AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0610420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0610420 MtrunA17_Chr2g0276841 34.122 592 286 13 38 531 41 626 4.37e-97 313
Msa0610420 MtrunA17_Chr2g0294841 41.853 313 171 4 39 342 17 327 3.31e-73 250
Msa0610420 MtrunA17_Chr2g0294841 28.972 321 162 8 355 609 425 745 1.15e-30 128
Msa0610420 MtrunA17_Chr5g0431001 42.662 293 156 3 64 348 61 349 1.56e-70 237
Msa0610420 MtrunA17_Chr1g0198761 40.141 284 160 3 67 342 50 331 7.20e-65 228
Msa0610420 MtrunA17_Chr1g0198761 33.437 323 162 5 355 624 429 751 3.44e-47 177
Msa0610420 MtrunA17_Chr2g0290391 37.710 297 172 4 57 342 44 338 3.33e-59 211
Msa0610420 MtrunA17_Chr2g0290391 31.535 241 150 4 355 591 436 665 5.99e-26 113
Msa0610420 MtrunA17_Chr5g0402481 93.333 90 6 0 543 632 1 90 3.25e-52 175
Msa0610420 MtrunA17_Chr5g0448761 35.986 289 165 7 62 339 58 337 1.99e-43 167
Msa0610420 MtrunA17_Chr5g0448761 28.293 205 134 3 362 558 445 644 2.72e-20 95.5
Msa0610420 MtrunA17_Chr8g0363841 34.495 287 166 8 65 342 18 291 2.43e-40 157
Msa0610420 MtrunA17_Chr2g0287651 32.117 274 178 5 70 340 81 349 2.66e-40 158
Msa0610420 MtrunA17_Chr2g0287651 25.806 186 129 4 356 532 445 630 3.90e-12 69.7
Msa0610420 MtrunA17_Chr1g0202341 34.276 283 173 6 62 340 49 322 1.08e-37 149
Msa0610420 MtrunA17_Chr1g0202341 31.720 186 119 2 355 532 422 607 1.17e-22 102
Msa0610420 MtrunA17_Chr2g0296781 33.213 277 168 6 70 342 3 266 1.49e-37 149
Msa0610420 MtrunA17_Chr2g0296781 33.505 194 113 5 354 532 362 554 1.41e-17 87.0
Msa0610420 MtrunA17_Chr1g0203051 28.664 307 211 5 38 342 53 353 3.47e-37 147
Msa0610420 MtrunA17_Chr5g0440451 28.763 299 175 5 63 342 42 321 1.73e-34 140
Msa0610420 MtrunA17_Chr5g0440451 32.258 186 112 6 355 530 419 600 7.24e-19 91.3
Msa0610420 MtrunA17_Chr3g0082121 29.651 344 197 12 3 339 1 306 7.58e-34 137
Msa0610420 MtrunA17_Chr6g0458391 31.560 282 165 8 64 342 225 481 1.28e-32 134
Msa0610420 MtrunA17_Chr6g0458391 29.167 192 102 8 13 185 31 207 1.40e-11 67.8
Msa0610420 MtrunA17_Chr1g0207551 31.250 288 177 8 62 342 32 305 2.45e-30 127
Msa0610420 MtrunA17_Chr1g0207551 29.268 205 137 4 336 532 383 587 2.40e-20 95.9
Msa0610420 MtrunA17_Chr2g0287061 29.299 314 174 9 32 342 153 421 2.57e-30 127
Msa0610420 MtrunA17_Chr7g0258861 29.329 283 188 6 62 339 8 283 2.28e-29 118
Msa0610420 MtrunA17_Chr6g0477261 38.710 155 93 2 189 342 2 155 9.82e-29 121
Msa0610420 MtrunA17_Chr6g0477261 30.392 204 106 7 354 532 251 443 1.01e-16 84.0
Msa0610420 MtrunA17_Chr3g0080351 29.153 295 166 8 62 342 74 339 1.16e-27 119
Msa0610420 MtrunA17_Chr3g0080351 27.143 210 129 5 355 547 437 639 7.15e-17 84.7
Msa0610420 MtrunA17_Chr1g0203721 29.066 289 179 8 66 342 65 339 1.65e-27 118
Msa0610420 MtrunA17_Chr5g0441581 29.022 317 186 11 39 341 2 293 2.02e-27 117
Msa0610420 MtrunA17_Chr5g0441581 31.771 192 112 3 354 529 390 578 1.13e-18 90.5
Msa0610420 MtrunA17_Chr2g0329031 30.742 283 162 8 70 342 20 278 2.98e-27 117
Msa0610420 MtrunA17_Chr2g0329031 28.571 203 136 4 355 550 376 576 4.62e-17 85.5
Msa0610420 MtrunA17_Chr1g0196541 29.455 275 175 8 70 339 3 263 7.38e-27 116
Msa0610420 MtrunA17_Chr1g0196541 29.843 191 116 6 355 529 363 551 1.35e-11 67.8
Msa0610420 MtrunA17_Chr2g0324011 27.758 281 192 5 62 339 8 280 7.93e-26 112
Msa0610420 MtrunA17_Chr2g0324011 26.425 193 118 4 356 532 382 566 2.39e-13 73.2
Msa0610420 MtrunA17_Chr2g0291591 24.756 307 216 7 39 342 39 333 8.26e-24 105
Msa0610420 MtrunA17_Chr1g0164591 29.730 185 121 3 155 339 11 186 2.20e-22 98.6
Msa0610420 MtrunA17_Chr3g0118611 40.385 104 62 0 239 342 115 218 1.53e-21 99.8
Msa0610420 MtrunA17_Chr3g0118611 28.796 191 118 5 354 532 315 499 7.33e-15 78.2
Msa0610420 MtrunA17_Chr3g0081281 47.872 94 47 2 206 298 1 93 7.77e-21 87.4
Msa0610420 MtrunA17_Chr5g0448511 42.056 107 62 0 236 342 6 112 9.08e-21 96.3
Msa0610420 MtrunA17_Chr5g0448511 30.481 187 116 3 354 529 209 392 6.49e-20 94.0
Msa0610420 MtrunA17_Chr2g0291581 25.163 306 204 7 40 342 47 330 5.06e-19 91.3
Msa0610420 MtrunA17_Chr2g0291581 27.835 194 125 3 354 532 426 619 1.03e-12 71.2
Msa0610420 MtrunA17_Chr2g0329361 32.624 141 87 3 53 190 50 185 7.81e-16 77.8
