Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0624180 | KEH30894.1 | 89.796 | 98 | 10 | 0 | 62 | 159 | 84 | 181 | 9.51e-55 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0624180 | sp|Q9SZP1|MYB4_ARATH | 41.732 | 127 | 51 | 4 | 62 | 171 | 84 | 204 | 6.72e-19 | 84.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0624180 | A0A072UMB8 | 89.796 | 98 | 10 | 0 | 62 | 159 | 84 | 181 | 4.54e-55 | 181 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0624180 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0624180 | MtrunA17_Chr4g0044421 | 89.796 | 98 | 10 | 0 | 62 | 159 | 84 | 181 | 8.75e-59 | 181 |
| Msa0624180 | MtrunA17_Chr5g0435101 | 74.000 | 50 | 13 | 0 | 62 | 111 | 83 | 132 | 1.07e-19 | 82.0 |
| Msa0624180 | MtrunA17_Chr4g0037141 | 74.419 | 43 | 11 | 0 | 62 | 104 | 84 | 126 | 6.57e-17 | 75.9 |
| Msa0624180 | MtrunA17_Chr3g0121241 | 70.455 | 44 | 13 | 0 | 61 | 104 | 113 | 156 | 4.35e-16 | 73.9 |
| Msa0624180 | MtrunA17_Chr3g0131121 | 67.442 | 43 | 14 | 0 | 62 | 104 | 84 | 126 | 4.53e-15 | 71.2 |
| Msa0624180 | MtrunA17_Chr2g0323411 | 69.767 | 43 | 13 | 0 | 62 | 104 | 84 | 126 | 4.58e-15 | 71.2 |
| Msa0624180 | MtrunA17_Chr2g0281071 | 69.767 | 43 | 13 | 0 | 62 | 104 | 85 | 127 | 5.35e-15 | 71.2 |
| Msa0624180 | MtrunA17_Chr3g0145551 | 53.571 | 56 | 20 | 1 | 69 | 124 | 1 | 50 | 8.91e-15 | 65.9 |
| Msa0624180 | MtrunA17_Chr4g0048511 | 69.767 | 43 | 13 | 0 | 62 | 104 | 85 | 127 | 9.20e-15 | 70.9 |
| Msa0624180 | MtrunA17_Chr2g0309911 | 65.217 | 46 | 16 | 0 | 61 | 106 | 82 | 127 | 8.97e-14 | 67.8 |
| Msa0624180 | MtrunA17_Chr4g0039971 | 69.231 | 39 | 12 | 0 | 66 | 104 | 89 | 127 | 9.94e-14 | 67.8 |
| Msa0624180 | MtrunA17_Chr3g0115821 | 65.116 | 43 | 15 | 0 | 62 | 104 | 84 | 126 | 2.20e-13 | 66.6 |
| Msa0624180 | MtrunA17_Chr4g0058631 | 38.961 | 77 | 34 | 1 | 66 | 129 | 88 | 164 | 2.84e-13 | 66.6 |
| Msa0624180 | MtrunA17_Chr8g0385321 | 66.667 | 39 | 13 | 0 | 66 | 104 | 88 | 126 | 3.41e-13 | 65.9 |
| Msa0624180 | MtrunA17_Chr4g0057031 | 71.795 | 39 | 11 | 0 | 66 | 104 | 88 | 126 | 4.90e-13 | 65.1 |
| Msa0624180 | MtrunA17_Chr5g0395231 | 62.500 | 40 | 15 | 0 | 65 | 104 | 14 | 53 | 6.93e-13 | 64.7 |
| Msa0624180 | MtrunA17_Chr5g0410961 | 65.116 | 43 | 15 | 0 | 62 | 104 | 84 | 126 | 7.57e-13 | 65.1 |
| Msa0624180 | MtrunA17_Chr1g0211161 | 64.103 | 39 | 14 | 0 | 66 | 104 | 89 | 127 | 1.09e-12 | 63.9 |
| Msa0624180 | MtrunA17_Chr3g0117091 | 64.103 | 39 | 14 | 0 | 66 | 104 | 88 | 126 | 1.29e-12 | 64.7 |
| Msa0624180 | MtrunA17_Chr4g0042671 | 60.465 | 43 | 17 | 0 | 62 | 104 | 84 | 126 | 1.51e-12 | 64.7 |
| Msa0624180 | MtrunA17_Chr4g0042621 | 58.140 | 43 | 18 | 0 | 62 | 104 | 10 | 52 | 1.98e-12 | 63.9 |
| Msa0624180 | MtrunA17_Chr5g0395281 | 40.476 | 84 | 33 | 1 | 38 | 104 | 43 | 126 | 2.38e-12 | 63.5 |
| Msa0624180 | MtrunA17_Chr6g0452271 | 66.667 | 39 | 13 | 0 | 66 | 104 | 88 | 126 | 3.26e-12 | 63.5 |
| Msa0624180 | MtrunA17_Chr7g0247131 | 58.140 | 43 | 18 | 0 | 62 | 104 | 50 | 92 | 4.26e-12 | 62.8 |
| Msa0624180 | MtrunA17_Chr8g0349261 | 58.140 | 43 | 18 | 0 | 62 | 104 | 86 | 128 | 7.75e-12 | 62.0 |
| Msa0624180 | MtrunA17_Chr3g0110351 | 65.854 | 41 | 14 | 0 | 66 | 106 | 88 | 128 | 8.47e-12 | 62.0 |
| Msa0624180 | MtrunA17_Chr1g0193371 | 60.465 | 43 | 17 | 0 | 62 | 104 | 84 | 126 | 8.59e-12 | 62.4 |
| Msa0624180 | MtrunA17_Chr7g0270891 | 62.791 | 43 | 16 | 0 | 62 | 104 | 84 | 126 | 1.39e-11 | 61.6 |
| Msa0624180 | MtrunA17_Chr5g0434571 | 66.667 | 39 | 13 | 0 | 66 | 104 | 124 | 162 | 1.56e-11 | 61.6 |
| Msa0624180 | MtrunA17_Chr7g0217741 | 61.538 | 39 | 15 | 0 | 66 | 104 | 88 | 126 | 1.78e-11 | 61.2 |
| Msa0624180 | MtrunA17_Chr1g0193801 | 37.500 | 104 | 32 | 3 | 66 | 169 | 88 | 158 | 2.48e-11 | 60.8 |
| Msa0624180 | MtrunA17_Chr5g0417821 | 65.116 | 43 | 15 | 0 | 62 | 104 | 79 | 121 | 4.66e-11 | 59.7 |
| Msa0624180 | MtrunA17_Chr8g0346561 | 71.429 | 35 | 10 | 0 | 62 | 96 | 84 | 118 | 5.12e-11 | 59.7 |
| Msa0624180 | MtrunA17_Chr4g0055981 | 75.758 | 33 | 8 | 0 | 61 | 93 | 126 | 158 | 9.34e-11 | 58.5 |
| Msa0624180 | MtrunA17_Chr5g0434871 | 65.714 | 35 | 12 | 0 | 61 | 95 | 11 | 45 | 9.84e-11 | 55.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0624180 | AT4G38620.1 | 41.732 | 127 | 51 | 4 | 62 | 171 | 84 | 204 | 6.84e-20 | 84.3 |
