Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598770 | XP_013442871.1 | 99.582 | 239 | 1 | 0 | 1 | 239 | 1 | 239 | 2.10e-175 | 491 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598770 | sp|Q8GZA8|ULT1_ARATH | 75.330 | 227 | 56 | 0 | 13 | 239 | 11 | 237 | 1.35e-128 | 366 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598770 | A0A072TI70 | 99.582 | 239 | 1 | 0 | 1 | 239 | 1 | 239 | 1.00e-175 | 491 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0598770 | TF | ULT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598770 | MtrunA17_Chr4g0022491 | 99.582 | 239 | 1 | 0 | 1 | 239 | 1 | 239 | 1.93e-179 | 491 |
| Msa0598770 | MtrunA17_Chr2g0323881 | 77.542 | 236 | 53 | 0 | 4 | 239 | 1 | 236 | 1.26e-139 | 390 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598770 | AT4G28190.1 | 75.330 | 227 | 56 | 0 | 13 | 239 | 11 | 237 | 1.37e-129 | 366 |
| Msa0598770 | AT4G28190.2 | 66.279 | 258 | 56 | 1 | 13 | 239 | 11 | 268 | 9.43e-123 | 350 |
| Msa0598770 | AT2G20825.1 | 70.089 | 224 | 61 | 1 | 16 | 239 | 10 | 227 | 2.09e-118 | 337 |
Find 74 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGACCAACCCGGCCATTT+TGG | 0.182520 | 4_2:+36504391 | None:intergenic |
| GAAATGCTTAATTTCCTAAT+TGG | 0.196599 | 4_2:-36502424 | Msa0598770:three_prime_UTR |
| AAACAAATGTTGAGGTTAAA+AGG | 0.209791 | 4_2:+36506746 | None:intergenic |
| AATATCTGGGTTATAATTAA+TGG | 0.255756 | 4_2:-36504495 | Msa0598770:CDS |
| GCACTTCATGTGTGTGCTTT+GGG | 0.312256 | 4_2:-36502600 | Msa0598770:CDS |
| GGAAATGGAAGAATAATATC+TGG | 0.324881 | 4_2:-36504509 | Msa0598770:CDS |
| CTTTCACTGTTCTCATTGAC+TGG | 0.327911 | 4_2:-36502380 | Msa0598770:three_prime_UTR |
| TGCACTTCATGTGTGTGCTT+TGG | 0.329850 | 4_2:-36502601 | Msa0598770:CDS |
| CAGACTGTTGATGTCCAATT+AGG | 0.333052 | 4_2:+36502410 | None:intergenic |
| AATGGGTTGGAGAAGGGAAA+TGG | 0.345803 | 4_2:-36506500 | Msa0598770:CDS |
| GCATTTCTAAAATTCTATAT+AGG | 0.363394 | 4_2:+36502440 | None:intergenic |
| AGGCATAAATAACCAGCTTA+TGG | 0.365789 | 4_2:+36502460 | None:intergenic |
| CCAGCTTATGGAACAAGTAT+TGG | 0.379099 | 4_2:+36502472 | None:intergenic |
| ATGAGTTTGTTCGCTGTACT+AGG | 0.392965 | 4_2:-36504365 | Msa0598770:CDS |
| AACAAATGTTGAGGTTAAAA+GGG | 0.394085 | 4_2:+36506747 | None:intergenic |
| ATGCTGTGTCAGATGCAAAT+TGG | 0.397171 | 4_2:-36504284 | Msa0598770:CDS |
| CCAATACTTGTTCCATAAGC+TGG | 0.409124 | 4_2:-36502472 | Msa0598770:three_prime_UTR |
| GGCTCTCAGAGATCCCAAAA+TGG | 0.420579 | 4_2:-36504405 | Msa0598770:CDS |
| CAGCTTATGGAACAAGTATT+GGG | 0.421823 | 4_2:+36502473 | None:intergenic |
| ATGGGTTGGAGAAGGGAAAT+GGG | 0.422445 | 4_2:-36506499 | Msa0598770:CDS |
| GGTTATAATTAATGGTGATA+AGG | 0.431324 | 4_2:-36504487 | Msa0598770:CDS |
| GAAGAGAGACAGCAAGGAAA+TGG | 0.432232 | 4_2:-36504524 | Msa0598770:CDS |
| GAATAAACGTACTTCTCATA+TGG | 0.434948 | 4_2:+36504246 | None:intergenic |
| CAAGTGGCGAAAGCTGCTAA+TGG | 0.441867 | 4_2:-36504426 | Msa0598770:CDS |
| TTTATGGAGAAAATGGAGAA+TGG | 0.445958 | 4_2:-36506518 | Msa0598770:CDS |
| TTATGGAGAAAATGGAGAAT+GGG | 0.453953 | 4_2:-36506517 | Msa0598770:CDS |
| AAGAGCTGAGAGAAATGAGT+GGG | 0.458242 | 4_2:-36506457 | Msa0598770:CDS |
| TAATGGTGATAAGGTTCCAT+TGG | 0.460779 | 4_2:-36504478 | Msa0598770:CDS |
| CAAAGGGTATAGATATATAG+AGG | 0.471001 | 4_2:+36506596 | None:intergenic |
| TGCACTCCTGGTTGTGATGA+AGG | 0.473540 | 4_2:-36506317 | Msa0598770:intron |
| ATGGAGAATGGGTTGGAGAA+GGG | 0.474047 | 4_2:-36506506 | Msa0598770:CDS |
| TGATGCTGTTGGTAGACTTA+GGG | 0.474100 | 4_2:-36506375 | Msa0598770:CDS |
| AACCTTTGCACGTTGGTGAT+CGG | 0.474249 | 4_2:+36502623 | None:intergenic |
| TGCATTCACAAATAATTTGA+AGG | 0.477500 | 4_2:+36506336 | None:intergenic |
| CTCAGAGATCCCAAAATGGC+CGG | 0.484048 | 4_2:-36504401 | Msa0598770:CDS |
| AATGGTGATAAGGTTCCATT+GGG | 0.489767 | 4_2:-36504477 | Msa0598770:CDS |
| AATGGAGAATGGGTTGGAGA+AGG | 0.494806 | 4_2:-36506507 | Msa0598770:CDS |
| TGGTAAAGTCAGTACAAGTC+TGG | 0.500731 | 4_2:+36502545 | None:intergenic |
| GTGATGCTGTTGGTAGACTT+AGG | 0.502004 | 4_2:-36506376 | Msa0598770:CDS |