Msa0610420 MtrunA17_Chr2g0329421 33.607 122 66 5 55 171 18 129 7.55e-14 71.2
Msa0610420 MtrunA17_Chr1g0171741 26.429 140 87 3 70 208 139 263 6.73e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0610420 AT1G10240.2 40.345 290 166 3 64 350 48 333 2.23e-70 241
Msa0610420 AT1G10240.2 37.222 180 110 2 355 531 425 604 2.99e-31 130
Msa0610420 AT1G10240.1 40.345 290 166 3 64 350 48 333 2.23e-70 241
Msa0610420 AT1G10240.1 37.222 180 110 2 355 531 425 604 2.99e-31 130
Msa0610420 AT5G28530.4 28.817 524 294 12 62 529 53 553 2.71e-62 218
Msa0610420 AT5G28530.5 29.008 524 289 12 62 529 53 549 3.02e-62 218
Msa0610420 AT5G28530.1 36.644 292 172 3 62 342 53 342 6.44e-60 213
Msa0610420 AT5G28530.1 31.844 179 116 3 355 529 440 616 2.81e-23 105
Msa0610420 AT5G28530.3 36.644 292 172 3 62 342 53 342 6.75e-60 213
Msa0610420 AT5G28530.3 32.402 179 111 3 355 529 440 612 2.65e-23 105
Msa0610420 AT5G28530.2 36.644 292 172 3 62 342 53 342 6.75e-60 213
Msa0610420 AT5G28530.2 32.402 179 111 3 355 529 440 612 2.65e-23 105
Msa0610420 AT4G38180.1 34.018 341 198 10 8 339 24 346 1.05e-45 174
Msa0610420 AT4G38180.1 29.947 187 123 2 354 532 446 632 2.19e-21 99.8
Msa0610420 AT1G76320.1 32.270 282 158 8 70 341 3 261 1.28e-31 131
Msa0610420 AT1G76320.1 29.834 181 122 3 354 529 359 539 7.54e-20 94.7
Msa0610420 AT1G76320.4 32.270 282 158 8 70 341 3 261 1.28e-31 131
Msa0610420 AT1G76320.4 29.834 181 122 3 354 529 359 539 7.54e-20 94.7
Msa0610420 AT1G76320.2 32.270 282 158 8 70 341 3 261 1.34e-31 131
Msa0610420 AT1G76320.2 29.834 181 122 3 354 529 359 539 8.57e-20 94.4
Msa0610420 AT1G76320.3 32.270 282 158 8 70 341 3 261 1.47e-31 130
Msa0610420 AT1G76320.3 29.834 181 122 3 354 529 359 539 8.69e-20 94.4
Msa0610420 AT4G15090.1 29.930 284 189 5 62 342 49 325 6.97e-30 126
Msa0610420 AT4G15090.1 29.032 186 123 3 355 532 423 607 2.35e-17 86.7
Msa0610420 AT4G15090.5 29.930 284 189 5 62 342 49 325 6.97e-30 126
Msa0610420 AT4G15090.5 29.032 186 123 3 355 532 423 607 2.35e-17 86.7
Msa0610420 AT4G15090.3 29.930 284 189 5 62 342 49 325 6.97e-30 126
Msa0610420 AT4G15090.3 29.032 186 123 3 355 532 423 607 2.35e-17 86.7
Msa0610420 AT4G15090.2 29.930 284 189 5 62 342 49 325 6.97e-30 126
Msa0610420 AT4G15090.2 29.032 186 123 3 355 532 423 607 2.35e-17 86.7
Msa0610420 AT4G15090.4 29.930 284 189 5 62 342 49 325 6.97e-30 126
Msa0610420 AT4G15090.4 29.032 186 123 3 355 532 423 607 2.35e-17 86.7
Msa0610420 AT2G27110.2 26.384 307 192 6 36 342 24 296 7.08e-27 117
Msa0610420 AT2G27110.2 28.922 204 132 6 355 549 394 593 9.40e-16 81.6
Msa0610420 AT2G27110.1 26.384 307 192 6 36 342 24 296 7.08e-27 117
Msa0610420 AT2G27110.1 28.922 204 132 6 355 549 394 593 9.40e-16 81.6
Msa0610420 AT3G22170.2 28.378 296 168 7 62 342 68 334 7.35e-27 117
Msa0610420 AT3G22170.2 28.796 191 129 3 353 536 430 620 6.14e-18 88.6
Msa0610420 AT3G22170.1 28.378 296 168 7 62 342 68 334 7.35e-27 117
Msa0610420 AT3G22170.1 28.796 191 129 3 353 536 430 620 6.14e-18 88.6
Msa0610420 AT3G06250.2 27.915 283 155 6 63 342 189 425 6.26e-24 107
Msa0610420 AT3G06250.2 29.648 199 126 6 355 542 520 715 2.22e-15 80.5
Msa0610420 AT3G06250.1 27.915 283 155 6 63 342 189 425 6.26e-24 107
Msa0610420 AT3G06250.1 29.648 199 126 6 355 542 520 715 2.22e-15 80.5
Msa0610420 AT3G06250.3 27.915 283 155 6 63 342 189 425 6.26e-24 107
Msa0610420 AT3G06250.3 29.648 199 126 6 355 542 520 715 2.22e-15 80.5
Msa0610420 AT5G18960.2 28.197 305 170 8 42 342 190 449 2.69e-23 105
Msa0610420 AT5G18960.2 26.341 205 135 5 355 547 544 744 5.91e-14 75.9
Msa0610420 AT5G18960.1 28.197 305 170 8 42 342 190 449 2.69e-23 105
Msa0610420 AT5G18960.1 26.341 205 135 5 355 547 544 744 5.91e-14 75.9
Msa0610420 AT4G38170.1 31.156 199 119 4 354 539 211 404 2.70e-23 104
Msa0610420 AT4G38170.1 40.000 100 55 2 244 342 19 114 5.27e-16 82.0
Msa0610420 AT1G80010.1 26.518 313 197 8 50 342 72 371 1.21e-20 97.1
Msa0610420 AT2G32250.5 26.619 278 153 6 67 342 41 269 1.52e-20 97.1
Msa0610420 AT2G32250.5 24.457 184 132 3 355 531 367 550 4.52e-11 66.6
Msa0610420 AT2G32250.2 26.619 278 153 6 67 342 41 269 1.55e-20 97.1
Msa0610420 AT2G32250.2 25.789 190 122 6 355 531 367 550 4.49e-11 66.6
Msa0610420 AT2G32250.4 26.619 278 153 6 67 342 41 269 1.55e-20 97.1
