Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615950 | XP_013457399.1 | 98.765 | 486 | 6 | 0 | 1 | 486 | 1 | 486 | 0.0 | 997 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615950 | sp|Q8GX46|BH091_ARATH | 36.187 | 514 | 195 | 12 | 11 | 481 | 1 | 424 | 5.02e-89 | 281 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0615950 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615950 | MtrunA17_Chr4g0052841 | 98.765 | 486 | 6 | 0 | 1 | 486 | 1 | 486 | 0.0 | 997 |
| Msa0615950 | MtrunA17_Chr4g0052821 | 79.596 | 495 | 73 | 8 | 1 | 482 | 1 | 480 | 0.0 | 742 |
| Msa0615950 | MtrunA17_Chr3g0131691 | 28.643 | 199 | 129 | 5 | 278 | 470 | 285 | 476 | 2.35e-16 | 81.6 |
| Msa0615950 | MtrunA17_Chr0c01g0489461 | 24.500 | 200 | 134 | 3 | 293 | 477 | 197 | 394 | 1.23e-12 | 69.3 |
| Msa0615950 | MtrunA17_Chr1g0185621 | 30.872 | 149 | 85 | 4 | 293 | 433 | 476 | 614 | 3.17e-12 | 68.9 |
| Msa0615950 | MtrunA17_Chr8g0346161 | 28.049 | 164 | 83 | 5 | 293 | 443 | 292 | 433 | 4.93e-12 | 67.8 |
| Msa0615950 | MtrunA17_Chr7g0252041 | 24.468 | 188 | 129 | 4 | 291 | 470 | 285 | 467 | 1.82e-11 | 66.2 |
| Msa0615950 | MtrunA17_Chr8g0366751 | 31.579 | 171 | 110 | 3 | 293 | 460 | 463 | 629 | 2.83e-11 | 65.9 |
| Msa0615950 | MtrunA17_Chr5g0411341 | 29.630 | 189 | 117 | 5 | 293 | 471 | 494 | 676 | 6.96e-11 | 64.7 |
| Msa0615950 | MtrunA17_Chr8g0346151 | 30.968 | 155 | 93 | 6 | 293 | 443 | 280 | 424 | 7.51e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615950 | AT2G31210.1 | 36.187 | 514 | 195 | 12 | 11 | 481 | 1 | 424 | 5.11e-90 | 281 |
| Msa0615950 | AT2G31220.1 | 36.257 | 513 | 209 | 15 | 16 | 481 | 2 | 443 | 3.05e-82 | 262 |
| Msa0615950 | AT2G31220.2 | 36.257 | 513 | 209 | 15 | 16 | 481 | 13 | 454 | 4.10e-82 | 262 |
| Msa0615950 | AT1G06170.2 | 37.423 | 489 | 201 | 17 | 11 | 480 | 6 | 408 | 5.20e-82 | 260 |
| Msa0615950 | AT1G06170.1 | 37.423 | 489 | 201 | 17 | 11 | 480 | 6 | 408 | 5.20e-82 | 260 |
| Msa0615950 | AT2G31215.1 | 50.704 | 71 | 35 | 0 | 284 | 354 | 15 | 85 | 1.02e-14 | 71.2 |
| Msa0615950 | AT3G26744.1 | 26.738 | 187 | 126 | 4 | 291 | 471 | 306 | 487 | 2.89e-12 | 69.3 |
| Msa0615950 | AT3G26744.4 | 26.738 | 187 | 126 | 4 | 291 | 471 | 306 | 487 | 2.89e-12 | 69.3 |
| Msa0615950 | AT3G26744.2 | 26.738 | 187 | 126 | 4 | 291 | 471 | 306 | 487 | 2.89e-12 | 69.3 |
| Msa0615950 | AT3G26744.6 | 27.976 | 168 | 111 | 3 | 291 | 453 | 306 | 468 | 4.13e-12 | 68.6 |
| Msa0615950 | AT1G32640.1 | 29.592 | 196 | 102 | 7 | 261 | 437 | 410 | 588 | 4.17e-12 | 68.9 |
| Msa0615950 | AT1G12860.2 | 27.439 | 164 | 113 | 3 | 291 | 453 | 266 | 424 | 6.38e-12 | 67.8 |
| Msa0615950 | AT3G24140.1 | 25.000 | 204 | 130 | 5 | 293 | 477 | 199 | 398 | 6.70e-12 | 67.8 |
| Msa0615950 | AT3G24140.2 | 25.000 | 204 | 130 | 5 | 293 | 477 | 199 | 398 | 8.20e-12 | 67.4 |
| Msa0615950 | AT5G46760.1 | 34.459 | 148 | 85 | 4 | 293 | 437 | 416 | 554 | 1.93e-11 | 66.6 |
| Msa0615950 | AT1G12860.1 | 29.054 | 148 | 99 | 3 | 291 | 437 | 266 | 408 | 2.09e-11 | 66.2 |
Find 131 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTCATTGAATTATGAAAAT+TGG | 0.123720 | 4_2:-65569666 | None:intergenic |
| GATGGAGGGAGATGGGGATA+TGG | 0.225091 | 4_2:+65569877 | Msa0615950:CDS |
| GACATCAACCTCACTGTCTT+TGG | 0.255758 | 4_2:-65570533 | None:intergenic |
| GTTGTTTGTGTTGTTATCAT+TGG | 0.285682 | 4_2:-65569180 | None:intergenic |
| CAGATAGTTGGTGGTGTTCT+TGG | 0.287318 | 4_2:-65569460 | None:intergenic |
| GGACCCTAGTGTTCAGGATA+TGG | 0.288747 | 4_2:+65569424 | Msa0615950:CDS |
| GCTGTTTGTGTCCAAGGTTT+TGG | 0.309859 | 4_2:+65570615 | Msa0615950:CDS |
| GTCATTGAATTATGAAAATT+GGG | 0.338556 | 4_2:-65569665 | None:intergenic |
| AGTGAATGAACTGAAATTAT+TGG | 0.342875 | 4_2:+65570378 | Msa0615950:CDS |
| AGGGATTGTAGCTTTGGTTA+TGG | 0.348857 | 4_2:-65569517 | None:intergenic |
| TTGGAACTTCATCATGTTGC+AGG | 0.351895 | 4_2:+65570649 | Msa0615950:CDS |
| CAAAACATGCATGAACAAAA+TGG | 0.364773 | 4_2:+65569113 | Msa0615950:CDS |
| AGCTGTAACATAAAGCCTTT+TGG | 0.367904 | 4_2:+65570466 | Msa0615950:CDS |
| TTGTTTACCTTGGTGGGACT+TGG | 0.369352 | 4_2:-65570034 | None:intergenic |
| CTCCACAGCCTCCAGCTCTC+AGG | 0.376170 | 4_2:+65569774 | Msa0615950:CDS |
| ATTGAACAACAACAAAATCT+TGG | 0.381255 | 4_2:+65569329 | Msa0615950:CDS |
| ATGGAGGGAGATGGGGATAT+GGG | 0.387229 | 4_2:+65569878 | Msa0615950:CDS |
| GTGATGAGATGGAGGGAGAT+GGG | 0.388952 | 4_2:+65569870 | Msa0615950:CDS |
| TGGGAGTGCTGGAATTCAAT+AGG | 0.389828 | 4_2:+65569897 | Msa0615950:CDS |
| ATGGTTATCCATGTTGTTGT+AGG | 0.394415 | 4_2:-65569369 | None:intergenic |
| TGGTCGAGGGATTGTAGCTT+TGG | 0.400036 | 4_2:-65569523 | None:intergenic |
| GATGTTTCCACTTATACAAA+TGG | 0.405425 | 4_2:+65569284 | Msa0615950:CDS |
| CAACAGGGTGATTGATGTTA+TGG | 0.412367 | 4_2:+65570852 | Msa0615950:CDS |
| TTTCTTGGAGACCTTCCAAT+AGG | 0.414923 | 4_2:+65569689 | Msa0615950:CDS |
| CAAAATCTTGGTTTGAACAT+AGG | 0.414981 | 4_2:+65569341 | Msa0615950:CDS |
| TTTCTCAGTTGCAAAATGTT+TGG | 0.419556 | 4_2:-65569960 | None:intergenic |
| TTGTTTGTGTTGTTATCATT+GGG | 0.420602 | 4_2:-65569179 | None:intergenic |
| GATATTGTTGTTCAGATAGT+TGG | 0.421325 | 4_2:-65569472 | None:intergenic |
| TTGCTTGCTGTTTGTGTCCA+AGG | 0.421896 | 4_2:+65570609 | Msa0615950:CDS |