| AGAGAAAGTGGTTGGTGATG+AGG | 0.502326 | 4_2:+36506678 | None:intergenic |
| ATTATTTGTGAATGCACTCC+TGG | 0.510243 | 4_2:-36506329 | Msa0598770:CDS |
| GTGTAAAATCAAAGTGCAAA+GGG | 0.523007 | 4_2:+36506580 | None:intergenic |
| GGAGAAAATGGAGAATGGGT+TGG | 0.523981 | 4_2:-36506513 | Msa0598770:CDS |
| ATTTCGTCTGAGATCTAAAG+AGG | 0.537276 | 4_2:-36504325 | Msa0598770:CDS |
| GGCCGATCACCAACGTGCAA+AGG | 0.545531 | 4_2:-36502625 | Msa0598770:CDS |
| AGATCCCAAAATGGCCGGGT+TGG | 0.546651 | 4_2:-36504396 | Msa0598770:CDS |
| GAGTGTTTCTCAAATGCAGC+AGG | 0.552189 | 4_2:+36504549 | None:intergenic |
| TGTAATGTTAATGAATTAGC+TGG | 0.560174 | 4_2:+36506714 | None:intergenic |
| AGTGTAAAATCAAAGTGCAA+AGG | 0.563592 | 4_2:+36506579 | None:intergenic |
| ACACAATGCTGCTGTTGTTG+AGG | 0.565466 | 4_2:+36502497 | None:intergenic |
| TCAGAGATCCCAAAATGGCC+GGG | 0.567774 | 4_2:-36504400 | Msa0598770:CDS |
| CTTATGTAAGACTAGTTGAG+AGG | 0.577266 | 4_2:+36506838 | None:intergenic |
| GAAATGGAAGAATAATATCT+GGG | 0.580008 | 4_2:-36504508 | Msa0598770:CDS |
| CGAAGAGTTTACAGAGGATG+CGG | 0.588649 | 4_2:-36502646 | Msa0598770:CDS |
| GCTGCATTTGAGAAACACTC+TGG | 0.595645 | 4_2:-36504546 | Msa0598770:CDS |
| TTGCATCTGACACAGCATCA+TGG | 0.597955 | 4_2:+36504289 | None:intergenic |
| GGTTGTACTAGTCATAGATA+TGG | 0.606067 | 4_2:-36506398 | Msa0598770:CDS |
| ACTCATCGCGGTGACCAACC+CGG | 0.606791 | 4_2:+36504382 | None:intergenic |
| AGAGCTGAGAGAAATGAGTG+GGG | 0.614369 | 4_2:-36506456 | Msa0598770:CDS |
| CATAGATATGGTGATGCTGT+TGG | 0.619627 | 4_2:-36506386 | Msa0598770:CDS |
| AGGGTATAGATATATAGAGG+AGG | 0.623957 | 4_2:+36506599 | None:intergenic |
| GCTCAAATACTACAATCAAG+TGG | 0.629351 | 4_2:-36504442 | Msa0598770:CDS |
| ACACAGCATCATGGTGAATG+CGG | 0.634639 | 4_2:+36504298 | None:intergenic |
| ACAAATGTTGAGGTTAAAAG+GGG | 0.639985 | 4_2:+36506748 | None:intergenic |
| TGGGTTGTCAATGTTTAGCG+AGG | 0.646931 | 4_2:-36506480 | Msa0598770:CDS |
| GAAGAGCTGAGAGAAATGAG+TGG | 0.646981 | 4_2:-36506458 | Msa0598770:CDS |
| GTATAGCAAAACAAATGTTG+AGG | 0.649997 | 4_2:+36506738 | None:intergenic |
| GGAAGTCGAAGAGTTTACAG+AGG | 0.661639 | 4_2:-36502652 | Msa0598770:CDS |
| ACTCTGGAAGAGAGACAGCA+AGG | 0.669740 | 4_2:-36504530 | Msa0598770:CDS |
| GAGGGACCTTCATCACAACC+AGG | 0.689911 | 4_2:+36506311 | None:intergenic |
| TGTGATGATGAAGAAGAGCG+AGG | 0.697305 | 4_2:-36502673 | Msa0598770:CDS |
| GAATATGTTGAAGTCACGTG+TGG | 0.729873 | 4_2:-36506419 | Msa0598770:CDS |
| GAAGTGCAACCTTTGCACGT+TGG | 0.737286 | 4_2:+36502616 | None:intergenic |
| TACAGCGAACAAACTCATCG+CGG | 0.760016 | 4_2:+36504370 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTATGAAAATTTATAAT+TGG | - | chr4_2:36503222-36503241 | Msa0598770:intron | 10.0% |
| !! | ATAAAATATATAAGAAATTG+AGG | + | chr4_2:36503860-36503879 | None:intergenic | 10.0% |
| !! | AAAACAAAATCATAAATTAT+TGG | + | chr4_2:36504399-36504418 | None:intergenic | 10.0% |
| !!! | AATAATTTATGATTTTGTTT+TGG | - | chr4_2:36504398-36504417 | Msa0598770:CDS | 10.0% |
| !! | TATAATATAATCTTTGAATT+TGG | - | chr4_2:36505280-36505299 | Msa0598770:intron | 10.0% |
| !! | ATAATATAATCTTTGAATTT+GGG | - | chr4_2:36505281-36505300 | Msa0598770:intron | 10.0% |
| !! | TCTTTCAAATTAAATTATGA+AGG | + | chr4_2:36504132-36504151 | None:intergenic | 15.0% |
| !! | ATACATAAACAAATATACAA+TGG | + | chr4_2:36504468-36504487 | None:intergenic | 15.0% |
| !! | TTGTGAGATTAAATTCAATA+TGG | - | chr4_2:36503257-36503276 | Msa0598770:intron | 20.0% |
| !! | TTATAGATTAACAATACCTT+AGG | + | chr4_2:36503425-36503444 | None:intergenic | 20.0% |
| !! | CAAATTAAATTATGAAGGTA+TGG | + | chr4_2:36504127-36504146 | None:intergenic | 20.0% |
| !! | TCAATAATTAGTCATATAGA+CGG | + | chr4_2:36504299-36504318 | None:intergenic | 20.0% |
| !! | ATATGACTAATTATTGAATG+TGG | - | chr4_2:36504302-36504321 | Msa0598770:CDS | 20.0% |
| !! | TATATTTGTTTATGTATCCA+TGG | - | chr4_2:36504471-36504490 | Msa0598770:CDS | 20.0% |
| !!! | ATTATTTTTTCTTTTCACCA+TGG | + | chr4_2:36504491-36504510 | None:intergenic | 20.0% |
| !! | AACATCATATGCAAAAATTA+AGG | + | chr4_2:36504579-36504598 | None:intergenic | 20.0% |