Msa0610420 AT2G32250.4 25.789 190 122 6 355 531 367 550 4.49e-11 66.6
Msa0610420 AT2G32250.6 26.619 278 153 6 67 342 41 269 1.64e-20 96.7
Msa0610420 AT2G32250.6 25.789 190 122 6 355 531 367 550 5.11e-11 66.6
Msa0610420 AT2G32250.1 26.619 278 153 6 67 342 41 269 1.64e-20 96.7
Msa0610420 AT2G32250.1 25.789 190 122 6 355 531 367 550 5.11e-11 66.6
Msa0610420 AT2G32250.3 26.619 278 153 6 67 342 41 269 1.64e-20 96.7
Msa0610420 AT2G32250.3 25.789 190 122 6 355 531 367 550 5.11e-11 66.6
Msa0610420 AT2G32250.8 26.545 275 151 6 70 342 3 228 2.51e-20 96.3
Msa0610420 AT2G32250.8 24.457 184 132 3 355 531 326 509 5.76e-11 66.2
Msa0610420 AT2G32250.7 26.545 275 151 6 70 342 3 228 2.80e-20 95.9
Msa0610420 AT2G32250.7 24.457 184 132 3 355 531 326 509 6.07e-11 66.2
Msa0610420 AT2G27110.3 39.604 101 61 0 242 342 51 151 5.63e-20 95.1
Msa0610420 AT2G27110.3 28.780 205 133 6 354 549 248 448 1.07e-15 81.3
Msa0610420 AT4G19990.3 29.897 194 127 4 354 538 370 563 5.23e-19 92.0
Msa0610420 AT4G19990.3 28.239 301 156 9 59 342 16 273 3.37e-17 86.3
Msa0610420 AT4G19990.4 29.897 194 127 4 354 538 370 563 5.23e-19 92.0
Msa0610420 AT4G19990.4 28.239 301 156 9 59 342 16 273 3.37e-17 86.3
Msa0610420 AT4G19990.7 29.897 194 127 4 354 538 384 577 5.61e-19 92.0
Msa0610420 AT4G19990.7 28.239 301 156 9 59 342 30 287 3.48e-17 86.3
Msa0610420 AT4G19990.1 29.897 194 127 4 354 538 313 506 5.94e-19 91.7
Msa0610420 AT4G19990.1 26.809 235 123 7 114 342 25 216 3.04e-11 67.0
Msa0610420 AT4G19990.5 29.897 194 127 4 354 538 370 563 6.72e-19 91.7
Msa0610420 AT4G19990.5 28.239 301 156 9 59 342 16 273 3.73e-17 85.9
Msa0610420 AT4G19990.6 29.897 194 127 4 354 538 370 563 7.10e-19 91.7
Msa0610420 AT4G19990.6 28.239 301 156 9 59 342 16 273 3.45e-17 86.3
Msa0610420 AT4G19990.2 29.897 194 127 4 354 538 370 563 7.10e-19 91.7
Msa0610420 AT4G19990.2 28.239 301 156 9 59 342 16 273 3.45e-17 86.3
Msa0610420 AT1G52520.1 24.503 302 195 9 51 342 69 347 9.39e-19 90.9
Msa0610420 AT1G52520.1 28.205 195 124 4 354 532 442 636 6.90e-15 78.6
Msa0610420 AT3G59470.2 27.957 186 95 6 15 171 9 184 2.49e-12 68.2
Msa0610420 AT3G59470.3 31.613 155 87 6 26 171 28 172 3.53e-12 67.4
Msa0610420 AT3G59470.1 31.613 155 87 6 26 171 28 172 3.53e-12 67.4

Find 96 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCACATGGTTCATTATT+TGG 0.125786 4_2:+58107727 None:intergenic
TATCTTCGTGGACATTTCTT+TGG 0.169134 4_2:-58106389 Msa0610420:CDS
GGAAGATCAGAGAGTATAAA+TGG 0.208991 4_2:-58106350 Msa0610420:CDS
TCAATAACTTGCCATTCTTT+TGG 0.220230 4_2:+58107367 None:intergenic
ATCTTCGTGGACATTTCTTT+GGG 0.252767 4_2:-58106388 Msa0610420:CDS
TTCTCTACATTCTCAATATA+TGG 0.254702 4_2:+58105495 None:intergenic
CTATTTCGTTGTTCTTTAGA+TGG 0.256140 4_2:+58107457 None:intergenic
AGCAACATTCACAAGTCTTA+TGG 0.258093 4_2:-58105719 Msa0610420:CDS
TGTATGAACTTAAGCAATAT+TGG 0.258316 4_2:-58106421 Msa0610420:CDS
CTTTGAACTTGCTCCTCTAT+AGG 0.259030 4_2:+58105852 None:intergenic
AGAAAACATTGTCCAATAAA+AGG 0.261110 4_2:+58107634 None:intergenic
TAAGACTTTAAATATAAAAT+AGG 0.262718 4_2:+58105249 None:intergenic
TTTGAACTTGCTCCTCTATA+GGG 0.267606 4_2:+58105853 None:intergenic
CCCAAAACAAAACGATTAAA+AGG 0.308689 4_2:-58105423 Msa0610420:CDS
TATCAACAGTGAATGCAAAT+TGG 0.310367 4_2:+58107044 None:intergenic
AATTCTTATAATATGCCTTT+TGG 0.310491 4_2:-58106920 Msa0610420:CDS
ATTATAAGAATTCACCTTGT+AGG 0.317528 4_2:+58106931 None:intergenic
AAAGACTAGAGAATATATTT+TGG 0.320756 4_2:-58107015 Msa0610420:CDS
GATTGAGAACCCACTCCTTT+TGG 0.334536 4_2:+58107573 None:intergenic
CTAAGTGAGGAAGAAGATTT+CGG 0.343265 4_2:-58107613 Msa0610420:CDS
TTTGAGTTGTACCAAGAGTA+TGG 0.355497 4_2:-58106977 Msa0610420:CDS
TGAATATCTTTCCGAAGAAA+TGG 0.356103 4_2:+58107163 None:intergenic
GCAAGGAAGCGCACTTGATC+TGG 0.359458 4_2:+58107310 None:intergenic
GTATGAACTTAAGCAATATT+GGG 0.366203 4_2:-58106420 Msa0610420:CDS
ATCTTGCCATTGAGGACATT+GGG 0.386566 4_2:-58105938 Msa0610420:CDS
CACGGAAGGACAATATTGTT+TGG 0.391122 4_2:-58106875 Msa0610420:CDS
CAAGCAAATAATGCGTGTTA+TGG 0.393145 4_2:-58107218 Msa0610420:CDS
CTTAGTGAAGTAGGACATAA+AGG 0.408462 4_2:-58105525 Msa0610420:CDS
ATGGTGATCTTCCATTTCTT+CGG 0.414681 4_2:-58107174 Msa0610420:CDS
