Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601450 | XP_024636301.1 | 64.809 | 628 | 128 | 9 | 1 | 552 | 1 | 611 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601450 | sp|Q9XEC3|WRK42_ARATH | 34.537 | 443 | 221 | 10 | 104 | 501 | 85 | 503 | 3.21e-51 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601450 | A0A396I431 | 64.809 | 628 | 128 | 9 | 1 | 552 | 1 | 611 | 0.0 | 681 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0601450 | TF | WRKY |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601450 | MtrunA17_Chr4g0025061 | 64.809 | 628 | 128 | 9 | 1 | 552 | 1 | 611 | 0.0 | 681 |
| Msa0601450 | MtrunA17_Chr4g0025051 | 64.248 | 565 | 123 | 4 | 33 | 523 | 8 | 567 | 0.0 | 612 |
| Msa0601450 | MtrunA17_Chr4g0024391 | 60.606 | 495 | 114 | 6 | 132 | 552 | 1 | 488 | 1.27e-177 | 509 |
| Msa0601450 | MtrunA17_Chr2g0322391 | 38.623 | 523 | 181 | 18 | 84 | 518 | 120 | 590 | 4.56e-75 | 249 |
| Msa0601450 | MtrunA17_Chr2g0288871 | 33.013 | 521 | 222 | 21 | 60 | 506 | 67 | 534 | 2.50e-56 | 198 |
| Msa0601450 | MtrunA17_Chr4g0075201 | 31.847 | 471 | 233 | 12 | 60 | 489 | 41 | 464 | 4.32e-48 | 174 |
| Msa0601450 | MtrunA17_Chr4g0024401 | 69.167 | 120 | 31 | 2 | 16 | 135 | 8 | 121 | 2.60e-46 | 158 |
| Msa0601450 | MtrunA17_Chr3g0099641 | 27.628 | 409 | 209 | 11 | 127 | 501 | 89 | 444 | 1.16e-35 | 139 |
| Msa0601450 | MtrunA17_Chr7g0270831 | 32.692 | 260 | 101 | 9 | 301 | 524 | 198 | 419 | 5.96e-28 | 116 |
| Msa0601450 | MtrunA17_Chr5g0419241 | 69.811 | 53 | 16 | 0 | 297 | 349 | 55 | 107 | 3.25e-22 | 91.7 |
| Msa0601450 | MtrunA17_Chr2g0302391 | 36.464 | 181 | 79 | 5 | 304 | 448 | 196 | 376 | 2.99e-21 | 96.7 |
| Msa0601450 | MtrunA17_Chr7g0216891 | 31.602 | 231 | 123 | 9 | 138 | 355 | 47 | 255 | 4.93e-21 | 97.1 |
| Msa0601450 | MtrunA17_Chr4g0051181 | 67.273 | 55 | 18 | 0 | 301 | 355 | 225 | 279 | 2.29e-20 | 94.4 |
| Msa0601450 | MtrunA17_Chr4g0060271 | 61.404 | 57 | 22 | 0 | 299 | 355 | 235 | 291 | 3.85e-19 | 91.3 |
| Msa0601450 | MtrunA17_Chr3g0101131 | 44.776 | 67 | 36 | 1 | 289 | 355 | 385 | 450 | 1.13e-12 | 70.5 |
| Msa0601450 | MtrunA17_Chr4g0001361 | 24.091 | 220 | 112 | 6 | 296 | 503 | 139 | 315 | 2.13e-12 | 68.2 |
| Msa0601450 | MtrunA17_Chr7g0218081 | 41.250 | 80 | 36 | 2 | 276 | 355 | 377 | 445 | 6.00e-12 | 68.2 |
| Msa0601450 | MtrunA17_Chr5g0445311 | 50.000 | 58 | 28 | 1 | 298 | 355 | 343 | 399 | 1.82e-11 | 66.6 |
| Msa0601450 | MtrunA17_Chr5g0418191 | 41.667 | 84 | 40 | 3 | 276 | 355 | 277 | 355 | 1.98e-11 | 66.2 |
| Msa0601450 | MtrunA17_Chr2g0333851 | 33.333 | 129 | 64 | 7 | 298 | 414 | 144 | 262 | 7.84e-11 | 63.5 |
| Msa0601450 | MtrunA17_Chr4g0004911 | 54.000 | 50 | 22 | 1 | 306 | 355 | 323 | 371 | 8.05e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601450 | AT4G04450.1 | 34.537 | 443 | 221 | 10 | 104 | 501 | 85 | 503 | 3.26e-52 | 186 |
| Msa0601450 | AT4G04450.2 | 33.949 | 433 | 217 | 10 | 114 | 501 | 1 | 409 | 3.70e-48 | 173 |
| Msa0601450 | AT4G22070.4 | 31.740 | 523 | 263 | 15 | 47 | 501 | 18 | 514 | 1.00e-44 | 166 |
| Msa0601450 | AT4G22070.3 | 31.740 | 523 | 263 | 15 | 47 | 501 | 18 | 514 | 1.00e-44 | 166 |
| Msa0601450 | AT4G22070.2 | 31.740 | 523 | 263 | 15 | 47 | 501 | 18 | 514 | 1.00e-44 | 166 |
| Msa0601450 | AT4G22070.1 | 31.740 | 523 | 263 | 15 | 47 | 501 | 18 | 514 | 1.00e-44 | 166 |
| Msa0601450 | AT1G62300.1 | 31.347 | 453 | 223 | 13 | 102 | 504 | 127 | 541 | 2.37e-44 | 165 |
| Msa0601450 | AT4G01720.1 | 32.099 | 243 | 100 | 8 | 122 | 355 | 89 | 275 | 7.55e-26 | 111 |
| Msa0601450 | AT1G68150.1 | 30.357 | 224 | 104 | 6 | 135 | 355 | 97 | 271 | 1.17e-19 | 91.3 |
| Msa0601450 | AT1G18860.1 | 29.924 | 264 | 158 | 8 | 107 | 355 | 24 | 275 | 2.22e-19 | 92.0 |
| Msa0601450 | AT5G15130.2 | 63.462 | 52 | 19 | 0 | 304 | 355 | 170 | 221 | 1.80e-18 | 89.0 |
| Msa0601450 | AT5G15130.1 | 63.462 | 52 | 19 | 0 | 304 | 355 | 212 | 263 | 2.16e-18 | 89.0 |
| Msa0601450 | AT1G69810.1 | 26.608 | 342 | 172 | 13 | 131 | 426 | 25 | 333 | 6.85e-17 | 83.2 |
| Msa0601450 | AT1G69810.2 | 54.688 | 64 | 29 | 0 | 292 | 355 | 118 | 181 | 3.19e-16 | 80.5 |
| Msa0601450 | AT4G26640.5 | 55.000 | 60 | 22 | 2 | 300 | 355 | 182 | 240 | 5.42e-13 | 71.2 |