| Msa0624180 | AT1G22640.2 | 60.345 | 58 | 19 | 2 | 65 | 118 | 15 | 72 | 2.99e-18 | 78.2 |
| Msa0624180 | AT1G22640.3 | 62.295 | 61 | 19 | 2 | 62 | 118 | 27 | 87 | 5.54e-18 | 77.8 |
| Msa0624180 | AT3G13540.1 | 72.727 | 44 | 12 | 0 | 61 | 104 | 94 | 137 | 1.24e-17 | 77.8 |
| Msa0624180 | AT1G22640.1 | 57.353 | 68 | 25 | 2 | 62 | 125 | 84 | 151 | 1.85e-17 | 77.4 |
| Msa0624180 | AT4G34990.1 | 40.708 | 113 | 59 | 2 | 62 | 171 | 84 | 191 | 1.33e-16 | 75.5 |
| Msa0624180 | AT4G09460.1 | 48.000 | 75 | 31 | 1 | 62 | 128 | 84 | 158 | 2.60e-16 | 73.9 |
| Msa0624180 | AT1G35515.1 | 68.182 | 44 | 14 | 0 | 62 | 105 | 84 | 127 | 3.92e-16 | 73.2 |
| Msa0624180 | AT4G28110.2 | 65.116 | 43 | 15 | 0 | 63 | 105 | 1 | 43 | 7.77e-16 | 72.0 |
| Msa0624180 | AT2G16720.1 | 65.455 | 55 | 17 | 2 | 62 | 114 | 84 | 138 | 9.20e-16 | 73.2 |
| Msa0624180 | AT4G21440.1 | 77.500 | 40 | 9 | 0 | 66 | 105 | 88 | 127 | 1.00e-15 | 73.6 |
| Msa0624180 | AT1G71030.2 | 47.826 | 69 | 36 | 0 | 62 | 130 | 38 | 106 | 3.90e-15 | 69.7 |
| Msa0624180 | AT1G71030.1 | 47.826 | 69 | 36 | 0 | 62 | 130 | 52 | 120 | 7.40e-15 | 69.3 |
| Msa0624180 | AT3G02940.2 | 74.419 | 43 | 11 | 0 | 62 | 104 | 84 | 126 | 7.57e-15 | 70.9 |
| Msa0624180 | AT3G02940.1 | 74.419 | 43 | 11 | 0 | 62 | 104 | 84 | 126 | 8.67e-15 | 70.9 |
| Msa0624180 | AT3G02940.3 | 74.419 | 43 | 11 | 0 | 62 | 104 | 84 | 126 | 8.67e-15 | 70.9 |
| Msa0624180 | AT4G28110.1 | 72.500 | 40 | 11 | 0 | 66 | 105 | 88 | 127 | 1.08e-14 | 70.1 |
| Msa0624180 | AT4G05100.1 | 71.795 | 39 | 11 | 0 | 66 | 104 | 89 | 127 | 2.61e-14 | 69.7 |
| Msa0624180 | AT5G54230.1 | 70.455 | 44 | 13 | 0 | 61 | 104 | 83 | 126 | 2.63e-14 | 69.7 |
| Msa0624180 | AT5G10280.1 | 32.450 | 151 | 80 | 2 | 8 | 141 | 18 | 163 | 4.60e-14 | 68.9 |
| Msa0624180 | AT4G17785.2 | 69.767 | 43 | 13 | 0 | 62 | 104 | 85 | 127 | 5.07e-14 | 68.9 |
| Msa0624180 | AT4G17785.1 | 69.767 | 43 | 13 | 0 | 62 | 104 | 85 | 127 | 5.40e-14 | 68.9 |
| Msa0624180 | AT5G16770.4 | 69.767 | 43 | 13 | 0 | 62 | 104 | 84 | 126 | 5.45e-14 | 68.6 |
| Msa0624180 | AT5G16770.3 | 69.767 | 43 | 13 | 0 | 62 | 104 | 84 | 126 | 5.45e-14 | 68.6 |
| Msa0624180 | AT5G26660.2 | 51.562 | 64 | 21 | 1 | 66 | 129 | 57 | 110 | 5.88e-14 | 68.6 |
| Msa0624180 | AT5G16770.1 | 69.767 | 43 | 13 | 0 | 62 | 104 | 84 | 126 | 5.88e-14 | 68.6 |
| Msa0624180 | AT5G16770.2 | 69.767 | 43 | 13 | 0 | 62 | 104 | 84 | 126 | 5.88e-14 | 68.6 |
| Msa0624180 | AT5G26660.1 | 51.562 | 64 | 21 | 1 | 66 | 129 | 88 | 141 | 1.26e-13 | 67.8 |
| Msa0624180 | AT5G65230.1 | 69.231 | 39 | 12 | 0 | 66 | 104 | 88 | 126 | 1.72e-13 | 67.4 |
| Msa0624180 | AT3G12720.1 | 65.217 | 46 | 16 | 0 | 61 | 106 | 93 | 138 | 1.83e-13 | 67.0 |
| Msa0624180 | AT1G57560.1 | 54.098 | 61 | 28 | 0 | 66 | 126 | 88 | 148 | 2.04e-13 | 67.0 |
| Msa0624180 | AT5G62320.1 | 69.231 | 39 | 12 | 0 | 66 | 104 | 96 | 134 | 2.41e-13 | 66.2 |
| Msa0624180 | AT1G18570.1 | 71.795 | 39 | 11 | 0 | 66 | 104 | 89 | 127 | 2.60e-13 | 67.0 |
| Msa0624180 | AT4G12350.1 | 38.889 | 108 | 59 | 4 | 62 | 165 | 84 | 188 | 4.63e-13 | 65.9 |
| Msa0624180 | AT5G15310.3 | 50.000 | 50 | 25 | 0 | 62 | 111 | 5 | 54 | 5.43e-13 | 65.1 |
| Msa0624180 | AT1G57560.2 | 67.442 | 43 | 14 | 0 | 62 | 104 | 84 | 126 | 5.56e-13 | 65.5 |
| Msa0624180 | AT1G09540.1 | 67.442 | 43 | 14 | 0 | 62 | 104 | 84 | 126 | 5.98e-13 | 65.9 |
| Msa0624180 | AT4G22680.1 | 55.000 | 60 | 22 | 1 | 66 | 125 | 88 | 142 | 7.09e-13 | 65.1 |
| Msa0624180 | AT5G61420.1 | 61.538 | 39 | 15 | 0 | 66 | 104 | 9 | 47 | 3.95e-12 | 63.2 |
| Msa0624180 | AT1G34670.1 | 65.116 | 43 | 15 | 0 | 62 | 104 | 84 | 126 | 4.61e-12 | 63.5 |
| Msa0624180 | AT5G15310.1 | 52.000 | 50 | 24 | 0 | 62 | 111 | 84 | 133 | 6.40e-12 | 62.8 |
| Msa0624180 | AT5G15310.2 | 52.000 | 50 | 24 | 0 | 62 | 111 | 84 | 133 | 7.51e-12 | 62.8 |
| Msa0624180 | AT3G01140.2 | 60.465 | 43 | 17 | 0 | 62 | 104 | 84 | 126 | 8.54e-12 | 62.8 |
| Msa0624180 | AT3G01140.1 | 60.465 | 43 | 17 | 0 | 62 | 104 | 127 | 169 | 9.18e-12 | 62.8 |
| Msa0624180 | AT5G61420.2 | 61.538 | 39 | 15 | 0 | 66 | 104 | 88 | 126 | 1.02e-11 | 62.4 |