GCAACATTCACAAGTCTTAT+GGG 0.421798 4_2:-58105718 Msa0610420:CDS
GAGAATTATGCCAAAAGGAG+TGG 0.432756 4_2:-58107583 Msa0610420:CDS
TTGCCCTCTCAAACTCCTCC+TGG 0.438199 4_2:+58105799 None:intergenic
AAAGGAGTGGGTTCTCAATC+CGG 0.438711 4_2:-58107570 Msa0610420:CDS
TTATGGGATGGTGATGTTGT+TGG 0.458032 4_2:-58105702 Msa0610420:CDS
CGATTTGAGCAACGACGAGC+AGG 0.460511 4_2:-58107686 Msa0610420:CDS
AACGAAATAGACAATCTTCA+AGG 0.467235 4_2:-58107444 Msa0610420:CDS
GGAACATAACCTTCTTTGTC+CGG 0.471805 4_2:+58105327 None:intergenic
TGGGTACCGGCTTATCTTCG+TGG 0.472632 4_2:-58106401 Msa0610420:CDS
ACACCATGTTGGATACATAC+AGG 0.474476 4_2:-58105899 Msa0610420:CDS
TCAAGGTGTGGATGCAAAGC+GGG 0.486956 4_2:-58107427 Msa0610420:CDS
ATTCACCAAGGTAAATTGAA+TGG 0.488078 4_2:-58107124 Msa0610420:CDS
AGCATGACATTTACTTCGAC+TGG 0.489278 4_2:+58105546 None:intergenic
TTTATGAGAATTATGCCAAA+AGG 0.493635 4_2:-58107588 Msa0610420:CDS
TTAGGTTGATCTTGCCATTG+AGG 0.494408 4_2:-58105946 Msa0610420:intron
CAACGACATCTCCATACTCT+TGG 0.499502 4_2:+58106966 None:intergenic
GAGGTAGTAAATCATGATTA+TGG 0.500482 4_2:+58107332 None:intergenic
AATGTCATGCTTAGTGAAGT+AGG 0.500833 4_2:-58105534 Msa0610420:CDS
CGTAATGGCAGATACCTTGT+TGG 0.505068 4_2:+58105594 None:intergenic
TCACAATGTTACAACTTGTC+CGG 0.507013 4_2:-58105346 Msa0610420:CDS
CTTCGTGGACATTTCTTTGG+GGG 0.512433 4_2:-58106386 Msa0610420:CDS
TCGATCATTATCCCCTATAG+AGG 0.513231 4_2:-58105865 Msa0610420:CDS
GATCTTGCCATTGAGGACAT+TGG 0.526255 4_2:-58105939 Msa0610420:CDS
CATCGCCATTCAATTTACCT+TGG 0.531578 4_2:+58107119 None:intergenic
TTGTTGCCCAATGTCCTCAA+TGG 0.536367 4_2:+58105932 None:intergenic
CCTCCACGTTCAATAACAAA+AGG 0.537673 4_2:-58105450 Msa0610420:CDS
ACAACTTGTCCGGACAAAGA+AGG 0.546455 4_2:-58105336 Msa0610420:CDS
TGCATTTGATACTACCTACA+AGG 0.547093 4_2:-58106945 Msa0610420:CDS
TCTTCGTGGACATTTCTTTG+GGG 0.547100 4_2:-58106387 Msa0610420:CDS
CACCATGTTGGATACATACA+GGG 0.548394 4_2:-58105898 Msa0610420:CDS
TCATCACGACACCAACGTAA+TGG 0.552128 4_2:+58105579 None:intergenic
GAAGATCAGAGAGTATAAAT+GGG 0.554653 4_2:-58106349 Msa0610420:CDS
ATTTACTGTGAAATATTACA+AGG 0.556334 4_2:-58105742 Msa0610420:CDS
TTGAACTTGCTCCTCTATAG+GGG 0.562876 4_2:+58105854 None:intergenic
ACTTAAGCAATATTGGGTAC+CGG 0.564662 4_2:-58106414 Msa0610420:CDS
TAGTAAATCATGATTATGGT+TGG 0.565674 4_2:+58107336 None:intergenic
AAAATGGGATGATACATAGG+AGG 0.572376 4_2:-58107528 Msa0610420:CDS
CTCAATCAATTGTTCTCATG+TGG 0.580264 4_2:-58108014 Msa0610420:CDS
AAATGTCCACGAAGATAAGC+CGG 0.581287 4_2:+58106395 None:intergenic
CATCTTCCTCAGAAATGTTG+CGG 0.581639 4_2:+58107281 None:intergenic
AAATGGGATGATACATAGGA+GGG 0.584474 4_2:-58107527 Msa0610420:CDS
GAAGTAGGACATAAAGGCAA+GGG 0.591654 4_2:-58105519 Msa0610420:CDS
TTCAAGGTGTGGATGCAAAG+CGG 0.592179 4_2:-58107428 Msa0610420:CDS
TTTGTTGGAATCGACAATCA+CGG 0.592924 4_2:-58106893 Msa0610420:CDS
AGTTCCAGGAGGAGTTTGAG+AGG 0.593892 4_2:-58105803 Msa0610420:CDS
AGAATTATGCCAAAAGGAGT+GGG 0.597719 4_2:-58107582 Msa0610420:CDS
ACAACTACATCACACCATGT+TGG 0.599668 4_2:-58105910 Msa0610420:CDS
AAATGTTGCGGTAAGATGCA+AGG 0.600031 4_2:+58107293 None:intergenic
GTTCCAGGAGGAGTTTGAGA+GGG 0.605391 4_2:-58105802 Msa0610420:CDS
TGAAGTAGGACATAAAGGCA+AGG 0.605684 4_2:-58105520 Msa0610420:CDS
AATAGACAATCTTCAAGGTG+TGG 0.612896 4_2:-58107439 Msa0610420:CDS
AAACTGTGTCTACATTTCGA+TGG 0.615252 4_2:-58106832 Msa0610420:CDS
AAGGTGGAATCGAATTGTCA+AGG 0.617786 4_2:-58105404 Msa0610420:CDS
CATTCACAAGTCTTATGGGA+TGG 0.622317 4_2:-58105714 Msa0610420:CDS
TACAACTCAAAGCAATGAGG+TGG 0.628223 4_2:+58106989 None:intergenic
AGGAAGCGCACTTGATCTGG+AGG 0.631105 4_2:+58107313 None:intergenic
ATCTTACCGCAACATTTCTG+AGG 0.633790 4_2:-58107287 Msa0610420:CDS
AAAACAAAACGATTAAAAGG+TGG 0.634811 4_2:-58105420 Msa0610420:CDS
TTCTTCAATAAGATTCACCA+AGG 0.638648 4_2:-58107136 Msa0610420:CDS
TTGGAATCGACAATCACGGA+AGG 0.649902 4_2:-58106889 Msa0610420:CDS
AGTGGGTTCTCAATCCGGAA+AGG 0.654585 4_2:-58107565 Msa0610420:CDS
ATTGCTTTCAAATTCCAACA+AGG 0.667427 4_2:-58105608 Msa0610420:CDS
TCCCCTGTATGTATCCAACA+TGG 0.681825 4_2:+58105896 None:intergenic
CAAGGTATCTGCCATTACGT+TGG 0.682443 4_2:-58105590 Msa0610420:CDS
TGGTACAACTCAAAGCAATG+AGG 0.685743 4_2:+58106986 None:intergenic