| !! | AATATCTGGGTTATAATTAA+TGG | - | chr4_2:36504675-36504694 | Msa0598770:intron | 20.0% |
| !! | AAAAGACCAAATTTATGAAT+TGG | + | chr4_2:36505434-36505453 | None:intergenic | 20.0% |
| !!! | ATAATTGATAGTCTTAATCT+AGG | - | chr4_2:36505528-36505547 | Msa0598770:intron | 20.0% |
| !! | TATTTCATAAAAACTTCATC+AGG | - | chr4_2:36505599-36505618 | Msa0598770:intron | 20.0% |
| !!! | CATATCATATTACTGTTTTA+CGG | - | chr4_2:36505622-36505641 | Msa0598770:intron | 20.0% |
| !!! | AATCTTTTGCATAAAATTTC+AGG | - | chr4_2:36505740-36505759 | Msa0598770:intron | 20.0% |
| !!! | ATCTTTTGCATAAAATTTCA+GGG | - | chr4_2:36505741-36505760 | Msa0598770:intron | 20.0% |
| !!! | TAATTTTTTGGCCAAATTTA+TGG | - | chr4_2:36506223-36506242 | Msa0598770:intron | 20.0% |
| !! | AAAACTAATAGCCATAAATT+TGG | + | chr4_2:36506237-36506256 | None:intergenic | 20.0% |
| !! | TTATAGATATGGATATCATT+TGG | - | chr4_2:36506255-36506274 | Msa0598770:intron | 20.0% |
| !!! | CATTTTTGTGGTAATAATTA+AGG | + | chr4_2:36506431-36506450 | None:intergenic | 20.0% |
| !!! | TCTATAAAATGTCATTTTTG+TGG | + | chr4_2:36506443-36506462 | None:intergenic | 20.0% |
| !!! | TTGTTAATATCAAGTTTTTC+AGG | - | chr4_2:36506468-36506487 | Msa0598770:CDS | 20.0% |
| !!! | GCATTTCTAAAATTCTATAT+AGG | + | chr4_2:36506733-36506752 | None:intergenic | 20.0% |
| ! | AACAAATGTTGAGGTTAAAA+GGG | + | chr4_2:36502426-36502445 | None:intergenic | 25.0% |
| ! | AAACAAATGTTGAGGTTAAA+AGG | + | chr4_2:36502427-36502446 | None:intergenic | 25.0% |
| ! | TGTAATGTTAATGAATTAGC+TGG | + | chr4_2:36502459-36502478 | None:intergenic | 25.0% |
| ! | TTGACCCAAAAAAACTATAT+GGG | + | chr4_2:36502619-36502638 | None:intergenic | 25.0% |
| ! | TTTGACCCAAAAAAACTATA+TGG | + | chr4_2:36502620-36502639 | None:intergenic | 25.0% |
| !!! | CAAAAACAGAGTCTTTTTTA+TGG | - | chr4_2:36502636-36502655 | Msa0598770:CDS | 25.0% |
| !!! | AGTCTTTTTTATGGAGAAAA+TGG | - | chr4_2:36502645-36502664 | Msa0598770:CDS | 25.0% |
| ! | TGCATTCACAAATAATTTGA+AGG | + | chr4_2:36502837-36502856 | None:intergenic | 25.0% |
| ! | TGTTTGTGTTAGTATTTCAT+AGG | - | chr4_2:36503030-36503049 | Msa0598770:intron | 25.0% |
| !!! | TATTTTATCAGCTTTGTGTT+TGG | - | chr4_2:36503103-36503122 | Msa0598770:intron | 25.0% |
| !! | GATTGGTAATTAATATCCTA+AGG | - | chr4_2:36503406-36503425 | Msa0598770:intron | 25.0% |
| !! | AAAGAACATACATAACTTGT+AGG | + | chr4_2:36503448-36503467 | None:intergenic | 25.0% |
| ! | AATTAAGTGGAATGAATATG+AGG | + | chr4_2:36503533-36503552 | None:intergenic | 25.0% |
| ! | GTTGTAATGTCATGTTTATA+TGG | - | chr4_2:36503707-36503726 | Msa0598770:intron | 25.0% |
| ! | TATATAAGAAATTGAGGTAC+TGG | + | chr4_2:36503854-36503873 | None:intergenic | 25.0% |
| ! | TGAGAATTTGTGATTTATAC+TGG | - | chr4_2:36503968-36503987 | Msa0598770:intron | 25.0% |
| !! | TTAAATTATGAAGGTATGGT+AGG | + | chr4_2:36504123-36504142 | None:intergenic | 25.0% |
| ! | AATTTGAAAGATCAACAACT+TGG | - | chr4_2:36504141-36504160 | Msa0598770:intron | 25.0% |
| ! | ATTTGAAAGATCAACAACTT+GGG | - | chr4_2:36504142-36504161 | Msa0598770:intron | 25.0% |
| ! | AGATAAGAGAAATGATTTCT+TGG | - | chr4_2:36504232-36504251 | Msa0598770:intron | 25.0% |
| ! | GAAATGGAAGAATAATATCT+GGG | - | chr4_2:36504662-36504681 | Msa0598770:intron | 25.0% |
| ! | GGTTATAATTAATGGTGATA+AGG | - | chr4_2:36504683-36504702 | Msa0598770:intron | 25.0% |
| ! | GTGAAAATGAGTTTATAAGT+GGG | + | chr4_2:36505158-36505177 | None:intergenic | 25.0% |
| ! | TGTGAAAATGAGTTTATAAG+TGG | + | chr4_2:36505159-36505178 | None:intergenic | 25.0% |
| ! | TATAATCTTTGAATTTGGGT+TGG | - | chr4_2:36505285-36505304 | Msa0598770:intron | 25.0% |
| !! | ATAATCTTTGAATTTGGGTT+GGG | - | chr4_2:36505286-36505305 | Msa0598770:intron | 25.0% |
| ! | CTGAAAATGAGTTTATAAGT+GGG | + | chr4_2:36505345-36505364 | None:intergenic | 25.0% |
| ! | TCTGAAAATGAGTTTATAAG+TGG | + | chr4_2:36505346-36505365 | None:intergenic | 25.0% |
| !! | ATTTATGAATTGGCTTAACT+TGG | + | chr4_2:36505424-36505443 | None:intergenic | 25.0% |
| ! | GTTAAGCCAATTCATAAATT+TGG | - | chr4_2:36505425-36505444 | Msa0598770:intron | 25.0% |