| Msa0601450 | AT4G26640.6 | 55.000 | 60 | 22 | 2 | 300 | 355 | 182 | 240 | 5.42e-13 | 71.2 |
| Msa0601450 | AT4G26640.4 | 55.000 | 60 | 22 | 2 | 300 | 355 | 182 | 240 | 5.42e-13 | 71.2 |
| Msa0601450 | AT4G26640.3 | 55.000 | 60 | 22 | 2 | 300 | 355 | 182 | 240 | 5.42e-13 | 71.2 |
| Msa0601450 | AT4G26640.7 | 55.000 | 60 | 22 | 2 | 300 | 355 | 318 | 376 | 7.24e-13 | 71.6 |
| Msa0601450 | AT4G26640.1 | 55.000 | 60 | 22 | 2 | 300 | 355 | 286 | 344 | 8.05e-13 | 71.2 |
| Msa0601450 | AT4G26640.2 | 55.000 | 60 | 22 | 2 | 300 | 355 | 358 | 416 | 8.33e-13 | 71.2 |
Find 98 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGAATACACCATCTTTAT+TGG | 0.072003 | 4_2:-44137820 | Msa0601450:CDS |
| GAAGTTTCTGATGGAAAATT+TGG | 0.152030 | 4_2:-44136078 | Msa0601450:CDS |
| GACAAAGATGCAAGAAAATT+TGG | 0.170415 | 4_2:+44134106 | None:intergenic |
| AGTAGAGTTTGATTTCTTTA+AGG | 0.190874 | 4_2:-44137904 | Msa0601450:CDS |
| GCAAAACTCTGAGAGATTAA+AGG | 0.211734 | 4_2:+44134280 | None:intergenic |
| CCTAACTGGTCCTGACTTCT+AGG | 0.238769 | 4_2:+44135814 | None:intergenic |
| TGCTGGATTGACTACTATTA+AGG | 0.246157 | 4_2:-44136001 | Msa0601450:CDS |
| ATTAAGGTTAAGGAAGTTAA+AGG | 0.251785 | 4_2:-44135985 | Msa0601450:CDS |
| CCTGCTCTTACTTCCATTAT+TGG | 0.259720 | 4_2:-44134082 | Msa0601450:CDS |
| TCAAGGTTGTTTGTGTCTTC+AGG | 0.260536 | 4_2:+44138044 | None:intergenic |
| TTAACTGCCCGAGCAATATT+TGG | 0.271031 | 4_2:+44134148 | None:intergenic |
| CTGCAAAGATAATAAGATTT+AGG | 0.271571 | 4_2:+44135500 | None:intergenic |
| GGGTTCCTTTGTGGAGTATC+TGG | 0.273553 | 4_2:+44134319 | None:intergenic |
| GTCTTGTTGTCTTCTGAATT+AGG | 0.286460 | 4_2:+44137552 | None:intergenic |
| CGAGCTTGAACGAAAGAAAA+TGG | 0.321409 | 4_2:-44136328 | Msa0601450:CDS |
| AATAAGGTTAAGGAAGTTAA+AGG | 0.322766 | 4_2:-44136105 | Msa0601450:intron |
| AAAGGAGTTTGAAACTGATC+TGG | 0.348918 | 4_2:+44134298 | None:intergenic |
| GGAAACGAGTTGTCATTAAC+TGG | 0.351498 | 4_2:+44138065 | None:intergenic |
| AACTGATCTGGGTTCCTTTG+TGG | 0.354361 | 4_2:+44134310 | None:intergenic |
| AAAAGGAAATTTGTTGATGC+TGG | 0.355901 | 4_2:-44136018 | Msa0601450:CDS |
| GAGATGGGATTAGAGAGATT+TGG | 0.369938 | 4_2:+44137937 | None:intergenic |
| TCAACAGCTTGGTCCCATTC+CGG | 0.379544 | 4_2:-44137625 | Msa0601450:intron |
| TCTTCTACTGATAATAATAA+TGG | 0.379622 | 4_2:-44134034 | Msa0601450:CDS |
| ATTGACTACTATTAAGGTTA+AGG | 0.403986 | 4_2:-44135995 | Msa0601450:CDS |
| TTTCAGATGGCTATTCTTCA+AGG | 0.408471 | 4_2:-44136351 | Msa0601450:intron |
| GGATGTCAATGGAGAAAGTA+TGG | 0.409848 | 4_2:-44135551 | Msa0601450:CDS |
| AGCTAGATCAGAAGAAACTA+TGG | 0.417776 | 4_2:-44135677 | Msa0601450:intron |
| GATCTACTATTGACTAAGAA+AGG | 0.422463 | 4_2:+44137972 | None:intergenic |
| ATATGAATATGATCATTGTC+AGG | 0.426352 | 4_2:+44137840 | None:intergenic |
| CTTTGGCTGCAGTAGGTAAA+GGG | 0.427084 | 4_2:+44134496 | None:intergenic |
| CTACTAGTATTGGTAGTAAC+CGG | 0.438929 | 4_2:+44137606 | None:intergenic |
| ACCTACTGCAGCCAAAGAAA+TGG | 0.440244 | 4_2:-44134490 | Msa0601450:CDS |
| TCTTTGGCTGCAGTAGGTAA+AGG | 0.441950 | 4_2:+44134495 | None:intergenic |
| TCTACTCTTGTTTCATGAGA+TGG | 0.448974 | 4_2:+44137921 | None:intergenic |
| TAACATCTACATTCTTACTA+AGG | 0.451173 | 4_2:+44135749 | None:intergenic |
| CTACTCTTGTTTCATGAGAT+GGG | 0.455113 | 4_2:+44137922 | None:intergenic |
| TGCCTGAGTATGACCAATAA+TGG | 0.460348 | 4_2:+44134069 | None:intergenic |
| CCTAGAAGTCAGGACCAGTT+AGG | 0.461756 | 4_2:-44135814 | Msa0601450:CDS |
| AGCTTTAGTTCCAATAAAGA+TGG | 0.465782 | 4_2:+44137810 | None:intergenic |
| GCTATCATTGTGATTTCCTT+CGG | 0.473387 | 4_2:+44134000 | None:intergenic |
| ACAAGATCTTTGCATTGCCT+TGG | 0.476445 | 4_2:+44135898 | None:intergenic |
| TGGTTGCTCAGTCCGAAAAC+AGG | 0.478137 | 4_2:-44135468 | Msa0601450:intron |
| AATGAGAAAACCTAGAAGTC+AGG | 0.488123 | 4_2:-44135824 | Msa0601450:CDS |
| GTATAATCAAGTGTAATAGT+TGG | 0.498502 | 4_2:+44134349 | None:intergenic |
| ATGGTGGAGAATCAATGAAA+AGG | 0.509688 | 4_2:-44136035 | Msa0601450:CDS |
| AAGCATCGAGGTTGCTTCGA+AGG | 0.510775 | 4_2:-44135779 | Msa0601450:CDS |
| TGGGACTAAATTTCAACTCA+AGG | 0.516877 | 4_2:+44138027 | None:intergenic |
| GAAACTCTTGCTTTCACCAA+TGG | 0.517112 | 4_2:+44135706 | None:intergenic |