| AAAATCTTGGTTTGAACATA+GGG | 0.427616 | 4_2:+65569342 | Msa0615950:CDS |
| TCCCTGAGAGCTGGAGGCTG+TGG | 0.430359 | 4_2:-65569776 | None:intergenic |
| ACACCTTCATCCATTGTGTT+GGG | 0.431032 | 4_2:-65569146 | None:intergenic |
| CAACAACATGGATAACCATT+TGG | 0.435263 | 4_2:+65569373 | Msa0615950:CDS |
| GAGTTGGGACCCTAGTGTTC+AGG | 0.436779 | 4_2:+65569418 | Msa0615950:CDS |
| GGTGATGAGATGGAGGGAGA+TGG | 0.442415 | 4_2:+65569869 | Msa0615950:CDS |
| ATGCAAGTGCTATAGCCAAC+AGG | 0.446313 | 4_2:+65570836 | Msa0615950:CDS |
| GAGGTTCTTATACTTCCATC+TGG | 0.453935 | 4_2:-65570493 | None:intergenic |
| GTGTTGTCTGATGATCCTAT+TGG | 0.454473 | 4_2:-65569704 | None:intergenic |
| AGTGAATCCATTTGTATAAG+TGG | 0.457197 | 4_2:-65569291 | None:intergenic |
| AGATGGGGATATGGGAGTGC+TGG | 0.457752 | 4_2:+65569886 | Msa0615950:CDS |
| ATGCCAACCAACTCGAGAAA+TGG | 0.461019 | 4_2:+65569830 | Msa0615950:CDS |
| AAGAGAACCATTTCTCGAGT+TGG | 0.464839 | 4_2:-65569837 | None:intergenic |
| ATAGCAATGAGTTCAGGTTC+AGG | 0.465445 | 4_2:+65569083 | None:intergenic |
| AACACCTTCATCCATTGTGT+TGG | 0.467861 | 4_2:-65569147 | None:intergenic |
| CAAAGAAGAGAGCAATTGAA+TGG | 0.475530 | 4_2:+65569983 | Msa0615950:CDS |
| TAACATCATCATCGATAATC+CGG | 0.477440 | 4_2:-65570555 | None:intergenic |
| GATACACTTCTTGTACCAAA+TGG | 0.479122 | 4_2:-65569388 | None:intergenic |
| AATTATTGGTGGAGAAGAAA+AGG | 0.486241 | 4_2:+65570392 | Msa0615950:CDS |
| TTATTGTTGTTTACCTTGGT+GGG | 0.486440 | 4_2:-65570040 | None:intergenic |
| TGGAGAAGAAAAGGCATGGA+AGG | 0.486907 | 4_2:+65570401 | Msa0615950:CDS |
| CAAACTGTTTCAGAGGAAGA+AGG | 0.489618 | 4_2:+65570582 | Msa0615950:CDS |
| AGTTGGGTTTGTCATGCAAA+TGG | 0.490408 | 4_2:-65569633 | None:intergenic |
| TTTATTGTTGTTTACCTTGG+TGG | 0.495717 | 4_2:-65570041 | None:intergenic |
| GCTTCTGTTGGCAAAGGAAG+AGG | 0.497466 | 4_2:+65569926 | Msa0615950:CDS |
| TGGTGGAGGTGATGAGATGG+AGG | 0.498303 | 4_2:+65569862 | Msa0615950:CDS |
| CTTCCATCTGGATCACCAAA+AGG | 0.498543 | 4_2:-65570481 | None:intergenic |
| GGGAGTGCTGGAATTCAATA+GGG | 0.499086 | 4_2:+65569898 | Msa0615950:CDS |
| GGAAGGTTCAAAGGATATAG+AGG | 0.514568 | 4_2:-65569752 | None:intergenic |
| TTGAGAAGGTTAAGGACATC+CGG | 0.515412 | 4_2:-65569569 | None:intergenic |
| AGACAAATAGCAATGAGTTC+AGG | 0.516206 | 4_2:+65569077 | None:intergenic |
| CTGAGAGCTGGAGGCTGTGG+AGG | 0.518825 | 4_2:-65569773 | None:intergenic |
| TGTTTACCTTGGTGGGACTT+GGG | 0.518905 | 4_2:-65570033 | None:intergenic |
| AGTGTATCAGAACTCGAGTT+GGG | 0.519237 | 4_2:+65569403 | Msa0615950:CDS |
| AGCATCTAGGTAAGTTGAGA+AGG | 0.519406 | 4_2:-65569583 | None:intergenic |
| GACTACAGCCTACTTATATG+TGG | 0.520235 | 4_2:-65570898 | None:intergenic |
| TCCACAGCCTCCAGCTCTCA+GGG | 0.522645 | 4_2:+65569775 | Msa0615950:CDS |
| AGACCCTCATTACCCTTCAC+CGG | 0.523695 | 4_2:+65569550 | Msa0615950:CDS |
| TAGTTTCTTGTTCAATAGCA+AGG | 0.524699 | 4_2:+65570693 | Msa0615950:CDS |
| TGATGAGATGGAGGGAGATG+GGG | 0.524823 | 4_2:+65569871 | Msa0615950:CDS |
| GAGCTGGAGGCTGTGGAGGA+AGG | 0.524927 | 4_2:-65569769 | None:intergenic |
| AATAGGGTCACTGCTTCTGT+TGG | 0.528001 | 4_2:+65569914 | Msa0615950:CDS |
| TGAAACAATTCCCTGAGAGC+TGG | 0.529234 | 4_2:-65569785 | None:intergenic |
| GAATTTCAAGCCTTCTGTAG+AGG | 0.532912 | 4_2:+65569220 | Msa0615950:CDS |
| CTGAAGTTCATCCAAAACCT+TGG | 0.538751 | 4_2:-65570626 | None:intergenic |
| ATTGTTGTTCAGATAGTTGG+TGG | 0.547721 | 4_2:-65569469 | None:intergenic |
| GGCTGTGGAGGAAGGTTCAA+AGG | 0.549237 | 4_2:-65569761 | None:intergenic |
| TAGGTAAGTTGAGAAGGTTA+AGG | 0.550958 | 4_2:-65569577 | None:intergenic |
| ATGAGGGTCTAGAATGGTCG+AGG | 0.552417 | 4_2:-65569537 | None:intergenic |
| CAGGTCTTCCACATATAAGT+AGG | 0.553461 | 4_2:+65570890 | Msa0615950:CDS |
| ACATCCGGTGAAGGGTAATG+AGG | 0.553656 | 4_2:-65569554 | None:intergenic |
| GATCCCAACACAATGGATGA+AGG | 0.553830 | 4_2:+65569143 | Msa0615950:CDS |
| GAACCATTTCTCGAGTTGGT+TGG | 0.554382 | 4_2:-65569833 | None:intergenic |
| TTTGTCATGCAAATGGTGGA+TGG | 0.555450 | 4_2:-65569626 | None:intergenic |
| TGGAAAGTACAAAATCTTGA+GGG | 0.560743 | 4_2:+65570003 | Msa0615950:CDS |
| GGAGAAGAAAAGGCATGGAA+GGG | 0.561748 | 4_2:+65570402 | Msa0615950:CDS |
| AGGTTAAGGACATCCGGTGA+AGG | 0.563045 | 4_2:-65569563 | None:intergenic |
| TAATCCATATCCTGAACACT+AGG | 0.565325 | 4_2:-65569428 | None:intergenic |
| AAGACAGTGAGGTTGATGTC+CGG | 0.567804 | 4_2:+65570536 | Msa0615950:CDS |
| ATGGAAAGTACAAAATCTTG+AGG | 0.570741 | 4_2:+65570002 | Msa0615950:CDS |
| CATGTTGCAGGTGGACATGT+TGG | 0.572375 | 4_2:+65570661 | Msa0615950:CDS |
| TTACAATCAAACTGTTTCAG+AGG | 0.573969 | 4_2:+65570575 | Msa0615950:CDS |
| ATTGAATTATGAAAATTGGG+TGG | 0.575295 | 4_2:-65569662 | None:intergenic |
| AGCAAAGATGAAGAGCATCT+AGG | 0.580041 | 4_2:-65569596 | None:intergenic |
| GTCACTGCTTCTGTTGGCAA+AGG | 0.580434 | 4_2:+65569920 | Msa0615950:CDS |
| ACTGATAGAGCATCAGTGGT+TGG | 0.582304 | 4_2:+65570319 | Msa0615950:CDS |
| AACAATTCCCTGAGAGCTGG+AGG | 0.583698 | 4_2:-65569782 | None:intergenic |
| TTGGTGGAGAAGAAAAGGCA+TGG | 0.589624 | 4_2:+65570397 | Msa0615950:CDS |
| ATGGACACACAATATGCAGC+AGG | 0.590966 | 4_2:+65570871 | Msa0615950:CDS |
| AGGGTAATGAGGGTCTAGAA+TGG | 0.594794 | 4_2:-65569543 | None:intergenic |
| GAATGAACTGAAATTATTGG+TGG | 0.601922 | 4_2:+65570381 | Msa0615950:CDS |