| ! | AGCAGTTATTTATCATAGTT+CGG | + | chr4_2:36505719-36505738 | None:intergenic | 25.0% |
| !! | CAGGGATGAAATATATTTTA+TGG | - | chr4_2:36505759-36505778 | Msa0598770:intron | 25.0% |
| ! | TTCTTAAAGTTACTAAGTCT+TGG | - | chr4_2:36505797-36505816 | Msa0598770:intron | 25.0% |
| ! | ATACAGTTTATGTTCCATAT+TGG | - | chr4_2:36505825-36505844 | Msa0598770:intron | 25.0% |
| ! | CAAAGGATATAAGCATAAAT+TGG | + | chr4_2:36506005-36506024 | None:intergenic | 25.0% |
| ! | CAATTTATGCTTATATCCTT+TGG | - | chr4_2:36506003-36506022 | Msa0598770:intron | 25.0% |
| !!! | TAATTGTTCTGCTTTTACAT+TGG | - | chr4_2:36506155-36506174 | Msa0598770:intron | 25.0% |
| !!! | GGCTATTAGTTTTATAGATA+TGG | - | chr4_2:36506244-36506263 | Msa0598770:intron | 25.0% |
| ! | AGTAGTTGAACAGAAAAAAA+AGG | + | chr4_2:36506292-36506311 | None:intergenic | 25.0% |
| ! | TGTGCATAAATAAATAGTGT+AGG | + | chr4_2:36506378-36506397 | None:intergenic | 25.0% |
| ! | GAAATGCTTAATTTCCTAAT+TGG | - | chr4_2:36506746-36506765 | Msa0598770:five_prime_UTR | 25.0% |
| ACAAATGTTGAGGTTAAAAG+GGG | + | chr4_2:36502425-36502444 | None:intergenic | 30.0% | |
| GTATAGCAAAACAAATGTTG+AGG | + | chr4_2:36502435-36502454 | None:intergenic | 30.0% | |
| ! | CAAAGGGTATAGATATATAG+AGG | + | chr4_2:36502577-36502596 | None:intergenic | 30.0% |
| GTGTAAAATCAAAGTGCAAA+GGG | + | chr4_2:36502593-36502612 | None:intergenic | 30.0% | |
| AGTGTAAAATCAAAGTGCAA+AGG | + | chr4_2:36502594-36502613 | None:intergenic | 30.0% | |
| !!! | ACTGACCCATATAGTTTTTT+TGG | - | chr4_2:36502611-36502630 | Msa0598770:CDS | 30.0% |
| !!! | CTGACCCATATAGTTTTTTT+GGG | - | chr4_2:36502612-36502631 | Msa0598770:CDS | 30.0% |
| TTTATGGAGAAAATGGAGAA+TGG | - | chr4_2:36502652-36502671 | Msa0598770:CDS | 30.0% | |
| TTATGGAGAAAATGGAGAAT+GGG | - | chr4_2:36502653-36502672 | Msa0598770:CDS | 30.0% | |
| TTGTGTACACTTCTGATTAA+AGG | - | chr4_2:36502934-36502953 | Msa0598770:intron | 30.0% | |
| TTTCATAGGCTGATAGTATA+TGG | - | chr4_2:36503044-36503063 | Msa0598770:intron | 30.0% | |
| AACATAATGTAACCGTAGTA+AGG | - | chr4_2:36503340-36503359 | Msa0598770:intron | 30.0% | |
| ! | TGACTTTGAAGAAATATCCT+AGG | + | chr4_2:36503367-36503386 | None:intergenic | 30.0% |
| GAAATTTGCAAAGTGTAGAT+TGG | - | chr4_2:36503389-36503408 | Msa0598770:intron | 30.0% | |
| CATAGTGACTGAAAATTAAG+TGG | + | chr4_2:36503546-36503565 | None:intergenic | 30.0% | |
| AAACATGACATTACAACGTA+TGG | + | chr4_2:36503704-36503723 | None:intergenic | 30.0% | |
| GTAATGTCATGTTTATATGG+CGG | - | chr4_2:36503710-36503729 | Msa0598770:intron | 30.0% | |
| !!! | ATGTTTATATGGCGGATTTT+TGG | - | chr4_2:36503718-36503737 | Msa0598770:intron | 30.0% |
| ! | TGGATTAGAGTTATCAATGA+TGG | + | chr4_2:36503755-36503774 | None:intergenic | 30.0% |
| GTAATAAACTAACACACAAG+TGG | + | chr4_2:36503775-36503794 | None:intergenic | 30.0% | |
| TGATATATACGAGTAGAACT+TGG | - | chr4_2:36503803-36503822 | Msa0598770:intron | 30.0% | |
| TGACTAATTATTGAATGTGG+TGG | - | chr4_2:36504305-36504324 | Msa0598770:CDS | 30.0% | |
| !! | TTGAATGTGGTGGATAATTT+AGG | - | chr4_2:36504315-36504334 | Msa0598770:CDS | 30.0% |
| TCATTCATATATCCAGTGAT+AGG | - | chr4_2:36504427-36504446 | Msa0598770:CDS | 30.0% | |
| GGAAATGGAAGAATAATATC+TGG | - | chr4_2:36504661-36504680 | Msa0598770:intron | 30.0% | |
| GAATAAACGTACTTCTCATA+TGG | + | chr4_2:36504927-36504946 | None:intergenic | 30.0% | |
| ! | GCAAGTTATGCTTTTAATGT+TGG | - | chr4_2:36504981-36505000 | Msa0598770:intron | 30.0% |
| AAGTACATAAAGATGCTCTT+TGG | + | chr4_2:36505060-36505079 | None:intergenic | 30.0% | |
| AAAACTATCTTGTAAGGTCA+GGG | - | chr4_2:36505313-36505332 | Msa0598770:intron | 30.0% | |
| AAAATGAGTTTATAAGTGGG+AGG | + | chr4_2:36505155-36505174 | None:intergenic | 30.0% | |
| GTCTTACATTGGATAATGTA+TGG | + | chr4_2:36505369-36505388 | None:intergenic | 30.0% | |
| CAATGTAAGACTCTTAACAA+CGG | - | chr4_2:36505378-36505397 | Msa0598770:intron | 30.0% | |
| ! | TTTTCATTTTCAAACCGTGT+AGG | - | chr4_2:36505455-36505474 | Msa0598770:intron | 30.0% |
