Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0596220 | XP_024628698.2 | 78.929 | 280 | 55 | 2 | 53 | 329 | 1 | 279 | 1.36e-150 | 454 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0596220 | sp|Q9SZL8|FRS5_ARATH | 34.975 | 203 | 125 | 4 | 85 | 281 | 46 | 247 | 8.58e-27 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0596220 | A0A072TFJ2 | 89.423 | 208 | 22 | 0 | 85 | 292 | 1 | 208 | 2.04e-130 | 392 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0596220 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0596220 | MtrunA17_Chr3g0082121 | 50.558 | 269 | 122 | 4 | 67 | 334 | 1 | 259 | 9.04e-76 | 248 |
| Msa0596220 | MtrunA17_Chr5g0401121 | 65.116 | 129 | 41 | 1 | 86 | 214 | 36 | 160 | 6.67e-49 | 163 |
| Msa0596220 | MtrunA17_Chr7g0258861 | 38.938 | 226 | 129 | 6 | 110 | 329 | 10 | 232 | 1.94e-39 | 142 |
| Msa0596220 | MtrunA17_Chr2g0324011 | 39.111 | 225 | 129 | 5 | 110 | 329 | 10 | 231 | 5.38e-39 | 147 |
| Msa0596220 | MtrunA17_Chr6g0458391 | 42.282 | 149 | 82 | 3 | 104 | 250 | 219 | 365 | 1.66e-29 | 120 |
| Msa0596220 | MtrunA17_Chr6g0458391 | 40.157 | 127 | 73 | 3 | 109 | 234 | 90 | 214 | 2.24e-21 | 96.3 |
| Msa0596220 | MtrunA17_Chr5g0448761 | 38.068 | 176 | 105 | 2 | 110 | 281 | 60 | 235 | 2.10e-29 | 120 |
| Msa0596220 | MtrunA17_Chr1g0164591 | 54.206 | 107 | 40 | 2 | 188 | 293 | 1 | 99 | 2.82e-27 | 110 |
| Msa0596220 | MtrunA17_Chr1g0203721 | 32.828 | 198 | 121 | 5 | 103 | 293 | 56 | 248 | 1.78e-22 | 99.8 |
| Msa0596220 | MtrunA17_Chr2g0287651 | 34.615 | 182 | 109 | 5 | 112 | 287 | 77 | 254 | 1.05e-20 | 94.4 |
| Msa0596220 | MtrunA17_Chr7g0238821 | 42.202 | 109 | 58 | 4 | 114 | 220 | 1 | 106 | 1.26e-17 | 77.8 |
| Msa0596220 | MtrunA17_Chr7g0233911 | 35.211 | 142 | 77 | 4 | 78 | 212 | 3 | 136 | 1.39e-17 | 80.9 |
| Msa0596220 | MtrunA17_Chr4g0033611 | 39.683 | 126 | 65 | 4 | 110 | 233 | 76 | 192 | 2.49e-17 | 81.3 |
| Msa0596220 | MtrunA17_Chr1g0202341 | 29.825 | 171 | 113 | 4 | 114 | 281 | 55 | 221 | 1.46e-16 | 81.6 |
| Msa0596220 | MtrunA17_Chr2g0329421 | 40.187 | 107 | 58 | 3 | 110 | 214 | 27 | 129 | 1.84e-16 | 77.8 |
| Msa0596220 | MtrunA17_Chr2g0329031 | 35.246 | 122 | 73 | 3 | 105 | 224 | 7 | 124 | 6.07e-16 | 79.7 |
| Msa0596220 | MtrunA17_Chr1g0203051 | 27.869 | 183 | 109 | 7 | 112 | 283 | 81 | 251 | 4.76e-15 | 77.0 |
| Msa0596220 | MtrunA17_Chr2g0276841 | 29.379 | 177 | 119 | 5 | 107 | 277 | 67 | 243 | 9.09e-15 | 76.3 |
| Msa0596220 | MtrunA17_Chr3g0078041 | 38.462 | 104 | 62 | 2 | 110 | 212 | 50 | 152 | 1.49e-14 | 72.4 |
| Msa0596220 | MtrunA17_Chr2g0294841 | 30.526 | 190 | 101 | 8 | 107 | 276 | 42 | 220 | 2.94e-14 | 74.7 |
| Msa0596220 | MtrunA17_Chr8g0363841 | 28.090 | 178 | 109 | 7 | 117 | 286 | 24 | 190 | 1.45e-12 | 69.3 |
| Msa0596220 | MtrunA17_Chr2g0329361 | 36.190 | 105 | 64 | 2 | 110 | 212 | 61 | 164 | 5.47e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0596220 | AT4G38180.1 | 34.975 | 203 | 125 | 4 | 85 | 281 | 46 | 247 | 8.73e-28 | 115 |
| Msa0596220 | AT3G59470.2 | 34.104 | 173 | 102 | 3 | 52 | 214 | 14 | 184 | 2.43e-18 | 84.3 |
| Msa0596220 | AT3G59470.3 | 34.104 | 173 | 102 | 3 | 52 | 214 | 2 | 172 | 2.47e-18 | 84.3 |
| Msa0596220 | AT3G59470.1 | 34.104 | 173 | 102 | 3 | 52 | 214 | 2 | 172 | 2.47e-18 | 84.3 |
| Msa0596220 | AT4G12850.4 | 37.705 | 122 | 70 | 4 | 103 | 224 | 4 | 119 | 1.22e-16 | 76.6 |
| Msa0596220 | AT4G12850.2 | 38.739 | 111 | 64 | 3 | 103 | 213 | 4 | 110 | 3.14e-16 | 75.5 |
| Msa0596220 | AT4G12850.1 | 38.739 | 111 | 64 | 3 | 103 | 213 | 4 | 110 | 1.07e-15 | 75.1 |
| Msa0596220 | AT1G10240.2 | 28.804 | 184 | 121 | 6 | 102 | 277 | 40 | 221 | 8.76e-15 | 76.6 |
| Msa0596220 | AT1G10240.1 | 28.804 | 184 | 121 | 6 | 102 | 277 | 40 | 221 | 8.76e-15 | 76.6 |
| Msa0596220 | AT3G07500.1 | 40.000 | 105 | 62 | 1 | 110 | 214 | 33 | 136 | 1.93e-14 | 72.4 |
| Msa0596220 | AT1G76320.1 | 35.135 | 111 | 68 | 2 | 114 | 224 | 1 | 107 | 6.81e-14 | 73.9 |
| Msa0596220 | AT1G76320.4 | 35.135 | 111 | 68 | 2 | 114 | 224 | 1 | 107 | 6.81e-14 | 73.9 |
| Msa0596220 | AT1G76320.2 | 35.135 | 111 | 68 | 2 | 114 | 224 | 1 | 107 | 7.05e-14 | 73.9 |
| Msa0596220 | AT1G76320.3 | 35.135 | 111 | 68 | 2 | 114 | 224 | 1 | 107 | 9.63e-14 | 73.2 |
| Msa0596220 | AT2G43280.1 | 39.604 | 101 | 53 | 3 | 116 | 212 | 28 | 124 | 3.37e-13 | 68.6 |
| Msa0596220 | AT4G15090.1 | 24.855 | 173 | 128 | 2 | 110 | 281 | 51 | 222 | 1.71e-11 | 66.6 |
| Msa0596220 | AT4G15090.5 | 24.855 | 173 | 128 | 2 | 110 | 281 | 51 | 222 | 1.71e-11 | 66.6 |
| Msa0596220 | AT4G15090.3 | 24.855 | 173 | 128 | 2 | 110 | 281 | 51 | 222 | 1.71e-11 | 66.6 |
| Msa0596220 | AT4G15090.2 | 24.855 | 173 | 128 | 2 | 110 | 281 | 51 | 222 | 1.71e-11 | 66.6 |
| Msa0596220 | AT4G15090.4 | 24.855 | 173 | 128 | 2 | 110 | 281 | 51 | 222 | 1.71e-11 | 66.6 |
| Msa0596220 | AT5G18960.2 | 37.383 | 107 | 51 | 3 | 110 | 215 | 43 | 134 | 2.53e-11 | 65.9 |
| Msa0596220 | AT5G18960.1 | 37.383 | 107 | 51 | 3 | 110 | 215 | 43 | 134 | 2.53e-11 | 65.9 |
| Msa0596220 | AT2G32250.5 | 30.189 | 106 | 70 | 2 | 114 | 219 | 42 | 143 | 3.56e-11 | 65.5 |