| AAGTGTATCAGAACTCGAGT+TGG | 0.603471 | 4_2:+65569402 | Msa0615950:CDS |
| TTGTTCAATGTCTACTGATG+AGG | 0.603690 | 4_2:-65569315 | None:intergenic |
| GGATTTCCTCTGCAGCCATG+AGG | 0.604351 | 4_2:-65570512 | None:intergenic |
| TATAAGTGGAAACATCATCA+AGG | 0.606570 | 4_2:-65569277 | None:intergenic |
| GGTTAAGGACATCCGGTGAA+GGG | 0.607008 | 4_2:-65569562 | None:intergenic |
| TAAGAACCTCATGGCTGCAG+AGG | 0.607611 | 4_2:+65570506 | Msa0615950:CDS |
| GAACTTCATCATGTTGCAGG+TGG | 0.610349 | 4_2:+65570652 | Msa0615950:CDS |
| CATAACATCAATCACCCTGT+TGG | 0.611438 | 4_2:-65570851 | None:intergenic |
| CATCCGGTGAAGGGTAATGA+GGG | 0.612093 | 4_2:-65569553 | None:intergenic |
| AGACAACACAAGCGGATCAT+CGG | 0.616516 | 4_2:+65569718 | Msa0615950:CDS |
| TGGGTTTGTCATGCAAATGG+TGG | 0.620066 | 4_2:-65569630 | None:intergenic |
| GCAGACTGATAGAGCATCAG+TGG | 0.620695 | 4_2:+65570315 | Msa0615950:intron |
| TGTTCAATGTCTACTGATGA+GGG | 0.621545 | 4_2:-65569314 | None:intergenic |
| AAGGCTTGAAATTCTCGTCA+AGG | 0.622448 | 4_2:-65569211 | None:intergenic |
| TAAGGTAGTTCCTCTACAGA+AGG | 0.625311 | 4_2:-65569230 | None:intergenic |
| TGTCTGATGATCCTATTGGA+AGG | 0.634988 | 4_2:-65569700 | None:intergenic |
| GGTGGAGGTGATGAGATGGA+GGG | 0.640062 | 4_2:+65569863 | Msa0615950:CDS |
| TGCAAGTGCTATAGCCAACA+GGG | 0.647996 | 4_2:+65570837 | Msa0615950:CDS |
| TCTGTTGGCAAAGGAAGAGG+AGG | 0.650064 | 4_2:+65569929 | Msa0615950:CDS |
| TCACTGATGCAGGTAAATGA+AGG | 0.652033 | 4_2:+65570802 | Msa0615950:intron |
| ATGGAAGTATAAGAACCTCA+TGG | 0.653640 | 4_2:+65570497 | Msa0615950:CDS |
| AATCCATATCCTGAACACTA+GGG | 0.654503 | 4_2:-65569427 | None:intergenic |
| ACAATATCAACAATTTATCG+AGG | 0.665388 | 4_2:+65569487 | Msa0615950:CDS |
| TTGTTTCAATCTCTACCTCG+AGG | 0.671336 | 4_2:+65569800 | Msa0615950:CDS |
| GGATCATCAGACAACACAAG+CGG | 0.678009 | 4_2:+65569710 | Msa0615950:CDS |
| AGGGAATACCTACAACAACA+TGG | 0.679432 | 4_2:+65569361 | Msa0615950:CDS |
| TTGCTTTGATCCCAACACAA+TGG | 0.687353 | 4_2:+65569136 | Msa0615950:CDS |
| TCTCATCCCAAGTCCCACCA+AGG | 0.687512 | 4_2:+65570027 | Msa0615950:CDS |
| TGAGGGTCTAGAATGGTCGA+GGG | 0.709529 | 4_2:-65569536 | None:intergenic |
| GAGGAAATCCAAAGACAGTG+AGG | 0.714492 | 4_2:+65570525 | Msa0615950:CDS |
| GTTGGCATGCTATAGCCTCG+AGG | 0.732010 | 4_2:-65569815 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAAAATTACATTTTTAG+TGG | + | chr4_2:65570222-65570241 | Msa0615950:intron | 10.0% |
| !!! | AATAAAAATTACATTTTTAG+TGG | + | chr4_2:65570222-65570241 | Msa0615950:intron | 10.0% |
| !! | TAGAATTATTACATTTGATT+TGG | + | chr4_2:65570755-65570774 | Msa0615950:intron | 15.0% |
| !! | TGGTTATATATTAAACTATA+AGG | + | chr4_2:65570775-65570794 | Msa0615950:intron | 15.0% |
| !! | TAGAATTATTACATTTGATT+TGG | + | chr4_2:65570755-65570774 | Msa0615950:intron | 15.0% |
| !! | TGGTTATATATTAAACTATA+AGG | + | chr4_2:65570775-65570794 | Msa0615950:intron | 15.0% |
| !! | GTCATTGAATTATGAAAATT+GGG | - | chr4_2:65569668-65569687 | None:intergenic | 20.0% |
| !! | AGTCATTGAATTATGAAAAT+TGG | - | chr4_2:65569669-65569688 | None:intergenic | 20.0% |
| !! | TTCATGGATAAAATTATACA+TGG | - | chr4_2:65570087-65570106 | None:intergenic | 20.0% |
| !! | GATTCAAAACATATATCAAT+TGG | - | chr4_2:65570136-65570155 | None:intergenic | 20.0% |
| !! | TTGAATCTTGAATTATATTG+AGG | + | chr4_2:65570149-65570168 | Msa0615950:intron | 20.0% |
| !! | GTCATTGAATTATGAAAATT+GGG | - | chr4_2:65569668-65569687 | None:intergenic | 20.0% |
| !! | AGTCATTGAATTATGAAAAT+TGG | - | chr4_2:65569669-65569688 | None:intergenic | 20.0% |
| !! | TTCATGGATAAAATTATACA+TGG | - | chr4_2:65570087-65570106 | None:intergenic | 20.0% |
| !! | GATTCAAAACATATATCAAT+TGG | - | chr4_2:65570136-65570155 | None:intergenic | 20.0% |
| !! | TTGAATCTTGAATTATATTG+AGG | + | chr4_2:65570149-65570168 | Msa0615950:intron | 20.0% |
| !! | TTGTTTGTGTTGTTATCATT+GGG | - | chr4_2:65569182-65569201 | None:intergenic | 25.0% |
| ! | ATTGAACAACAACAAAATCT+TGG | + | chr4_2:65569329-65569348 | Msa0615950:CDS | 25.0% |
| !! | AAAATCTTGGTTTGAACATA+GGG | + | chr4_2:65569342-65569361 | Msa0615950:CDS | 25.0% |
| ! | ACAATATCAACAATTTATCG+AGG | + | chr4_2:65569487-65569506 | Msa0615950:CDS | 25.0% |
| ! | ATTGAATTATGAAAATTGGG+TGG | - | chr4_2:65569665-65569684 | None:intergenic | 25.0% |
| !! | CATAATTCAATGACTTTTCT+TGG | + | chr4_2:65569674-65569693 | Msa0615950:CDS | 25.0% |
| !!! | ATGTTTATTGTTGTTTACCT+TGG | - | chr4_2:65570047-65570066 | None:intergenic | 25.0% |
| ! | CTATTTGATACCATGATTAA+CGG | + | chr4_2:65570276-65570295 | Msa0615950:intron | 25.0% |
| ! | TATTTGATACCATGATTAAC+GGG | + | chr4_2:65570277-65570296 | Msa0615950:intron | 25.0% |
| ! | AGTGAATGAACTGAAATTAT+TGG | + | chr4_2:65570378-65570397 | Msa0615950:CDS | 25.0% |
| !! | TTGTTTGTGTTGTTATCATT+GGG | - | chr4_2:65569182-65569201 | None:intergenic | 25.0% |
| ! | ATTGAACAACAACAAAATCT+TGG | + | chr4_2:65569329-65569348 | Msa0615950:CDS | 25.0% |
| !! | AAAATCTTGGTTTGAACATA+GGG | + | chr4_2:65569342-65569361 | Msa0615950:CDS | 25.0% |
| ! | ACAATATCAACAATTTATCG+AGG | + | chr4_2:65569487-65569506 | Msa0615950:CDS | 25.0% |
| ! | ATTGAATTATGAAAATTGGG+TGG | - | chr4_2:65569665-65569684 | None:intergenic | 25.0% |