| Msa0624180 | AT5G15310.4 | 52.000 | 50 | 24 | 0 | 62 | 111 | 84 | 133 | 1.05e-11 | 61.6 |
| Msa0624180 | AT5G07700.1 | 66.667 | 39 | 13 | 0 | 66 | 104 | 88 | 126 | 1.11e-11 | 62.4 |
| Msa0624180 | AT5G07700.2 | 66.667 | 39 | 13 | 0 | 66 | 104 | 88 | 126 | 1.11e-11 | 62.4 |
| Msa0624180 | AT5G07690.1 | 66.667 | 39 | 13 | 0 | 66 | 104 | 88 | 126 | 1.17e-11 | 62.0 |
| Msa0624180 | AT3G61250.1 | 53.488 | 43 | 20 | 0 | 62 | 104 | 84 | 126 | 1.47e-11 | 61.6 |
| Msa0624180 | AT1G66230.1 | 66.667 | 39 | 13 | 0 | 66 | 104 | 88 | 126 | 3.60e-11 | 60.5 |
| Msa0624180 | AT1G74080.1 | 64.103 | 39 | 14 | 0 | 66 | 104 | 88 | 126 | 4.00e-11 | 60.5 |
| Msa0624180 | AT5G16600.1 | 66.667 | 39 | 13 | 0 | 66 | 104 | 88 | 126 | 5.73e-11 | 60.1 |
| Msa0624180 | AT4G01680.3 | 60.000 | 45 | 18 | 0 | 62 | 106 | 84 | 128 | 7.84e-11 | 59.3 |
Find 41 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTTTAAACCGTGATTATT+TGG | 0.195321 | 4_3:-2137092 | None:intergenic |
| ACACCATTTGTTGGAAAGTT+TGG | 0.222411 | 4_3:-2135629 | None:intergenic |
| AAAACCCATGTTGAAAATTA+TGG | 0.262923 | 4_3:+2137203 | Msa0624180:CDS |
| CACCATTTGTTGGAAAGTTT+GGG | 0.263178 | 4_3:-2135628 | None:intergenic |
| ATAATGAAGTTAAGAACTTT+TGG | 0.281687 | 4_3:+2137027 | Msa0624180:CDS |
| AACTCACTTGAGGTGGGGTG+GGG | 0.296404 | 4_3:+2135729 | Msa0624180:CDS |
| AAGACATTATTAAGAAGAAT+TGG | 0.337773 | 4_3:+2137174 | Msa0624180:CDS |
| CAAGGTTTAAATCCAACATT+AGG | 0.371381 | 4_3:-2137271 | None:intergenic |
| ACTCACTTGAGGTGGGGTGG+GGG | 0.382019 | 4_3:+2135730 | Msa0624180:CDS |
| GTAACTCACTTGAGGTGGGG+TGG | 0.391989 | 4_3:+2135727 | Msa0624180:CDS |
| TCTAATAGCTCAAAATCCTT+TGG | 0.394511 | 4_3:+2137146 | Msa0624180:CDS |
| TAACTCACTTGAGGTGGGGT+GGG | 0.401391 | 4_3:+2135728 | Msa0624180:CDS |
| TGGAAAGTTTGGGGAGTGTC+TGG | 0.408312 | 4_3:-2135618 | None:intergenic |
| CTAATTGCTGGGAGGTTGCC+TGG | 0.417078 | 4_3:+2136996 | Msa0624180:CDS |
| TATAGGTGGTCACTAATTGC+TGG | 0.424144 | 4_3:+2136984 | Msa0624180:intron |
| TCCCCAAACTTTCCAACAAA+TGG | 0.437473 | 4_3:+2135626 | Msa0624180:CDS |
| GGATCTTAGTGCTGCTCATC+GGG | 0.458481 | 4_3:+2135691 | Msa0624180:CDS |
| GGGATCTTAGTGCTGCTCAT+CGG | 0.475163 | 4_3:+2135690 | Msa0624180:CDS |
| GTACTCTCAAATGCTGCAAA+AGG | 0.491787 | 4_3:+2137230 | Msa0624180:CDS |
| ATGTTCATAGTGAGAGATCA+AGG | 0.493988 | 4_3:-2137289 | None:intergenic |
| AATAATGTCTTTCAAGCCAA+AGG | 0.495070 | 4_3:-2137162 | None:intergenic |
| TTTGAGCTATTAGACATGAC+TGG | 0.497682 | 4_3:-2137137 | None:intergenic |
| GTCTCCATATCATGCGATCA+TGG | 0.504781 | 4_3:+2135583 | None:intergenic |
| GTGGGTAACTCACTTGAGGT+GGG | 0.510088 | 4_3:+2135723 | Msa0624180:CDS |
| GTGGCTTTGACACCATTTGT+TGG | 0.516154 | 4_3:-2135638 | None:intergenic |
| TGGGAGGTTGCCTGGACGTA+CGG | 0.521636 | 4_3:+2137004 | Msa0624180:CDS |
| GCTCATCGGGTCTAGTGATG+TGG | 0.528717 | 4_3:+2135704 | Msa0624180:CDS |
| ACTTCATTATCCGTACGTCC+AGG | 0.544999 | 4_3:-2137014 | None:intergenic |
| TGTGGGTAACTCACTTGAGG+TGG | 0.547050 | 4_3:+2135722 | Msa0624180:CDS |
| CAAAGCCACAAAATTCTGCT+TGG | 0.568288 | 4_3:+2135652 | Msa0624180:CDS |
| CTCATCGGGTCTAGTGATGT+GGG | 0.570476 | 4_3:+2135705 | Msa0624180:CDS |
| TGACTCATATGACCTAATGT+TGG | 0.582303 | 4_3:+2137259 | Msa0624180:CDS |
| CTCAAATGCTGCAAAAGGCA+AGG | 0.583441 | 4_3:+2137235 | Msa0624180:CDS |
| GGTATTGATCCAAATAATCA+CGG | 0.583578 | 4_3:+2137083 | Msa0624180:CDS |
| TGGGTAACTCACTTGAGGTG+GGG | 0.588922 | 4_3:+2135724 | Msa0624180:CDS |
| ACCATTTGTTGGAAAGTTTG+GGG | 0.592295 | 4_3:-2135627 | None:intergenic |
| ATAGGTGGTCACTAATTGCT+GGG | 0.593843 | 4_3:+2136985 | Msa0624180:intron |
| TGATGTGGGTAACTCACTTG+AGG | 0.638949 | 4_3:+2135719 | Msa0624180:CDS |
| GCTTGGTGTGAGAACATGAG+TGG | 0.674019 | 4_3:+2135669 | Msa0624180:CDS |
| CTTGGTGTGAGAACATGAGT+GGG | 0.675048 | 4_3:+2135670 | Msa0624180:CDS |
| GGTGGTCACTAATTGCTGGG+AGG | 0.747477 | 4_3:+2136988 | Msa0624180:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCTGTAATTAATTTTA+TGG | + | chr4_3:2136449-2136468 | Msa0624180:intron | 10.0% |
| !!! | TTTTCTGTAATTAATTTTAT+GGG | + | chr4_3:2136450-2136469 | Msa0624180:intron | 10.0% |
| !! | TAGAATTTATTATAATATGA+AGG | + | chr4_3:2136635-2136654 | Msa0624180:intron | 10.0% |