| Msa0596220 | AT2G32250.2 | 30.189 | 106 | 70 | 2 | 114 | 219 | 42 | 143 | 3.70e-11 | 65.5 |
| Msa0596220 | AT2G32250.4 | 30.189 | 106 | 70 | 2 | 114 | 219 | 42 | 143 | 3.70e-11 | 65.5 |
| Msa0596220 | AT2G32250.6 | 30.189 | 106 | 70 | 2 | 114 | 219 | 42 | 143 | 3.94e-11 | 65.5 |
| Msa0596220 | AT2G32250.1 | 30.189 | 106 | 70 | 2 | 114 | 219 | 42 | 143 | 3.94e-11 | 65.5 |
| Msa0596220 | AT2G32250.3 | 30.189 | 106 | 70 | 2 | 114 | 219 | 42 | 143 | 3.94e-11 | 65.5 |
| Msa0596220 | AT2G32250.8 | 30.189 | 106 | 70 | 2 | 114 | 219 | 1 | 102 | 4.03e-11 | 65.1 |
| Msa0596220 | AT2G32250.7 | 30.189 | 106 | 70 | 2 | 114 | 219 | 1 | 102 | 4.25e-11 | 65.1 |
| Msa0596220 | AT3G06250.2 | 35.772 | 123 | 57 | 4 | 91 | 212 | 15 | 116 | 5.40e-11 | 64.7 |
| Msa0596220 | AT3G06250.1 | 35.772 | 123 | 57 | 4 | 91 | 212 | 15 | 116 | 5.40e-11 | 64.7 |
| Msa0596220 | AT3G06250.3 | 35.772 | 123 | 57 | 4 | 91 | 212 | 15 | 116 | 5.40e-11 | 64.7 |
| Msa0596220 | AT2G43280.2 | 38.043 | 92 | 49 | 3 | 125 | 212 | 2 | 89 | 7.99e-11 | 60.8 |
Find 101 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGATTGTGTCAATAAAT+TGG | 0.215486 | 4_2:+25976126 | Msa0596220:intron |
| CTTTAGTGACTGTTTCCTTT+TGG | 0.269240 | 4_2:-25976701 | None:intergenic |
| TTTGGTATTCGTCGAGAATA+TGG | 0.287007 | 4_2:+25976283 | Msa0596220:CDS |
| ATATATTCATGCAAATCTTT+TGG | 0.296908 | 4_2:-25976610 | None:intergenic |
| GATTCGGTTCCCCGTAATTT+CGG | 0.316224 | 4_2:+25977015 | Msa0596220:CDS |
| TTTACGGCGGAATGAGGTTT+TGG | 0.316773 | 4_2:-25976953 | None:intergenic |
| GGGTGGACAGCGGACGGTTT+CGG | 0.319631 | 4_2:+25976917 | Msa0596220:CDS |
| GTAATGTCACCCGCGGTTTA+CGG | 0.320308 | 4_2:-25976969 | None:intergenic |
| TCTGCTCTAGGCTCCCCTTT+TGG | 0.322934 | 4_2:-25976394 | None:intergenic |
| AATGAGTATAGTAAAAGAAT+TGG | 0.336174 | 4_2:+25976259 | Msa0596220:CDS |
| ATTGTCTTGGGAGATGAATA+TGG | 0.358947 | 4_2:+25976580 | Msa0596220:CDS |
| CTGTATTCCACCAGCTTGCT+TGG | 0.359827 | 4_2:-25976635 | None:intergenic |
| GGAAATAAAAGCAGAGTTGA+TGG | 0.361988 | 4_2:+25976304 | Msa0596220:CDS |
| TATAGTAAAAGAATTGGATT+TGG | 0.393932 | 4_2:+25976265 | Msa0596220:CDS |
| AGAAATTAGAACGGGATGTT+CGG | 0.397002 | 4_2:+25976414 | Msa0596220:CDS |
| TTATGTGGGAATGGGAATAA+AGG | 0.419401 | 4_2:+25977218 | Msa0596220:CDS |
| TCGCCGCTGCACCTCTCTCT+TGG | 0.420152 | 4_2:+25975739 | Msa0596220:CDS |
| CGAATTACCTTGAAACCAAA+AGG | 0.436415 | 4_2:+25976686 | Msa0596220:CDS |
| AACGGGATGTTCGGCGCGTA+TGG | 0.445905 | 4_2:+25976423 | Msa0596220:CDS |
| AACAACAAAGGAGGTTTATG+TGG | 0.447972 | 4_2:+25977203 | Msa0596220:CDS |
| GACAAAAGACGTCAACCAAA+AGG | 0.461065 | 4_2:+25976379 | Msa0596220:CDS |
| TAGTGTTGGTAGCAGGATGA+TGG | 0.465525 | 4_2:-25975787 | None:intergenic |
| TAGTGATCTAGAACTGGATC+TGG | 0.466639 | 4_2:+25977161 | Msa0596220:CDS |
| CAATGGCAGCGGCGCTAGAA+TGG | 0.468527 | 4_2:-25975835 | None:intergenic |
| CACCTCGTACACCCTCTTTG+TGG | 0.472129 | 4_2:-25976354 | None:intergenic |
| GCTGCCATTGTTGTTGATCA+AGG | 0.480338 | 4_2:+25975848 | Msa0596220:CDS |
| GGTGGAAAGTTGTCTGAGAA+AGG | 0.481095 | 4_2:-25975648 | None:intergenic |
| GGTTCGTTAGTGTTGGTAGC+AGG | 0.481503 | 4_2:-25975794 | None:intergenic |
| GGACAGCGGACGGTTTCGGC+CGG | 0.481872 | 4_2:+25976921 | Msa0596220:CDS |
| GAGGTGGCTTCGATGATCAC+GGG | 0.484354 | 4_2:-25975678 | None:intergenic |
| CCCGTTCTAATTTCTGCTCT+AGG | 0.484916 | 4_2:-25976406 | None:intergenic |
| TTCGGTGTGAATGGTCGGGT+GGG | 0.485073 | 4_2:+25977042 | Msa0596220:CDS |
| AGTGTTGGTAGCAGGATGAT+GGG | 0.490017 | 4_2:-25975786 | None:intergenic |
| AAGGAGGTTTATGTGGGAAT+GGG | 0.491663 | 4_2:+25977210 | Msa0596220:CDS |
| TGGTCGGAGACGGCGGCGAC+GGG | 0.493538 | 4_2:-25975815 | None:intergenic |
| CCGCGGTTTACGGCGGAATG+AGG | 0.493612 | 4_2:-25976959 | None:intergenic |
| AAAGGAGGTTTATGTGGGAA+TGG | 0.495550 | 4_2:+25977209 | Msa0596220:CDS |
| ACAAAAGACGTCAACCAAAA+GGG | 0.496414 | 4_2:+25976380 | Msa0596220:CDS |
| AGGTGCAGCGGCGAGAGAGA+AGG | 0.503028 | 4_2:-25975730 | None:intergenic |
| AAAGTCTAGTGATCTAGAAC+TGG | 0.503495 | 4_2:+25977155 | Msa0596220:CDS |
| ACAAGCATCACAAATTGTCT+TGG | 0.503759 | 4_2:+25976567 | Msa0596220:CDS |
| CGAATCATATGAACATGCTC+AGG | 0.508001 | 4_2:-25976520 | None:intergenic |
| GAAGAAGAAAGAGTTGAGAT+CGG | 0.508138 | 4_2:+25977249 | Msa0596220:CDS |
| TGCGAACAATGTACCTCACT+TGG | 0.508576 | 4_2:+25976195 | Msa0596220:CDS |
| TGGTTTCAAGGTAATTCGTA+AGG | 0.515695 | 4_2:-25976681 | None:intergenic |
| CTCATTCCGCCGTAAACCGC+GGG | 0.517777 | 4_2:+25976960 | Msa0596220:CDS |
| CAAGCATCACAAATTGTCTT+GGG | 0.518135 | 4_2:+25976568 | Msa0596220:CDS |
| GGAAATGAAGTTTGATTCTG+AGG | 0.518232 | 4_2:+25976216 | Msa0596220:CDS |
| CGAGAGAGAAGGAGAGGTGA+CGG | 0.518457 | 4_2:-25975719 | None:intergenic |
| CAAAATGTGCAACACGGACT+AGG | 0.518753 | 4_2:+25976166 | Msa0596220:CDS |
| CCTAGAGCAGAAATTAGAAC+GGG | 0.531792 | 4_2:+25976406 | Msa0596220:CDS |
| ATGGTCGGAGACGGCGGCGA+CGG | 0.532705 | 4_2:-25975816 | None:intergenic |