| !! | CATAATTCAATGACTTTTCT+TGG | + | chr4_2:65569674-65569693 | Msa0615950:CDS | 25.0% |
| !!! | ATGTTTATTGTTGTTTACCT+TGG | - | chr4_2:65570047-65570066 | None:intergenic | 25.0% |
| ! | CTATTTGATACCATGATTAA+CGG | + | chr4_2:65570276-65570295 | Msa0615950:intron | 25.0% |
| ! | TATTTGATACCATGATTAAC+GGG | + | chr4_2:65570277-65570296 | Msa0615950:intron | 25.0% |
| ! | AGTGAATGAACTGAAATTAT+TGG | + | chr4_2:65570378-65570397 | Msa0615950:CDS | 25.0% |
| CAAAACATGCATGAACAAAA+TGG | + | chr4_2:65569113-65569132 | Msa0615950:CDS | 30.0% | |
| ! | GTTGTTTGTGTTGTTATCAT+TGG | - | chr4_2:65569183-65569202 | None:intergenic | 30.0% |
| !! | GAATTTTGATGATTGTGGTA+AGG | - | chr4_2:65569251-65569270 | None:intergenic | 30.0% |
| !! | GTTGTGAATTTTGATGATTG+TGG | - | chr4_2:65569256-65569275 | None:intergenic | 30.0% |
| TATAAGTGGAAACATCATCA+AGG | - | chr4_2:65569280-65569299 | None:intergenic | 30.0% | |
| GATGTTTCCACTTATACAAA+TGG | + | chr4_2:65569284-65569303 | Msa0615950:CDS | 30.0% | |
| AGTGAATCCATTTGTATAAG+TGG | - | chr4_2:65569294-65569313 | None:intergenic | 30.0% | |
| ! | CAAAATCTTGGTTTGAACAT+AGG | + | chr4_2:65569341-65569360 | Msa0615950:CDS | 30.0% |
| ! | GATATTGTTGTTCAGATAGT+TGG | - | chr4_2:65569475-65569494 | None:intergenic | 30.0% |
| TTTCTCAGTTGCAAAATGTT+TGG | - | chr4_2:65569963-65569982 | None:intergenic | 30.0% | |
| ! | ATGGAAAGTACAAAATCTTG+AGG | + | chr4_2:65570002-65570021 | Msa0615950:CDS | 30.0% |
| ! | TGGAAAGTACAAAATCTTGA+GGG | + | chr4_2:65570003-65570022 | Msa0615950:CDS | 30.0% |
| !! | TTATTGTTGTTTACCTTGGT+GGG | - | chr4_2:65570043-65570062 | None:intergenic | 30.0% |
| !! | TTTATTGTTGTTTACCTTGG+TGG | - | chr4_2:65570044-65570063 | None:intergenic | 30.0% |
| TCAAATAGAGATTCAAATCG+TGG | - | chr4_2:65570264-65570283 | None:intergenic | 30.0% | |
| GAATGAACTGAAATTATTGG+TGG | + | chr4_2:65570381-65570400 | Msa0615950:CDS | 30.0% | |
| AATTATTGGTGGAGAAGAAA+AGG | + | chr4_2:65570392-65570411 | Msa0615950:CDS | 30.0% | |
| TAACATCATCATCGATAATC+CGG | - | chr4_2:65570558-65570577 | None:intergenic | 30.0% | |
| TTACAATCAAACTGTTTCAG+AGG | + | chr4_2:65570575-65570594 | Msa0615950:CDS | 30.0% | |
| TAGTTTCTTGTTCAATAGCA+AGG | + | chr4_2:65570693-65570712 | Msa0615950:CDS | 30.0% | |
| CAAAACATGCATGAACAAAA+TGG | + | chr4_2:65569113-65569132 | Msa0615950:CDS | 30.0% | |
| ! | GTTGTTTGTGTTGTTATCAT+TGG | - | chr4_2:65569183-65569202 | None:intergenic | 30.0% |
| !! | GAATTTTGATGATTGTGGTA+AGG | - | chr4_2:65569251-65569270 | None:intergenic | 30.0% |
| !! | GTTGTGAATTTTGATGATTG+TGG | - | chr4_2:65569256-65569275 | None:intergenic | 30.0% |
| TATAAGTGGAAACATCATCA+AGG | - | chr4_2:65569280-65569299 | None:intergenic | 30.0% | |
| GATGTTTCCACTTATACAAA+TGG | + | chr4_2:65569284-65569303 | Msa0615950:CDS | 30.0% | |
| AGTGAATCCATTTGTATAAG+TGG | - | chr4_2:65569294-65569313 | None:intergenic | 30.0% | |
| ! | CAAAATCTTGGTTTGAACAT+AGG | + | chr4_2:65569341-65569360 | Msa0615950:CDS | 30.0% |
| ! | GATATTGTTGTTCAGATAGT+TGG | - | chr4_2:65569475-65569494 | None:intergenic | 30.0% |
| TTTCTCAGTTGCAAAATGTT+TGG | - | chr4_2:65569963-65569982 | None:intergenic | 30.0% | |
| ! | ATGGAAAGTACAAAATCTTG+AGG | + | chr4_2:65570002-65570021 | Msa0615950:CDS | 30.0% |
| ! | TGGAAAGTACAAAATCTTGA+GGG | + | chr4_2:65570003-65570022 | Msa0615950:CDS | 30.0% |
| !! | TTATTGTTGTTTACCTTGGT+GGG | - | chr4_2:65570043-65570062 | None:intergenic | 30.0% |
| !! | TTTATTGTTGTTTACCTTGG+TGG | - | chr4_2:65570044-65570063 | None:intergenic | 30.0% |
| TCAAATAGAGATTCAAATCG+TGG | - | chr4_2:65570264-65570283 | None:intergenic | 30.0% | |
| GAATGAACTGAAATTATTGG+TGG | + | chr4_2:65570381-65570400 | Msa0615950:CDS | 30.0% | |
| AATTATTGGTGGAGAAGAAA+AGG | + | chr4_2:65570392-65570411 | Msa0615950:CDS | 30.0% | |
| TAACATCATCATCGATAATC+CGG | - | chr4_2:65570558-65570577 | None:intergenic | 30.0% | |
| TTACAATCAAACTGTTTCAG+AGG | + | chr4_2:65570575-65570594 | Msa0615950:CDS | 30.0% | |
| TAGTTTCTTGTTCAATAGCA+AGG | + | chr4_2:65570693-65570712 | Msa0615950:CDS | 30.0% | |
| TGTTCAATGTCTACTGATGA+GGG | - | chr4_2:65569317-65569336 | None:intergenic | 35.0% | |
| TTGTTCAATGTCTACTGATG+AGG | - | chr4_2:65569318-65569337 | None:intergenic | 35.0% | |
| ATGGTTATCCATGTTGTTGT+AGG | - | chr4_2:65569372-65569391 | None:intergenic | 35.0% | |
| CAACAACATGGATAACCATT+TGG | + | chr4_2:65569373-65569392 | Msa0615950:CDS | 35.0% | |
| GATACACTTCTTGTACCAAA+TGG | - | chr4_2:65569391-65569410 | None:intergenic | 35.0% | |
| AATCCATATCCTGAACACTA+GGG | - | chr4_2:65569430-65569449 | None:intergenic | 35.0% | |
| TAATCCATATCCTGAACACT+AGG | - | chr4_2:65569431-65569450 | None:intergenic | 35.0% | |
| ! | ATTGTTGTTCAGATAGTTGG+TGG | - | chr4_2:65569472-65569491 | None:intergenic | 35.0% |
| ! | TAGGTAAGTTGAGAAGGTTA+AGG | - | chr4_2:65569580-65569599 | None:intergenic | 35.0% |
| !!! | AATTGGGTGGATTTTGAGTT+GGG | - | chr4_2:65569652-65569671 | None:intergenic | 35.0% |
| !! | AAATTGGGTGGATTTTGAGT+TGG | - | chr4_2:65569653-65569672 | None:intergenic | 35.0% |
| ! | TCGAGAAATGGTTCTCTTTT+TGG | + | chr4_2:65569842-65569861 | Msa0615950:CDS | 35.0% |
| ! | AGAAATGGTTCTCTTTTTGG+TGG | + | chr4_2:65569845-65569864 | Msa0615950:CDS | 35.0% |
| CAAAGAAGAGAGCAATTGAA+TGG | + | chr4_2:65569983-65570002 | Msa0615950:CDS | 35.0% | |
