:25120204-25120223 | Msa0595740:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr4_2:25120205-25120224 | Msa0595740:intron | 30.0% |
| ! | TCGGATATTTTCGATAAACA+GGG | + | chr4_2:25120273-25120292 | None:intergenic | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | - | chr4_2:25120341-25120360 | Msa0595740:intron | 30.0% |
| !!! | TAATAACAGCACGCATTTTT+TGG | + | chr4_2:25120431-25120450 | None:intergenic | 30.0% |
| ! | AAAAATGCGTGCTGTTATTA+AGG | - | chr4_2:25120431-25120450 | Msa0595740:CDS | 30.0% |
| GAATATTCACAAAAGGAATG+TGG | + | chr4_2:25120510-25120529 | None:intergenic | 30.0% | |
| !! | GACGTTTGAAATGTCTATTT+TGG | - | chr4_2:25120544-25120563 | Msa0595740:CDS | 30.0% |
| !! | AGATCAGATTATTTCTGCTT+TGG | - | chr4_2:25120582-25120601 | Msa0595740:CDS | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | + | chr4_2:25120686-25120705 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | chr4_2:25120684-25120703 | Msa0595740:CDS | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | - | chr4_2:25120756-25120775 | Msa0595740:CDS | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | - | chr4_2:25120944-25120963 | Msa0595740:CDS | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | - | chr4_2:25120964-25120983 | Msa0595740:CDS | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | - | chr4_2:25120965-25120984 | Msa0595740:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | chr4_2:25120966-25120985 | Msa0595740:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr4_2:25120967-25120986 | Msa0595740:CDS | 30.0% |
| CATATGAGAACAAAGAATTG+TGG | - | chr4_2:25121039-25121058 | Msa0595740:CDS | 30.0% | |
| AAGAGTTATGTTAGGAAGAA+AGG | - | chr4_2:25121140-25121159 | Msa0595740:CDS | 30.0% | |
| !! | TTGTAGCTGATTTTAAATCC+AGG | - | chr4_2:25121225-25121244 | Msa0595740:CDS | 30.0% |
| GTAGAACCGTAATCATGTTT+CGG | + | chr4_2:25119401-25119420 | None:intergenic | 35.0% | |
| GAAACATGATTACGGTTCTA+CGG | - | chr4_2:25119400-25119419 | Msa0595740:CDS | 35.0% | |
| GAAACATATCCGATCATTGT+TGG | - | chr4_2:25119440-25119459 | Msa0595740:CDS | 35.0% | |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr4_2:25119617-25119636 | Msa0595740:intron | 35.0% |
| AGTGAATGTGATGAAAGTCA+AGG | - | chr4_2:25119653-25119672 | Msa0595740:intron | 35.0% | |
| !! | AGTGAAGTTGATGAAAGTGA+AGG | - | chr4_2:25119803-25119822 | Msa0595740:intron | 35.0% |
| ! | GAAGATGATGATGTAGTTGT+TGG | - | chr4_2:25119872-25119891 | Msa0595740:intron | 35.0% |
| CATTAACTGCTGAAGGAATA+AGG | - | chr4_2:25119918-25119937 | Msa0595740:intron | 35.0% | |
| TGCTGAAGGAATAAGGAAAA+TGG | - | chr4_2:25119925-25119944 | Msa0595740:intron | 35.0% | |
| !!! | AGTGTAAAGGTTTTGCTGTT+AGG | - | chr4_2:25119996-25120015 | Msa0595740:intron | 35.0% |
| CTGTTAGGAAGAGTGATATT+AGG | - | chr4_2:25120011-25120030 | Msa0595740:intron | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | chr4_2:25120041-25120060 | Msa0595740:intron | 35.0% | |
| !! | TTTTGGGTCTGTAATGAACA+TGG | + | chr4_2:25120174-25120193 | None:intergenic | 35.0% |
| TGTTCATTACAGACCCAAAA+AGG | - | chr4_2:25120174-25120193 | Msa0595740:intron | 35.0% | |
| GTTCATTACAGACCCAAAAA+GGG | - | chr4_2:25120175-25120194 | Msa0595740:intron | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | + | chr4_2:25120191-25120210 | None:intergenic | 35.0% |