| !! | ATATAAGAAAAAAATTGATT+AGG | + | chr4_3:2137057-2137076 | Msa0624180:CDS | 10.0% |
| !!! | TTTTTCTGTAATTAATTTTA+TGG | + | chr4_3:2136449-2136468 | Msa0624180:intron | 10.0% |
| !!! | TTTTCTGTAATTAATTTTAT+GGG | + | chr4_3:2136450-2136469 | Msa0624180:intron | 10.0% |
| !! | TAGAATTTATTATAATATGA+AGG | + | chr4_3:2136635-2136654 | Msa0624180:intron | 10.0% |
| !! | ATATAAGAAAAAAATTGATT+AGG | + | chr4_3:2137057-2137076 | Msa0624180:CDS | 10.0% |
| !!! | ATATTCATATACCTAATTTT+AGG | + | chr4_3:2135852-2135871 | Msa0624180:intron | 15.0% |
| !! | TGCTAAAAAAGATTAAATTA+GGG | + | chr4_3:2136353-2136372 | Msa0624180:intron | 15.0% |
| !!! | TGATATGTTTGAATATTTTT+CGG | + | chr4_3:2136612-2136631 | Msa0624180:intron | 15.0% |
| !!! | ATATTCATATACCTAATTTT+AGG | + | chr4_3:2135852-2135871 | Msa0624180:intron | 15.0% |
| !! | TGCTAAAAAAGATTAAATTA+GGG | + | chr4_3:2136353-2136372 | Msa0624180:intron | 15.0% |
| !!! | TGATATGTTTGAATATTTTT+CGG | + | chr4_3:2136612-2136631 | Msa0624180:intron | 15.0% |
| !! | CTGCTAAAAAAGATTAAATT+AGG | + | chr4_3:2136352-2136371 | Msa0624180:intron | 20.0% |
| !! | TAAAAAAGATTAAATTAGGG+TGG | + | chr4_3:2136356-2136375 | Msa0624180:intron | 20.0% |
| !! | ACAAAATTTAGTAACACATA+TGG | - | chr4_3:2136414-2136433 | None:intergenic | 20.0% |
| !! | GTGTCAAAAATTAATATTAG+AGG | + | chr4_3:2136574-2136593 | Msa0624180:intron | 20.0% |
| !! | ATTGAATATGATTCATGTAT+AGG | + | chr4_3:2136967-2136986 | Msa0624180:intron | 20.0% |
| !!! | ATAATGAAGTTAAGAACTTT+TGG | + | chr4_3:2137027-2137046 | Msa0624180:CDS | 20.0% |
| !! | AAGAAAAAAATTGATTAGGA+AGG | + | chr4_3:2137061-2137080 | Msa0624180:CDS | 20.0% |
| !! | AGAAAAAAATTGATTAGGAA+GGG | + | chr4_3:2137062-2137081 | Msa0624180:CDS | 20.0% |
| !! | AAGACATTATTAAGAAGAAT+TGG | + | chr4_3:2137174-2137193 | Msa0624180:CDS | 20.0% |
| !! | CTGCTAAAAAAGATTAAATT+AGG | + | chr4_3:2136352-2136371 | Msa0624180:intron | 20.0% |
| !! | TAAAAAAGATTAAATTAGGG+TGG | + | chr4_3:2136356-2136375 | Msa0624180:intron | 20.0% |
| !! | ACAAAATTTAGTAACACATA+TGG | - | chr4_3:2136414-2136433 | None:intergenic | 20.0% |
| !! | GTGTCAAAAATTAATATTAG+AGG | + | chr4_3:2136574-2136593 | Msa0624180:intron | 20.0% |
| !! | ATTGAATATGATTCATGTAT+AGG | + | chr4_3:2136967-2136986 | Msa0624180:intron | 20.0% |
| !!! | ATAATGAAGTTAAGAACTTT+TGG | + | chr4_3:2137027-2137046 | Msa0624180:CDS | 20.0% |
| !! | AAGAAAAAAATTGATTAGGA+AGG | + | chr4_3:2137061-2137080 | Msa0624180:CDS | 20.0% |
| !! | AGAAAAAAATTGATTAGGAA+GGG | + | chr4_3:2137062-2137081 | Msa0624180:CDS | 20.0% |
| !! | AAGACATTATTAAGAAGAAT+TGG | + | chr4_3:2137174-2137193 | Msa0624180:CDS | 20.0% |
| ! | GAATGTTGAATATATATGAG+AGG | + | chr4_3:2135829-2135848 | Msa0624180:intron | 25.0% |
| ! | TTATCTTTGATACCACAATT+GGG | - | chr4_3:2135952-2135971 | None:intergenic | 25.0% |
| ! | ATTATCTTTGATACCACAAT+TGG | - | chr4_3:2135953-2135972 | None:intergenic | 25.0% |
| ! | AATTGTGGTATCAAAGATAA+TGG | + | chr4_3:2135952-2135971 | Msa0624180:intron | 25.0% |
| ! | TTTAGTAACACATATGGAAA+GGG | - | chr4_3:2136408-2136427 | None:intergenic | 25.0% |
| ! | ATTTAGTAACACATATGGAA+AGG | - | chr4_3:2136409-2136428 | None:intergenic | 25.0% |
| !! | GTTACTAAATTTTGTGACAA+AGG | + | chr4_3:2136419-2136438 | Msa0624180:intron | 25.0% |
| ! | TTTGTTTATTTAGCAAGAAG+TGG | + | chr4_3:2136482-2136501 | Msa0624180:intron | 25.0% |
| ! | ATGTTTGATTCTACTATTGT+AGG | + | chr4_3:2136552-2136571 | Msa0624180:intron | 25.0% |
| ! | ATCAAGTAATTGAGTTCAAA+TGG | + | chr4_3:2136778-2136797 | Msa0624180:intron | 25.0% |
| ! | CTAAACTCTAATTATGAAGT+GGG | - | chr4_3:2136899-2136918 | None:intergenic | 25.0% |
| ! | TCTAAACTCTAATTATGAAG+TGG | - | chr4_3:2136900-2136919 | None:intergenic | 25.0% |
| ! | AAAACCCATGTTGAAAATTA+TGG | + | chr4_3:2137203-2137222 | Msa0624180:CDS | 25.0% |
| !! | TTCACCATAATTTTCAACAT+GGG | - | chr4_3:2137210-2137229 | None:intergenic | 25.0% |
| ! | GAATGTTGAATATATATGAG+AGG | + | chr4_3:2135829-2135848 | Msa0624180:intron | 25.0% |
| ! | TTATCTTTGATACCACAATT+GGG | - | chr4_3:2135952-2135971 | None:intergenic | 25.0% |
| ! | ATTATCTTTGATACCACAAT+TGG | - | chr4_3:2135953-2135972 | None:intergenic | 25.0% |