| ATCAATTGGCAACAGAAAAG+TGG | - | chr4_2:65570122-65570141 | None:intergenic | 35.0% | |
| TAGAGATTCAAATCGTGGAA+CGG | - | chr4_2:65570259-65570278 | None:intergenic | 35.0% | |
| ! | AGCTGTAACATAAAGCCTTT+TGG | + | chr4_2:65570466-65570485 | Msa0615950:CDS | 35.0% |
| ! | ATGGAAGTATAAGAACCTCA+TGG | + | chr4_2:65570497-65570516 | Msa0615950:CDS | 35.0% |
| TTCTTGTTCAATAGCAAGGT+TGG | + | chr4_2:65570697-65570716 | Msa0615950:intron | 35.0% | |
| TGTTCAATGTCTACTGATGA+GGG | - | chr4_2:65569317-65569336 | None:intergenic | 35.0% | |
| TTGTTCAATGTCTACTGATG+AGG | - | chr4_2:65569318-65569337 | None:intergenic | 35.0% | |
| ATGGTTATCCATGTTGTTGT+AGG | - | chr4_2:65569372-65569391 | None:intergenic | 35.0% | |
| CAACAACATGGATAACCATT+TGG | + | chr4_2:65569373-65569392 | Msa0615950:CDS | 35.0% | |
| GATACACTTCTTGTACCAAA+TGG | - | chr4_2:65569391-65569410 | None:intergenic | 35.0% | |
| AATCCATATCCTGAACACTA+GGG | - | chr4_2:65569430-65569449 | None:intergenic | 35.0% | |
| TAATCCATATCCTGAACACT+AGG | - | chr4_2:65569431-65569450 | None:intergenic | 35.0% | |
| ! | ATTGTTGTTCAGATAGTTGG+TGG | - | chr4_2:65569472-65569491 | None:intergenic | 35.0% |
| ! | TAGGTAAGTTGAGAAGGTTA+AGG | - | chr4_2:65569580-65569599 | None:intergenic | 35.0% |
| !!! | AATTGGGTGGATTTTGAGTT+GGG | - | chr4_2:65569652-65569671 | None:intergenic | 35.0% |
| !! | AAATTGGGTGGATTTTGAGT+TGG | - | chr4_2:65569653-65569672 | None:intergenic | 35.0% |
| ! | TCGAGAAATGGTTCTCTTTT+TGG | + | chr4_2:65569842-65569861 | Msa0615950:CDS | 35.0% |
| ! | AGAAATGGTTCTCTTTTTGG+TGG | + | chr4_2:65569845-65569864 | Msa0615950:CDS | 35.0% |
| CAAAGAAGAGAGCAATTGAA+TGG | + | chr4_2:65569983-65570002 | Msa0615950:CDS | 35.0% | |
| ATCAATTGGCAACAGAAAAG+TGG | - | chr4_2:65570122-65570141 | None:intergenic | 35.0% | |
| TAGAGATTCAAATCGTGGAA+CGG | - | chr4_2:65570259-65570278 | None:intergenic | 35.0% | |
| ! | AGCTGTAACATAAAGCCTTT+TGG | + | chr4_2:65570466-65570485 | Msa0615950:CDS | 35.0% |
| ! | ATGGAAGTATAAGAACCTCA+TGG | + | chr4_2:65570497-65570516 | Msa0615950:CDS | 35.0% |
| TTCTTGTTCAATAGCAAGGT+TGG | + | chr4_2:65570697-65570716 | Msa0615950:intron | 35.0% | |
| TTGCTTTGATCCCAACACAA+TGG | + | chr4_2:65569136-65569155 | Msa0615950:CDS | 40.0% | |
| ACACCTTCATCCATTGTGTT+GGG | - | chr4_2:65569149-65569168 | None:intergenic | 40.0% | |
| AACACCTTCATCCATTGTGT+TGG | - | chr4_2:65569150-65569169 | None:intergenic | 40.0% | |
| AAGGCTTGAAATTCTCGTCA+AGG | - | chr4_2:65569214-65569233 | None:intergenic | 40.0% | |
| GAATTTCAAGCCTTCTGTAG+AGG | + | chr4_2:65569220-65569239 | Msa0615950:CDS | 40.0% | |
| TAAGGTAGTTCCTCTACAGA+AGG | - | chr4_2:65569233-65569252 | None:intergenic | 40.0% | |
| AGGGAATACCTACAACAACA+TGG | + | chr4_2:65569361-65569380 | Msa0615950:CDS | 40.0% | |
| AAGTGTATCAGAACTCGAGT+TGG | + | chr4_2:65569402-65569421 | Msa0615950:CDS | 40.0% | |
| AGTGTATCAGAACTCGAGTT+GGG | + | chr4_2:65569403-65569422 | Msa0615950:CDS | 40.0% | |
| !! | AGGGATTGTAGCTTTGGTTA+TGG | - | chr4_2:65569520-65569539 | None:intergenic | 40.0% |
| TTGAGAAGGTTAAGGACATC+CGG | - | chr4_2:65569572-65569591 | None:intergenic | 40.0% | |
| ! | AGCATCTAGGTAAGTTGAGA+AGG | - | chr4_2:65569586-65569605 | None:intergenic | 40.0% |
| !! | AGCAAAGATGAAGAGCATCT+AGG | - | chr4_2:65569599-65569618 | None:intergenic | 40.0% |
| ! | TTTGTCATGCAAATGGTGGA+TGG | - | chr4_2:65569629-65569648 | None:intergenic | 40.0% |
| AGTTGGGTTTGTCATGCAAA+TGG | - | chr4_2:65569636-65569655 | None:intergenic | 40.0% | |
| TTTCTTGGAGACCTTCCAAT+AGG | + | chr4_2:65569689-65569708 | Msa0615950:CDS | 40.0% | |
| TGTCTGATGATCCTATTGGA+AGG | - | chr4_2:65569703-65569722 | None:intergenic | 40.0% | |
| GTGTTGTCTGATGATCCTAT+TGG | - | chr4_2:65569707-65569726 | None:intergenic | 40.0% | |
| GGAAGGTTCAAAGGATATAG+AGG | - | chr4_2:65569755-65569774 | None:intergenic | 40.0% | |
| TTGTTTCAATCTCTACCTCG+AGG | + | chr4_2:65569800-65569819 | Msa0615950:CDS | 40.0% | |
| AAGAGAACCATTTCTCGAGT+TGG | - | chr4_2:65569840-65569859 | None:intergenic | 40.0% | |
| !! | AATGGTTCTCTTTTTGGTGG+AGG | + | chr4_2:65569848-65569867 | Msa0615950:CDS | 40.0% |
| GAGGTTCTTATACTTCCATC+TGG | - | chr4_2:65570496-65570515 | None:intergenic | 40.0% | |
| CAAACTGTTTCAGAGGAAGA+AGG | + | chr4_2:65570582-65570601 | Msa0615950:CDS | 40.0% | |
| CTGAAGTTCATCCAAAACCT+TGG | - | chr4_2:65570629-65570648 | None:intergenic | 40.0% | |
| !!! | GGTTTTGGATGAACTTCAGT+TGG | + | chr4_2:65570630-65570649 | Msa0615950:CDS | 40.0% |
| TTGGAACTTCATCATGTTGC+AGG | + | chr4_2:65570649-65570668 | Msa0615950:CDS | 40.0% | |
| TCACTGATGCAGGTAAATGA+AGG | + | chr4_2:65570802-65570821 | Msa0615950:intron | 40.0% | |
| CATAACATCAATCACCCTGT+TGG | - | chr4_2:65570854-65570873 | None:intergenic | 40.0% | |
| CAACAGGGTGATTGATGTTA+TGG | + | chr4_2:65570852-65570871 | Msa0615950:CDS | 40.0% | |
| CAGGTCTTCCACATATAAGT+AGG | + | chr4_2:65570890-65570909 | Msa0615950:CDS | 40.0% | |
| TTGCTTTGATCCCAACACAA+TGG | + | chr4_2:65569136-65569155 | Msa0615950:CDS | 40.0% | |
| ACACCTTCATCCATTGTGTT+GGG | - | chr4_2:65569149-65569168 | None:intergenic | 40.0% | |
| AACACCTTCATCCATTGTGT+TGG | - | chr4_2:65569150-65569169 | None:intergenic | 40.0% | |