| GGTGTGAATGGTCGGGTGGG+CGG | 0.533792 | 4_2:+25977045 | Msa0596220:CDS |
| AGAGGTGGCTTCGATGATCA+CGG | 0.538938 | 4_2:-25975679 | None:intergenic |
| GGCGACGGGTTCGTTAGTGT+TGG | 0.541693 | 4_2:-25975801 | None:intergenic |
| GAAGTTTGATTCTGAGGCGG+CGG | 0.545649 | 4_2:+25976222 | Msa0596220:CDS |
| GGCGCTAGAATGGTCGGAGA+CGG | 0.546289 | 4_2:-25975825 | None:intergenic |
| TGACGGCGGAGCCGATGTGA+AGG | 0.551921 | 4_2:-25975702 | None:intergenic |
| GAAGAAAGAGTTGAGATCGG+TGG | 0.555633 | 4_2:+25977252 | Msa0596220:CDS |
| TCACTAAAGTATAGTGAGGT+GGG | 0.567839 | 4_2:+25976715 | Msa0596220:CDS |
| GGCAGCGGCGCTAGAATGGT+CGG | 0.570384 | 4_2:-25975831 | None:intergenic |
| AACTAGGGGTGGACAGCGGA+CGG | 0.576420 | 4_2:+25976911 | Msa0596220:intron |
| GTCACTAAAGTATAGTGAGG+TGG | 0.577558 | 4_2:+25976714 | Msa0596220:CDS |
| TTTCGGTGTGAATGGTCGGG+TGG | 0.579186 | 4_2:+25977041 | Msa0596220:CDS |
| GTGTTGGTAGCAGGATGATG+GGG | 0.582430 | 4_2:-25975785 | None:intergenic |
| CCTCATTCCGCCGTAAACCG+CGG | 0.585980 | 4_2:+25976959 | Msa0596220:CDS |
| GTATGGTTATTTCACTCGAT+CGG | 0.586251 | 4_2:+25976440 | Msa0596220:CDS |
| TATATATCCAAGCAAGCTGG+TGG | 0.588298 | 4_2:+25976628 | Msa0596220:CDS |
| GAATATATATCCAAGCAAGC+TGG | 0.590655 | 4_2:+25976625 | Msa0596220:CDS |
| CAGCGGCGAGAGAGAAGGAG+AGG | 0.595013 | 4_2:-25975725 | None:intergenic |
| AGACCAAGAGAGAGGTGCAG+CGG | 0.596476 | 4_2:-25975742 | None:intergenic |
| GCTGGTGGAATACAGACAGT+TGG | 0.597501 | 4_2:+25976643 | Msa0596220:CDS |
| GAGAGAAGGAGAGGTGACGG+CGG | 0.598157 | 4_2:-25975716 | None:intergenic |
| CATGCTCAGGTTGAAGTTGG+TGG | 0.600927 | 4_2:-25976507 | None:intergenic |
| TCAAACTTCATTTCCAAGTG+AGG | 0.602359 | 4_2:-25976208 | None:intergenic |
| GCCTAGAGCAGAAATTAGAA+CGG | 0.602891 | 4_2:+25976405 | Msa0596220:CDS |
| GCTAGAATGGTCGGAGACGG+CGG | 0.605325 | 4_2:-25975822 | None:intergenic |
| CAAAAGACGTCAACCAAAAG+GGG | 0.607006 | 4_2:+25976381 | Msa0596220:CDS |
| GAACATGCTCAGGTTGAAGT+TGG | 0.607804 | 4_2:-25976510 | None:intergenic |
| TTGAGATCGGTGGAGCTGAG+TGG | 0.608495 | 4_2:+25977262 | Msa0596220:CDS |
| GAGCCGATGTGAAGGAGAGG+TGG | 0.611326 | 4_2:-25975694 | None:intergenic |
| AACATCATCAACAACAACAA+AGG | 0.617373 | 4_2:+25977191 | Msa0596220:CDS |
| AGATTCACATGCCACAAAGA+GGG | 0.622687 | 4_2:+25976343 | Msa0596220:CDS |
| ACAACAAAGGAGGTTTATGT+GGG | 0.626119 | 4_2:+25977204 | Msa0596220:CDS |
| TTGATCAACAACAATGGCAG+CGG | 0.627743 | 4_2:-25975846 | None:intergenic |
| AAGATTCACATGCCACAAAG+AGG | 0.635428 | 4_2:+25976342 | Msa0596220:CDS |
| GCGGAGCCGATGTGAAGGAG+AGG | 0.635436 | 4_2:-25975697 | None:intergenic |
| AGGTGGCTTCGATGATCACG+GGG | 0.636411 | 4_2:-25975677 | None:intergenic |
| AATGAAGTTTGATTCTGAGG+CGG | 0.641025 | 4_2:+25976219 | Msa0596220:CDS |
| GGGTTCGCTCATGACGCTGA+CGG | 0.647156 | 4_2:-25975765 | None:intergenic |
| ATTACCTTGATCAACAACAA+TGG | 0.649121 | 4_2:-25975852 | None:intergenic |
| ATGTCACCCGCGGTTTACGG+CGG | 0.650378 | 4_2:-25976966 | None:intergenic |
| ATCATCAACAACAACAAAGG+AGG | 0.651277 | 4_2:+25977194 | Msa0596220:CDS |
| CATGAACAAAATGTGCAACA+CGG | 0.658217 | 4_2:+25976160 | Msa0596220:CDS |
| TGCCACAAAGAGGGTGTACG+AGG | 0.663321 | 4_2:+25976352 | Msa0596220:CDS |
| ACAGTCACTAAAGTATAGTG+AGG | 0.678827 | 4_2:+25976711 | Msa0596220:CDS |
| CACAAACTAGGGGTGGACAG+CGG | 0.700368 | 4_2:+25976907 | Msa0596220:intron |
| GCTGACGGAGACCAAGAGAG+AGG | 0.702689 | 4_2:-25975750 | None:intergenic |
| GATGACTGTAATGTCACCCG+CGG | 0.723496 | 4_2:-25976976 | None:intergenic |
| AAGCCACCTCTCCTTCACAT+CGG | 0.731352 | 4_2:+25975691 | Msa0596220:CDS |
| GGTGGCTTCGATGATCACGG+GGG | 0.783998 | 4_2:-25975676 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTATTTGAATTTTC+TGG | - | chr4_2:25977110-25977129 | None:intergenic | 10.0% |
| !! | AGAAAATTCAAATAAAAATT+TGG | + | chr4_2:25977109-25977128 | Msa0596220:intron | 10.0% |
| !!! | AAATTTTTATTTGAATTTTC+TGG | - | chr4_2:25977110-25977129 | None:intergenic | 10.0% |
| !! | AGAAAATTCAAATAAAAATT+TGG | + | chr4_2:25977109-25977128 | Msa0596220:intron | 10.0% |
| !!! | TATACATATATATAGCTTTA+TGG | + | chr4_2:25975990-25976009 | Msa0596220:intron | 15.0% |
| !! | AAAACCAAAATTTACAATTA+AGG | - | chr4_2:25976106-25976125 | None:intergenic | 15.0% |
| !!! | CAAATAACAAATATATTTTG+AGG | + | chr4_2:25976814-25976833 | Msa0596220:intron | 15.0% |
| !!! | TATACATATATATAGCTTTA+TGG | + | chr4_2:25975990-25976009 | Msa0596220:intron | 15.0% |
| !! | AAAACCAAAATTTACAATTA+AGG | - | chr4_2:25976106-25976125 | None:intergenic | 15.0% |
| !!! | CAAATAACAAATATATTTTG+AGG | + | chr4_2:25976814-25976833 | Msa0596220:intron | 15.0% |
| !! | GACAAATAATAAAATAGAGA+AGG | - | chr4_2:25975886-25975905 | None:intergenic | 20.0% |
| !!! | TTGATGAAAAATTAGTTTCT+AGG | + | chr4_2:25975938-25975957 | Msa0596220:intron | 20.0% |
| !! | AATGAGTATAGTAAAAGAAT+TGG | + | chr4_2:25976259-25976278 | Msa0596220:CDS | 20.0% |
| !! | TATAGTAAAAGAATTGGATT+TGG | + | chr4_2:25976265-25976284 | Msa0596220:CDS | 20.0% |
| !!! | ATATATTCATGCAAATCTTT+TGG | - | chr4_2:25976613-25976632 | None:intergenic | 20.0% |