| ! | CTCGGATATTTTCGATAAAC+AGG | + | chr4_2:25120274-25120293 | None:intergenic | 35.0% |
| CTGTTTATCGAAAATATCCG+AGG | - | chr4_2:25120272-25120291 | Msa0595740:intron | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | + | chr4_2:25120292-25120311 | None:intergenic | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | - | chr4_2:25120294-25120313 | Msa0595740:intron | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | - | chr4_2:25120344-25120363 | Msa0595740:intron | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | + | chr4_2:25120517-25120536 | None:intergenic | 35.0% | |
| !! | AAATGTCTATTTTGGGCAGA+TGG | - | chr4_2:25120552-25120571 | Msa0595740:CDS | 35.0% |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr4_2:25120695-25120714 | Msa0595740:CDS | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | - | chr4_2:25120755-25120774 | Msa0595740:CDS | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | + | chr4_2:25120760-25120779 | None:intergenic | 35.0% | |
| ! | CCATCTGTTATAACTGCTTT+TGG | + | chr4_2:25120792-25120811 | None:intergenic | 35.0% |
| CCAAAAGCAGTTATAACAGA+TGG | - | chr4_2:25120789-25120808 | Msa0595740:CDS | 35.0% | |
| GCATCTAAACAAGAATGCTA+TGG | - | chr4_2:25120878-25120897 | Msa0595740:CDS | 35.0% | |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | - | chr4_2:25120968-25120987 | Msa0595740:CDS | 35.0% |
| !!! | TCATATGTTTTGGTAACCCA+TGG | + | chr4_2:25121026-25121045 | None:intergenic | 35.0% |
| !! | AATTTTGATGAGGCAATGAG+AGG | - | chr4_2:25121185-25121204 | Msa0595740:CDS | 35.0% |
| GTAGAACCGTAATCATGTTT+CGG | + | chr4_2:25119401-25119420 | None:intergenic | 35.0% | |
| GAAACATGATTACGGTTCTA+CGG | - | chr4_2:25119400-25119419 | Msa0595740:CDS | 35.0% | |
| GAAACATATCCGATCATTGT+TGG | - | chr4_2:25119440-25119459 | Msa0595740:CDS | 35.0% | |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr4_2:25119617-25119636 | Msa0595740:intron | 35.0% |
| AGTGAATGTGATGAAAGTCA+AGG | - | chr4_2:25119653-25119672 | Msa0595740:intron | 35.0% | |
| !! | AGTGAAGTTGATGAAAGTGA+AGG | - | chr4_2:25119803-25119822 | Msa0595740:intron | 35.0% |
| ! | GAAGATGATGATGTAGTTGT+TGG | - | chr4_2:25119872-25119891 | Msa0595740:intron | 35.0% |
| CATTAACTGCTGAAGGAATA+AGG | - | chr4_2:25119918-25119937 | Msa0595740:intron | 35.0% | |
| TGCTGAAGGAATAAGGAAAA+TGG | - | chr4_2:25119925-25119944 | Msa0595740:intron | 35.0% | |
| !!! | AGTGTAAAGGTTTTGCTGTT+AGG | - | chr4_2:25119996-25120015 | Msa0595740:intron | 35.0% |
| CTGTTAGGAAGAGTGATATT+AGG | - | chr4_2:25120011-25120030 | Msa0595740:intron | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | chr4_2:25120041-25120060 | Msa0595740:intron | 35.0% | |
| !! | TTTTGGGTCTGTAATGAACA+TGG | + | chr4_2:25120174-25120193 | None:intergenic | 35.0% |
| TGTTCATTACAGACCCAAAA+AGG | - | chr4_2:25120174-25120193 | Msa0595740:intron | 35.0% | |
| GTTCATTACAGACCCAAAAA+GGG | - | chr4_2:25120175-25120194 | Msa0595740:intron | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | + | chr4_2:25120191-25120210 | None:intergenic | 35.0% |
| ! | CTCGGATATTTTCGATAAAC+AGG | + | chr4_2:25120274-25120293 | None:intergenic | 35.0% |