| AAGGCTTGAAATTCTCGTCA+AGG | - | chr4_2:65569214-65569233 | None:intergenic | 40.0% | |
| GAATTTCAAGCCTTCTGTAG+AGG | + | chr4_2:65569220-65569239 | Msa0615950:CDS | 40.0% | |
| TAAGGTAGTTCCTCTACAGA+AGG | - | chr4_2:65569233-65569252 | None:intergenic | 40.0% | |
| AGGGAATACCTACAACAACA+TGG | + | chr4_2:65569361-65569380 | Msa0615950:CDS | 40.0% | |
| AAGTGTATCAGAACTCGAGT+TGG | + | chr4_2:65569402-65569421 | Msa0615950:CDS | 40.0% | |
| AGTGTATCAGAACTCGAGTT+GGG | + | chr4_2:65569403-65569422 | Msa0615950:CDS | 40.0% | |
| !! | AGGGATTGTAGCTTTGGTTA+TGG | - | chr4_2:65569520-65569539 | None:intergenic | 40.0% |
| TTGAGAAGGTTAAGGACATC+CGG | - | chr4_2:65569572-65569591 | None:intergenic | 40.0% | |
| ! | AGCATCTAGGTAAGTTGAGA+AGG | - | chr4_2:65569586-65569605 | None:intergenic | 40.0% |
| !! | AGCAAAGATGAAGAGCATCT+AGG | - | chr4_2:65569599-65569618 | None:intergenic | 40.0% |
| ! | TTTGTCATGCAAATGGTGGA+TGG | - | chr4_2:65569629-65569648 | None:intergenic | 40.0% |
| AGTTGGGTTTGTCATGCAAA+TGG | - | chr4_2:65569636-65569655 | None:intergenic | 40.0% | |
| TTTCTTGGAGACCTTCCAAT+AGG | + | chr4_2:65569689-65569708 | Msa0615950:CDS | 40.0% | |
| TGTCTGATGATCCTATTGGA+AGG | - | chr4_2:65569703-65569722 | None:intergenic | 40.0% | |
| GTGTTGTCTGATGATCCTAT+TGG | - | chr4_2:65569707-65569726 | None:intergenic | 40.0% | |
| GGAAGGTTCAAAGGATATAG+AGG | - | chr4_2:65569755-65569774 | None:intergenic | 40.0% | |
| TTGTTTCAATCTCTACCTCG+AGG | + | chr4_2:65569800-65569819 | Msa0615950:CDS | 40.0% | |
| AAGAGAACCATTTCTCGAGT+TGG | - | chr4_2:65569840-65569859 | None:intergenic | 40.0% | |
| !! | AATGGTTCTCTTTTTGGTGG+AGG | + | chr4_2:65569848-65569867 | Msa0615950:CDS | 40.0% |
| GAGGTTCTTATACTTCCATC+TGG | - | chr4_2:65570496-65570515 | None:intergenic | 40.0% | |
| CAAACTGTTTCAGAGGAAGA+AGG | + | chr4_2:65570582-65570601 | Msa0615950:CDS | 40.0% | |
| CTGAAGTTCATCCAAAACCT+TGG | - | chr4_2:65570629-65570648 | None:intergenic | 40.0% | |
| !!! | GGTTTTGGATGAACTTCAGT+TGG | + | chr4_2:65570630-65570649 | Msa0615950:CDS | 40.0% |
| TTGGAACTTCATCATGTTGC+AGG | + | chr4_2:65570649-65570668 | Msa0615950:CDS | 40.0% | |
| TCACTGATGCAGGTAAATGA+AGG | + | chr4_2:65570802-65570821 | Msa0615950:intron | 40.0% | |
| CATAACATCAATCACCCTGT+TGG | - | chr4_2:65570854-65570873 | None:intergenic | 40.0% | |
| CAACAGGGTGATTGATGTTA+TGG | + | chr4_2:65570852-65570871 | Msa0615950:CDS | 40.0% | |
| CAGGTCTTCCACATATAAGT+AGG | + | chr4_2:65570890-65570909 | Msa0615950:CDS | 40.0% | |
| GATCCCAACACAATGGATGA+AGG | + | chr4_2:65569143-65569162 | Msa0615950:CDS | 45.0% | |
| !! | CAGATAGTTGGTGGTGTTCT+TGG | - | chr4_2:65569463-65569482 | None:intergenic | 45.0% |
| AGGGTAATGAGGGTCTAGAA+TGG | - | chr4_2:65569546-65569565 | None:intergenic | 45.0% | |
| TGGGTTTGTCATGCAAATGG+TGG | - | chr4_2:65569633-65569652 | None:intergenic | 45.0% | |
| GGATCATCAGACAACACAAG+CGG | + | chr4_2:65569710-65569729 | Msa0615950:CDS | 45.0% | |
| AGACAACACAAGCGGATCAT+CGG | + | chr4_2:65569718-65569737 | Msa0615950:CDS | 45.0% | |
| TGAAACAATTCCCTGAGAGC+TGG | - | chr4_2:65569788-65569807 | None:intergenic | 45.0% | |
| ATGCCAACCAACTCGAGAAA+TGG | + | chr4_2:65569830-65569849 | Msa0615950:CDS | 45.0% | |
| !! | GAACCATTTCTCGAGTTGGT+TGG | - | chr4_2:65569836-65569855 | None:intergenic | 45.0% |
| ! | TTTTGGTGGAGGTGATGAGA+TGG | + | chr4_2:65569859-65569878 | Msa0615950:CDS | 45.0% |
| !! | TGGGAGTGCTGGAATTCAAT+AGG | + | chr4_2:65569897-65569916 | Msa0615950:CDS | 45.0% |
| !! | GGGAGTGCTGGAATTCAATA+GGG | + | chr4_2:65569898-65569917 | Msa0615950:CDS | 45.0% |
| AATAGGGTCACTGCTTCTGT+TGG | + | chr4_2:65569914-65569933 | Msa0615950:CDS | 45.0% | |
| TGTTTACCTTGGTGGGACTT+GGG | - | chr4_2:65570036-65570055 | None:intergenic | 45.0% | |
| TTGTTTACCTTGGTGGGACT+TGG | - | chr4_2:65570037-65570056 | None:intergenic | 45.0% | |
| ATTGGCAACAGAAAAGTGGC+TGG | - | chr4_2:65570118-65570137 | None:intergenic | 45.0% | |
| CCAAAACTGCCCGTTAATCA+TGG | - | chr4_2:65570289-65570308 | None:intergenic | 45.0% | |
| !! | CCATGATTAACGGGCAGTTT+TGG | + | chr4_2:65570286-65570305 | Msa0615950:intron | 45.0% |
| ! | ACTGATAGAGCATCAGTGGT+TGG | + | chr4_2:65570319-65570338 | Msa0615950:CDS | 45.0% |
| TTGGTGGAGAAGAAAAGGCA+TGG | + | chr4_2:65570397-65570416 | Msa0615950:CDS | 45.0% | |
| ! | TGGAGAAGAAAAGGCATGGA+AGG | + | chr4_2:65570401-65570420 | Msa0615950:CDS | 45.0% |
| ! | GGAGAAGAAAAGGCATGGAA+GGG | + | chr4_2:65570402-65570421 | Msa0615950:CDS | 45.0% |
| !! | AAGCCTTTTGGTGATCCAGA+TGG | + | chr4_2:65570478-65570497 | Msa0615950:CDS | 45.0% |
| CTTCCATCTGGATCACCAAA+AGG | - | chr4_2:65570484-65570503 | None:intergenic | 45.0% | |
| GAGGAAATCCAAAGACAGTG+AGG | + | chr4_2:65570525-65570544 | Msa0615950:CDS | 45.0% | |
| GACATCAACCTCACTGTCTT+TGG | - | chr4_2:65570536-65570555 | None:intergenic | 45.0% | |
| !! | AAGACAGTGAGGTTGATGTC+CGG | + | chr4_2:65570536-65570555 | Msa0615950:CDS | 45.0% |
| !! | TTGCTTGCTGTTTGTGTCCA+AGG | + | chr4_2:65570609-65570628 | Msa0615950:CDS | 45.0% |
| ! | GCTGTTTGTGTCCAAGGTTT+TGG | + | chr4_2:65570615-65570634 | Msa0615950:CDS | 45.0% |
| GAACTTCATCATGTTGCAGG+TGG | + | chr4_2:65570652-65570671 | Msa0615950:CDS | 45.0% | |
| ! | ATAAGGTGTGTCACTGATGC+AGG | + | chr4_2:65570792-65570811 | Msa0615950:intron | 45.0% |