| TAGCAGTACCAAATATTGCT+CGG | 0.517614 | 4_2:-44134156 | Msa0601450:CDS |
| TTCCATTATTGGTCATACTC+AGG | 0.517830 | 4_2:-44134071 | Msa0601450:CDS |
| AAGGAGTTTGAAACTGATCT+GGG | 0.518182 | 4_2:+44134299 | None:intergenic |
| GTAATAGTTGGAAACGAAGC+AGG | 0.518849 | 4_2:+44134361 | None:intergenic |
| TAGTAGTGATCAATCTATGA+TGG | 0.520634 | 4_2:-44137589 | Msa0601450:CDS |
| TAATAACATTACCTCCCTCT+TGG | 0.525706 | 4_2:+44137530 | None:intergenic |
| TATCTTTGCAGCATGGCCCA+TGG | 0.528432 | 4_2:-44135488 | Msa0601450:CDS |
| ATCTTATTATCTTTGCAGCA+TGG | 0.533638 | 4_2:-44135495 | Msa0601450:CDS |
| ACAAGGAAGGAGTGTTCTTG+TGG | 0.534307 | 4_2:+44134411 | None:intergenic |
| ATCTACTATTGACTAAGAAA+GGG | 0.541952 | 4_2:+44137973 | None:intergenic |
| AAAATTTGGATTAGCAGCAA+TGG | 0.542627 | 4_2:+44134120 | None:intergenic |
| GTATTGGTAGTAACCGGAAT+GGG | 0.543800 | 4_2:+44137612 | None:intergenic |
| AGCAGTACCAAATATTGCTC+GGG | 0.548717 | 4_2:-44134155 | Msa0601450:CDS |
| GGTACTGCTAATAATTGTGA+AGG | 0.548903 | 4_2:+44134169 | None:intergenic |
| AGATTGATCACTACTAGTAT+TGG | 0.549551 | 4_2:+44137596 | None:intergenic |
| GATAATAAGATTTAGGACAC+GGG | 0.551219 | 4_2:+44135507 | None:intergenic |
| ATTTAGTCCCAACGAAAACA+TGG | 0.557013 | 4_2:-44138015 | Msa0601450:CDS |
| AAAGGACAAGAAGTTTCTGA+TGG | 0.557815 | 4_2:-44136087 | Msa0601450:CDS |
| CAGAAGACAACAAGACCAAG+AGG | 0.560043 | 4_2:-44137545 | Msa0601450:CDS |
| AATAACAATGGTAATATCAC+AGG | 0.561708 | 4_2:-44133956 | Msa0601450:CDS |
| CAAGGAAGGAGTGTTCTTGT+GGG | 0.564200 | 4_2:+44134412 | None:intergenic |
| TTATTGTGTTAGATCACTGA+TGG | 0.564668 | 4_2:-44135572 | Msa0601450:intron |
| CCAATAATGGAAGTAAGAGC+AGG | 0.573308 | 4_2:+44134082 | None:intergenic |
| TAGCAACACTAATGATCAGA+AGG | 0.581418 | 4_2:-44133933 | Msa0601450:CDS |
| GCCATTTCTTTGGCTGCAGT+AGG | 0.583103 | 4_2:+44134489 | None:intergenic |
| AGCAACAATAATGTCACAGA+AGG | 0.584455 | 4_2:-44133980 | Msa0601450:CDS |
| TATGAATATGATCATTGTCA+GGG | 0.591183 | 4_2:+44137841 | None:intergenic |
| AGATAATAAGATTTAGGACA+CGG | 0.591778 | 4_2:+44135506 | None:intergenic |
| GTACTGCTAATAATTGTGAA+GGG | 0.593217 | 4_2:+44134170 | None:intergenic |
| ATGATCATTGTCAGGGACAG+AGG | 0.594495 | 4_2:+44137848 | None:intergenic |
| ATGGTGGAGAGTTGGTGCCA+AGG | 0.595504 | 4_2:-44135915 | Msa0601450:CDS |
| AGTATTGGTAGTAACCGGAA+TGG | 0.599485 | 4_2:+44137611 | None:intergenic |
| TACTAATGCTGAGACTGCGA+TGG | 0.603405 | 4_2:-44135869 | Msa0601450:CDS |
| ACTTGAGAATGGTGGAGAGT+TGG | 0.607530 | 4_2:-44135923 | Msa0601450:CDS |
| ATTAACTGGAGTTGAAGCCA+TGG | 0.617430 | 4_2:+44138079 | None:intergenic |
| AGATCACTGATGGATGTCAA+TGG | 0.621939 | 4_2:-44135562 | Msa0601450:CDS |
| TTGAGGGATCAAAGAAGCTG+AGG | 0.622461 | 4_2:+44134252 | None:intergenic |
| AAGTCAGGACCAGTTAGGAT+CGG | 0.622675 | 4_2:-44135809 | Msa0601450:CDS |
| AATGGCAACAATGTCACCGA+AGG | 0.626879 | 4_2:-44134016 | Msa0601450:CDS |
| TGGCTGCAGTAGGTAAAGGG+TGG | 0.628113 | 4_2:+44134499 | None:intergenic |
| AAATACTTGAAGAACAAGGA+AGG | 0.629779 | 4_2:+44134398 | None:intergenic |
| GTCACAGAAGGCAATAACAA+TGG | 0.641704 | 4_2:-44133968 | Msa0601450:CDS |
| TGATAATGTTGAGACACCAT+TGG | 0.665951 | 4_2:-44135722 | Msa0601450:CDS |
| AGACAACAAGACCAAGAGGG+AGG | 0.676991 | 4_2:-44137541 | Msa0601450:intron |
| AGAAGACAACAAGACCAAGA+GGG | 0.683090 | 4_2:-44137544 | Msa0601450:CDS |
| GTTGAAATACTTGAAGAACA+AGG | 0.687606 | 4_2:+44134394 | None:intergenic |
| TTTCTCGAAACACATCCGCA+TGG | 0.694478 | 4_2:+44136254 | None:intergenic |
| AATCTCCAGATACTCCACAA+AGG | 0.712273 | 4_2:-44134324 | Msa0601450:CDS |
| GAACATATTACAATACCATG+CGG | 0.739509 | 4_2:-44136269 | Msa0601450:CDS |
| ATCGGCGATGAAAAGCATCG+AGG | 0.778036 | 4_2:-44135791 | Msa0601450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | chr4_2:44134695-44134714 | None:intergenic | 0.0% |
| !! | TGTATTATACTTATAAATAT+AGG | + | chr4_2:44134848-44134867 | None:intergenic | 10.0% |
| !! | TGAATAAATAAATTCAAATT+AGG | + | chr4_2:44135200-44135219 | None:intergenic | 10.0% |
| !! | ACAATAAAAATAAATTCTTT+AGG | + | chr4_2:44136420-44136439 | None:intergenic | 10.0% |
| !! | TATAATGAGATATTGAATTA+TGG | + | chr4_2:44134233-44134252 | None:intergenic | 15.0% |