| !!! | TATTTTGTATACACTTAAAC+CGG | - | chr4_2:25977077-25977096 | None:intergenic | 20.0% |
| !! | GACAAATAATAAAATAGAGA+AGG | - | chr4_2:25975886-25975905 | None:intergenic | 20.0% |
| !!! | TTGATGAAAAATTAGTTTCT+AGG | + | chr4_2:25975938-25975957 | Msa0596220:intron | 20.0% |
| !! | AATGAGTATAGTAAAAGAAT+TGG | + | chr4_2:25976259-25976278 | Msa0596220:CDS | 20.0% |
| !! | TATAGTAAAAGAATTGGATT+TGG | + | chr4_2:25976265-25976284 | Msa0596220:CDS | 20.0% |
| !!! | ATATATTCATGCAAATCTTT+TGG | - | chr4_2:25976613-25976632 | None:intergenic | 20.0% |
| !!! | TATTTTGTATACACTTAAAC+CGG | - | chr4_2:25977077-25977096 | None:intergenic | 20.0% |
| ! | ATGTATGAAATCATCACTTA+TGG | + | chr4_2:25976077-25976096 | Msa0596220:intron | 25.0% |
| ! | TTCAGATTGTGTCAATAAAT+TGG | + | chr4_2:25976126-25976145 | Msa0596220:intron | 25.0% |
| ! | GTTCTATTATGACTTTCAAA+TGG | + | chr4_2:25976780-25976799 | Msa0596220:intron | 25.0% |
| ! | TGCGTAAAAAATTTGAAAGA+AGG | + | chr4_2:25976872-25976891 | Msa0596220:intron | 25.0% |
| ! | ATGTATGAAATCATCACTTA+TGG | + | chr4_2:25976077-25976096 | Msa0596220:intron | 25.0% |
| ! | TTCAGATTGTGTCAATAAAT+TGG | + | chr4_2:25976126-25976145 | Msa0596220:intron | 25.0% |
| ! | GTTCTATTATGACTTTCAAA+TGG | + | chr4_2:25976780-25976799 | Msa0596220:intron | 25.0% |
| ! | TGCGTAAAAAATTTGAAAGA+AGG | + | chr4_2:25976872-25976891 | Msa0596220:intron | 25.0% |
| ATTACCTTGATCAACAACAA+TGG | - | chr4_2:25975855-25975874 | None:intergenic | 30.0% | |
| TATGAAATCATCACTTATGG+TGG | + | chr4_2:25976080-25976099 | Msa0596220:intron | 30.0% | |
| !! | GTGGCCTTAATTGTAAATTT+TGG | + | chr4_2:25976099-25976118 | Msa0596220:intron | 30.0% |
| TGAAAGTCATAATAGAACGA+GGG | - | chr4_2:25976778-25976797 | None:intergenic | 30.0% | |
| TTGAAAGTCATAATAGAACG+AGG | - | chr4_2:25976779-25976798 | None:intergenic | 30.0% | |
| GATATTCTTCATATTCCTCT+TGG | - | chr4_2:25976844-25976863 | None:intergenic | 30.0% | |
| AACATCATCAACAACAACAA+AGG | + | chr4_2:25977191-25977210 | Msa0596220:CDS | 30.0% | |
| ATTACCTTGATCAACAACAA+TGG | - | chr4_2:25975855-25975874 | None:intergenic | 30.0% | |
| TATGAAATCATCACTTATGG+TGG | + | chr4_2:25976080-25976099 | Msa0596220:intron | 30.0% | |
| !! | GTGGCCTTAATTGTAAATTT+TGG | + | chr4_2:25976099-25976118 | Msa0596220:intron | 30.0% |
| TGAAAGTCATAATAGAACGA+GGG | - | chr4_2:25976778-25976797 | None:intergenic | 30.0% | |
| TTGAAAGTCATAATAGAACG+AGG | - | chr4_2:25976779-25976798 | None:intergenic | 30.0% | |
| GATATTCTTCATATTCCTCT+TGG | - | chr4_2:25976844-25976863 | None:intergenic | 30.0% | |
| AACATCATCAACAACAACAA+AGG | + | chr4_2:25977191-25977210 | Msa0596220:CDS | 30.0% | |
| CATGAACAAAATGTGCAACA+CGG | + | chr4_2:25976160-25976179 | Msa0596220:CDS | 35.0% | |
| TCAAACTTCATTTCCAAGTG+AGG | - | chr4_2:25976211-25976230 | None:intergenic | 35.0% | |
| GGAAATGAAGTTTGATTCTG+AGG | + | chr4_2:25976216-25976235 | Msa0596220:CDS | 35.0% | |
| ! | AATGAAGTTTGATTCTGAGG+CGG | + | chr4_2:25976219-25976238 | Msa0596220:CDS | 35.0% |
| TTTGGTATTCGTCGAGAATA+TGG | + | chr4_2:25976283-25976302 | Msa0596220:CDS | 35.0% | |
| GGAAATAAAAGCAGAGTTGA+TGG | + | chr4_2:25976304-25976323 | Msa0596220:CDS | 35.0% | |
| ACAAAAGACGTCAACCAAAA+GGG | + | chr4_2:25976380-25976399 | Msa0596220:CDS | 35.0% | |
| AGAAATTAGAACGGGATGTT+CGG | + | chr4_2:25976414-25976433 | Msa0596220:CDS | 35.0% | |
| ! | GTATGGTTATTTCACTCGAT+CGG | + | chr4_2:25976440-25976459 | Msa0596220:CDS | 35.0% |
| ACAAGCATCACAAATTGTCT+TGG | + | chr4_2:25976567-25976586 | Msa0596220:CDS | 35.0% | |
| CAAGCATCACAAATTGTCTT+GGG | + | chr4_2:25976568-25976587 | Msa0596220:CDS | 35.0% | |
| ATTGTCTTGGGAGATGAATA+TGG | + | chr4_2:25976580-25976599 | Msa0596220:CDS | 35.0% | |
| GAATATATATCCAAGCAAGC+TGG | + | chr4_2:25976625-25976644 | Msa0596220:CDS | 35.0% | |
| TGGTTTCAAGGTAATTCGTA+AGG | - | chr4_2:25976684-25976703 | None:intergenic | 35.0% | |
| CGAATTACCTTGAAACCAAA+AGG | + | chr4_2:25976686-25976705 | Msa0596220:CDS | 35.0% | |
| !!! | ACTGTTTCCTTTTGGTTTCA+AGG | - | chr4_2:25976696-25976715 | None:intergenic | 35.0% |
| ! | CTTTAGTGACTGTTTCCTTT+TGG | - | chr4_2:25976704-25976723 | None:intergenic | 35.0% |
| ACAGTCACTAAAGTATAGTG+AGG | + | chr4_2:25976711-25976730 | Msa0596220:CDS | 35.0% | |
| TCACTAAAGTATAGTGAGGT+GGG | + | chr4_2:25976715-25976734 | Msa0596220:CDS | 35.0% | |
| !! | ATATTTTGAGGAGTTCCAAG+AGG | + | chr4_2:25976826-25976845 | Msa0596220:intron | 35.0% |
| TTTGTATGCTGTCACAAACT+AGG | + | chr4_2:25976895-25976914 | Msa0596220:intron | 35.0% | |
| TTGTATGCTGTCACAAACTA+GGG | + | chr4_2:25976896-25976915 | Msa0596220:intron | 35.0% | |
| !! | GTTTTCGTCTGTTCTAGATT+CGG | + | chr4_2:25976999-25977018 | Msa0596220:CDS | 35.0% |
| ACCGAAAAAACCGAAATTAC+GGG | - | chr4_2:25977028-25977047 | None:intergenic | 35.0% | |
| CACCGAAAAAACCGAAATTA+CGG | - | chr4_2:25977029-25977048 | None:intergenic | 35.0% | |
| TTTGTATACACTTAAACCGG+CGG | - | chr4_2:25977074-25977093 | None:intergenic | 35.0% | |