| CTATATCTTTAGATCCTACA+CGG | + | chr4_2:36505472-36505491 | None:intergenic | 30.0% | |
| GCAATTATGTATCATTGATG+TGG | - | chr4_2:36505649-36505668 | Msa0598770:intron | 30.0% | |
| CTGGTTAAACTATTCCAATA+TGG | + | chr4_2:36505842-36505861 | None:intergenic | 30.0% | |
| AAAATGTTCTTGAGCAAGAT+TGG | + | chr4_2:36505903-36505922 | None:intergenic | 30.0% | |
| ! | AAATCCATTCATGTGCTTTT+AGG | + | chr4_2:36505972-36505991 | None:intergenic | 30.0% |
| TAAGCATAAATTGGTGCATT+AGG | + | chr4_2:36505996-36506015 | None:intergenic | 30.0% | |
| AACTAGAGTACATTATGGAA+TGG | + | chr4_2:36506044-36506063 | None:intergenic | 30.0% | |
| TGAGAAACTAGAGTACATTA+TGG | + | chr4_2:36506049-36506068 | None:intergenic | 30.0% | |
| ! | TTTTCTGTTCAACTACTGAA+TGG | - | chr4_2:36506295-36506314 | Msa0598770:intron | 30.0% |
| TTTCTGTTCAACTACTGAAT+GGG | - | chr4_2:36506296-36506315 | Msa0598770:intron | 30.0% | |
| TAAATAGTGTAGGTTATGTC+AGG | + | chr4_2:36506368-36506387 | None:intergenic | 30.0% | |
| ! | CTTATGTAAGACTAGTTGAG+AGG | + | chr4_2:36502335-36502354 | None:intergenic | 35.0% |
| AGGGTATAGATATATAGAGG+AGG | + | chr4_2:36502574-36502593 | None:intergenic | 35.0% | |
| GGTTGTACTAGTCATAGATA+TGG | - | chr4_2:36502772-36502791 | Msa0598770:intron | 35.0% | |
| ! | AGACTTAGGGTTTTTCTTAG+TGG | - | chr4_2:36502808-36502827 | Msa0598770:intron | 35.0% |
| ATTATTTGTGAATGCACTCC+TGG | - | chr4_2:36502841-36502860 | Msa0598770:intron | 35.0% | |
| TGTGTTTGTGTTATGCATGT+CGG | + | chr4_2:36502972-36502991 | None:intergenic | 35.0% | |
| TAGGCTGATAGTATATGGTT+TGG | - | chr4_2:36503049-36503068 | Msa0598770:intron | 35.0% | |
| !! | GATAGTATATGGTTTGGTGA+AGG | - | chr4_2:36503055-36503074 | Msa0598770:intron | 35.0% |
| ATTTGTCTCAATGAACTCCT+TGG | - | chr4_2:36503164-36503183 | Msa0598770:intron | 35.0% | |
| TCATTAGCATGATCAGAAAG+AGG | + | chr4_2:36503196-36503215 | None:intergenic | 35.0% | |
| AATATCCTAGGACCTTACTA+CGG | + | chr4_2:36503355-36503374 | None:intergenic | 35.0% | |
| !! | GAATTTTGATATCACTGCAG+TGG | + | chr4_2:36503604-36503623 | None:intergenic | 35.0% |
| ACAACGTATGGCAGAAAAAT+TGG | + | chr4_2:36503692-36503711 | None:intergenic | 35.0% | |
| TTAGAGTTATCAATGATGGC+TGG | + | chr4_2:36503751-36503770 | None:intergenic | 35.0% | |
| ACAAGTACTCAAGTAGAACT+TGG | - | chr4_2:36503899-36503918 | Msa0598770:intron | 35.0% | |
| ACAGTATCTGTTGATGCAAA+AGG | - | chr4_2:36503923-36503942 | Msa0598770:intron | 35.0% | |
| AAATTCTCATTTCTCAGCAG+AGG | + | chr4_2:36503957-36503976 | None:intergenic | 35.0% | |
| TTTATACTGGCAGTGTACTT+TGG | - | chr4_2:36503981-36504000 | Msa0598770:intron | 35.0% | |
| !! | AATTTTGTTTGCCACATTGC+AGG | - | chr4_2:36504005-36504024 | Msa0598770:intron | 35.0% |
| ATGAAAGTGAAGCTAACAAG+CGG | + | chr4_2:36504349-36504368 | None:intergenic | 35.0% | |
| ACTTATAAAGCTCCTATCAC+TGG | + | chr4_2:36504442-36504461 | None:intergenic | 35.0% | |
| TAATGGTGATAAGGTTCCAT+TGG | - | chr4_2:36504692-36504711 | Msa0598770:intron | 35.0% | |
| AATGGTGATAAGGTTCCATT+GGG | - | chr4_2:36504693-36504712 | Msa0598770:intron | 35.0% | |
| GCTCAAATACTACAATCAAG+TGG | - | chr4_2:36504728-36504747 | Msa0598770:intron | 35.0% | |
| ! | ATTTCGTCTGAGATCTAAAG+AGG | - | chr4_2:36504845-36504864 | Msa0598770:intron | 35.0% |
| AACAAAGTTCATTCGAAGCA+CGG | + | chr4_2:36505033-36505052 | None:intergenic | 35.0% | |
| GGTTCCAAAACTATCTTGTA+AGG | - | chr4_2:36505307-36505326 | Msa0598770:intron | 35.0% | |
| ! | CTGACCTTACAAGATAGTTT+TGG | + | chr4_2:36505314-36505333 | None:intergenic | 35.0% |
| CAAAACTATCTTGTAAGGTC+AGG | - | chr4_2:36505312-36505331 | Msa0598770:intron | 35.0% | |
| CGTTGTTAAGAGTCTTACAT+TGG | + | chr4_2:36505380-36505399 | None:intergenic | 35.0% | |
| TTAACAACGGAAATAGTGCA+CGG | - | chr4_2:36505391-36505410 | Msa0598770:intron | 35.0% | |
| ! | CATATTACTGTTTTACGGCT+AGG | - | chr4_2:36505627-36505646 | Msa0598770:intron | 35.0% |
| ! | TCATTGATGTGGTCTCTTTT+CGG | - | chr4_2:36505660-36505679 | Msa0598770:intron | 35.0% |
| TTCTCTGTGTGTACTTTGTT+AGG | - | chr4_2:36505936-36505955 | Msa0598770:intron | 35.0% | |