| ! | AATTGTGGTATCAAAGATAA+TGG | + | chr4_3:2135952-2135971 | Msa0624180:intron | 25.0% |
| ! | TTTAGTAACACATATGGAAA+GGG | - | chr4_3:2136408-2136427 | None:intergenic | 25.0% |
| ! | ATTTAGTAACACATATGGAA+AGG | - | chr4_3:2136409-2136428 | None:intergenic | 25.0% |
| !! | GTTACTAAATTTTGTGACAA+AGG | + | chr4_3:2136419-2136438 | Msa0624180:intron | 25.0% |
| ! | TTTGTTTATTTAGCAAGAAG+TGG | + | chr4_3:2136482-2136501 | Msa0624180:intron | 25.0% |
| ! | ATGTTTGATTCTACTATTGT+AGG | + | chr4_3:2136552-2136571 | Msa0624180:intron | 25.0% |
| ! | ATCAAGTAATTGAGTTCAAA+TGG | + | chr4_3:2136778-2136797 | Msa0624180:intron | 25.0% |
| ! | CTAAACTCTAATTATGAAGT+GGG | - | chr4_3:2136899-2136918 | None:intergenic | 25.0% |
| ! | TCTAAACTCTAATTATGAAG+TGG | - | chr4_3:2136900-2136919 | None:intergenic | 25.0% |
| ! | AAAACCCATGTTGAAAATTA+TGG | + | chr4_3:2137203-2137222 | Msa0624180:CDS | 25.0% |
| !! | TTCACCATAATTTTCAACAT+GGG | - | chr4_3:2137210-2137229 | None:intergenic | 25.0% |
| ATACCACAATTGGGTTATAA+GGG | - | chr4_3:2135943-2135962 | None:intergenic | 30.0% | |
| AATCTAGATGAAAAAGCTTC+TGG | + | chr4_3:2136063-2136082 | Msa0624180:intron | 30.0% | |
| !! | CACTCAAAACTTTAAGACAT+TGG | - | chr4_3:2136226-2136245 | None:intergenic | 30.0% |
| !!! | CAATGTCTTAAAGTTTTGAG+TGG | + | chr4_3:2136224-2136243 | Msa0624180:intron | 30.0% |
| TGTGTTCAATAACATTTGTG+TGG | + | chr4_3:2136253-2136272 | Msa0624180:intron | 30.0% | |
| !!! | AATCTTTTTTAGCAGCAATC+AGG | - | chr4_3:2136347-2136366 | None:intergenic | 30.0% |
| AGAATGAATCAATTCCTAAG+TGG | + | chr4_3:2136817-2136836 | Msa0624180:intron | 30.0% | |
| GAATATGATTCATGTATAGG+TGG | + | chr4_3:2136970-2136989 | Msa0624180:intron | 30.0% | |
| !! | GGTATTGATCCAAATAATCA+CGG | + | chr4_3:2137083-2137102 | Msa0624180:CDS | 30.0% |
| TGGTTTAAACCGTGATTATT+TGG | - | chr4_3:2137095-2137114 | None:intergenic | 30.0% | |
| TCTAATAGCTCAAAATCCTT+TGG | + | chr4_3:2137146-2137165 | Msa0624180:CDS | 30.0% | |
| AATAATGTCTTTCAAGCCAA+AGG | - | chr4_3:2137165-2137184 | None:intergenic | 30.0% | |
| ! | CTTCACCATAATTTTCAACA+TGG | - | chr4_3:2137211-2137230 | None:intergenic | 30.0% |
| CAAGGTTTAAATCCAACATT+AGG | - | chr4_3:2137274-2137293 | None:intergenic | 30.0% | |
| ATACCACAATTGGGTTATAA+GGG | - | chr4_3:2135943-2135962 | None:intergenic | 30.0% | |
| AATCTAGATGAAAAAGCTTC+TGG | + | chr4_3:2136063-2136082 | Msa0624180:intron | 30.0% | |
| !! | CACTCAAAACTTTAAGACAT+TGG | - | chr4_3:2136226-2136245 | None:intergenic | 30.0% |
| !!! | CAATGTCTTAAAGTTTTGAG+TGG | + | chr4_3:2136224-2136243 | Msa0624180:intron | 30.0% |
| TGTGTTCAATAACATTTGTG+TGG | + | chr4_3:2136253-2136272 | Msa0624180:intron | 30.0% | |
| !!! | AATCTTTTTTAGCAGCAATC+AGG | - | chr4_3:2136347-2136366 | None:intergenic | 30.0% |
| AGAATGAATCAATTCCTAAG+TGG | + | chr4_3:2136817-2136836 | Msa0624180:intron | 30.0% | |
| GAATATGATTCATGTATAGG+TGG | + | chr4_3:2136970-2136989 | Msa0624180:intron | 30.0% | |
| !! | GGTATTGATCCAAATAATCA+CGG | + | chr4_3:2137083-2137102 | Msa0624180:CDS | 30.0% |
| TGGTTTAAACCGTGATTATT+TGG | - | chr4_3:2137095-2137114 | None:intergenic | 30.0% | |
| TCTAATAGCTCAAAATCCTT+TGG | + | chr4_3:2137146-2137165 | Msa0624180:CDS | 30.0% | |
| AATAATGTCTTTCAAGCCAA+AGG | - | chr4_3:2137165-2137184 | None:intergenic | 30.0% | |
| ! | CTTCACCATAATTTTCAACA+TGG | - | chr4_3:2137211-2137230 | None:intergenic | 30.0% |
| CAAGGTTTAAATCCAACATT+AGG | - | chr4_3:2137274-2137293 | None:intergenic | 30.0% | |
| ! | ACCATTTGTTGGAAAGTTTG+GGG | - | chr4_3:2135630-2135649 | None:intergenic | 35.0% |
| ! | CACCATTTGTTGGAAAGTTT+GGG | - | chr4_3:2135631-2135650 | None:intergenic | 35.0% |
| ! | ACACCATTTGTTGGAAAGTT+TGG | - | chr4_3:2135632-2135651 | None:intergenic | 35.0% |
| CCACATCTCAACCTAAAATT+AGG | - | chr4_3:2135866-2135885 | None:intergenic | 35.0% | |
| !!! | CCTAATTTTAGGTTGAGATG+TGG | + | chr4_3:2135863-2135882 | Msa0624180:intron | 35.0% |
| GCAACCACAAGATTAGAATT+TGG | - | chr4_3:2135891-2135910 | None:intergenic | 35.0% | |
| TACCACAATTGGGTTATAAG+GGG | - | chr4_3:2135942-2135961 | None:intergenic | 35.0% | |
| GATACCACAATTGGGTTATA+AGG | - | chr4_3:2135944-2135963 | None:intergenic | 35.0% | |