| ! | AAAGTCTAGTGATCTAGAAC+TGG | + | chr4_2:25977155-25977174 | Msa0596220:CDS | 35.0% |
| ATCATCAACAACAACAAAGG+AGG | + | chr4_2:25977194-25977213 | Msa0596220:CDS | 35.0% | |
| AACAACAAAGGAGGTTTATG+TGG | + | chr4_2:25977203-25977222 | Msa0596220:CDS | 35.0% | |
| ACAACAAAGGAGGTTTATGT+GGG | + | chr4_2:25977204-25977223 | Msa0596220:CDS | 35.0% | |
| TTATGTGGGAATGGGAATAA+AGG | + | chr4_2:25977218-25977237 | Msa0596220:CDS | 35.0% | |
| GAAGAAGAAAGAGTTGAGAT+CGG | + | chr4_2:25977249-25977268 | Msa0596220:CDS | 35.0% | |
| CATGAACAAAATGTGCAACA+CGG | + | chr4_2:25976160-25976179 | Msa0596220:CDS | 35.0% | |
| TCAAACTTCATTTCCAAGTG+AGG | - | chr4_2:25976211-25976230 | None:intergenic | 35.0% | |
| GGAAATGAAGTTTGATTCTG+AGG | + | chr4_2:25976216-25976235 | Msa0596220:CDS | 35.0% | |
| ! | AATGAAGTTTGATTCTGAGG+CGG | + | chr4_2:25976219-25976238 | Msa0596220:CDS | 35.0% |
| TTTGGTATTCGTCGAGAATA+TGG | + | chr4_2:25976283-25976302 | Msa0596220:CDS | 35.0% | |
| GGAAATAAAAGCAGAGTTGA+TGG | + | chr4_2:25976304-25976323 | Msa0596220:CDS | 35.0% | |
| ACAAAAGACGTCAACCAAAA+GGG | + | chr4_2:25976380-25976399 | Msa0596220:CDS | 35.0% | |
| AGAAATTAGAACGGGATGTT+CGG | + | chr4_2:25976414-25976433 | Msa0596220:CDS | 35.0% | |
| ! | GTATGGTTATTTCACTCGAT+CGG | + | chr4_2:25976440-25976459 | Msa0596220:CDS | 35.0% |
| ACAAGCATCACAAATTGTCT+TGG | + | chr4_2:25976567-25976586 | Msa0596220:CDS | 35.0% | |
| CAAGCATCACAAATTGTCTT+GGG | + | chr4_2:25976568-25976587 | Msa0596220:CDS | 35.0% | |
| ATTGTCTTGGGAGATGAATA+TGG | + | chr4_2:25976580-25976599 | Msa0596220:CDS | 35.0% | |
| GAATATATATCCAAGCAAGC+TGG | + | chr4_2:25976625-25976644 | Msa0596220:CDS | 35.0% | |
| TGGTTTCAAGGTAATTCGTA+AGG | - | chr4_2:25976684-25976703 | None:intergenic | 35.0% | |
| CGAATTACCTTGAAACCAAA+AGG | + | chr4_2:25976686-25976705 | Msa0596220:CDS | 35.0% | |
| !!! | ACTGTTTCCTTTTGGTTTCA+AGG | - | chr4_2:25976696-25976715 | None:intergenic | 35.0% |
| ! | CTTTAGTGACTGTTTCCTTT+TGG | - | chr4_2:25976704-25976723 | None:intergenic | 35.0% |
| ACAGTCACTAAAGTATAGTG+AGG | + | chr4_2:25976711-25976730 | Msa0596220:CDS | 35.0% | |
| TCACTAAAGTATAGTGAGGT+GGG | + | chr4_2:25976715-25976734 | Msa0596220:CDS | 35.0% | |
| !! | ATATTTTGAGGAGTTCCAAG+AGG | + | chr4_2:25976826-25976845 | Msa0596220:intron | 35.0% |
| TTTGTATGCTGTCACAAACT+AGG | + | chr4_2:25976895-25976914 | Msa0596220:intron | 35.0% | |
| TTGTATGCTGTCACAAACTA+GGG | + | chr4_2:25976896-25976915 | Msa0596220:intron | 35.0% | |
| !! | GTTTTCGTCTGTTCTAGATT+CGG | + | chr4_2:25976999-25977018 | Msa0596220:CDS | 35.0% |
| ACCGAAAAAACCGAAATTAC+GGG | - | chr4_2:25977028-25977047 | None:intergenic | 35.0% | |
| CACCGAAAAAACCGAAATTA+CGG | - | chr4_2:25977029-25977048 | None:intergenic | 35.0% | |
| TTTGTATACACTTAAACCGG+CGG | - | chr4_2:25977074-25977093 | None:intergenic | 35.0% | |
| ! | AAAGTCTAGTGATCTAGAAC+TGG | + | chr4_2:25977155-25977174 | Msa0596220:CDS | 35.0% |
| ATCATCAACAACAACAAAGG+AGG | + | chr4_2:25977194-25977213 | Msa0596220:CDS | 35.0% | |
| AACAACAAAGGAGGTTTATG+TGG | + | chr4_2:25977203-25977222 | Msa0596220:CDS | 35.0% | |
| ACAACAAAGGAGGTTTATGT+GGG | + | chr4_2:25977204-25977223 | Msa0596220:CDS | 35.0% | |
| TTATGTGGGAATGGGAATAA+AGG | + | chr4_2:25977218-25977237 | Msa0596220:CDS | 35.0% | |
| GAAGAAGAAAGAGTTGAGAT+CGG | + | chr4_2:25977249-25977268 | Msa0596220:CDS | 35.0% | |
| TTGATCAACAACAATGGCAG+CGG | - | chr4_2:25975849-25975868 | None:intergenic | 40.0% | |
| GGTCACTATGTGTGTAACTT+CGG | + | chr4_2:25976011-25976030 | Msa0596220:intron | 40.0% | |
| AAGATTCACATGCCACAAAG+AGG | + | chr4_2:25976342-25976361 | Msa0596220:CDS | 40.0% | |
| AGATTCACATGCCACAAAGA+GGG | + | chr4_2:25976343-25976362 | Msa0596220:CDS | 40.0% | |
| GACAAAAGACGTCAACCAAA+AGG | + | chr4_2:25976379-25976398 | Msa0596220:CDS | 40.0% | |
| CAAAAGACGTCAACCAAAAG+GGG | + | chr4_2:25976381-25976400 | Msa0596220:CDS | 40.0% | |
| GCCTAGAGCAGAAATTAGAA+CGG | + | chr4_2:25976405-25976424 | Msa0596220:CDS | 40.0% | |
| CCTAGAGCAGAAATTAGAAC+GGG | + | chr4_2:25976406-25976425 | Msa0596220:CDS | 40.0% | |
| CGAATCATATGAACATGCTC+AGG | - | chr4_2:25976523-25976542 | None:intergenic | 40.0% | |
| TATATATCCAAGCAAGCTGG+TGG | + | chr4_2:25976628-25976647 | Msa0596220:CDS | 40.0% | |
| GTCACTAAAGTATAGTGAGG+TGG | + | chr4_2:25976714-25976733 | Msa0596220:CDS | 40.0% | |
| TGTATGCTGTCACAAACTAG+GGG | + | chr4_2:25976897-25976916 | Msa0596220:intron | 40.0% | |
| CCGAAAAAACCGAAATTACG+GGG | - | chr4_2:25977027-25977046 | None:intergenic | 40.0% | |
| !!! | CCCCGTAATTTCGGTTTTTT+CGG | + | chr4_2:25977024-25977043 | Msa0596220:CDS | 40.0% |
| !!! | TTCGGTTTTTTCGGTGTGAA+TGG | + | chr4_2:25977033-25977052 | Msa0596220:CDS | 40.0% |
| !!! | GTTTTTTCGGTGTGAATGGT+CGG | + | chr4_2:25977037-25977056 | Msa0596220:CDS | 40.0% |
| !!! | TTTTTTCGGTGTGAATGGTC+GGG | + | chr4_2:25977038-25977057 | Msa0596220:CDS | 40.0% |
| ! | TAGTGATCTAGAACTGGATC+TGG | + | chr4_2:25977161-25977180 | Msa0596220:CDS | 40.0% |
| AAAGGAGGTTTATGTGGGAA+TGG | + | chr4_2:25977209-25977228 | Msa0596220:CDS | 40.0% | |