| !!! | TCATGTGCTTTTAGGATAGT+TGG | + | chr4_2:36505964-36505983 | None:intergenic | 35.0% |
| ! | CTATCCTAAAAGCACATGAA+TGG | - | chr4_2:36505965-36505984 | Msa0598770:intron | 35.0% |
| GATATATGCTTCAAGTCCAA+AGG | + | chr4_2:36506022-36506041 | None:intergenic | 35.0% | |
| !! | CGAGCTTATTTCTAGAACTT+AGG | - | chr4_2:36506071-36506090 | Msa0598770:intron | 35.0% |
| !! | ATTTCTAGAACTTAGGCTGT+TGG | - | chr4_2:36506078-36506097 | Msa0598770:intron | 35.0% |
| GGAAGATATCTAATTCCTTG+AGG | + | chr4_2:36506347-36506366 | None:intergenic | 35.0% | |
| ! | GATTCAAGCTTTTACATTGC+TGG | + | chr4_2:36506648-36506667 | None:intergenic | 35.0% |
| CAGCTTATGGAACAAGTATT+GGG | + | chr4_2:36506700-36506719 | None:intergenic | 35.0% | |
| AGGCATAAATAACCAGCTTA+TGG | + | chr4_2:36506713-36506732 | None:intergenic | 35.0% | |
| AAAGAGAGAGAGAGAGAAAG+TGG | + | chr4_2:36502507-36502526 | None:intergenic | 40.0% | |
| AAGAGCTGAGAGAAATGAGT+GGG | - | chr4_2:36502713-36502732 | Msa0598770:intron | 40.0% | |
| GAATATGTTGAAGTCACGTG+TGG | - | chr4_2:36502751-36502770 | Msa0598770:intron | 40.0% | |
| ! | CATAGATATGGTGATGCTGT+TGG | - | chr4_2:36502784-36502803 | Msa0598770:intron | 40.0% |
| ! | TGATGCTGTTGGTAGACTTA+GGG | - | chr4_2:36502795-36502814 | Msa0598770:intron | 40.0% |
| AGAAAGTGATGAGAGAGAGA+GGG | + | chr4_2:36502880-36502899 | None:intergenic | 40.0% | |
| AAGAAAGTGATGAGAGAGAG+AGG | + | chr4_2:36502881-36502900 | None:intergenic | 40.0% | |
| TCAGAAAGAGGATCAAACCA+AGG | + | chr4_2:36503184-36503203 | None:intergenic | 40.0% | |
| ATATCACTGCAGTGGATACA+TGG | + | chr4_2:36503596-36503615 | None:intergenic | 40.0% | |
| GTGATATCAAAATTCCGCCA+TGG | - | chr4_2:36503609-36503628 | Msa0598770:intron | 40.0% | |
| ATAGATGTTGCAGCCTATGA+CGG | + | chr4_2:36503661-36503680 | None:intergenic | 40.0% | |
| GGGAAGAGATCATACGATTA+AGG | - | chr4_2:36504162-36504181 | Msa0598770:intron | 40.0% | |
| AAATGATTTCTTGGTCCCTC+TGG | - | chr4_2:36504241-36504260 | Msa0598770:intron | 40.0% | |
| AATGATTTCTTGGTCCCTCT+GGG | - | chr4_2:36504242-36504261 | Msa0598770:intron | 40.0% | |
| ! | ATGAGTTTGTTCGCTGTACT+AGG | - | chr4_2:36504805-36504824 | Msa0598770:intron | 40.0% |
| ATGCTGTGTCAGATGCAAAT+TGG | - | chr4_2:36504886-36504905 | Msa0598770:intron | 40.0% | |
| !!! | CTGGTTTTGTATGGTGAGTT+AGG | + | chr4_2:36505118-36505137 | None:intergenic | 40.0% |
| !!! | CCTTACAAGCTGGTTTTGTA+TGG | + | chr4_2:36505127-36505146 | None:intergenic | 40.0% |
| CCATACAAAACCAGCTTGTA+AGG | - | chr4_2:36505124-36505143 | Msa0598770:intron | 40.0% | |
| !!! | CACTCTAGATGTCTGGTTTT+GGG | + | chr4_2:36505212-36505231 | None:intergenic | 40.0% |
| !! | ACACTCTAGATGTCTGGTTT+TGG | + | chr4_2:36505213-36505232 | None:intergenic | 40.0% |
| TAAGTCACACTCTAGATGTC+TGG | + | chr4_2:36505219-36505238 | None:intergenic | 40.0% | |
| ! | CATCTAGAGTGTGACTTAGA+TGG | - | chr4_2:36505221-36505240 | Msa0598770:intron | 40.0% |
| ! | TAGCCTATCCATGCTTTGTT+GGG | + | chr4_2:36505262-36505281 | None:intergenic | 40.0% |
| ATAGCCTATCCATGCTTTGT+TGG | + | chr4_2:36505263-36505282 | None:intergenic | 40.0% | |
| CTCTGCAAATTAGTAAGGAC+TGG | + | chr4_2:36505498-36505517 | None:intergenic | 40.0% | |
| GAGCACTCTGCAAATTAGTA+AGG | + | chr4_2:36505503-36505522 | None:intergenic | 40.0% | |
| TGGAATAGTTTAACCAGACC+TGG | - | chr4_2:36505845-36505864 | Msa0598770:intron | 40.0% | |
| ACACACAGAGAATCACTAGA+GGG | + | chr4_2:36505928-36505947 | None:intergenic | 40.0% | |
| TACACACAGAGAATCACTAG+AGG | + | chr4_2:36505929-36505948 | None:intergenic | 40.0% | |
| TGTTCAACTACTGAATGGGA+AGG | - | chr4_2:36506300-36506319 | Msa0598770:intron | 40.0% | |
| AGTTTGGGAACATTTCCTCA+AGG | - | chr4_2:36506329-36506348 | Msa0598770:CDS | 40.0% | |
| GGCAGTTGCAATCTGAAAAA+CGG | + | chr4_2:36506607-36506626 | None:intergenic | 40.0% | |
| TGGTAAAGTCAGTACAAGTC+TGG | + | chr4_2:36506628-36506647 | None:intergenic | 40.0% | |
| CCAGCTTATGGAACAAGTAT+TGG | + | chr4_2:36506701-36506720 | None:intergenic | 40.0% | |
| CCAATACTTGTTCCATAAGC+TGG | - | chr4_2:36506698-36506717 | Msa0598770:five_prime_UTR | 40.0% | |