| !! | TTAACATGGTAATATAAAAT+TGG | + | chr4_2:44135003-44135022 | None:intergenic | 15.0% |
| !!! | TAGAATATTTTTATGTGATT+TGG | - | chr4_2:44135398-44135417 | Msa0601450:intron | 15.0% |
| !!! | ATATTTTTTTCACAAATAAG+AGG | + | chr4_2:44135426-44135445 | None:intergenic | 15.0% |
| !!! | ATGCATATTTTGATTTTTAA+TGG | + | chr4_2:44137235-44137254 | None:intergenic | 15.0% |
| !! | TAGGTTAATTAAAATACTTA+TGG | - | chr4_2:44137372-44137391 | Msa0601450:intron | 15.0% |
| !! | TAATACAATTCAAACTTAAT+AGG | - | chr4_2:44137425-44137444 | Msa0601450:intron | 15.0% |
| !! | TAATTTCTTTAAATTCAGCT+AGG | + | chr4_2:44134504-44134523 | None:intergenic | 20.0% |
| !! | ATTATCTATGGTTGAAATAA+GGG | + | chr4_2:44134914-44134933 | None:intergenic | 20.0% |
| !! | TATTATCTATGGTTGAAATA+AGG | + | chr4_2:44134915-44134934 | None:intergenic | 20.0% |
| !! | GAATGCATAAATATTATCTA+TGG | + | chr4_2:44134926-44134945 | None:intergenic | 20.0% |
| !! | TTCGTATTCATTAATTAACA+TGG | + | chr4_2:44135017-44135036 | None:intergenic | 20.0% |
| !! | TCATATATGTTAATTGATGT+AGG | - | chr4_2:44135050-44135069 | Msa0601450:intron | 20.0% |
| !! | TAAAATGTAACCATATGTAT+TGG | + | chr4_2:44135293-44135312 | None:intergenic | 20.0% |
| !! | ATAACACTATTAATATGATG+TGG | - | chr4_2:44135493-44135512 | Msa0601450:CDS | 20.0% |
| !! | AAAGGAAAATAATTCTTTGA+TGG | - | chr4_2:44135804-44135823 | Msa0601450:CDS | 20.0% |
| !!! | AAAGGAAAAGAAGTTTTTAA+TGG | - | chr4_2:44136038-44136057 | Msa0601450:CDS | 20.0% |
| !! | AAAATGATGATTAAATGACA+AGG | + | chr4_2:44137001-44137020 | None:intergenic | 20.0% |
| !!! | AATTTTGATTGGTTTTGATT+AGG | + | chr4_2:44137782-44137801 | None:intergenic | 20.0% |
| !! | TCTTCTACTGATAATAATAA+TGG | - | chr4_2:44137971-44137990 | Msa0601450:CDS | 20.0% |
| !! | ATCTACTATTGACTAAGAAA+GGG | + | chr4_2:44134035-44134054 | None:intergenic | 25.0% |
| !! | AGTAGAGTTTGATTTCTTTA+AGG | - | chr4_2:44134101-44134120 | Msa0601450:CDS | 25.0% |
| ! | TATGAATATGATCATTGTCA+GGG | + | chr4_2:44134167-44134186 | None:intergenic | 25.0% |
| ! | ATATGAATATGATCATTGTC+AGG | + | chr4_2:44134168-44134187 | None:intergenic | 25.0% |
| ! | TATGAATACACCATCTTTAT+TGG | - | chr4_2:44134185-44134204 | Msa0601450:CDS | 25.0% |
| !!! | TTATTTTTTCTTCAACAGCT+TGG | - | chr4_2:44134369-44134388 | Msa0601450:CDS | 25.0% |
| ! | AAAGGGAAAAAAATGTTCAT+CGG | + | chr4_2:44134530-44134549 | None:intergenic | 25.0% |
| !!! | AAAATCACTCAATTTTGACT+CGG | + | chr4_2:44134560-44134579 | None:intergenic | 25.0% |
| ! | TAGACATTCTTTAGATTTGA+AGG | - | chr4_2:44134590-44134609 | Msa0601450:intron | 25.0% |
| ! | TTATCTATGGTTGAAATAAG+GGG | + | chr4_2:44134913-44134932 | None:intergenic | 25.0% |
| !! | CTTTAACTTCCTTAAACTTA+TGG | + | chr4_2:44135788-44135807 | None:intergenic | 25.0% |
| ! | CATAAGTTTAAGGAAGTTAA+AGG | - | chr4_2:44135786-44135805 | Msa0601450:CDS | 25.0% |
| ! | TGGAAAATTTAAAGAGAAAG+AGG | - | chr4_2:44135824-44135843 | Msa0601450:CDS | 25.0% |
| ! | AATAAGGTTAAGGAAGTTAA+AGG | - | chr4_2:44135900-44135919 | Msa0601450:CDS | 25.0% |
| ! | CACAAAAAGAGAATAAAGAA+TGG | - | chr4_2:44135951-44135970 | Msa0601450:CDS | 25.0% |
| ! | AAAAAGAGAATAAAGAATGG+TGG | - | chr4_2:44135954-44135973 | Msa0601450:CDS | 25.0% |
| ! | ATTGACTACTATTAAGGTTA+AGG | - | chr4_2:44136010-44136029 | Msa0601450:CDS | 25.0% |
| ! | ATTAAGGTTAAGGAAGTTAA+AGG | - | chr4_2:44136020-44136039 | Msa0601450:CDS | 25.0% |
| ! | TAACATCTACATTCTTACTA+AGG | + | chr4_2:44136259-44136278 | None:intergenic | 25.0% |
| ! | AATAAATTCTTTAGGCGAAA+AGG | + | chr4_2:44136412-44136431 | None:intergenic | 25.0% |
| !! | AGATAATAAGATTTAGGACA+CGG | + | chr4_2:44136502-44136521 | None:intergenic | 25.0% |
| ! | CTGCAAAGATAATAAGATTT+AGG | + | chr4_2:44136508-44136527 | None:intergenic | 25.0% |
| ! | TAAATGCATGAATTATGGAA+TGG | + | chr4_2:44137192-44137211 | None:intergenic | 25.0% |
| ! | TCAAAATATGCATTGAAGTT+TGG | - | chr4_2:44137242-44137261 | Msa0601450:intron | 25.0% |
| ! | TTCAAACTTAATAGGTACAA+AGG | - | chr4_2:44137433-44137452 | Msa0601450:intron | 25.0% |
| ! | GTATAATCAAGTGTAATAGT+TGG | + | chr4_2:44137659-44137678 | None:intergenic | 25.0% |
| !! | CAAAACCAATCAAAATTTTC+TGG | - | chr4_2:44137785-44137804 | Msa0601450:intron | 25.0% |