| ATGCAAGTGCTATAGCCAAC+AGG | + | chr4_2:65570836-65570855 | Msa0615950:CDS | 45.0% | |
| TGCAAGTGCTATAGCCAACA+GGG | + | chr4_2:65570837-65570856 | Msa0615950:CDS | 45.0% | |
| ATGGACACACAATATGCAGC+AGG | + | chr4_2:65570871-65570890 | Msa0615950:CDS | 45.0% | |
| GATCCCAACACAATGGATGA+AGG | + | chr4_2:65569143-65569162 | Msa0615950:CDS | 45.0% | |
| !! | CAGATAGTTGGTGGTGTTCT+TGG | - | chr4_2:65569463-65569482 | None:intergenic | 45.0% |
| AGGGTAATGAGGGTCTAGAA+TGG | - | chr4_2:65569546-65569565 | None:intergenic | 45.0% | |
| TGGGTTTGTCATGCAAATGG+TGG | - | chr4_2:65569633-65569652 | None:intergenic | 45.0% | |
| GGATCATCAGACAACACAAG+CGG | + | chr4_2:65569710-65569729 | Msa0615950:CDS | 45.0% | |
| AGACAACACAAGCGGATCAT+CGG | + | chr4_2:65569718-65569737 | Msa0615950:CDS | 45.0% | |
| TGAAACAATTCCCTGAGAGC+TGG | - | chr4_2:65569788-65569807 | None:intergenic | 45.0% | |
| ATGCCAACCAACTCGAGAAA+TGG | + | chr4_2:65569830-65569849 | Msa0615950:CDS | 45.0% | |
| !! | GAACCATTTCTCGAGTTGGT+TGG | - | chr4_2:65569836-65569855 | None:intergenic | 45.0% |
| ! | TTTTGGTGGAGGTGATGAGA+TGG | + | chr4_2:65569859-65569878 | Msa0615950:CDS | 45.0% |
| !! | TGGGAGTGCTGGAATTCAAT+AGG | + | chr4_2:65569897-65569916 | Msa0615950:CDS | 45.0% |
| !! | GGGAGTGCTGGAATTCAATA+GGG | + | chr4_2:65569898-65569917 | Msa0615950:CDS | 45.0% |
| AATAGGGTCACTGCTTCTGT+TGG | + | chr4_2:65569914-65569933 | Msa0615950:CDS | 45.0% | |
| TGTTTACCTTGGTGGGACTT+GGG | - | chr4_2:65570036-65570055 | None:intergenic | 45.0% | |
| TTGTTTACCTTGGTGGGACT+TGG | - | chr4_2:65570037-65570056 | None:intergenic | 45.0% | |
| ATTGGCAACAGAAAAGTGGC+TGG | - | chr4_2:65570118-65570137 | None:intergenic | 45.0% | |
| CCAAAACTGCCCGTTAATCA+TGG | - | chr4_2:65570289-65570308 | None:intergenic | 45.0% | |
| !! | CCATGATTAACGGGCAGTTT+TGG | + | chr4_2:65570286-65570305 | Msa0615950:intron | 45.0% |
| ! | ACTGATAGAGCATCAGTGGT+TGG | + | chr4_2:65570319-65570338 | Msa0615950:CDS | 45.0% |
| TTGGTGGAGAAGAAAAGGCA+TGG | + | chr4_2:65570397-65570416 | Msa0615950:CDS | 45.0% | |
| ! | TGGAGAAGAAAAGGCATGGA+AGG | + | chr4_2:65570401-65570420 | Msa0615950:CDS | 45.0% |
| ! | GGAGAAGAAAAGGCATGGAA+GGG | + | chr4_2:65570402-65570421 | Msa0615950:CDS | 45.0% |
| !! | AAGCCTTTTGGTGATCCAGA+TGG | + | chr4_2:65570478-65570497 | Msa0615950:CDS | 45.0% |
| CTTCCATCTGGATCACCAAA+AGG | - | chr4_2:65570484-65570503 | None:intergenic | 45.0% | |
| GAGGAAATCCAAAGACAGTG+AGG | + | chr4_2:65570525-65570544 | Msa0615950:CDS | 45.0% | |
| GACATCAACCTCACTGTCTT+TGG | - | chr4_2:65570536-65570555 | None:intergenic | 45.0% | |
| !! | AAGACAGTGAGGTTGATGTC+CGG | + | chr4_2:65570536-65570555 | Msa0615950:CDS | 45.0% |
| !! | TTGCTTGCTGTTTGTGTCCA+AGG | + | chr4_2:65570609-65570628 | Msa0615950:CDS | 45.0% |
| ! | GCTGTTTGTGTCCAAGGTTT+TGG | + | chr4_2:65570615-65570634 | Msa0615950:CDS | 45.0% |
| GAACTTCATCATGTTGCAGG+TGG | + | chr4_2:65570652-65570671 | Msa0615950:CDS | 45.0% | |
| ! | ATAAGGTGTGTCACTGATGC+AGG | + | chr4_2:65570792-65570811 | Msa0615950:intron | 45.0% |
| ATGCAAGTGCTATAGCCAAC+AGG | + | chr4_2:65570836-65570855 | Msa0615950:CDS | 45.0% | |
| TGCAAGTGCTATAGCCAACA+GGG | + | chr4_2:65570837-65570856 | Msa0615950:CDS | 45.0% | |
| ATGGACACACAATATGCAGC+AGG | + | chr4_2:65570871-65570890 | Msa0615950:CDS | 45.0% | |
| GGACCCTAGTGTTCAGGATA+TGG | + | chr4_2:65569424-65569443 | Msa0615950:CDS | 50.0% | |
| TGGTCGAGGGATTGTAGCTT+TGG | - | chr4_2:65569526-65569545 | None:intergenic | 50.0% | |
| ! | TGAGGGTCTAGAATGGTCGA+GGG | - | chr4_2:65569539-65569558 | None:intergenic | 50.0% |
| ! | ATGAGGGTCTAGAATGGTCG+AGG | - | chr4_2:65569540-65569559 | None:intergenic | 50.0% |
| AGACCCTCATTACCCTTCAC+CGG | + | chr4_2:65569550-65569569 | Msa0615950:CDS | 50.0% | |
| CATCCGGTGAAGGGTAATGA+GGG | - | chr4_2:65569556-65569575 | None:intergenic | 50.0% | |
| ACATCCGGTGAAGGGTAATG+AGG | - | chr4_2:65569557-65569576 | None:intergenic | 50.0% | |
| GGTTAAGGACATCCGGTGAA+GGG | - | chr4_2:65569565-65569584 | None:intergenic | 50.0% | |
| AGGTTAAGGACATCCGGTGA+AGG | - | chr4_2:65569566-65569585 | None:intergenic | 50.0% | |
| AACAATTCCCTGAGAGCTGG+AGG | - | chr4_2:65569785-65569804 | None:intergenic | 50.0% | |
| GTGATGAGATGGAGGGAGAT+GGG | + | chr4_2:65569870-65569889 | Msa0615950:CDS | 50.0% | |
| TGATGAGATGGAGGGAGATG+GGG | + | chr4_2:65569871-65569890 | Msa0615950:CDS | 50.0% | |
| ATGGAGGGAGATGGGGATAT+GGG | + | chr4_2:65569878-65569897 | Msa0615950:CDS | 50.0% | |
| GTCACTGCTTCTGTTGGCAA+AGG | + | chr4_2:65569920-65569939 | Msa0615950:CDS | 50.0% | |
| GCTTCTGTTGGCAAAGGAAG+AGG | + | chr4_2:65569926-65569945 | Msa0615950:CDS | 50.0% | |
| TCTGTTGGCAAAGGAAGAGG+AGG | + | chr4_2:65569929-65569948 | Msa0615950:CDS | 50.0% | |
| GTGGCTGGTGACTCAATTCA+TGG | - | chr4_2:65570103-65570122 | None:intergenic | 50.0% | |
| ! | GCAGACTGATAGAGCATCAG+TGG | + | chr4_2:65570315-65570334 | Msa0615950:intron | 50.0% |
| TAAGAACCTCATGGCTGCAG+AGG | + | chr4_2:65570506-65570525 | Msa0615950:CDS | 50.0% | |
| CATGTTGCAGGTGGACATGT+TGG | + | chr4_2:65570661-65570680 | Msa0615950:CDS | 50.0% | |
| GGACCCTAGTGTTCAGGATA+TGG | + | chr4_2:65569424-65569443 | Msa0615950:CDS | 50.0% | |
| TGGTCGAGGGATTGTAGCTT+TGG | - | chr4_2:65569526-65569545 | None:intergenic | 50.0% | |