| CAGACTGTTGATGTCCAATT+AGG | + | chr4_2:36506763-36506782 | None:intergenic | 40.0% | |
| CTTTCACTGTTCTCATTGAC+TGG | - | chr4_2:36506790-36506809 | Msa0598770:five_prime_UTR | 40.0% | |
| !! | AGAGAAAGTGGTTGGTGATG+AGG | + | chr4_2:36502495-36502514 | None:intergenic | 45.0% |
| AGAGAGAGAGAGAAAGTGGT+TGG | + | chr4_2:36502503-36502522 | None:intergenic | 45.0% | |
| GGAGAAAATGGAGAATGGGT+TGG | - | chr4_2:36502657-36502676 | Msa0598770:CDS | 45.0% | |
| !! | AATGGAGAATGGGTTGGAGA+AGG | - | chr4_2:36502663-36502682 | Msa0598770:CDS | 45.0% |
| !! | ATGGAGAATGGGTTGGAGAA+GGG | - | chr4_2:36502664-36502683 | Msa0598770:CDS | 45.0% |
| !! | AATGGGTTGGAGAAGGGAAA+TGG | - | chr4_2:36502670-36502689 | Msa0598770:CDS | 45.0% |
| !! | ATGGGTTGGAGAAGGGAAAT+GGG | - | chr4_2:36502671-36502690 | Msa0598770:CDS | 45.0% |
| TGGGTTGTCAATGTTTAGCG+AGG | - | chr4_2:36502690-36502709 | Msa0598770:intron | 45.0% | |
| GAAGAGCTGAGAGAAATGAG+TGG | - | chr4_2:36502712-36502731 | Msa0598770:intron | 45.0% | |
| AGAGCTGAGAGAAATGAGTG+GGG | - | chr4_2:36502714-36502733 | Msa0598770:intron | 45.0% | |
| ! | GTGATGCTGTTGGTAGACTT+AGG | - | chr4_2:36502794-36502813 | Msa0598770:intron | 45.0% |
| TGTAACCGTAGTAAGGTCCT+AGG | - | chr4_2:36503347-36503366 | Msa0598770:intron | 45.0% | |
| !! | CATTTCTCAGCAGAGGTACT+TGG | + | chr4_2:36503950-36503969 | None:intergenic | 45.0% |
| TTGTTTGCCACATTGCAGGA+TGG | - | chr4_2:36504009-36504028 | Msa0598770:intron | 45.0% | |
| GAGTGTTTCTCAAATGCAGC+AGG | + | chr4_2:36504624-36504643 | None:intergenic | 45.0% | |
| GCTGCATTTGAGAAACACTC+TGG | - | chr4_2:36504624-36504643 | Msa0598770:intron | 45.0% | |
| GAAGAGAGACAGCAAGGAAA+TGG | - | chr4_2:36504646-36504665 | Msa0598770:intron | 45.0% | |
| ! | AGCAGCACTGTTTTACCCAA+TGG | + | chr4_2:36504711-36504730 | None:intergenic | 45.0% |
| TACAGCGAACAAACTCATCG+CGG | + | chr4_2:36504803-36504822 | None:intergenic | 45.0% | |
| ACACAGCATCATGGTGAATG+CGG | + | chr4_2:36504875-36504894 | None:intergenic | 45.0% | |
| TTGCATCTGACACAGCATCA+TGG | + | chr4_2:36504884-36504903 | None:intergenic | 45.0% | |
| GGGGTGTGTTAAGAGTGATA+TGG | + | chr4_2:36505182-36505201 | None:intergenic | 45.0% | |
| GACTTAGATGGTTTGATCGC+AGG | - | chr4_2:36505233-36505252 | Msa0598770:intron | 45.0% | |
| TTAGATGGTTTGATCGCAGG+TGG | - | chr4_2:36505236-36505255 | Msa0598770:intron | 45.0% | |
| ! | CAGACCTGGTACTGAATTCT+GGG | - | chr4_2:36505859-36505878 | Msa0598770:intron | 45.0% |
| CAAACCCAGAATTCAGTACC+AGG | + | chr4_2:36505866-36505885 | None:intergenic | 45.0% | |
| AATGGGAAGGACTCAGAGTT+TGG | - | chr4_2:36506313-36506332 | Msa0598770:intron | 45.0% | |
| ATGGGAAGGACTCAGAGTTT+GGG | - | chr4_2:36506314-36506333 | Msa0598770:intron | 45.0% | |
| ! | TGTGATGATGAAGAAGAGCG+AGG | - | chr4_2:36506497-36506516 | Msa0598770:CDS | 45.0% |
| GGAAGTCGAAGAGTTTACAG+AGG | - | chr4_2:36506518-36506537 | Msa0598770:CDS | 45.0% | |
| CGAAGAGTTTACAGAGGATG+CGG | - | chr4_2:36506524-36506543 | Msa0598770:exon | 45.0% | |
| !! | AACCTTTGCACGTTGGTGAT+CGG | + | chr4_2:36506550-36506569 | None:intergenic | 45.0% |
| TGCACTTCATGTGTGTGCTT+TGG | - | chr4_2:36506569-36506588 | Msa0598770:five_prime_UTR | 45.0% | |
| GCACTTCATGTGTGTGCTTT+GGG | - | chr4_2:36506570-36506589 | Msa0598770:five_prime_UTR | 45.0% | |
| ACACAATGCTGCTGTTGTTG+AGG | + | chr4_2:36506676-36506695 | None:intergenic | 45.0% | |
| !!! | CTATTTTTTTATTAATTTTT+TGG | - | chr4_2:36506211-36506230 | Msa0598770:intron | 5.0% |
| TGCACTCCTGGTTGTGATGA+AGG | - | chr4_2:36502853-36502872 | Msa0598770:intron | 50.0% | |
| ATTCCGCCATGGCAGCATTA+TGG | - | chr4_2:36503620-36503639 | Msa0598770:intron | 50.0% | |
| AATCCGCCATAATGCTGCCA+TGG | + | chr4_2:36503629-36503648 | None:intergenic | 50.0% | |
| !!! | GGCAGCATTATGGCGGATTT+TGG | - | chr4_2:36503630-36503649 | Msa0598770:intron | 50.0% |
| !! | GATTTTGGCCTAGCCGTCAT+AGG | - | chr4_2:36503645-36503664 | Msa0598770:intron | 50.0% |
| !!! | TATGGCGGATTTTTGGCCTG+CGG | - | chr4_2:36503725-36503744 | Msa0598770:intron | 50.0% |
| CTTGACACCATCCTGCAATG+TGG | + | chr4_2:36504019-36504038 | None:intergenic | 50.0% | |