| CTGTTTATCGAAAATATCCG+AGG | - | chr4_2:25120272-25120291 | Msa0595740:intron | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | + | chr4_2:25120292-25120311 | None:intergenic | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | - | chr4_2:25120294-25120313 | Msa0595740:intron | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | - | chr4_2:25120344-25120363 | Msa0595740:intron | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | + | chr4_2:25120517-25120536 | None:intergenic | 35.0% | |
| !! | AAATGTCTATTTTGGGCAGA+TGG | - | chr4_2:25120552-25120571 | Msa0595740:CDS | 35.0% |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr4_2:25120695-25120714 | Msa0595740:CDS | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | - | chr4_2:25120755-25120774 | Msa0595740:CDS | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | + | chr4_2:25120760-25120779 | None:intergenic | 35.0% | |
| ! | CCATCTGTTATAACTGCTTT+TGG | + | chr4_2:25120792-25120811 | None:intergenic | 35.0% |
| CCAAAAGCAGTTATAACAGA+TGG | - | chr4_2:25120789-25120808 | Msa0595740:CDS | 35.0% | |
| GCATCTAAACAAGAATGCTA+TGG | - | chr4_2:25120878-25120897 | Msa0595740:CDS | 35.0% | |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | - | chr4_2:25120968-25120987 | Msa0595740:CDS | 35.0% |
| !!! | TCATATGTTTTGGTAACCCA+TGG | + | chr4_2:25121026-25121045 | None:intergenic | 35.0% |
| !! | AATTTTGATGAGGCAATGAG+AGG | - | chr4_2:25121185-25121204 | Msa0595740:CDS | 35.0% |
| GGTACACCGAAACATGATTA+CGG | - | chr4_2:25119392-25119411 | Msa0595740:CDS | 40.0% | |
| ! | GATGATGATGATGTGAGTCA+TGG | - | chr4_2:25119503-25119522 | Msa0595740:intron | 40.0% |
| GATGAGCGATATGATGAAAC+TGG | - | chr4_2:25119560-25119579 | Msa0595740:intron | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | - | chr4_2:25119581-25119600 | Msa0595740:intron | 40.0% | |
| !! | GACAATGAAAGTGATGATGG+TGG | - | chr4_2:25119584-25119603 | Msa0595740:intron | 40.0% |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr4_2:25119608-25119627 | Msa0595740:intron | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr4_2:25119629-25119648 | Msa0595740:intron | 40.0% | |
| !! | GATGAAAGTCAAGGTGTTGA+AGG | - | chr4_2:25119662-25119681 | Msa0595740:intron | 40.0% |
| GGTGAAAGTGATGAAAGTGA+AGG | - | chr4_2:25119698-25119717 | Msa0595740:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr4_2:25119773-25119792 | Msa0595740:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr4_2:25119773-25119792 | Msa0595740:intron | 40.0% | |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr4_2:25119877-25119896 | Msa0595740:intron | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr4_2:25119883-25119902 | Msa0595740:intron | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr4_2:25119888-25119907 | Msa0595740:intron | 40.0% |
| CAGTATGTATGCAACAAGCA+GGG | - | chr4_2:25120064-25120083 | Msa0595740:intron | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | chr4_2:25120065-25120084 | Msa0595740:intron | 40.0% | |
| !! | GAGCGAAGAAGCATTTATCA+AGG | - | chr4_2:25120092-25120111 | Msa0595740:intron | 40.0% |
| !! | TGTAAATGCACAGCATTGGT+TGG | + | chr4_2:25120250-25120269 | None:intergenic | 40.0% |
| ! | ATGCGTGCTGTTATTAAGGA+TGG | - | chr4_2:25120435-25120454 | Msa0595740:CDS | 40.0% |
| GAATATTCTGCCACTGATGA+CGG | - | chr4_2:25120522-25120541 | Msa0595740:CDS | 40.0% | |