| ! | ATGAAAAAGCTTCTGGTTGA+GGG | + | chr4_3:2136070-2136089 | Msa0624180:intron | 35.0% |
| ATTAGGGTGGAAAATTAGAG+AGG | + | chr4_3:2136369-2136388 | Msa0624180:intron | 35.0% | |
| TTAGGGTGGAAAATTAGAGA+GGG | + | chr4_3:2136370-2136389 | Msa0624180:intron | 35.0% | |
| ATTGAGCTCAATTACCACTT+AGG | - | chr4_3:2136834-2136853 | None:intergenic | 35.0% | |
| CTAATTATGAAGTGGGTGTT+TGG | - | chr4_3:2136892-2136911 | None:intergenic | 35.0% | |
| ! | AGACATGACTGGATTTTGAA+GGG | - | chr4_3:2137129-2137148 | None:intergenic | 35.0% |
| ! | TAGACATGACTGGATTTTGA+AGG | - | chr4_3:2137130-2137149 | None:intergenic | 35.0% |
| TTTGAGCTATTAGACATGAC+TGG | - | chr4_3:2137140-2137159 | None:intergenic | 35.0% | |
| TGACTCATATGACCTAATGT+TGG | + | chr4_3:2137259-2137278 | Msa0624180:CDS | 35.0% | |
| ! | ACCATTTGTTGGAAAGTTTG+GGG | - | chr4_3:2135630-2135649 | None:intergenic | 35.0% |
| ! | CACCATTTGTTGGAAAGTTT+GGG | - | chr4_3:2135631-2135650 | None:intergenic | 35.0% |
| ! | ACACCATTTGTTGGAAAGTT+TGG | - | chr4_3:2135632-2135651 | None:intergenic | 35.0% |
| CCACATCTCAACCTAAAATT+AGG | - | chr4_3:2135866-2135885 | None:intergenic | 35.0% | |
| !!! | CCTAATTTTAGGTTGAGATG+TGG | + | chr4_3:2135863-2135882 | Msa0624180:intron | 35.0% |
| GCAACCACAAGATTAGAATT+TGG | - | chr4_3:2135891-2135910 | None:intergenic | 35.0% | |
| TACCACAATTGGGTTATAAG+GGG | - | chr4_3:2135942-2135961 | None:intergenic | 35.0% | |
| GATACCACAATTGGGTTATA+AGG | - | chr4_3:2135944-2135963 | None:intergenic | 35.0% | |
| ! | ATGAAAAAGCTTCTGGTTGA+GGG | + | chr4_3:2136070-2136089 | Msa0624180:intron | 35.0% |
| ATTAGGGTGGAAAATTAGAG+AGG | + | chr4_3:2136369-2136388 | Msa0624180:intron | 35.0% | |
| TTAGGGTGGAAAATTAGAGA+GGG | + | chr4_3:2136370-2136389 | Msa0624180:intron | 35.0% | |
| ATTGAGCTCAATTACCACTT+AGG | - | chr4_3:2136834-2136853 | None:intergenic | 35.0% | |
| CTAATTATGAAGTGGGTGTT+TGG | - | chr4_3:2136892-2136911 | None:intergenic | 35.0% | |
| ! | AGACATGACTGGATTTTGAA+GGG | - | chr4_3:2137129-2137148 | None:intergenic | 35.0% |
| ! | TAGACATGACTGGATTTTGA+AGG | - | chr4_3:2137130-2137149 | None:intergenic | 35.0% |
| TTTGAGCTATTAGACATGAC+TGG | - | chr4_3:2137140-2137159 | None:intergenic | 35.0% | |
| TGACTCATATGACCTAATGT+TGG | + | chr4_3:2137259-2137278 | Msa0624180:CDS | 35.0% | |
| TCCCCAAACTTTCCAACAAA+TGG | + | chr4_3:2135626-2135645 | Msa0624180:CDS | 40.0% | |
| CAAAGCCACAAAATTCTGCT+TGG | + | chr4_3:2135652-2135671 | Msa0624180:CDS | 40.0% | |
| ! | TCACACCAAGCAGAATTTTG+TGG | - | chr4_3:2135660-2135679 | None:intergenic | 40.0% |
| ! | TGATTAGTCACACGTCAACT+TGG | + | chr4_3:2135798-2135817 | Msa0624180:intron | 40.0% |
| ACACGTCAACTTGGAATTGA+TGG | + | chr4_3:2135807-2135826 | Msa0624180:intron | 40.0% | |
| GGTGCCAAATTCTAATCTTG+TGG | + | chr4_3:2135884-2135903 | Msa0624180:intron | 40.0% | |
| TCAGAATGACTTTCGGTACA+AGG | - | chr4_3:2135989-2136008 | None:intergenic | 40.0% | |
| ACCTTGGTCAGAATGACTTT+CGG | - | chr4_3:2135996-2136015 | None:intergenic | 40.0% | |
| ! | GATGAAAAAGCTTCTGGTTG+AGG | + | chr4_3:2136069-2136088 | Msa0624180:intron | 40.0% |
| ! | TGAAAAAGCTTCTGGTTGAG+GGG | + | chr4_3:2136071-2136090 | Msa0624180:intron | 40.0% |
| TGCGAGTTCATCACTAAGTT+GGG | - | chr4_3:2136103-2136122 | None:intergenic | 40.0% | |
| TAGTGATGAACTCGCACTTT+AGG | + | chr4_3:2136107-2136126 | Msa0624180:intron | 40.0% | |
| AGTGATGAACTCGCACTTTA+GGG | + | chr4_3:2136108-2136127 | Msa0624180:intron | 40.0% | |
| AACAATACACACCATGGTGT+TGG | - | chr4_3:2136323-2136342 | None:intergenic | 40.0% | |
| TCAGGAAACAATACACACCA+TGG | - | chr4_3:2136329-2136348 | None:intergenic | 40.0% | |
| GGTAATTGAGCTCAATTGCT+TGG | + | chr4_3:2136838-2136857 | Msa0624180:intron | 40.0% | |
| TATAGGTGGTCACTAATTGC+TGG | + | chr4_3:2136984-2137003 | Msa0624180:intron | 40.0% | |
| ATAGGTGGTCACTAATTGCT+GGG | + | chr4_3:2136985-2137004 | Msa0624180:intron | 40.0% | |
| !! | GACATGACTGGATTTTGAAG+GGG | - | chr4_3:2137128-2137147 | None:intergenic | 40.0% |
| GTACTCTCAAATGCTGCAAA+AGG | + | chr4_3:2137230-2137249 | Msa0624180:CDS | 40.0% | |
| TCCCCAAACTTTCCAACAAA+TGG | + | chr4_3:2135626-2135645 | Msa0624180:CDS | 40.0% | |
| CAAAGCCACAAAATTCTGCT+TGG | + | chr4_3:2135652-2135671 | Msa0624180:CDS | 40.0% | |