| ! | TGAGGGTCTAGAATGGTCGA+GGG | - | chr4_2:65569539-65569558 | None:intergenic | 50.0% |
| ! | ATGAGGGTCTAGAATGGTCG+AGG | - | chr4_2:65569540-65569559 | None:intergenic | 50.0% |
| AGACCCTCATTACCCTTCAC+CGG | + | chr4_2:65569550-65569569 | Msa0615950:CDS | 50.0% | |
| CATCCGGTGAAGGGTAATGA+GGG | - | chr4_2:65569556-65569575 | None:intergenic | 50.0% | |
| ACATCCGGTGAAGGGTAATG+AGG | - | chr4_2:65569557-65569576 | None:intergenic | 50.0% | |
| GGTTAAGGACATCCGGTGAA+GGG | - | chr4_2:65569565-65569584 | None:intergenic | 50.0% | |
| AGGTTAAGGACATCCGGTGA+AGG | - | chr4_2:65569566-65569585 | None:intergenic | 50.0% | |
| AACAATTCCCTGAGAGCTGG+AGG | - | chr4_2:65569785-65569804 | None:intergenic | 50.0% | |
| GTGATGAGATGGAGGGAGAT+GGG | + | chr4_2:65569870-65569889 | Msa0615950:CDS | 50.0% | |
| TGATGAGATGGAGGGAGATG+GGG | + | chr4_2:65569871-65569890 | Msa0615950:CDS | 50.0% | |
| ATGGAGGGAGATGGGGATAT+GGG | + | chr4_2:65569878-65569897 | Msa0615950:CDS | 50.0% | |
| GTCACTGCTTCTGTTGGCAA+AGG | + | chr4_2:65569920-65569939 | Msa0615950:CDS | 50.0% | |
| GCTTCTGTTGGCAAAGGAAG+AGG | + | chr4_2:65569926-65569945 | Msa0615950:CDS | 50.0% | |
| TCTGTTGGCAAAGGAAGAGG+AGG | + | chr4_2:65569929-65569948 | Msa0615950:CDS | 50.0% | |
| GTGGCTGGTGACTCAATTCA+TGG | - | chr4_2:65570103-65570122 | None:intergenic | 50.0% | |
| ! | GCAGACTGATAGAGCATCAG+TGG | + | chr4_2:65570315-65570334 | Msa0615950:intron | 50.0% |
| TAAGAACCTCATGGCTGCAG+AGG | + | chr4_2:65570506-65570525 | Msa0615950:CDS | 50.0% | |
| CATGTTGCAGGTGGACATGT+TGG | + | chr4_2:65570661-65570680 | Msa0615950:CDS | 50.0% | |
| GAGTTGGGACCCTAGTGTTC+AGG | + | chr4_2:65569418-65569437 | Msa0615950:CDS | 55.0% | |
| GGCTGTGGAGGAAGGTTCAA+AGG | - | chr4_2:65569764-65569783 | None:intergenic | 55.0% | |
| GTTGGCATGCTATAGCCTCG+AGG | - | chr4_2:65569818-65569837 | None:intergenic | 55.0% | |
| TGGTGGAGGTGATGAGATGG+AGG | + | chr4_2:65569862-65569881 | Msa0615950:CDS | 55.0% | |
| GGTGGAGGTGATGAGATGGA+GGG | + | chr4_2:65569863-65569882 | Msa0615950:CDS | 55.0% | |
| GGTGATGAGATGGAGGGAGA+TGG | + | chr4_2:65569869-65569888 | Msa0615950:CDS | 55.0% | |
| GATGGAGGGAGATGGGGATA+TGG | + | chr4_2:65569877-65569896 | Msa0615950:CDS | 55.0% | |
| ! | AGATGGGGATATGGGAGTGC+TGG | + | chr4_2:65569886-65569905 | Msa0615950:CDS | 55.0% |
| TCTCATCCCAAGTCCCACCA+AGG | + | chr4_2:65570027-65570046 | Msa0615950:CDS | 55.0% | |
| GGATTTCCTCTGCAGCCATG+AGG | - | chr4_2:65570515-65570534 | None:intergenic | 55.0% | |
| GAGTTGGGACCCTAGTGTTC+AGG | + | chr4_2:65569418-65569437 | Msa0615950:CDS | 55.0% | |
| GGCTGTGGAGGAAGGTTCAA+AGG | - | chr4_2:65569764-65569783 | None:intergenic | 55.0% | |
| GTTGGCATGCTATAGCCTCG+AGG | - | chr4_2:65569818-65569837 | None:intergenic | 55.0% | |
| TGGTGGAGGTGATGAGATGG+AGG | + | chr4_2:65569862-65569881 | Msa0615950:CDS | 55.0% | |
| GGTGGAGGTGATGAGATGGA+GGG | + | chr4_2:65569863-65569882 | Msa0615950:CDS | 55.0% | |
| GGTGATGAGATGGAGGGAGA+TGG | + | chr4_2:65569869-65569888 | Msa0615950:CDS | 55.0% | |
| GATGGAGGGAGATGGGGATA+TGG | + | chr4_2:65569877-65569896 | Msa0615950:CDS | 55.0% | |
| ! | AGATGGGGATATGGGAGTGC+TGG | + | chr4_2:65569886-65569905 | Msa0615950:CDS | 55.0% |
| TCTCATCCCAAGTCCCACCA+AGG | + | chr4_2:65570027-65570046 | Msa0615950:CDS | 55.0% | |
| GGATTTCCTCTGCAGCCATG+AGG | - | chr4_2:65570515-65570534 | None:intergenic | 55.0% | |
| TCCACAGCCTCCAGCTCTCA+GGG | + | chr4_2:65569775-65569794 | Msa0615950:CDS | 60.0% | |
| TCCACAGCCTCCAGCTCTCA+GGG | + | chr4_2:65569775-65569794 | Msa0615950:CDS | 60.0% | |
| GAGCTGGAGGCTGTGGAGGA+AGG | - | chr4_2:65569772-65569791 | None:intergenic | 65.0% | |
| CTGAGAGCTGGAGGCTGTGG+AGG | - | chr4_2:65569776-65569795 | None:intergenic | 65.0% | |
| CTCCACAGCCTCCAGCTCTC+AGG | + | chr4_2:65569774-65569793 | Msa0615950:CDS | 65.0% | |
| TCCCTGAGAGCTGGAGGCTG+TGG | - | chr4_2:65569779-65569798 | None:intergenic | 65.0% | |
| GAGCTGGAGGCTGTGGAGGA+AGG | - | chr4_2:65569772-65569791 | None:intergenic | 65.0% | |
| CTGAGAGCTGGAGGCTGTGG+AGG | - | chr4_2:65569776-65569795 | None:intergenic | 65.0% | |
| CTCCACAGCCTCCAGCTCTC+AGG | + | chr4_2:65569774-65569793 | Msa0615950:CDS | 65.0% | |
| TCCCTGAGAGCTGGAGGCTG+TGG | - | chr4_2:65569779-65569798 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 65569089 | 65570918 | 65569089 | ID=Msa0615950;Name=Msa0615950 |
| chr4_2 | mRNA | 65569089 | 65570918 | 65569089 | ID=Msa0615950-mRNA-1;Parent=Msa0615950;Name=Msa0615950-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.5|0|1|1|1|3|0|486 |
| chr4_2 | exon | 65569089 | 65570048 | 65569089 | ID=Msa0615950-mRNA-1:exon:18555;Parent=Msa0615950-mRNA-1 |
| chr4_2 | exon | 65570319 | 65570714 | 65570319 | ID=Msa0615950-mRNA-1:exon:18556;Parent=Msa0615950-mRNA-1 |
| chr4_2 | exon | 65570814 | 65570918 | 65570814 | ID=Msa0615950-mRNA-1:exon:18557;Parent=Msa0615950-mRNA-1 |
| chr4_2 | CDS | 65569089 | 65570048 | 65569089 | ID=Msa0615950-mRNA-1:cds;Parent=Msa0615950-mRNA-1 |
| chr4_2 | CDS | 65570319 | 65570714 | 65570319 | ID=Msa0615950-mRNA-1:cds;Parent=Msa0615950-mRNA-1 |
| chr4_2 | CDS | 65570814 | 65570918 | 65570814 | ID=Msa0615950-mRNA-1:cds;Parent=Msa0615950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