| !! | TTATTTCTGCTTTGGCGATG+TGG | - | chr4_2:25120590-25120609 | Msa0595740:CDS | 40.0% |
| GAACAAATACCACTATCCGT+TGG | - | chr4_2:25120638-25120657 | Msa0595740:CDS | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | chr4_2:25120650-25120669 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr4_2:25120651-25120670 | Msa0595740:CDS | 40.0% |
| GCAGTTATAACAGATGGTGA+TGG | - | chr4_2:25120795-25120814 | Msa0595740:CDS | 40.0% | |
| !! | AGATGGTGATGGTTCTATGA+GGG | - | chr4_2:25120806-25120825 | Msa0595740:CDS | 40.0% |
| ATTGCCTTGAGAACAATCCA+TGG | - | chr4_2:25121006-25121025 | Msa0595740:CDS | 40.0% | |
| TTGCCTTGAGAACAATCCAT+GGG | - | chr4_2:25121007-25121026 | Msa0595740:CDS | 40.0% | |
| ! | TAACCCATGGATTGTTCTCA+AGG | + | chr4_2:25121013-25121032 | None:intergenic | 40.0% |
| GGTACACCGAAACATGATTA+CGG | - | chr4_2:25119392-25119411 | Msa0595740:CDS | 40.0% | |
| ! | GATGATGATGATGTGAGTCA+TGG | - | chr4_2:25119503-25119522 | Msa0595740:intron | 40.0% |
| GATGAGCGATATGATGAAAC+TGG | - | chr4_2:25119560-25119579 | Msa0595740:intron | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | - | chr4_2:25119581-25119600 | Msa0595740:intron | 40.0% | |
| !! | GACAATGAAAGTGATGATGG+TGG | - | chr4_2:25119584-25119603 | Msa0595740:intron | 40.0% |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr4_2:25119608-25119627 | Msa0595740:intron | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr4_2:25119629-25119648 | Msa0595740:intron | 40.0% | |
| !! | GATGAAAGTCAAGGTGTTGA+AGG | - | chr4_2:25119662-25119681 | Msa0595740:intron | 40.0% |
| GGTGAAAGTGATGAAAGTGA+AGG | - | chr4_2:25119698-25119717 | Msa0595740:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr4_2:25119773-25119792 | Msa0595740:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr4_2:25119773-25119792 | Msa0595740:intron | 40.0% | |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr4_2:25119877-25119896 | Msa0595740:intron | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr4_2:25119883-25119902 | Msa0595740:intron | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr4_2:25119888-25119907 | Msa0595740:intron | 40.0% |
| CAGTATGTATGCAACAAGCA+GGG | - | chr4_2:25120064-25120083 | Msa0595740:intron | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | chr4_2:25120065-25120084 | Msa0595740:intron | 40.0% | |
| !! | GAGCGAAGAAGCATTTATCA+AGG | - | chr4_2:25120092-25120111 | Msa0595740:intron | 40.0% |
| !! | TGTAAATGCACAGCATTGGT+TGG | + | chr4_2:25120250-25120269 | None:intergenic | 40.0% |
| ! | ATGCGTGCTGTTATTAAGGA+TGG | - | chr4_2:25120435-25120454 | Msa0595740:CDS | 40.0% |
| GAATATTCTGCCACTGATGA+CGG | - | chr4_2:25120522-25120541 | Msa0595740:CDS | 40.0% | |
| !! | TTATTTCTGCTTTGGCGATG+TGG | - | chr4_2:25120590-25120609 | Msa0595740:CDS | 40.0% |
| GAACAAATACCACTATCCGT+TGG | - | chr4_2:25120638-25120657 | Msa0595740:CDS | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | chr4_2:25120650-25120669 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr4_2:25120651-25120670 | Msa0595740:CDS | 40.0% |
| GCAGTTATAACAGATGGTGA+TGG | - | chr4_2:25120795-25120814 | Msa0595740:CDS | 40.0% | |
| !! | AGATGGTGATGGTTCTATGA+GGG | - | chr4_2:25120806-25120825 | Msa0595740:CDS | 40.0% |