TGCGTTTAAGAAGTTCCAGG+AGG 0.692916 4_2:-58105814 Msa0610420:CDS
ACCATGTTGGATACATACAG+GGG 0.717001 4_2:-58105897 Msa0610420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGACTTTAAATATAAAAT+AGG + chr4_2:58108039-58108058 None:intergenic 10.0%
!!! AATTCAACAATAATATTTTG+TGG - chr4_2:58105433-58105452 Msa0610420:CDS 15.0%
!! TAATATGAATTTATTTGTGT+AGG - chr4_2:58105499-58105518 Msa0610420:CDS 15.0%
!!! TCTTTTTTTTCTATTAACTT+TGG - chr4_2:58106500-58106519 Msa0610420:intron 15.0%
!! AAAACATATAGAAAATACAT+GGG + chr4_2:58106559-58106578 None:intergenic 15.0%
!! AAAAACATATAGAAAATACA+TGG + chr4_2:58106560-58106579 None:intergenic 15.0%
!! AATGATACTTTAATAACTAA+TGG - chr4_2:58107289-58107308 Msa0610420:CDS 15.0%
!! TTGAGAACAATATAAGAAAA+AGG + chr4_2:58105345-58105364 None:intergenic 20.0%
!! AATTCGTATATAAGGAATTA+GGG + chr4_2:58105417-58105436 None:intergenic 20.0%
!! TATTGTTGAATTCGTATATA+AGG + chr4_2:58105425-58105444 None:intergenic 20.0%
!!! AATTGTTTTGAACCTTTTAT+TGG - chr4_2:58105639-58105658 Msa0610420:CDS 20.0%
!!! GTCGATTTCTTAAAAAAAAT+GGG - chr4_2:58105742-58105761 Msa0610420:CDS 20.0%
!!! AAAGACTAGAGAATATATTT+TGG - chr4_2:58106270-58106289 Msa0610420:intron 20.0%
!!! AATTCTTATAATATGCCTTT+TGG - chr4_2:58106365-58106384 Msa0610420:CDS 20.0%
!! AAACATATAGAAAATACATG+GGG + chr4_2:58106558-58106577 None:intergenic 20.0%
!! ATTTACTGTGAAATATTACA+AGG - chr4_2:58107543-58107562 Msa0610420:CDS 20.0%
! ATTCGTATATAAGGAATTAG+GGG + chr4_2:58105416-58105435 None:intergenic 25.0%
! GAATTCGTATATAAGGAATT+AGG + chr4_2:58105418-58105437 None:intergenic 25.0%
! TGAATTTATTTGTGTAGGTT+AGG - chr4_2:58105504-58105523 Msa0610420:CDS 25.0%
! TTATCACATGGTTCATTATT+TGG + chr4_2:58105561-58105580 None:intergenic 25.0%
!! TCATTTTCTGAATTATCACA+TGG + chr4_2:58105573-58105592 None:intergenic 25.0%
! AGAAAACATTGTCCAATAAA+AGG + chr4_2:58105654-58105673 None:intergenic 25.0%
! TTTATGAGAATTATGCCAAA+AGG - chr4_2:58105697-58105716 Msa0610420:CDS 25.0%
!! GGTCGATTTCTTAAAAAAAA+TGG - chr4_2:58105741-58105760 Msa0610420:CDS 25.0%
! AAAAAAATGGGATGATACAT+AGG - chr4_2:58105754-58105773 Msa0610420:CDS 25.0%
!!! GGATCATGATATTTTTTTTC+TGG + chr4_2:58105810-58105829 None:intergenic 25.0%
!!! TTCTTTTGGAAAAATCTCAA+AGG + chr4_2:58105907-58105926 None:intergenic 25.0%
!! TTGAGATTTTTCCAAAAGAA+TGG - chr4_2:58105907-58105926 Msa0610420:CDS 25.0%
! TAGTAAATCATGATTATGGT+TGG + chr4_2:58105952-58105971 None:intergenic 25.0%
! CTTGAGAAAAATGTTAAGTA+TGG - chr4_2:58106092-58106111 Msa0610420:intron 25.0%
! ATTATAAGAATTCACCTTGT+AGG + chr4_2:58106357-58106376 None:intergenic 25.0%
! AGTAATATGCCATATACAAA+AGG + chr4_2:58106695-58106714 None:intergenic 25.0%
! CATATTACTGCTAAATTTAG+TGG - chr4_2:58106706-58106725 Msa0610420:intron 25.0%
! AAGCAAAACAAACACATAAT+AGG - chr4_2:58106839-58106858 Msa0610420:CDS 25.0%
! TGTATGAACTTAAGCAATAT+TGG - chr4_2:58106864-58106883 Msa0610420:CDS 25.0%
! GTATGAACTTAAGCAATATT+GGG - chr4_2:58106865-58106884 Msa0610420:CDS 25.0%
! CAAAACATAGTATAAACACA+GGG + chr4_2:58107093-58107112 None:intergenic 25.0%
!!! TTGTAAGCATTTTGAGTTTT+GGG - chr4_2:58107612-58107631 Msa0610420:CDS 25.0%
! TTCTCTACATTCTCAATATA+TGG + chr4_2:58107793-58107812 None:intergenic 25.0%
!!! CCTTTTAATCGTTTTGTTTT+GGG + chr4_2:58107865-58107884 None:intergenic 25.0%
!!! ACCTTTTAATCGTTTTGTTT+TGG + chr4_2:58107866-58107885 None:intergenic 25.0%
! AAAACAAAACGATTAAAAGG+TGG - chr4_2:58107865-58107884 Msa0610420:intron 25.0%
!! TTTTAAGAAATCGACCTTTC+CGG + chr4_2:58105737-58105756 None:intergenic 30.0%
!!! TTTTTTCTGGAAATCCTTCT+CGG + chr4_2:58105797-58105816 None:intergenic 30.0%
CTATTTCGTTGTTCTTTAGA+TGG + chr4_2:58105831-58105850 None:intergenic 30.0%
AACGAAATAGACAATCTTCA+AGG - chr4_2:58105841-58105860 Msa0610420:CDS 30.0%
!! TCAATAACTTGCCATTCTTT+TGG + chr4_2:58105921-58105940 None:intergenic 30.0%
GAGGTAGTAAATCATGATTA+TGG + chr4_2:58105956-58105975 None:intergenic 30.0%
TGAATATCTTTCCGAAGAAA+TGG + chr4_2:58106125-58106144 None:intergenic 30.0%
TTCTTCAATAAGATTCACCA+AGG - chr4_2:58106149-58106168 Msa0610420:intron 30.0%
ATTCACCAAGGTAAATTGAA+TGG - chr4_2:58106161-58106180 Msa0610420:intron 30.0%