| ! | CACATTGCAGGATGGTGTCA+AGG | - | chr4_2:36504017-36504036 | Msa0598770:intron | 50.0% |
| ! | ACTCTGGAAGAGAGACAGCA+AGG | - | chr4_2:36504640-36504659 | Msa0598770:intron | 50.0% |
| CAAGTGGCGAAAGCTGCTAA+TGG | - | chr4_2:36504744-36504763 | Msa0598770:intron | 50.0% | |
| GGCTCTCAGAGATCCCAAAA+TGG | - | chr4_2:36504765-36504784 | Msa0598770:intron | 50.0% | |
| CTCAGAGATCCCAAAATGGC+CGG | - | chr4_2:36504769-36504788 | Msa0598770:intron | 50.0% | |
| TCAGAGATCCCAAAATGGCC+GGG | - | chr4_2:36504770-36504789 | Msa0598770:intron | 50.0% | |
| !!! | TCTGGTTTTGGGTGTGAGAG+GGG | + | chr4_2:36505201-36505220 | None:intergenic | 50.0% |
| !!! | GTCTGGTTTTGGGTGTGAGA+GGG | + | chr4_2:36505202-36505221 | None:intergenic | 50.0% |
| !!! | TGTCTGGTTTTGGGTGTGAG+AGG | + | chr4_2:36505203-36505222 | None:intergenic | 50.0% |
| TGGCCCAACAAAGCATGGAT+AGG | - | chr4_2:36505256-36505275 | Msa0598770:intron | 50.0% | |
| CCAGAATTCAGTACCAGGTC+TGG | + | chr4_2:36505861-36505880 | None:intergenic | 50.0% | |
| ! | CCAGACCTGGTACTGAATTC+TGG | - | chr4_2:36505858-36505877 | Msa0598770:intron | 50.0% |
| GAAGTGCAACCTTTGCACGT+TGG | + | chr4_2:36506557-36506576 | None:intergenic | 50.0% | |
| GAGGGACCTTCATCACAACC+AGG | + | chr4_2:36502862-36502881 | None:intergenic | 55.0% | |
| CGACACTGACACACGTACTC+AGG | - | chr4_2:36502992-36503011 | Msa0598770:intron | 55.0% | |
| TGTTGCAGCCTATGACGGCT+AGG | + | chr4_2:36503656-36503675 | None:intergenic | 55.0% | |
| ! | TATCAATGATGGCTGGCCGC+AGG | + | chr4_2:36503744-36503763 | None:intergenic | 55.0% |
| !! | TCCCTCTGGGAGTGTCTTGA+GGG | - | chr4_2:36504255-36504274 | Msa0598770:intron | 55.0% |
| AGATCCCAAAATGGCCGGGT+TGG | - | chr4_2:36504774-36504793 | Msa0598770:intron | 55.0% | |
| !! | GTGACCAACCCGGCCATTTT+GGG | + | chr4_2:36504781-36504800 | None:intergenic | 55.0% |
| ! | GGAGCACTCACCTTACAAGC+TGG | + | chr4_2:36505137-36505156 | None:intergenic | 55.0% |
| CCGCCATAATGCTGCCATGG+CGG | + | chr4_2:36503626-36503645 | None:intergenic | 60.0% | |
| CCGCCATGGCAGCATTATGG+CGG | - | chr4_2:36503623-36503642 | Msa0598770:intron | 60.0% | |
| !! | GTCCCTCTGGGAGTGTCTTG+AGG | - | chr4_2:36504254-36504273 | Msa0598770:intron | 60.0% |
| CCCCTCAAGACACTCCCAGA+GGG | + | chr4_2:36504259-36504278 | None:intergenic | 60.0% | |
| !! | CCCTCTGGGAGTGTCTTGAG+GGG | - | chr4_2:36504256-36504275 | Msa0598770:intron | 60.0% |
| TCCCCTCAAGACACTCCCAG+AGG | + | chr4_2:36504260-36504279 | None:intergenic | 60.0% | |
| ! | GGTGACCAACCCGGCCATTT+TGG | + | chr4_2:36504782-36504801 | None:intergenic | 60.0% |
| ACTCATCGCGGTGACCAACC+CGG | + | chr4_2:36504791-36504810 | None:intergenic | 60.0% | |
| GCAGGTGGCCCAACAAAGCA+TGG | - | chr4_2:36505251-36505270 | Msa0598770:intron | 60.0% | |
| GGCCGATCACCAACGTGCAA+AGG | - | chr4_2:36506545-36506564 | Msa0598770:five_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 36502306 | 36506886 | 36502306 | ID=Msa0598770;Name=Msa0598770 |
| chr4_2 | mRNA | 36502306 | 36506886 | 36502306 | ID=Msa0598770-mRNA-1;Parent=Msa0598770;Name=Msa0598770-mRNA-1;_AED=0.03;_eAED=0.03;_QI=349|1|1|1|0.5|0.66|3|222|239 |
| chr4_2 | exon | 36502306 | 36502702 | 36502306 | ID=Msa0598770-mRNA-1:exon:8282;Parent=Msa0598770-mRNA-1 |
| chr4_2 | exon | 36504258 | 36504582 | 36504258 | ID=Msa0598770-mRNA-1:exon:8281;Parent=Msa0598770-mRNA-1 |
| chr4_2 | exon | 36506318 | 36506886 | 36506318 | ID=Msa0598770-mRNA-1:exon:8280;Parent=Msa0598770-mRNA-1 |
| chr4_2 | five_prime_UTR | 36506538 | 36506886 | 36506538 | ID=Msa0598770-mRNA-1:five_prime_utr;Parent=Msa0598770-mRNA-1 |
| chr4_2 | CDS | 36506318 | 36506537 | 36506318 | ID=Msa0598770-mRNA-1:cds;Parent=Msa0598770-mRNA-1 |
| chr4_2 | CDS | 36504258 | 36504582 | 36504258 | ID=Msa0598770-mRNA-1:cds;Parent=Msa0598770-mRNA-1 |
| chr4_2 | CDS | 36502528 | 36502702 | 36502528 | ID=Msa0598770-mRNA-1:cds;Parent=Msa0598770-mRNA-1 |
| chr4_2 | three_prime_UTR | 36502306 | 36502527 | 36502306 | ID=Msa0598770-mRNA-1:three_prime_utr;Parent=Msa0598770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