| ATTGCCTTGAGAACAATCCA+TGG | - | chr4_2:25121006-25121025 | Msa0595740:CDS | 40.0% | |
| TTGCCTTGAGAACAATCCAT+GGG | - | chr4_2:25121007-25121026 | Msa0595740:CDS | 40.0% | |
| ! | TAACCCATGGATTGTTCTCA+AGG | + | chr4_2:25121013-25121032 | None:intergenic | 40.0% |
| TGATTACGGTTCTACGGATG+TGG | - | chr4_2:25119406-25119425 | Msa0595740:CDS | 45.0% | |
| TATCCGATCATTGTTGGGAG+TGG | - | chr4_2:25119446-25119465 | Msa0595740:intron | 45.0% | |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr4_2:25119593-25119612 | Msa0595740:intron | 45.0% |
| GTTGAAGGTGAACGTGATGA+AGG | - | chr4_2:25119677-25119696 | Msa0595740:intron | 45.0% | |
| AGTGAAGGTGATGAACGTGA+AGG | - | chr4_2:25119713-25119732 | Msa0595740:intron | 45.0% | |
| GATGAACGTGAAGGTGATGA+AGG | - | chr4_2:25119722-25119741 | Msa0595740:intron | 45.0% | |
| GATGAAGGTGAACGTGATGA+AGG | - | chr4_2:25119737-25119756 | Msa0595740:intron | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr4_2:25119779-25119798 | Msa0595740:intron | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr4_2:25119779-25119798 | Msa0595740:intron | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | - | chr4_2:25119788-25119807 | Msa0595740:intron | 45.0% |
| GCAGTATGTATGCAACAAGC+AGG | - | chr4_2:25120063-25120082 | Msa0595740:intron | 45.0% | |
| ACTTTGTACGAGTGAGACGT+CGG | + | chr4_2:25120138-25120157 | None:intergenic | 45.0% | |
| TAATGAACATGGAGCCTAGC+TGG | + | chr4_2:25120163-25120182 | None:intergenic | 45.0% | |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | + | chr4_2:25120237-25120256 | None:intergenic | 45.0% |
| AGGGTGTAAATGCACAGCAT+TGG | + | chr4_2:25120254-25120273 | None:intergenic | 45.0% | |
| TTCTTAGTGAACCCAACACC+AGG | + | chr4_2:25120387-25120406 | None:intergenic | 45.0% | |
| TTTCAAACGTCCGTCATCAG+TGG | + | chr4_2:25120535-25120554 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | chr4_2:25120657-25120676 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr4_2:25120701-25120720 | Msa0595740:CDS | 45.0% |
| !! | CAGATGGTGATGGTTCTATG+AGG | - | chr4_2:25120805-25120824 | Msa0595740:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr4_2:25120818-25120837 | Msa0595740:CDS | 45.0% | |
| TACCTGCGTGACGATTTCTT+TGG | - | chr4_2:25121071-25121090 | Msa0595740:CDS | 45.0% | |
| CGAGGCTGCTGAAATCTATA+CGG | - | chr4_2:25121292-25121311 | Msa0595740:CDS | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | - | chr4_2:25119406-25119425 | Msa0595740:CDS | 45.0% | |
| TATCCGATCATTGTTGGGAG+TGG | - | chr4_2:25119446-25119465 | Msa0595740:intron | 45.0% | |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr4_2:25119593-25119612 | Msa0595740:intron | 45.0% |
| GTTGAAGGTGAACGTGATGA+AGG | - | chr4_2:25119677-25119696 | Msa0595740:intron | 45.0% | |
| AGTGAAGGTGATGAACGTGA+AGG | - | chr4_2:25119713-25119732 | Msa0595740:intron | 45.0% | |
| GATGAACGTGAAGGTGATGA+AGG | - | chr4_2:25119722-25119741 | Msa0595740:intron | 45.0% | |
| GATGAAGGTGAACGTGATGA+AGG | - | chr4_2:25119737-25119756 | Msa0595740:intron | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr4_2:25119779-25119798 | Msa0595740:intron | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr4_2:25119779-25119798 | Msa0595740:intron | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | - | chr4_2:25119788-25119807 | Msa0595740:intron | 45.0% |