TATCAACAGTGAATGCAAAT+TGG + chr4_2:58106244-58106263 None:intergenic 30.0%
ATTCCAACAAAAATGCCAAA+AGG + chr4_2:58106383-58106402 None:intergenic 30.0%
!! TATACAAAAGGCATGTTTTG+TGG + chr4_2:58106683-58106702 None:intergenic 30.0%
! CAAAACATGCCTTTTGTATA+TGG - chr4_2:58106683-58106702 Msa0610420:intron 30.0%
TTACTGCTAAATTTAGTGGT+TGG - chr4_2:58106710-58106729 Msa0610420:intron 30.0%
!! TTGACGATTTTGAAGAAGAA+TGG - chr4_2:58106788-58106807 Msa0610420:CDS 30.0%
! TTTTGCTTCTAGATTGTACT+TGG + chr4_2:58106827-58106846 None:intergenic 30.0%
! GAAGATCAGAGAGTATAAAT+GGG - chr4_2:58106936-58106955 Msa0610420:CDS 30.0%
CCAAAACATAGTATAAACAC+AGG + chr4_2:58107094-58107113 None:intergenic 30.0%
! CCTGTGTTTATACTATGTTT+TGG - chr4_2:58107091-58107110 Msa0610420:CDS 30.0%
!! GTGTTTATACTATGTTTTGG+AGG - chr4_2:58107094-58107113 Msa0610420:CDS 30.0%
!!! TATGTTTTGGAGGATAGTTT+TGG - chr4_2:58107104-58107123 Msa0610420:CDS 30.0%
!!! GTTGTAAGCATTTTGAGTTT+TGG - chr4_2:58107611-58107630 Msa0610420:CDS 30.0%
!!! TGTAAGCATTTTGAGTTTTG+GGG - chr4_2:58107613-58107632 Msa0610420:CDS 30.0%
ATTGCTTTCAAATTCCAACA+AGG - chr4_2:58107677-58107696 Msa0610420:CDS 30.0%
CCCAAAACAAAACGATTAAA+AGG - chr4_2:58107862-58107881 Msa0610420:intron 30.0%
! TTCATTCTTCCTCTTTTTGA+TGG + chr4_2:58107992-58108011 None:intergenic 30.0%
CTCAATCAATTGTTCTCATG+TGG - chr4_2:58105271-58105290 Msa0610420:CDS 35.0%
! TGGACAATGTTTTCTAAGTG+AGG - chr4_2:58105659-58105678 Msa0610420:CDS 35.0%
CTAAGTGAGGAAGAAGATTT+CGG - chr4_2:58105672-58105691 Msa0610420:CDS 35.0%
AGAATTATGCCAAAAGGAGT+GGG - chr4_2:58105703-58105722 Msa0610420:CDS 35.0%
AAAATGGGATGATACATAGG+AGG - chr4_2:58105757-58105776 Msa0610420:CDS 35.0%
AAATGGGATGATACATAGGA+GGG - chr4_2:58105758-58105777 Msa0610420:CDS 35.0%
AATAGACAATCTTCAAGGTG+TGG - chr4_2:58105846-58105865 Msa0610420:CDS 35.0%
CAAGCAAATAATGCGTGTTA+TGG - chr4_2:58106067-58106086 Msa0610420:intron 35.0%
ATGGTGATCTTCCATTTCTT+CGG - chr4_2:58106111-58106130 Msa0610420:intron 35.0%
! ACAATTTTGTAAGTGTGCCA+AGG - chr4_2:58106202-58106221 Msa0610420:intron 35.0%
!! TTTGAGTTGTACCAAGAGTA+TGG - chr4_2:58106308-58106327 Msa0610420:CDS 35.0%
TGCATTTGATACTACCTACA+AGG - chr4_2:58106340-58106359 Msa0610420:CDS 35.0%
! ATGCCTTTTGGCATTTTTGT+TGG - chr4_2:58106377-58106396 Msa0610420:CDS 35.0%
TTTGTTGGAATCGACAATCA+CGG - chr4_2:58106392-58106411 Msa0610420:CDS 35.0%
AAACTGTGTCTACATTTCGA+TGG - chr4_2:58106453-58106472 Msa0610420:intron 35.0%
TGATCGGTAATGATTGTCTT+TGG + chr4_2:58106619-58106638 None:intergenic 35.0%
ACTTAAGCAATATTGGGTAC+CGG - chr4_2:58106871-58106890 Msa0610420:CDS 35.0%
TATCTTCGTGGACATTTCTT+TGG - chr4_2:58106896-58106915 Msa0610420:CDS 35.0%
ATCTTCGTGGACATTTCTTT+GGG - chr4_2:58106897-58106916 Msa0610420:CDS 35.0%
! GGAAGATCAGAGAGTATAAA+TGG - chr4_2:58106935-58106954 Msa0610420:CDS 35.0%
CCAAGGTGAAAACATTAACA+AGG + chr4_2:58107048-58107067 None:intergenic 35.0%
! CCTTGTTAATGTTTTCACCT+TGG - chr4_2:58107045-58107064 Msa0610420:CDS 35.0%
TTTACTCTACTCAAACACCA+AGG + chr4_2:58107065-58107084 None:intergenic 35.0%
AACATAGTATAAACACAGGG+AGG + chr4_2:58107090-58107109 None:intergenic 35.0%
! TATTTTGCTCTTCACAAGTG+TGG - chr4_2:58107193-58107212 Msa0610420:CDS 35.0%
! TTTGAACTTGCTCCTCTATA+GGG + chr4_2:58107435-58107454 None:intergenic 35.0%
! TTTTGCGTTTAAGAAGTTCC+AGG - chr4_2:58107468-58107487 Msa0610420:CDS 35.0%
AGCAACATTCACAAGTCTTA+TGG - chr4_2:58107566-58107585 Msa0610420:CDS 35.0%
! GCAACATTCACAAGTCTTAT+GGG - chr4_2:58107567-58107586 Msa0610420:CDS 35.0%
AATGTCATGCTTAGTGAAGT+AGG - chr4_2:58107751-58107770 Msa0610420:CDS 35.0%
CTTAGTGAAGTAGGACATAA+AGG - chr4_2:58107760-58107779 Msa0610420:CDS 35.0%
! TGTAGCTTTTGCAATAGAAG+TGG - chr4_2:58107916-58107935 Msa0610420:intron 35.0%
TCACAATGTTACAACTTGTC+CGG - chr4_2:58107939-58107958 Msa0610420:intron 35.0%
!!! CTCTTTTTGATGGTTGATGA+CGG + chr4_2:58107982-58108001 None:intergenic 35.0%
GAGAATTATGCCAAAAGGAG+TGG - chr4_2:58105702-58105721 Msa0610420:CDS 40.0%
!!! GATTTTTTCTGTCACCGAGA+AGG - chr4_2:58105780-58105799 Msa0610420:CDS 40.0%
AAATGTTGCGGTAAGATGCA+AGG + chr4_2:58105995-58106014 None:intergenic 40.0%
ATCTTACCGCAACATTTCTG+AGG - chr4_2:58105998-58106017 Msa0610420:intron 40.0%