| ! | AATAACAATGGTAATATCAC+AGG | - | chr4_2:44138049-44138068 | Msa0601450:CDS | 25.0% |
| ! | GATCTACTATTGACTAAGAA+AGG | + | chr4_2:44134036-44134055 | None:intergenic | 30.0% |
| !!! | TAGAGAGATTTGGTTTTCAT+TGG | + | chr4_2:44134061-44134080 | None:intergenic | 30.0% |
| ! | AGCTTTAGTTCCAATAAAGA+TGG | + | chr4_2:44134198-44134217 | None:intergenic | 30.0% |
| AGATTGATCACTACTAGTAT+TGG | + | chr4_2:44134412-44134431 | None:intergenic | 30.0% | |
| TAGTAGTGATCAATCTATGA+TGG | - | chr4_2:44134416-44134435 | Msa0601450:CDS | 30.0% | |
| AAGGGAAAAAAATGTTCATC+GGG | + | chr4_2:44134529-44134548 | None:intergenic | 30.0% | |
| ACCCATATAGACTACAATAT+GGG | - | chr4_2:44134651-44134670 | Msa0601450:intron | 30.0% | |
| ! | TCTTCACTACTCAAATTTTC+TGG | - | chr4_2:44135235-44135254 | Msa0601450:intron | 30.0% |
| ! | CTTCACTACTCAAATTTTCT+GGG | - | chr4_2:44135236-44135255 | Msa0601450:intron | 30.0% |
| ! | AACCATATGTATTGGTGATT+CGG | + | chr4_2:44135285-44135304 | None:intergenic | 30.0% |
| !!! | GTCAGTTTTATTGTTTTGTC+CGG | - | chr4_2:44135351-44135370 | Msa0601450:intron | 30.0% |
| CCAACAAAAACAAAATGCAT+TGG | + | chr4_2:44135520-44135539 | None:intergenic | 30.0% | |
| !!! | CCAATGCATTTTGTTTTTGT+TGG | - | chr4_2:44135517-44135536 | Msa0601450:CDS | 30.0% |
| CACGTGAATAAAACATGTTA+AGG | + | chr4_2:44135582-44135601 | None:intergenic | 30.0% | |
| ATCATCGCAAAAAATAGCTT+TGG | + | chr4_2:44135614-44135633 | None:intergenic | 30.0% | |
| ! | TTCTTTGAACTGTTTTCAGA+TGG | - | chr4_2:44135641-44135660 | Msa0601450:intron | 30.0% |
| GAACATATTACAATACCATG+CGG | - | chr4_2:44135736-44135755 | Msa0601450:CDS | 30.0% | |
| ATCGACTACTAATAAGGTTA+AGG | - | chr4_2:44135890-44135909 | Msa0601450:CDS | 30.0% | |
| GAAGTTTCTGATGGAAAATT+TGG | - | chr4_2:44135927-44135946 | Msa0601450:CDS | 30.0% | |
| !! | AAAAGGAAATTTGTTGATGC+TGG | - | chr4_2:44135987-44136006 | Msa0601450:CDS | 30.0% |
| AAGAAAAAGAGACTTGAGAA+TGG | - | chr4_2:44136071-44136090 | Msa0601450:CDS | 30.0% | |
| TTATTGTGTTAGATCACTGA+TGG | - | chr4_2:44136433-44136452 | Msa0601450:intron | 30.0% | |
| ! | GATAATAAGATTTAGGACAC+GGG | + | chr4_2:44136501-44136520 | None:intergenic | 30.0% |
| ATCTTATTATCTTTGCAGCA+TGG | - | chr4_2:44136510-44136529 | Msa0601450:intron | 30.0% | |
| ! | AGAAGAAAGTTACCTGTTTT+CGG | + | chr4_2:44136552-44136571 | None:intergenic | 30.0% |
| !! | TTGCGACATGTATTTTGAAA+CGG | + | chr4_2:44136603-44136622 | None:intergenic | 30.0% |
| TTAATGGTCAAAGTTGTGTA+TGG | - | chr4_2:44136785-44136804 | Msa0601450:intron | 30.0% | |
| TAATGGTCAAAGTTGTGTAT+GGG | - | chr4_2:44136786-44136805 | Msa0601450:intron | 30.0% | |
| TAATGCGAAAGCAATCATTA+GGG | + | chr4_2:44136887-44136906 | None:intergenic | 30.0% | |
| ATAATGCGAAAGCAATCATT+AGG | + | chr4_2:44136888-44136907 | None:intergenic | 30.0% | |
| ACTATGATCTAGGAAACAAT+CGG | + | chr4_2:44136956-44136975 | None:intergenic | 30.0% | |
| !! | AGAAACATGAGCTTTGAAAA+TGG | + | chr4_2:44137142-44137161 | None:intergenic | 30.0% |
| ! | CATGTTTCTATGCTAGAATA+TGG | - | chr4_2:44137153-44137172 | Msa0601450:intron | 30.0% |
| TCTATGCTAGAATATGGATT+TGG | - | chr4_2:44137159-44137178 | Msa0601450:intron | 30.0% | |
| ATGCGTAAATGCATGAATTA+TGG | + | chr4_2:44137197-44137216 | None:intergenic | 30.0% | |
| CAACAAACTCAAATCCAAAA+TGG | - | chr4_2:44137338-44137357 | Msa0601450:intron | 30.0% | |
| GTTGTAATCACAACTTATGA+AGG | - | chr4_2:44137474-44137493 | Msa0601450:intron | 30.0% | |
| !!! | AGTTGTTTTTGCCATTTCTT+TGG | + | chr4_2:44137529-44137548 | None:intergenic | 30.0% |
| AAATACTTGAAGAACAAGGA+AGG | + | chr4_2:44137610-44137629 | None:intergenic | 30.0% | |
| GTTGAAATACTTGAAGAACA+AGG | + | chr4_2:44137614-44137633 | None:intergenic | 30.0% | |
| !!! | GGTTTTGATTAGGTATTTGA+GGG | + | chr4_2:44137772-44137791 | None:intergenic | 30.0% |
| !!! | TGGTTTTGATTAGGTATTTG+AGG | + | chr4_2:44137773-44137792 | None:intergenic | 30.0% |
| !! | GTAGTCCAGAAAATTTTGAT+TGG | + | chr4_2:44137793-44137812 | None:intergenic | 30.0% |
| GTACTGCTAATAATTGTGAA+GGG | + | chr4_2:44137838-44137857 | None:intergenic | 30.0% | |
| !! | AAAATTTGGATTAGCAGCAA+TGG | + | chr4_2:44137888-44137907 | None:intergenic | 30.0% |
| GACAAAGATGCAAGAAAATT+TGG | + | chr4_2:44137902-44137921 | None:intergenic | 30.0% | |