| AAGGAGGTTTATGTGGGAAT+GGG | + | chr4_2:25977210-25977229 | Msa0596220:CDS | 40.0% | |
| TTGATCAACAACAATGGCAG+CGG | - | chr4_2:25975849-25975868 | None:intergenic | 40.0% | |
| GGTCACTATGTGTGTAACTT+CGG | + | chr4_2:25976011-25976030 | Msa0596220:intron | 40.0% | |
| AAGATTCACATGCCACAAAG+AGG | + | chr4_2:25976342-25976361 | Msa0596220:CDS | 40.0% | |
| AGATTCACATGCCACAAAGA+GGG | + | chr4_2:25976343-25976362 | Msa0596220:CDS | 40.0% | |
| GACAAAAGACGTCAACCAAA+AGG | + | chr4_2:25976379-25976398 | Msa0596220:CDS | 40.0% | |
| CAAAAGACGTCAACCAAAAG+GGG | + | chr4_2:25976381-25976400 | Msa0596220:CDS | 40.0% | |
| GCCTAGAGCAGAAATTAGAA+CGG | + | chr4_2:25976405-25976424 | Msa0596220:CDS | 40.0% | |
| CCTAGAGCAGAAATTAGAAC+GGG | + | chr4_2:25976406-25976425 | Msa0596220:CDS | 40.0% | |
| CGAATCATATGAACATGCTC+AGG | - | chr4_2:25976523-25976542 | None:intergenic | 40.0% | |
| TATATATCCAAGCAAGCTGG+TGG | + | chr4_2:25976628-25976647 | Msa0596220:CDS | 40.0% | |
| GTCACTAAAGTATAGTGAGG+TGG | + | chr4_2:25976714-25976733 | Msa0596220:CDS | 40.0% | |
| TGTATGCTGTCACAAACTAG+GGG | + | chr4_2:25976897-25976916 | Msa0596220:intron | 40.0% | |
| CCGAAAAAACCGAAATTACG+GGG | - | chr4_2:25977027-25977046 | None:intergenic | 40.0% | |
| !!! | CCCCGTAATTTCGGTTTTTT+CGG | + | chr4_2:25977024-25977043 | Msa0596220:CDS | 40.0% |
| !!! | TTCGGTTTTTTCGGTGTGAA+TGG | + | chr4_2:25977033-25977052 | Msa0596220:CDS | 40.0% |
| !!! | GTTTTTTCGGTGTGAATGGT+CGG | + | chr4_2:25977037-25977056 | Msa0596220:CDS | 40.0% |
| !!! | TTTTTTCGGTGTGAATGGTC+GGG | + | chr4_2:25977038-25977057 | Msa0596220:CDS | 40.0% |
| ! | TAGTGATCTAGAACTGGATC+TGG | + | chr4_2:25977161-25977180 | Msa0596220:CDS | 40.0% |
| AAAGGAGGTTTATGTGGGAA+TGG | + | chr4_2:25977209-25977228 | Msa0596220:CDS | 40.0% | |
| AAGGAGGTTTATGTGGGAAT+GGG | + | chr4_2:25977210-25977229 | Msa0596220:CDS | 40.0% | |
| GGTGGAAAGTTGTCTGAGAA+AGG | - | chr4_2:25975651-25975670 | None:intergenic | 45.0% | |
| !! | AGTGTTGGTAGCAGGATGAT+GGG | - | chr4_2:25975789-25975808 | None:intergenic | 45.0% |
| !! | TAGTGTTGGTAGCAGGATGA+TGG | - | chr4_2:25975790-25975809 | None:intergenic | 45.0% |
| ! | GCTGCCATTGTTGTTGATCA+AGG | + | chr4_2:25975848-25975867 | Msa0596220:CDS | 45.0% |
| CAAAATGTGCAACACGGACT+AGG | + | chr4_2:25976166-25976185 | Msa0596220:CDS | 45.0% | |
| TGCGAACAATGTACCTCACT+TGG | + | chr4_2:25976195-25976214 | Msa0596220:CDS | 45.0% | |
| CCCGTTCTAATTTCTGCTCT+AGG | - | chr4_2:25976409-25976428 | None:intergenic | 45.0% | |
| !! | GAACATGCTCAGGTTGAAGT+TGG | - | chr4_2:25976513-25976532 | None:intergenic | 45.0% |
| ! | TTTACGGCGGAATGAGGTTT+TGG | - | chr4_2:25976956-25976975 | None:intergenic | 45.0% |
| ! | GATTCGGTTCCCCGTAATTT+CGG | + | chr4_2:25977015-25977034 | Msa0596220:CDS | 45.0% |
| GAAGAAAGAGTTGAGATCGG+TGG | + | chr4_2:25977252-25977271 | Msa0596220:CDS | 45.0% | |
| GGTGGAAAGTTGTCTGAGAA+AGG | - | chr4_2:25975651-25975670 | None:intergenic | 45.0% | |
| !! | AGTGTTGGTAGCAGGATGAT+GGG | - | chr4_2:25975789-25975808 | None:intergenic | 45.0% |
| !! | TAGTGTTGGTAGCAGGATGA+TGG | - | chr4_2:25975790-25975809 | None:intergenic | 45.0% |
| ! | GCTGCCATTGTTGTTGATCA+AGG | + | chr4_2:25975848-25975867 | Msa0596220:CDS | 45.0% |
| CAAAATGTGCAACACGGACT+AGG | + | chr4_2:25976166-25976185 | Msa0596220:CDS | 45.0% | |
| TGCGAACAATGTACCTCACT+TGG | + | chr4_2:25976195-25976214 | Msa0596220:CDS | 45.0% | |
| CCCGTTCTAATTTCTGCTCT+AGG | - | chr4_2:25976409-25976428 | None:intergenic | 45.0% | |
| !! | GAACATGCTCAGGTTGAAGT+TGG | - | chr4_2:25976513-25976532 | None:intergenic | 45.0% |
| ! | TTTACGGCGGAATGAGGTTT+TGG | - | chr4_2:25976956-25976975 | None:intergenic | 45.0% |
| ! | GATTCGGTTCCCCGTAATTT+CGG | + | chr4_2:25977015-25977034 | Msa0596220:CDS | 45.0% |
| GAAGAAAGAGTTGAGATCGG+TGG | + | chr4_2:25977252-25977271 | Msa0596220:CDS | 45.0% | |
| AGAGGTGGCTTCGATGATCA+CGG | - | chr4_2:25975682-25975701 | None:intergenic | 50.0% | |
| AAGCCACCTCTCCTTCACAT+CGG | + | chr4_2:25975691-25975710 | Msa0596220:CDS | 50.0% | |
| !! | GTGTTGGTAGCAGGATGATG+GGG | - | chr4_2:25975788-25975807 | None:intergenic | 50.0% |
| !! | GGTTCGTTAGTGTTGGTAGC+AGG | - | chr4_2:25975797-25975816 | None:intergenic | 50.0% |
| !! | GAAGTTTGATTCTGAGGCGG+CGG | + | chr4_2:25976222-25976241 | Msa0596220:CDS | 50.0% |
| !! | CATGCTCAGGTTGAAGTTGG+TGG | - | chr4_2:25976510-25976529 | None:intergenic | 50.0% |
| ! | CTGTATTCCACCAGCTTGCT+TGG | - | chr4_2:25976638-25976657 | None:intergenic | 50.0% |
| GCTGGTGGAATACAGACAGT+TGG | + | chr4_2:25976643-25976662 | Msa0596220:CDS | 50.0% | |
| ATGCTGTCACAAACTAGGGG+TGG | + | chr4_2:25976900-25976919 | Msa0596220:intron | 50.0% | |
| GTAATGTCACCCGCGGTTTA+CGG | - | chr4_2:25976972-25976991 | None:intergenic | 50.0% | |
| GATGACTGTAATGTCACCCG+CGG | - | chr4_2:25976979-25976998 | None:intergenic | 50.0% | |
| AGAGGTGGCTTCGATGATCA+CGG | - | chr4_2:25975682-25975701 | None:intergenic | 50.0% | |
| AAGCCACCTCTCCTTCACAT+CGG | + | chr4_2:25975691-25975710 | Msa0596220:CDS | 50.0% | |