CATCTTCCTCAGAAATGTTG+CGG + chr4_2:58106007-58106026 None:intergenic 40.0%
CATCGCCATTCAATTTACCT+TGG + chr4_2:58106169-58106188 None:intergenic 40.0%
! GAAGCAAGAGTTTTCATCCT+TGG + chr4_2:58106222-58106241 None:intergenic 40.0%
TACAACTCAAAGCAATGAGG+TGG + chr4_2:58106299-58106318 None:intergenic 40.0%
TGGTACAACTCAAAGCAATG+AGG + chr4_2:58106302-58106321 None:intergenic 40.0%
CACGGAAGGACAATATTGTT+TGG - chr4_2:58106410-58106429 Msa0610420:CDS 40.0%
TCATTACCGATCAAGATCCA+TGG - chr4_2:58106626-58106645 Msa0610420:intron 40.0%
!! CAAAAGGCATGTTTTGTGGA+TGG + chr4_2:58106679-58106698 None:intergenic 40.0%
AAATGTCCACGAAGATAAGC+CGG + chr4_2:58106893-58106912 None:intergenic 40.0%
TCTTCGTGGACATTTCTTTG+GGG - chr4_2:58106898-58106917 Msa0610420:CDS 40.0%
!!! GGAGGATAGTTTTGGACAAT+AGG - chr4_2:58107112-58107131 Msa0610420:CDS 40.0%
ACGTGTAGTATGCATCTGTT+AGG - chr4_2:58107138-58107157 Msa0610420:CDS 40.0%
AGTATGCATCTGTTAGGAGT+TGG - chr4_2:58107144-58107163 Msa0610420:CDS 40.0%
GTGTGGTTTATGCATCTGTT+AGG - chr4_2:58107210-58107229 Msa0610420:CDS 40.0%
!! TTAGGTTGATCTTGCCATTG+AGG - chr4_2:58107339-58107358 Msa0610420:CDS 40.0%
ATCTTGCCATTGAGGACATT+GGG - chr4_2:58107347-58107366 Msa0610420:CDS 40.0%
ACAACTACATCACACCATGT+TGG - chr4_2:58107375-58107394 Msa0610420:CDS 40.0%
ACACCATGTTGGATACATAC+AGG - chr4_2:58107386-58107405 Msa0610420:CDS 40.0%
CACCATGTTGGATACATACA+GGG - chr4_2:58107387-58107406 Msa0610420:CDS 40.0%
ACCATGTTGGATACATACAG+GGG - chr4_2:58107388-58107407 Msa0610420:CDS 40.0%
TCGATCATTATCCCCTATAG+AGG - chr4_2:58107420-58107439 Msa0610420:CDS 40.0%
! TTGAACTTGCTCCTCTATAG+GGG + chr4_2:58107434-58107453 None:intergenic 40.0%
! CTTTGAACTTGCTCCTCTAT+AGG + chr4_2:58107436-58107455 None:intergenic 40.0%
! CATTCACAAGTCTTATGGGA+TGG - chr4_2:58107571-58107590 Msa0610420:CDS 40.0%
! TTATGGGATGGTGATGTTGT+TGG - chr4_2:58107583-58107602 Msa0610420:CDS 40.0%
AGCATGACATTTACTTCGAC+TGG + chr4_2:58107742-58107761 None:intergenic 40.0%
TGAAGTAGGACATAAAGGCA+AGG - chr4_2:58107765-58107784 Msa0610420:CDS 40.0%
GAAGTAGGACATAAAGGCAA+GGG - chr4_2:58107766-58107785 Msa0610420:CDS 40.0%
!!! CCTTTTGTTATTGAACGTGG+AGG + chr4_2:58107838-58107857 None:intergenic 40.0%
CCTCCACGTTCAATAACAAA+AGG - chr4_2:58107835-58107854 Msa0610420:intron 40.0%
!!! CGACCTTTTGTTATTGAACG+TGG + chr4_2:58107841-58107860 None:intergenic 40.0%
AAGGTGGAATCGAATTGTCA+AGG - chr4_2:58107881-58107900 Msa0610420:intron 40.0%
GGAACATAACCTTCTTTGTC+CGG + chr4_2:58107961-58107980 None:intergenic 40.0%
CGTCATCAACCATCAAAAAG+AGG - chr4_2:58107980-58107999 Msa0610420:intron 40.0%
! GATTGAGAACCCACTCCTTT+TGG + chr4_2:58105715-58105734 None:intergenic 45.0%
! AAAGGAGTGGGTTCTCAATC+CGG - chr4_2:58105715-58105734 Msa0610420:CDS 45.0%
TTCAAGGTGTGGATGCAAAG+CGG - chr4_2:58105857-58105876 Msa0610420:CDS 45.0%
CAACGACATCTCCATACTCT+TGG + chr4_2:58106322-58106341 None:intergenic 45.0%
TTGGAATCGACAATCACGGA+AGG - chr4_2:58106396-58106415 Msa0610420:CDS 45.0%
CGTCATCCATGGATCTTGAT+CGG + chr4_2:58106635-58106654 None:intergenic 45.0%
CTTCGTGGACATTTCTTTGG+GGG - chr4_2:58106899-58106918 Msa0610420:CDS 45.0%
! TTTGGGGGTATGACAACAAC+AGG - chr4_2:58106914-58106933 Msa0610420:CDS 45.0%
GATCTTGCCATTGAGGACAT+TGG - chr4_2:58107346-58107365 Msa0610420:CDS 45.0%
TTGTTGCCCAATGTCCTCAA+TGG + chr4_2:58107356-58107375 None:intergenic 45.0%
TCCCCTGTATGTATCCAACA+TGG + chr4_2:58107392-58107411 None:intergenic 45.0%
TGCGTTTAAGAAGTTCCAGG+AGG - chr4_2:58107471-58107490 Msa0610420:CDS 45.0%
CGTAATGGCAGATACCTTGT+TGG + chr4_2:58107694-58107713 None:intergenic 45.0%
! CAAGGTATCTGCCATTACGT+TGG - chr4_2:58107695-58107714 Msa0610420:CDS 45.0%
TCATCACGACACCAACGTAA+TGG + chr4_2:58107709-58107728 None:intergenic 45.0%
ACAACTTGTCCGGACAAAGA+AGG - chr4_2:58107949-58107968 Msa0610420:intron 45.0%
!!! TTTTTTTTATCTAATATTTT+AGG - chr4_2:58107321-58107340 Msa0610420:CDS 5.0%
! AGTGGGTTCTCAATCCGGAA+AGG - chr4_2:58105720-58105739 Msa0610420:CDS 50.0%
TCAAGGTGTGGATGCAAAGC+GGG - chr4_2:58105858-58105877 Msa0610420:CDS 50.0%
TCAAGATCCATGGATGACGC+AGG - chr4_2:58106636-58106655 Msa0610420:intron 50.0%
AGTTCCAGGAGGAGTTTGAG+AGG - chr4_2:58107482-58107501 Msa0610420:CDS 50.0%