| TGGGACTAAATTTCAACTCA+AGG | + | chr4_2:44133981-44134000 | None:intergenic | 35.0% | |
| ATTTAGTCCCAACGAAAACA+TGG | - | chr4_2:44133990-44134009 | Msa0601450:CDS | 35.0% | |
| !!! | AGAGATTTGGTTTTCATTGG+AGG | + | chr4_2:44134058-44134077 | None:intergenic | 35.0% |
| ! | CTACTCTTGTTTCATGAGAT+GGG | + | chr4_2:44134086-44134105 | None:intergenic | 35.0% |
| ! | TCTACTCTTGTTTCATGAGA+TGG | + | chr4_2:44134087-44134106 | None:intergenic | 35.0% |
| !! | CTACTAGTATTGGTAGTAAC+CGG | + | chr4_2:44134402-44134421 | None:intergenic | 35.0% |
| ! | GTCTTGTTGTCTTCTGAATT+AGG | + | chr4_2:44134456-44134475 | None:intergenic | 35.0% |
| TAATAACATTACCTCCCTCT+TGG | + | chr4_2:44134478-44134497 | None:intergenic | 35.0% | |
| !! | TTTGACTCGGTAAAACGAAA+GGG | + | chr4_2:44134547-44134566 | None:intergenic | 35.0% |
| !!! | TTTTGACTCGGTAAAACGAA+AGG | + | chr4_2:44134548-44134567 | None:intergenic | 35.0% |
| !! | TCTTTAGATTTGAAGGTGTC+TGG | - | chr4_2:44134597-44134616 | Msa0601450:intron | 35.0% |
| GACCCATATAGACTACAATA+TGG | - | chr4_2:44134650-44134669 | Msa0601450:intron | 35.0% | |
| GCCCATATTGTAGTCTATAT+GGG | + | chr4_2:44134655-44134674 | None:intergenic | 35.0% | |
| GTTGAAATAAGGGGAAGAAA+AGG | + | chr4_2:44134904-44134923 | None:intergenic | 35.0% | |
| TACCGAATCACCAATACATA+TGG | - | chr4_2:44135280-44135299 | Msa0601450:intron | 35.0% | |
| ACAGACATACACATAAACAC+CGG | + | chr4_2:44135373-44135392 | None:intergenic | 35.0% | |
| !! | ATGTTTTATTCACGTGTGAG+AGG | - | chr4_2:44135586-44135605 | Msa0601450:intron | 35.0% |
| TTTCAGATGGCTATTCTTCA+AGG | - | chr4_2:44135654-44135673 | Msa0601450:intron | 35.0% | |
| GATGCTAGACCATAAGTTTA+AGG | - | chr4_2:44135776-44135795 | Msa0601450:CDS | 35.0% | |
| TCTTGGATCGACTACTAATA+AGG | - | chr4_2:44135884-44135903 | Msa0601450:CDS | 35.0% | |
| AAAGGACAAGAAGTTTCTGA+TGG | - | chr4_2:44135918-44135937 | Msa0601450:CDS | 35.0% | |
| ! | ATGGTGGAGAATCAATGAAA+AGG | - | chr4_2:44135970-44135989 | Msa0601450:CDS | 35.0% |
| TGCTGGATTGACTACTATTA+AGG | - | chr4_2:44136004-44136023 | Msa0601450:CDS | 35.0% | |
| AAAAAGAGACTTGAGAATGG+TGG | - | chr4_2:44136074-44136093 | Msa0601450:CDS | 35.0% | |
| ! | TCTAGGTTTTCTCATTGATG+AGG | + | chr4_2:44136177-44136196 | None:intergenic | 35.0% |
| AATGAGAAAACCTAGAAGTC+AGG | - | chr4_2:44136181-44136200 | Msa0601450:intron | 35.0% | |
| ! | TGATAATGTTGAGACACCAT+TGG | - | chr4_2:44136283-44136302 | Msa0601450:CDS | 35.0% |
| AGCTAGATCAGAAGAAACTA+TGG | - | chr4_2:44136328-44136347 | Msa0601450:CDS | 35.0% | |
| TATGGACAAAAACTGTCGAA+AGG | - | chr4_2:44136472-44136491 | Msa0601450:intron | 35.0% | |
| !!! | GACATGTATTTTGAAACGGA+GGG | + | chr4_2:44136831-44136850 | None:intergenic | 35.0% |
| !! | CTGCGACATGTATTTTGAAA+CGG | - | chr4_2:44136827-44136846 | Msa0601450:intron | 35.0% |
| !!! | GACATGTATTTTGAAACGGA+TGG | - | chr4_2:44136831-44136850 | Msa0601450:intron | 35.0% |
| CATGTTTGTGACTATGATCT+AGG | + | chr4_2:44136966-44136985 | None:intergenic | 35.0% | |
| TATTTGATATGCATTGCACG+AGG | - | chr4_2:44137082-44137101 | Msa0601450:intron | 35.0% | |
| TTTAATGGTCATCAACGTGA+TGG | + | chr4_2:44137220-44137239 | None:intergenic | 35.0% | |
| ! | AAGGAGTTTGAAACTGATCT+GGG | + | chr4_2:44137709-44137728 | None:intergenic | 35.0% |
| ! | AAAGGAGTTTGAAACTGATC+TGG | + | chr4_2:44137710-44137729 | None:intergenic | 35.0% |
| ! | GCAAAACTCTGAGAGATTAA+AGG | + | chr4_2:44137728-44137747 | None:intergenic | 35.0% |
| GGTACTGCTAATAATTGTGA+AGG | + | chr4_2:44137839-44137858 | None:intergenic | 35.0% | |
| TAGCAGTACCAAATATTGCT+CGG | - | chr4_2:44137849-44137868 | Msa0601450:CDS | 35.0% | |
| TTCCATTATTGGTCATACTC+AGG | - | chr4_2:44137934-44137953 | Msa0601450:CDS | 35.0% | |
| GCTATCATTGTGATTTCCTT+CGG | + | chr4_2:44138008-44138027 | None:intergenic | 35.0% | |
| AGCAACAATAATGTCACAGA+AGG | - | chr4_2:44138025-44138044 | Msa0601450:CDS | 35.0% | |
| TAGCAACACTAATGATCAGA+AGG | - | chr4_2:44138072-44138091 | Msa0601450:CDS | 35.0% | |
| GGAAACGAGTTGTCATTAAC+TGG | + | chr4_2:44133943-44133962 | None:intergenic | 40.0% | |
| TCAAGGTTGTTTGTGTCTTC+AGG | + | chr4_2:44133964-44133983 | None:intergenic | 40.0% | |