| !! | GTGTTGGTAGCAGGATGATG+GGG | - | chr4_2:25975788-25975807 | None:intergenic | 50.0% |
| !! | GGTTCGTTAGTGTTGGTAGC+AGG | - | chr4_2:25975797-25975816 | None:intergenic | 50.0% |
| !! | GAAGTTTGATTCTGAGGCGG+CGG | + | chr4_2:25976222-25976241 | Msa0596220:CDS | 50.0% |
| !! | CATGCTCAGGTTGAAGTTGG+TGG | - | chr4_2:25976510-25976529 | None:intergenic | 50.0% |
| ! | CTGTATTCCACCAGCTTGCT+TGG | - | chr4_2:25976638-25976657 | None:intergenic | 50.0% |
| GCTGGTGGAATACAGACAGT+TGG | + | chr4_2:25976643-25976662 | Msa0596220:CDS | 50.0% | |
| ATGCTGTCACAAACTAGGGG+TGG | + | chr4_2:25976900-25976919 | Msa0596220:intron | 50.0% | |
| GTAATGTCACCCGCGGTTTA+CGG | - | chr4_2:25976972-25976991 | None:intergenic | 50.0% | |
| GATGACTGTAATGTCACCCG+CGG | - | chr4_2:25976979-25976998 | None:intergenic | 50.0% | |
| AGGTGGCTTCGATGATCACG+GGG | - | chr4_2:25975680-25975699 | None:intergenic | 55.0% | |
| GAGGTGGCTTCGATGATCAC+GGG | - | chr4_2:25975681-25975700 | None:intergenic | 55.0% | |
| CGAGAGAGAAGGAGAGGTGA+CGG | - | chr4_2:25975722-25975741 | None:intergenic | 55.0% | |
| ! | AGACCAAGAGAGAGGTGCAG+CGG | - | chr4_2:25975745-25975764 | None:intergenic | 55.0% |
| ! | TGCCACAAAGAGGGTGTACG+AGG | + | chr4_2:25976352-25976371 | Msa0596220:CDS | 55.0% |
| CACCTCGTACACCCTCTTTG+TGG | - | chr4_2:25976357-25976376 | None:intergenic | 55.0% | |
| !! | TCTGCTCTAGGCTCCCCTTT+TGG | - | chr4_2:25976397-25976416 | None:intergenic | 55.0% |
| CACAAACTAGGGGTGGACAG+CGG | + | chr4_2:25976907-25976926 | Msa0596220:intron | 55.0% | |
| !! | GAGGTTTTGGCCCCGAAAAC+CGG | - | chr4_2:25976943-25976962 | None:intergenic | 55.0% |
| ! | TTTCGGTGTGAATGGTCGGG+TGG | + | chr4_2:25977041-25977060 | Msa0596220:CDS | 55.0% |
| ! | TTCGGTGTGAATGGTCGGGT+GGG | + | chr4_2:25977042-25977061 | Msa0596220:CDS | 55.0% |
| TTGAGATCGGTGGAGCTGAG+TGG | + | chr4_2:25977262-25977281 | Msa0596220:CDS | 55.0% | |
| AGGTGGCTTCGATGATCACG+GGG | - | chr4_2:25975680-25975699 | None:intergenic | 55.0% | |
| GAGGTGGCTTCGATGATCAC+GGG | - | chr4_2:25975681-25975700 | None:intergenic | 55.0% | |
| CGAGAGAGAAGGAGAGGTGA+CGG | - | chr4_2:25975722-25975741 | None:intergenic | 55.0% | |
| ! | AGACCAAGAGAGAGGTGCAG+CGG | - | chr4_2:25975745-25975764 | None:intergenic | 55.0% |
| ! | TGCCACAAAGAGGGTGTACG+AGG | + | chr4_2:25976352-25976371 | Msa0596220:CDS | 55.0% |
| CACCTCGTACACCCTCTTTG+TGG | - | chr4_2:25976357-25976376 | None:intergenic | 55.0% | |
| !! | TCTGCTCTAGGCTCCCCTTT+TGG | - | chr4_2:25976397-25976416 | None:intergenic | 55.0% |
| CACAAACTAGGGGTGGACAG+CGG | + | chr4_2:25976907-25976926 | Msa0596220:intron | 55.0% | |
| !! | GAGGTTTTGGCCCCGAAAAC+CGG | - | chr4_2:25976943-25976962 | None:intergenic | 55.0% |
| ! | TTTCGGTGTGAATGGTCGGG+TGG | + | chr4_2:25977041-25977060 | Msa0596220:CDS | 55.0% |
| ! | TTCGGTGTGAATGGTCGGGT+GGG | + | chr4_2:25977042-25977061 | Msa0596220:CDS | 55.0% |
| TTGAGATCGGTGGAGCTGAG+TGG | + | chr4_2:25977262-25977281 | Msa0596220:CDS | 55.0% | |
| ATGATCACGGGGGAGGAAGG+TGG | - | chr4_2:25975669-25975688 | None:intergenic | 60.0% | |
| TCGATGATCACGGGGGAGGA+AGG | - | chr4_2:25975672-25975691 | None:intergenic | 60.0% | |
| GGTGGCTTCGATGATCACGG+GGG | - | chr4_2:25975679-25975698 | None:intergenic | 60.0% | |
| GAGCCGATGTGAAGGAGAGG+TGG | - | chr4_2:25975697-25975716 | None:intergenic | 60.0% | |
| ! | GAGAGAAGGAGAGGTGACGG+CGG | - | chr4_2:25975719-25975738 | None:intergenic | 60.0% |
| GCTGACGGAGACCAAGAGAG+AGG | - | chr4_2:25975753-25975772 | None:intergenic | 60.0% | |
| GGGTTCGCTCATGACGCTGA+CGG | - | chr4_2:25975768-25975787 | None:intergenic | 60.0% | |
| ! | GGCGACGGGTTCGTTAGTGT+TGG | - | chr4_2:25975804-25975823 | None:intergenic | 60.0% |
| GCTAGAATGGTCGGAGACGG+CGG | - | chr4_2:25975825-25975844 | None:intergenic | 60.0% | |
| GGCGCTAGAATGGTCGGAGA+CGG | - | chr4_2:25975828-25975847 | None:intergenic | 60.0% | |
| CAATGGCAGCGGCGCTAGAA+TGG | - | chr4_2:25975838-25975857 | None:intergenic | 60.0% | |
| AACGGGATGTTCGGCGCGTA+TGG | + | chr4_2:25976423-25976442 | Msa0596220:CDS | 60.0% | |
| AACTAGGGGTGGACAGCGGA+CGG | + | chr4_2:25976911-25976930 | Msa0596220:intron | 60.0% | |
| !! | GGACGGTTTCGGCCGGTTTT+CGG | + | chr4_2:25976928-25976947 | Msa0596220:CDS | 60.0% |
| !! | GACGGTTTCGGCCGGTTTTC+GGG | + | chr4_2:25976929-25976948 | Msa0596220:CDS | 60.0% |
| !! | ACGGTTTCGGCCGGTTTTCG+GGG | + | chr4_2:25976930-25976949 | Msa0596220:CDS | 60.0% |
| CCTCATTCCGCCGTAAACCG+CGG | + | chr4_2:25976959-25976978 | Msa0596220:CDS | 60.0% | |
| CTCATTCCGCCGTAAACCGC+GGG | + | chr4_2:25976960-25976979 | Msa0596220:CDS | 60.0% | |
| ATGTCACCCGCGGTTTACGG+CGG | - | chr4_2:25976969-25976988 | None:intergenic | 60.0% | |
| ATGATCACGGGGGAGGAAGG+TGG | - | chr4_2:25975669-25975688 | None:intergenic | 60.0% | |
| TCGATGATCACGGGGGAGGA+AGG | - | chr4_2:25975672-25975691 | None:intergenic | 60.0% | |
| GGTGGCTTCGATGATCACGG+GGG | - | chr4_2:25975679-25975698 | None:intergenic | 60.0% | |
| GAGCCGATGTGAAGGAGAGG+TGG | - | chr4_2:25975697-25975716 | None:intergenic | 60.0% | |