| GCAGTATGTATGCAACAAGC+AGG | - | chr4_2:25120063-25120082 | Msa0595740:intron | 45.0% | |
| ACTTTGTACGAGTGAGACGT+CGG | + | chr4_2:25120138-25120157 | None:intergenic | 45.0% | |
| TAATGAACATGGAGCCTAGC+TGG | + | chr4_2:25120163-25120182 | None:intergenic | 45.0% | |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | + | chr4_2:25120237-25120256 | None:intergenic | 45.0% |
| AGGGTGTAAATGCACAGCAT+TGG | + | chr4_2:25120254-25120273 | None:intergenic | 45.0% | |
| TTCTTAGTGAACCCAACACC+AGG | + | chr4_2:25120387-25120406 | None:intergenic | 45.0% | |
| TTTCAAACGTCCGTCATCAG+TGG | + | chr4_2:25120535-25120554 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | chr4_2:25120657-25120676 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr4_2:25120701-25120720 | Msa0595740:CDS | 45.0% |
| !! | CAGATGGTGATGGTTCTATG+AGG | - | chr4_2:25120805-25120824 | Msa0595740:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr4_2:25120818-25120837 | Msa0595740:CDS | 45.0% | |
| TACCTGCGTGACGATTTCTT+TGG | - | chr4_2:25121071-25121090 | Msa0595740:CDS | 45.0% | |
| CGAGGCTGCTGAAATCTATA+CGG | - | chr4_2:25121292-25121311 | Msa0595740:CDS | 45.0% | |
| CCACCACTCCCAACAATGAT+CGG | + | chr4_2:25119452-25119471 | None:intergenic | 50.0% | |
| GAAGGTGAACGTGATGAAGG+TGG | - | chr4_2:25119680-25119699 | Msa0595740:intron | 50.0% | |
| GGTGGAGGTGATGAAAGTGA+AGG | - | chr4_2:25119758-25119777 | Msa0595740:intron | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr4_2:25120146-25120165 | Msa0595740:intron | 50.0% |
| !! | TGCACAGCATTGGTTGGAGT+AGG | + | chr4_2:25120244-25120263 | None:intergenic | 50.0% |
| GGATACATGGTGGCTCAGAA+GGG | - | chr4_2:25120354-25120373 | Msa0595740:intron | 50.0% | |
| AAGGGTGGATATCCTGGTGT+TGG | - | chr4_2:25120372-25120391 | Msa0595740:intron | 50.0% | |
| AGGGTGGATATCCTGGTGTT+GGG | - | chr4_2:25120373-25120392 | Msa0595740:intron | 50.0% | |
| !! | TGGTGATGGTTCTATGAGGG+AGG | - | chr4_2:25120809-25120828 | Msa0595740:CDS | 50.0% |
| TATGAGGGAGGCGATAAAGG+CGG | - | chr4_2:25120821-25120840 | Msa0595740:CDS | 50.0% | |
| CATAGACGATGACGCGTACT+TGG | + | chr4_2:25120852-25120871 | None:intergenic | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | - | chr4_2:25120974-25120993 | Msa0595740:CDS | 50.0% |
| CACCAAAGAAATCGTCACGC+AGG | + | chr4_2:25121076-25121095 | None:intergenic | 50.0% | |
| CTGCGTGACGATTTCTTTGG+TGG | - | chr4_2:25121074-25121093 | Msa0595740:CDS | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | + | chr4_2:25121258-25121277 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | + | chr4_2:25121259-25121278 | None:intergenic | 50.0% | |
| CCACCACTCCCAACAATGAT+CGG | + | chr4_2:25119452-25119471 | None:intergenic | 50.0% | |
| GAAGGTGAACGTGATGAAGG+TGG | - | chr4_2:25119680-25119699 | Msa0595740:intron | 50.0% | |
| GGTGGAGGTGATGAAAGTGA+AGG | - | chr4_2:25119758-25119777 | Msa0595740:intron | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr4_2:25120146-25120165 | Msa0595740:intron | 50.0% |
| !! | TGCACAGCATTGGTTGGAGT+AGG | + | chr4_2:25120244-25120263 | None:intergenic | 50.0% |
| GGATACATGGTGGCTCAGAA+GGG | - | chr4_2:25120354-25120373 | Msa0595740:intron | 50.0% | |
| AAGGGTGGATATCCTGGTGT+TGG | - | chr4_2:25120372-25120391 | Msa0595740:intron | 50.0% | |