| !! | GAAGCATCCATGTTTTCGTT+GGG | + | chr4_2:44134000-44134019 | None:intergenic | 40.0% |
| !! | TGAAGCATCCATGTTTTCGT+TGG | + | chr4_2:44134001-44134020 | None:intergenic | 40.0% |
| GAGATGGGATTAGAGAGATT+TGG | + | chr4_2:44134071-44134090 | None:intergenic | 40.0% | |
| ! | GTATTGGTAGTAACCGGAAT+GGG | + | chr4_2:44134396-44134415 | None:intergenic | 40.0% |
| !! | AGTATTGGTAGTAACCGGAA+TGG | + | chr4_2:44134397-44134416 | None:intergenic | 40.0% |
| AGAAGACAACAAGACCAAGA+GGG | - | chr4_2:44134461-44134480 | Msa0601450:CDS | 40.0% | |
| GGCCCATATTGTAGTCTATA+TGG | + | chr4_2:44134656-44134675 | None:intergenic | 40.0% | |
| TATGGTTGAAGTGAGAGTCT+TGG | + | chr4_2:44134677-44134696 | None:intergenic | 40.0% | |
| ! | GTATCGTATTGGTGCAATGA+CGG | + | chr4_2:44135263-44135282 | None:intergenic | 40.0% |
| !! | TTGGTGATTCGGTATCGTAT+TGG | + | chr4_2:44135274-44135293 | None:intergenic | 40.0% |
| CGAGCTTGAACGAAAGAAAA+TGG | - | chr4_2:44135677-44135696 | Msa0601450:intron | 40.0% | |
| GAGAAAGAGGAAACTGAGAA+TGG | - | chr4_2:44135837-44135856 | Msa0601450:CDS | 40.0% | |
| AAAGAGGAAACTGAGAATGG+TGG | - | chr4_2:44135840-44135859 | Msa0601450:CDS | 40.0% | |
| ACAAGATCTTTGCATTGCCT+TGG | + | chr4_2:44136110-44136129 | None:intergenic | 40.0% | |
| GAAACTCTTGCTTTCACCAA+TGG | + | chr4_2:44136302-44136321 | None:intergenic | 40.0% | |
| ! | AGATCACTGATGGATGTCAA+TGG | - | chr4_2:44136443-44136462 | Msa0601450:intron | 40.0% |
| GGATGTCAATGGAGAAAGTA+TGG | - | chr4_2:44136454-44136473 | Msa0601450:intron | 40.0% | |
| !!! | CGACATGTATTTTGAAACGG+AGG | + | chr4_2:44136830-44136849 | None:intergenic | 40.0% |
| ATGGTCGTTGTATCGAAGAT+TGG | + | chr4_2:44137273-44137292 | None:intergenic | 40.0% | |
| TTGTTGCATTCAGCGAATCT+AGG | + | chr4_2:44137324-44137343 | None:intergenic | 40.0% | |
| GTAATAGTTGGAAACGAAGC+AGG | + | chr4_2:44137647-44137666 | None:intergenic | 40.0% | |
| AATCTCCAGATACTCCACAA+AGG | - | chr4_2:44137681-44137700 | Msa0601450:intron | 40.0% | |
| AGCAGTACCAAATATTGCTC+GGG | - | chr4_2:44137850-44137869 | Msa0601450:CDS | 40.0% | |
| TTAACTGCCCGAGCAATATT+TGG | + | chr4_2:44137860-44137879 | None:intergenic | 40.0% | |
| ! | CCAATAATGGAAGTAAGAGC+AGG | + | chr4_2:44137926-44137945 | None:intergenic | 40.0% |
| CCTGCTCTTACTTCCATTAT+TGG | - | chr4_2:44137923-44137942 | Msa0601450:CDS | 40.0% | |
| TGCCTGAGTATGACCAATAA+TGG | + | chr4_2:44137939-44137958 | None:intergenic | 40.0% | |
| GTCACAGAAGGCAATAACAA+TGG | - | chr4_2:44138037-44138056 | Msa0601450:CDS | 40.0% | |
| ATGATCATTGTCAGGGACAG+AGG | + | chr4_2:44134160-44134179 | None:intergenic | 45.0% | |
| CAGAAGACAACAAGACCAAG+AGG | - | chr4_2:44134460-44134479 | Msa0601450:CDS | 45.0% | |
| CTATATGGGTCTGTCCATGT+GGG | + | chr4_2:44134641-44134660 | None:intergenic | 45.0% | |
| TCTATATGGGTCTGTCCATG+TGG | + | chr4_2:44134642-44134661 | None:intergenic | 45.0% | |
| GTGTGTGTGTGTGTGTTTCT+TGG | - | chr4_2:44134782-44134801 | Msa0601450:intron | 45.0% | |
| GTGTGTGTGTGTTTCTTGGT+TGG | - | chr4_2:44134786-44134805 | Msa0601450:intron | 45.0% | |
| TTTCTCGAAACACATCCGCA+TGG | + | chr4_2:44135754-44135773 | None:intergenic | 45.0% | |
| ! | AACTGAGAATGGTGGAGTAC+TGG | - | chr4_2:44135848-44135867 | Msa0601450:CDS | 45.0% |
| ! | ACTGAGAATGGTGGAGTACT+GGG | - | chr4_2:44135849-44135868 | Msa0601450:CDS | 45.0% |
| GTCGATCCAAGATCTTTCCT+CGG | + | chr4_2:44135876-44135895 | None:intergenic | 45.0% | |
| ! | ACTTGAGAATGGTGGAGAGT+TGG | - | chr4_2:44136082-44136101 | Msa0601450:CDS | 45.0% |
| TACTAATGCTGAGACTGCGA+TGG | - | chr4_2:44136136-44136155 | Msa0601450:intron | 45.0% | |
| AAGTCAGGACCAGTTAGGAT+CGG | - | chr4_2:44136196-44136215 | Msa0601450:intron | 45.0% | |
| ! | TTTTCATCGCCGATCCTAAC+TGG | + | chr4_2:44136208-44136227 | None:intergenic | 45.0% |
| ! | TTTTCGGACTGAGCAACCAT+GGG | + | chr4_2:44136536-44136555 | None:intergenic | 45.0% |
| ! | CGGAGGGAGTACATGTAATT+TGG | + | chr4_2:44136583-44136602 | None:intergenic | 45.0% |
| TGATATGCATTGCACGAGGT+TGG | - | chr4_2:44137086-44137105 | Msa0601450:intron | 45.0% | |
| ! | CTAGCTAGCAGCTACCATTT+TGG | + | chr4_2:44137355-44137374 | None:intergenic | 45.0% |
| CAAAATGGTAGCTGCTAGCT+AGG | - | chr4_2:44137353-44137372 | Msa0601450:intron | 45.0% | |