| ! | TCACACCAAGCAGAATTTTG+TGG | - | chr4_3:2135660-2135679 | None:intergenic | 40.0% |
| ! | TGATTAGTCACACGTCAACT+TGG | + | chr4_3:2135798-2135817 | Msa0624180:intron | 40.0% |
| ACACGTCAACTTGGAATTGA+TGG | + | chr4_3:2135807-2135826 | Msa0624180:intron | 40.0% | |
| GGTGCCAAATTCTAATCTTG+TGG | + | chr4_3:2135884-2135903 | Msa0624180:intron | 40.0% | |
| TCAGAATGACTTTCGGTACA+AGG | - | chr4_3:2135989-2136008 | None:intergenic | 40.0% | |
| ACCTTGGTCAGAATGACTTT+CGG | - | chr4_3:2135996-2136015 | None:intergenic | 40.0% | |
| ! | GATGAAAAAGCTTCTGGTTG+AGG | + | chr4_3:2136069-2136088 | Msa0624180:intron | 40.0% |
| ! | TGAAAAAGCTTCTGGTTGAG+GGG | + | chr4_3:2136071-2136090 | Msa0624180:intron | 40.0% |
| TGCGAGTTCATCACTAAGTT+GGG | - | chr4_3:2136103-2136122 | None:intergenic | 40.0% | |
| TAGTGATGAACTCGCACTTT+AGG | + | chr4_3:2136107-2136126 | Msa0624180:intron | 40.0% | |
| AGTGATGAACTCGCACTTTA+GGG | + | chr4_3:2136108-2136127 | Msa0624180:intron | 40.0% | |
| AACAATACACACCATGGTGT+TGG | - | chr4_3:2136323-2136342 | None:intergenic | 40.0% | |
| TCAGGAAACAATACACACCA+TGG | - | chr4_3:2136329-2136348 | None:intergenic | 40.0% | |
| GGTAATTGAGCTCAATTGCT+TGG | + | chr4_3:2136838-2136857 | Msa0624180:intron | 40.0% | |
| TATAGGTGGTCACTAATTGC+TGG | + | chr4_3:2136984-2137003 | Msa0624180:intron | 40.0% | |
| ATAGGTGGTCACTAATTGCT+GGG | + | chr4_3:2136985-2137004 | Msa0624180:intron | 40.0% | |
| !! | GACATGACTGGATTTTGAAG+GGG | - | chr4_3:2137128-2137147 | None:intergenic | 40.0% |
| GTACTCTCAAATGCTGCAAA+AGG | + | chr4_3:2137230-2137249 | Msa0624180:CDS | 40.0% | |
| !! | GTGGCTTTGACACCATTTGT+TGG | - | chr4_3:2135641-2135660 | None:intergenic | 45.0% |
| ! | CTTGGTGTGAGAACATGAGT+GGG | + | chr4_3:2135670-2135689 | Msa0624180:CDS | 45.0% |
| TGATGTGGGTAACTCACTTG+AGG | + | chr4_3:2135719-2135738 | Msa0624180:CDS | 45.0% | |
| GACCCCTTATAACCCAATTG+TGG | + | chr4_3:2135937-2135956 | Msa0624180:intron | 45.0% | |
| ACCGAAAGTCATTCTGACCA+AGG | + | chr4_3:2135992-2136011 | Msa0624180:intron | 45.0% | |
| ! | TTCTGACCAAGGTGTTCAAG+CGG | + | chr4_3:2136003-2136022 | Msa0624180:intron | 45.0% |
| ! | ATCCCGTTGATGGAGTACAA+CGG | + | chr4_3:2136029-2136048 | Msa0624180:intron | 45.0% |
| GTGCGAGTTCATCACTAAGT+TGG | - | chr4_3:2136104-2136123 | None:intergenic | 45.0% | |
| ! | GCACTTTAGGGAGAGATTGT+TGG | + | chr4_3:2136120-2136139 | Msa0624180:intron | 45.0% |
| GGTTCGGAGGATCATTACAT+TGG | - | chr4_3:2136290-2136309 | None:intergenic | 45.0% | |
| ! | GAAGTGGGTGTTTGGTTTCT+TGG | - | chr4_3:2136884-2136903 | None:intergenic | 45.0% |
| ACTTCATTATCCGTACGTCC+AGG | - | chr4_3:2137017-2137036 | None:intergenic | 45.0% | |
| ! | TTTGAAGGGGAGGGATTTTG+TGG | - | chr4_3:2137115-2137134 | None:intergenic | 45.0% |
| !! | TGACTGGATTTTGAAGGGGA+GGG | - | chr4_3:2137124-2137143 | None:intergenic | 45.0% |
| !! | ATGACTGGATTTTGAAGGGG+AGG | - | chr4_3:2137125-2137144 | None:intergenic | 45.0% |
| CTCAAATGCTGCAAAAGGCA+AGG | + | chr4_3:2137235-2137254 | Msa0624180:CDS | 45.0% | |
| !! | GTGGCTTTGACACCATTTGT+TGG | - | chr4_3:2135641-2135660 | None:intergenic | 45.0% |
| ! | CTTGGTGTGAGAACATGAGT+GGG | + | chr4_3:2135670-2135689 | Msa0624180:CDS | 45.0% |
| TGATGTGGGTAACTCACTTG+AGG | + | chr4_3:2135719-2135738 | Msa0624180:CDS | 45.0% | |
| GACCCCTTATAACCCAATTG+TGG | + | chr4_3:2135937-2135956 | Msa0624180:intron | 45.0% | |
| ACCGAAAGTCATTCTGACCA+AGG | + | chr4_3:2135992-2136011 | Msa0624180:intron | 45.0% | |
| ! | TTCTGACCAAGGTGTTCAAG+CGG | + | chr4_3:2136003-2136022 | Msa0624180:intron | 45.0% |
| ! | ATCCCGTTGATGGAGTACAA+CGG | + | chr4_3:2136029-2136048 | Msa0624180:intron | 45.0% |
| GTGCGAGTTCATCACTAAGT+TGG | - | chr4_3:2136104-2136123 | None:intergenic | 45.0% | |
| ! | GCACTTTAGGGAGAGATTGT+TGG | + | chr4_3:2136120-2136139 | Msa0624180:intron | 45.0% |
| GGTTCGGAGGATCATTACAT+TGG | - | chr4_3:2136290-2136309 | None:intergenic | 45.0% | |
| ! | GAAGTGGGTGTTTGGTTTCT+TGG | - | chr4_3:2136884-2136903 | None:intergenic | 45.0% |
| ACTTCATTATCCGTACGTCC+AGG | - | chr4_3:2137017-2137036 | None:intergenic | 45.0% | |
| ! | TTTGAAGGGGAGGGATTTTG+TGG | - | chr4_3:2137115-2137134 | None:intergenic | 45.0% |