| ! | GAGAGAAGGAGAGGTGACGG+CGG | - | chr4_2:25975719-25975738 | None:intergenic | 60.0% |
| GCTGACGGAGACCAAGAGAG+AGG | - | chr4_2:25975753-25975772 | None:intergenic | 60.0% | |
| GGGTTCGCTCATGACGCTGA+CGG | - | chr4_2:25975768-25975787 | None:intergenic | 60.0% | |
| ! | GGCGACGGGTTCGTTAGTGT+TGG | - | chr4_2:25975804-25975823 | None:intergenic | 60.0% |
| GCTAGAATGGTCGGAGACGG+CGG | - | chr4_2:25975825-25975844 | None:intergenic | 60.0% | |
| GGCGCTAGAATGGTCGGAGA+CGG | - | chr4_2:25975828-25975847 | None:intergenic | 60.0% | |
| CAATGGCAGCGGCGCTAGAA+TGG | - | chr4_2:25975838-25975857 | None:intergenic | 60.0% | |
| AACGGGATGTTCGGCGCGTA+TGG | + | chr4_2:25976423-25976442 | Msa0596220:CDS | 60.0% | |
| AACTAGGGGTGGACAGCGGA+CGG | + | chr4_2:25976911-25976930 | Msa0596220:intron | 60.0% | |
| !! | GGACGGTTTCGGCCGGTTTT+CGG | + | chr4_2:25976928-25976947 | Msa0596220:CDS | 60.0% |
| !! | GACGGTTTCGGCCGGTTTTC+GGG | + | chr4_2:25976929-25976948 | Msa0596220:CDS | 60.0% |
| !! | ACGGTTTCGGCCGGTTTTCG+GGG | + | chr4_2:25976930-25976949 | Msa0596220:CDS | 60.0% |
| CCTCATTCCGCCGTAAACCG+CGG | + | chr4_2:25976959-25976978 | Msa0596220:CDS | 60.0% | |
| CTCATTCCGCCGTAAACCGC+GGG | + | chr4_2:25976960-25976979 | Msa0596220:CDS | 60.0% | |
| ATGTCACCCGCGGTTTACGG+CGG | - | chr4_2:25976969-25976988 | None:intergenic | 60.0% | |
| GGCTTCGATGATCACGGGGG+AGG | - | chr4_2:25975676-25975695 | None:intergenic | 65.0% | |
| GCGGAGCCGATGTGAAGGAG+AGG | - | chr4_2:25975700-25975719 | None:intergenic | 65.0% | |
| TGACGGCGGAGCCGATGTGA+AGG | - | chr4_2:25975705-25975724 | None:intergenic | 65.0% | |
| CAGCGGCGAGAGAGAAGGAG+AGG | - | chr4_2:25975728-25975747 | None:intergenic | 65.0% | |
| AGGTGCAGCGGCGAGAGAGA+AGG | - | chr4_2:25975733-25975752 | None:intergenic | 65.0% | |
| TCGCCGCTGCACCTCTCTCT+TGG | + | chr4_2:25975739-25975758 | Msa0596220:CDS | 65.0% | |
| GGCAGCGGCGCTAGAATGGT+CGG | - | chr4_2:25975834-25975853 | None:intergenic | 65.0% | |
| GGGTGGACAGCGGACGGTTT+CGG | + | chr4_2:25976917-25976936 | Msa0596220:CDS | 65.0% | |
| CCGCGGTTTACGGCGGAATG+AGG | - | chr4_2:25976962-25976981 | None:intergenic | 65.0% | |
| GGTGTGAATGGTCGGGTGGG+CGG | + | chr4_2:25977045-25977064 | Msa0596220:CDS | 65.0% | |
| GGCTTCGATGATCACGGGGG+AGG | - | chr4_2:25975676-25975695 | None:intergenic | 65.0% | |
| GCGGAGCCGATGTGAAGGAG+AGG | - | chr4_2:25975700-25975719 | None:intergenic | 65.0% | |
| TGACGGCGGAGCCGATGTGA+AGG | - | chr4_2:25975705-25975724 | None:intergenic | 65.0% | |
| CAGCGGCGAGAGAGAAGGAG+AGG | - | chr4_2:25975728-25975747 | None:intergenic | 65.0% | |
| AGGTGCAGCGGCGAGAGAGA+AGG | - | chr4_2:25975733-25975752 | None:intergenic | 65.0% | |
| TCGCCGCTGCACCTCTCTCT+TGG | + | chr4_2:25975739-25975758 | Msa0596220:CDS | 65.0% | |
| GGCAGCGGCGCTAGAATGGT+CGG | - | chr4_2:25975834-25975853 | None:intergenic | 65.0% | |
| GGGTGGACAGCGGACGGTTT+CGG | + | chr4_2:25976917-25976936 | Msa0596220:CDS | 65.0% | |
| CCGCGGTTTACGGCGGAATG+AGG | - | chr4_2:25976962-25976981 | None:intergenic | 65.0% | |
| GGTGTGAATGGTCGGGTGGG+CGG | + | chr4_2:25977045-25977064 | Msa0596220:CDS | 65.0% | |
| ATGGTCGGAGACGGCGGCGA+CGG | - | chr4_2:25975819-25975838 | None:intergenic | 70.0% | |
| GGACAGCGGACGGTTTCGGC+CGG | + | chr4_2:25976921-25976940 | Msa0596220:CDS | 70.0% | |
| ATGGTCGGAGACGGCGGCGA+CGG | - | chr4_2:25975819-25975838 | None:intergenic | 70.0% | |
| GGACAGCGGACGGTTTCGGC+CGG | + | chr4_2:25976921-25976940 | Msa0596220:CDS | 70.0% | |
| TGGTCGGAGACGGCGGCGAC+GGG | - | chr4_2:25975818-25975837 | None:intergenic | 75.0% | |
| GTCGGGTGGGCGGTTTCCGC+CGG | + | chr4_2:25977055-25977074 | Msa0596220:intron | 75.0% | |
| TGGTCGGAGACGGCGGCGAC+GGG | - | chr4_2:25975818-25975837 | None:intergenic | 75.0% | |
| GTCGGGTGGGCGGTTTCCGC+CGG | + | chr4_2:25977055-25977074 | Msa0596220:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 25975620 | 25977314 | 25975620 | ID=Msa0596220;Name=Msa0596220 |
| chr4_2 | mRNA | 25975620 | 25977314 | 25975620 | ID=Msa0596220-mRNA-1;Parent=Msa0596220;Name=Msa0596220-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|0.5|1|1|4|0|388 |
| chr4_2 | exon | 25975620 | 25975869 | 25975620 | ID=Msa0596220-mRNA-1:exon:6993;Parent=Msa0596220-mRNA-1 |
| chr4_2 | exon | 25976131 | 25976736 | 25976131 | ID=Msa0596220-mRNA-1:exon:6994;Parent=Msa0596220-mRNA-1 |
| chr4_2 | exon | 25976917 | 25977066 | 25976917 | ID=Msa0596220-mRNA-1:exon:6995;Parent=Msa0596220-mRNA-1 |
| chr4_2 | exon | 25977154 | 25977314 | 25977154 | ID=Msa0596220-mRNA-1:exon:6996;Parent=Msa0596220-mRNA-1 |
| chr4_2 | CDS | 25975620 | 25975869 | 25975620 | ID=Msa0596220-mRNA-1:cds;Parent=Msa0596220-mRNA-1 |
| chr4_2 | CDS | 25976131 | 25976736 | 25976131 | ID=Msa0596220-mRNA-1:cds;Parent=Msa0596220-mRNA-1 |
| chr4_2 | CDS | 25976917 | 25977066 | 25976917 | ID=Msa0596220-mRNA-1:cds;Parent=Msa0596220-mRNA-1 |
| chr4_2 | CDS | 25977154 | 25977314 | 25977154 | ID=Msa0596220-mRNA-1:cds;Parent=Msa0596220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