GTTCCAGGAGGAGTTTGAGA+GGG - chr4_2:58107483-58107502 Msa0610420:CDS 50.0%
CGATTTGAGCAACGACGAGC+AGG - chr4_2:58105599-58105618 Msa0610420:CDS 55.0%
! AGGAAGCGCACTTGATCTGG+AGG + chr4_2:58105975-58105994 None:intergenic 55.0%
! GCAAGGAAGCGCACTTGATC+TGG + chr4_2:58105978-58105997 None:intergenic 55.0%
GCAATTGCCTGCGTCATCCA+TGG + chr4_2:58106646-58106665 None:intergenic 55.0%
!! TGGGTACCGGCTTATCTTCG+TGG - chr4_2:58106884-58106903 Msa0610420:CDS 55.0%
TTGCCCTCTCAAACTCCTCC+TGG + chr4_2:58107489-58107508 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 58105248 58108059 58105248 ID=Msa0610420;Name=Msa0610420
chr4_2 mRNA 58105248 58108059 58105248 ID=Msa0610420-mRNA-1;Parent=Msa0610420;Name=Msa0610420-mRNA-1;_AED=0.04;_eAED=0.06;_QI=0|0|0|1|0.66|0.75|4|0|642
chr4_2 exon 58108001 58108059 58108001 ID=Msa0610420-mRNA-1:exon:15265;Parent=Msa0610420-mRNA-1
chr4_2 exon 58106786 58107786 58106786 ID=Msa0610420-mRNA-1:exon:15264;Parent=Msa0610420-mRNA-1
chr4_2 exon 58106295 58106446 58106295 ID=Msa0610420-mRNA-1:exon:15263;Parent=Msa0610420-mRNA-1
chr4_2 exon 58105248 58105964 58105248 ID=Msa0610420-mRNA-1:exon:15262;Parent=Msa0610420-mRNA-1
chr4_2 CDS 58108001 58108059 58108001 ID=Msa0610420-mRNA-1:cds;Parent=Msa0610420-mRNA-1
chr4_2 CDS 58106786 58107786 58106786 ID=Msa0610420-mRNA-1:cds;Parent=Msa0610420-mRNA-1
chr4_2 CDS 58106295 58106446 58106295 ID=Msa0610420-mRNA-1:cds;Parent=Msa0610420-mRNA-1
chr4_2 CDS 58105248 58105964 58105248 ID=Msa0610420-mRNA-1:cds;Parent=Msa0610420-mRNA-1
Gene Sequence

>Msa0610420

ATGGATATGGCAAGTGCTCAGAACTCAATCAATTGTTCTCATGTGGCAGCTATAGCACAGTTAGGAGTCACAGATTTAATTGATTTGAACAATGTTCCAAATAATGAACCATGTGATAATTCAGAAAATGAAGTAATCGATTTGAGCAACGACGAGCAGGAAACAATTACTATCAAAAATTGTTTTGAACCTTTTATTGGACAATGTTTTCTAAGTGAGGAAGAAGATTTCGGATTTTATGAGAATTATGCCAAAAGGAGTGGGTTCTCAATCCGGAAAGGTCGATTTCTTAAAAAAAATGGGATGATACATAGGAGGGATTTTTTCTGTCACCGAGAAGGATTTCCAGAAAAAAAATATCATGATCCATCTAAAGAACAACGAAATAGACAATCTTCAAGGTGTGGATGCAAAGCGGGCATGACAATCAAATTGAAGAAATCCTTTGAGATTTTTCCAAAAGAATGGCAAGTTATTGAACTTATATCCAACCATAATCATGATTTACTACCTCCAGATCAAGTGCGCTTCCTTGCATCTTACCGCAACATTTCTGAGGAAGATGAGAAGCGAATTTCGTTATTAAAAGAAGCTGATCTTTTAGTCAAGCAAATAATGCGTGTTATGGAGCTTGAGAAAAATGTTAAGTATGGTGATCTTCCATTTCTTCGGAAAGATATTCATAATTTCTTCAATAAGATTCACCAAGGTAAATTGAATGGCGATGCTGATGATCTTTTACAATTTTGTAAGTGTGCCAAGGATGAAAACTCTTGCTTCCAATTTGCATTCACTGTTGATAAAGAAAAAAGACTAGAGAATATATTTTGGTCTCCACCTCATTGCTTTGAGTTGTACCAAGAGTATGGAGATGTCGTTGCATTTGATACTACCTACAAGGTGAATTCTTATAATATGCCTTTTGGCATTTTTGTTGGAATCGACAATCACGGAAGGACAATATTGTTTGGTTGCGCGCTCATTCGAAATGAAACTGTGTCTACATTTCGATGGTTAATGAAAGTTAGTTCATATACATCTTTTTTTTCTATTAACTTTGGCTTGTATGAACTTAAGCAATATTGGGTACCGGCTTATCTTCGTGGACATTTCTTTGGGGGTATGACAACAACAGGAAGATCAGAGAGTATAAATGGGTTTGTGAAACGCTTTACTTCATCTCGTTCAAGTTTATTTCAACTTTTCAAACAAGTTGATCTTGCCATTGAGGACATTGGGCAACAACAACTACATCACACCATGTTGGATACATACAGGGGATCTTCACTTCGATCATTATCCCCTATAGAGGAGCAAGTTCAAAGTATTTTCACAAATTTTGCGTTTAAGAAGTTCCAGGAGGAGTTTGAGAGGGCAACTCAATACAAGATTTGTGAAGAAAAGCATGTAGAATTTACTGTGAAATATTACAAGGAGCAACATTCACAAGTCTTATGGGATGGTGATGTTGTTGGTTTTAGTTGTAAGCATTTTGAGTTTTGGGGTATTCTTTGTCGTCATGTGTTGACAATATTTCTTCATAAAGATTGCTTTCAAATTCCAACAAGGTATCTGCCATTACGTTGGTGTCGTGATGAATTTCAACGACCAGTCGAAGTAAATGTCATGCTTAGTGAAGTAGGACATAAAGGCAAGGGTCCATATATTGAGAATGTAGAGAATGCAGTAGAGTTTATTATCAATCCTCCACGTTCAATAACAAAAGGTCGTCCCAAAACAAAACGATTAAAAGGTGGAATCGAATTGTCAAGGAAAGCAAGAAGTTGTAGCTTTTGCAATAGAAGTGGTCACAATGTTACAACTTGTCCGGACAAAGAAGGTTATGTTCCGTCATCAACCATCAAAAAGAGGAAGAATGAAGCTCAAGCACAACAAAATTTAAATCCTATTTTATATTTAAAGTCTTAG
Protein sequence

>Msa0610420

MDMASAQNSINCSHVAAIAQLGVTDLIDLNNVPNNEPCDNSENEVIDLSNDEQETITIKNCFEPFIGQCFLSEEEDFGFYENYAKRSGFSIRKGRFLKKNGMIHRRDFFCHREGFPEKKYHDPSKEQRNRQSSRCGCKAGMTIKLKKSFEIFPKEWQVIELISNHNHDLLPPDQVRFLASYRNISEEDEKRISLLKEADLLVKQIMRVMELEKNVKYGDLPFLRKDIHNFFNKIHQGKLNGDADDLLQFCKCAKDENSCFQFAFTVDKEKRLENIFWSPPHCFELYQEYGDVVAFDTTYKVNSYNMPFGIFVGIDNHGRTILFGCALIRNETVSTFRWLMKVSSYTSFFSINFGLYELKQYWVPAYLRGHFFGGMTTTGRSESINGFVKRFTSSRSSLFQLFKQVDLAIEDIGQQQLHHTMLDTYRGSSLRSLSPIEEQVQSIFTNFAFKKFQEEFERATQYKICEEKHVEFTVKYYKEQHSQVLWDGDVVGFSCKHFEFWGILCRHVLTIFLHKDCFQIPTRYLPLRWCRDEFQRPVEVNVMLSEVGHKGKGPYIENVENAVEFIINPPRSITKGRPKTKRLKGGIELSRKARSCSFCNRSGHNVTTCPDKEGYVPSSTIKKRKNEAQAQQNLNPILYLKS*