| CTTTGGCTGCAGTAGGTAAA+GGG | + | chr4_2:44137512-44137531 | None:intergenic | 45.0% | |
| TCTTTGGCTGCAGTAGGTAA+AGG | + | chr4_2:44137513-44137532 | None:intergenic | 45.0% | |
| ACCTACTGCAGCCAAAGAAA+TGG | - | chr4_2:44137515-44137534 | Msa0601450:intron | 45.0% | |
| !! | CAAGGAAGGAGTGTTCTTGT+GGG | + | chr4_2:44137596-44137615 | None:intergenic | 45.0% |
| !! | ACAAGGAAGGAGTGTTCTTG+TGG | + | chr4_2:44137597-44137616 | None:intergenic | 45.0% |
| AACTGATCTGGGTTCCTTTG+TGG | + | chr4_2:44137698-44137717 | None:intergenic | 45.0% | |
| TTGAGGGATCAAAGAAGCTG+AGG | + | chr4_2:44137756-44137775 | None:intergenic | 45.0% | |
| AATGGCAACAATGTCACCGA+AGG | - | chr4_2:44137989-44138008 | Msa0601450:CDS | 45.0% | |
| !! | TATATTAGTTAAAAAAAATA+TGG | + | chr4_2:44136662-44136681 | None:intergenic | 5.0% |
| !! | TATATAATTAAAGATATTAA+TGG | - | chr4_2:44136769-44136788 | Msa0601450:intron | 5.0% |
| TCAACAGCTTGGTCCCATTC+CGG | - | chr4_2:44134380-44134399 | Msa0601450:CDS | 50.0% | |
| AGACAACAAGACCAAGAGGG+AGG | - | chr4_2:44134464-44134483 | Msa0601450:CDS | 50.0% | |
| GTCAATGTGTGACACCCACA+TGG | - | chr4_2:44134624-44134643 | Msa0601450:intron | 50.0% | |
| !! | CTGAGAATGGTGGAGTACTG+GGG | - | chr4_2:44135850-44135869 | Msa0601450:CDS | 50.0% |
| CCTAACTGGTCCTGACTTCT+AGG | + | chr4_2:44136194-44136213 | None:intergenic | 50.0% | |
| CCTAGAAGTCAGGACCAGTT+AGG | - | chr4_2:44136191-44136210 | Msa0601450:intron | 50.0% | |
| !! | ATCGGCGATGAAAAGCATCG+AGG | - | chr4_2:44136214-44136233 | Msa0601450:intron | 50.0% |
| !! | AAGCATCGAGGTTGCTTCGA+AGG | - | chr4_2:44136226-44136245 | Msa0601450:intron | 50.0% |
| TATCTTTGCAGCATGGCCCA+TGG | - | chr4_2:44136517-44136536 | Msa0601450:intron | 50.0% | |
| ! | GTTTTCGGACTGAGCAACCA+TGG | + | chr4_2:44136537-44136556 | None:intergenic | 50.0% |
| TGGTTGCTCAGTCCGAAAAC+AGG | - | chr4_2:44136537-44136556 | Msa0601450:intron | 50.0% | |
| AGTAAGTACGTCGACGTCGA+TGG | + | chr4_2:44137292-44137311 | None:intergenic | 50.0% | |
| GCCATTTCTTTGGCTGCAGT+AGG | + | chr4_2:44137519-44137538 | None:intergenic | 50.0% | |
| ! | GGGTTCCTTTGTGGAGTATC+TGG | + | chr4_2:44137689-44137708 | None:intergenic | 50.0% |
| !! | ATGGTGGAGAGTTGGTGCCA+AGG | - | chr4_2:44136090-44136109 | Msa0601450:CDS | 55.0% |
| GTGTATGGGCATGTGTGCAG+TGG | - | chr4_2:44136800-44136819 | Msa0601450:intron | 55.0% | |
| TGGCTGCAGTAGGTAAAGGG+TGG | + | chr4_2:44137509-44137528 | None:intergenic | 55.0% | |
| CTGGGGCCGAGGAAAGATCT+TGG | - | chr4_2:44135867-44135886 | Msa0601450:CDS | 60.0% | |
| !! | ATGGTGGAGTACTGGGGCCG+AGG | - | chr4_2:44135856-44135875 | Msa0601450:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 44133928 | 44138099 | 44133928 | ID=Msa0601450;Name=Msa0601450 |
| chr4_2 | mRNA | 44133928 | 44138099 | 44133928 | ID=Msa0601450-mRNA-1;Parent=Msa0601450;Name=Msa0601450-mRNA-1;_AED=0.06;_eAED=0.11;_QI=0|0|0|1|1|1|6|0|552 |
| chr4_2 | exon | 44137806 | 44138099 | 44137806 | ID=Msa0601450-mRNA-1:exon:9729;Parent=Msa0601450-mRNA-1 |
| chr4_2 | exon | 44137542 | 44137640 | 44137542 | ID=Msa0601450-mRNA-1:exon:9728;Parent=Msa0601450-mRNA-1 |
| chr4_2 | exon | 44136254 | 44136367 | 44136254 | ID=Msa0601450-mRNA-1:exon:9727;Parent=Msa0601450-mRNA-1 |
| chr4_2 | exon | 44135678 | 44136121 | 44135678 | ID=Msa0601450-mRNA-1:exon:9726;Parent=Msa0601450-mRNA-1 |
| chr4_2 | exon | 44135469 | 44135582 | 44135469 | ID=Msa0601450-mRNA-1:exon:9725;Parent=Msa0601450-mRNA-1 |
| chr4_2 | exon | 44133928 | 44134521 | 44133928 | ID=Msa0601450-mRNA-1:exon:9724;Parent=Msa0601450-mRNA-1 |
| chr4_2 | CDS | 44137806 | 44138099 | 44137806 | ID=Msa0601450-mRNA-1:cds;Parent=Msa0601450-mRNA-1 |
| chr4_2 | CDS | 44137542 | 44137640 | 44137542 | ID=Msa0601450-mRNA-1:cds;Parent=Msa0601450-mRNA-1 |
| chr4_2 | CDS | 44136254 | 44136367 | 44136254 | ID=Msa0601450-mRNA-1:cds;Parent=Msa0601450-mRNA-1 |
| chr4_2 | CDS | 44135678 | 44136121 | 44135678 | ID=Msa0601450-mRNA-1:cds;Parent=Msa0601450-mRNA-1 |
| chr4_2 | CDS | 44135469 | 44135582 | 44135469 | ID=Msa0601450-mRNA-1:cds;Parent=Msa0601450-mRNA-1 |
| chr4_2 | CDS | 44133928 | 44134521 | 44133928 | ID=Msa0601450-mRNA-1:cds;Parent=Msa0601450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