| AGGGTGGATATCCTGGTGTT+GGG | - | chr4_2:25120373-25120392 | Msa0595740:intron | 50.0% | |
| !! | TGGTGATGGTTCTATGAGGG+AGG | - | chr4_2:25120809-25120828 | Msa0595740:CDS | 50.0% |
| TATGAGGGAGGCGATAAAGG+CGG | - | chr4_2:25120821-25120840 | Msa0595740:CDS | 50.0% | |
| CATAGACGATGACGCGTACT+TGG | + | chr4_2:25120852-25120871 | None:intergenic | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | - | chr4_2:25120974-25120993 | Msa0595740:CDS | 50.0% |
| CACCAAAGAAATCGTCACGC+AGG | + | chr4_2:25121076-25121095 | None:intergenic | 50.0% | |
| CTGCGTGACGATTTCTTTGG+TGG | - | chr4_2:25121074-25121093 | Msa0595740:CDS | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | + | chr4_2:25121258-25121277 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | + | chr4_2:25121259-25121278 | None:intergenic | 50.0% | |
| CCGATCATTGTTGGGAGTGG+TGG | - | chr4_2:25119449-25119468 | Msa0595740:intron | 55.0% | |
| GGTGAACGTGATGAAGGTGG+AGG | - | chr4_2:25119743-25119762 | Msa0595740:intron | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | - | chr4_2:25120353-25120372 | Msa0595740:intron | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | - | chr4_2:25120357-25120376 | Msa0595740:intron | 55.0% | |
| GCTCAGAAGGGTGGATATCC+TGG | - | chr4_2:25120366-25120385 | Msa0595740:intron | 55.0% | |
| CGCGTCATCGTCTATGTGCT+TGG | - | chr4_2:25120856-25120875 | Msa0595740:CDS | 55.0% | |
| CAGCACAGGGGATGAAAACC+TGG | + | chr4_2:25121246-25121265 | None:intergenic | 55.0% | |
| CGCAGATGAGTTGTCAGCAC+AGG | + | chr4_2:25121260-25121279 | None:intergenic | 55.0% | |
| TCTGCGTTGTCTTGAACGCG+AGG | - | chr4_2:25121274-25121293 | Msa0595740:CDS | 55.0% | |
| CCGATCATTGTTGGGAGTGG+TGG | - | chr4_2:25119449-25119468 | Msa0595740:intron | 55.0% | |
| GGTGAACGTGATGAAGGTGG+AGG | - | chr4_2:25119743-25119762 | Msa0595740:intron | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | - | chr4_2:25120353-25120372 | Msa0595740:intron | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | - | chr4_2:25120357-25120376 | Msa0595740:intron | 55.0% | |
| GCTCAGAAGGGTGGATATCC+TGG | - | chr4_2:25120366-25120385 | Msa0595740:intron | 55.0% | |
| CGCGTCATCGTCTATGTGCT+TGG | - | chr4_2:25120856-25120875 | Msa0595740:CDS | 55.0% | |
| CAGCACAGGGGATGAAAACC+TGG | + | chr4_2:25121246-25121265 | None:intergenic | 55.0% | |
| CGCAGATGAGTTGTCAGCAC+AGG | + | chr4_2:25121260-25121279 | None:intergenic | 55.0% | |
| TCTGCGTTGTCTTGAACGCG+AGG | - | chr4_2:25121274-25121293 | Msa0595740:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 25119359 | 25121352 | 25119359 | ID=Msa0595740;Name=Msa0595740 |
| chr4_2 | mRNA | 25119359 | 25121352 | 25119359 | ID=Msa0595740-mRNA-1;Parent=Msa0595740;Name=Msa0595740-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|0|0|2|0|347 |
| chr4_2 | exon | 25120418 | 25121352 | 25120418 | ID=Msa0595740-mRNA-1:exon:6781;Parent=Msa0595740-mRNA-1 |
| chr4_2 | exon | 25119359 | 25119464 | 25119359 | ID=Msa0595740-mRNA-1:exon:6780;Parent=Msa0595740-mRNA-1 |
| chr4_2 | CDS | 25120418 | 25121352 | 25120418 | ID=Msa0595740-mRNA-1:cds;Parent=Msa0595740-mRNA-1 |
| chr4_2 | CDS | 25119359 | 25119464 | 25119359 | ID=Msa0595740-mRNA-1:cds;Parent=Msa0595740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