| !! | TGACTGGATTTTGAAGGGGA+GGG | - | chr4_3:2137124-2137143 | None:intergenic | 45.0% |
| !! | ATGACTGGATTTTGAAGGGG+AGG | - | chr4_3:2137125-2137144 | None:intergenic | 45.0% |
| CTCAAATGCTGCAAAAGGCA+AGG | + | chr4_3:2137235-2137254 | Msa0624180:CDS | 45.0% | |
| !! | TGGAAAGTTTGGGGAGTGTC+TGG | - | chr4_3:2135621-2135640 | None:intergenic | 50.0% |
| !! | GCTTGGTGTGAGAACATGAG+TGG | + | chr4_3:2135669-2135688 | Msa0624180:CDS | 50.0% |
| ! | GGGATCTTAGTGCTGCTCAT+CGG | + | chr4_3:2135690-2135709 | Msa0624180:CDS | 50.0% |
| ! | GGATCTTAGTGCTGCTCATC+GGG | + | chr4_3:2135691-2135710 | Msa0624180:CDS | 50.0% |
| CTCATCGGGTCTAGTGATGT+GGG | + | chr4_3:2135705-2135724 | Msa0624180:CDS | 50.0% | |
| TGTGGGTAACTCACTTGAGG+TGG | + | chr4_3:2135722-2135741 | Msa0624180:CDS | 50.0% | |
| GTGGGTAACTCACTTGAGGT+GGG | + | chr4_3:2135723-2135742 | Msa0624180:CDS | 50.0% | |
| TGGGTAACTCACTTGAGGTG+GGG | + | chr4_3:2135724-2135743 | Msa0624180:CDS | 50.0% | |
| TAACTCACTTGAGGTGGGGT+GGG | + | chr4_3:2135728-2135747 | Msa0624180:CDS | 50.0% | |
| ! | ACCATGGTGTTGGATCACGA+GGG | - | chr4_3:2136313-2136332 | None:intergenic | 50.0% |
| !! | TGGAAAGTTTGGGGAGTGTC+TGG | - | chr4_3:2135621-2135640 | None:intergenic | 50.0% |
| !! | GCTTGGTGTGAGAACATGAG+TGG | + | chr4_3:2135669-2135688 | Msa0624180:CDS | 50.0% |
| ! | GGGATCTTAGTGCTGCTCAT+CGG | + | chr4_3:2135690-2135709 | Msa0624180:CDS | 50.0% |
| ! | GGATCTTAGTGCTGCTCATC+GGG | + | chr4_3:2135691-2135710 | Msa0624180:CDS | 50.0% |
| CTCATCGGGTCTAGTGATGT+GGG | + | chr4_3:2135705-2135724 | Msa0624180:CDS | 50.0% | |
| TGTGGGTAACTCACTTGAGG+TGG | + | chr4_3:2135722-2135741 | Msa0624180:CDS | 50.0% | |
| GTGGGTAACTCACTTGAGGT+GGG | + | chr4_3:2135723-2135742 | Msa0624180:CDS | 50.0% | |
| TGGGTAACTCACTTGAGGTG+GGG | + | chr4_3:2135724-2135743 | Msa0624180:CDS | 50.0% | |
| TAACTCACTTGAGGTGGGGT+GGG | + | chr4_3:2135728-2135747 | Msa0624180:CDS | 50.0% | |
| ! | ACCATGGTGTTGGATCACGA+GGG | - | chr4_3:2136313-2136332 | None:intergenic | 50.0% |
| GCTCATCGGGTCTAGTGATG+TGG | + | chr4_3:2135704-2135723 | Msa0624180:CDS | 55.0% | |
| GTAACTCACTTGAGGTGGGG+TGG | + | chr4_3:2135727-2135746 | Msa0624180:CDS | 55.0% | |
| AACTCACTTGAGGTGGGGTG+GGG | + | chr4_3:2135729-2135748 | Msa0624180:CDS | 55.0% | |
| GATACGCCGCTTGAACACCT+TGG | - | chr4_3:2136012-2136031 | None:intergenic | 55.0% | |
| CGCCGTTGTACTCCATCAAC+GGG | - | chr4_3:2136034-2136053 | None:intergenic | 55.0% | |
| CCGCCGTTGTACTCCATCAA+CGG | - | chr4_3:2136035-2136054 | None:intergenic | 55.0% | |
| ! | CCGTTGATGGAGTACAACGG+CGG | + | chr4_3:2136032-2136051 | Msa0624180:intron | 55.0% |
| TGTTGGATCACGAGGGGGTT+CGG | - | chr4_3:2136306-2136325 | None:intergenic | 55.0% | |
| ! | CATGGTGTTGGATCACGAGG+GGG | - | chr4_3:2136311-2136330 | None:intergenic | 55.0% |
| ! | CCATGGTGTTGGATCACGAG+GGG | - | chr4_3:2136312-2136331 | None:intergenic | 55.0% |
| ! | CACCATGGTGTTGGATCACG+AGG | - | chr4_3:2136314-2136333 | None:intergenic | 55.0% |
| GGTGGTCACTAATTGCTGGG+AGG | + | chr4_3:2136988-2137007 | Msa0624180:intron | 55.0% | |
| CTAATTGCTGGGAGGTTGCC+TGG | + | chr4_3:2136996-2137015 | Msa0624180:CDS | 55.0% | |
| GCTCATCGGGTCTAGTGATG+TGG | + | chr4_3:2135704-2135723 | Msa0624180:CDS | 55.0% | |
| GTAACTCACTTGAGGTGGGG+TGG | + | chr4_3:2135727-2135746 | Msa0624180:CDS | 55.0% | |
| AACTCACTTGAGGTGGGGTG+GGG | + | chr4_3:2135729-2135748 | Msa0624180:CDS | 55.0% | |
| GATACGCCGCTTGAACACCT+TGG | - | chr4_3:2136012-2136031 | None:intergenic | 55.0% | |
| CGCCGTTGTACTCCATCAAC+GGG | - | chr4_3:2136034-2136053 | None:intergenic | 55.0% | |
| CCGCCGTTGTACTCCATCAA+CGG | - | chr4_3:2136035-2136054 | None:intergenic | 55.0% | |
| ! | CCGTTGATGGAGTACAACGG+CGG | + | chr4_3:2136032-2136051 | Msa0624180:intron | 55.0% |
| TGTTGGATCACGAGGGGGTT+CGG | - | chr4_3:2136306-2136325 | None:intergenic | 55.0% | |
| ! | CATGGTGTTGGATCACGAGG+GGG | - | chr4_3:2136311-2136330 | None:intergenic | 55.0% |
| ! | CCATGGTGTTGGATCACGAG+GGG | - | chr4_3:2136312-2136331 | None:intergenic | 55.0% |
| ! | CACCATGGTGTTGGATCACG+AGG | - | chr4_3:2136314-2136333 | None:intergenic | 55.0% |
| GGTGGTCACTAATTGCTGGG+AGG | + | chr4_3:2136988-2137007 | Msa0624180:intron | 55.0% | |
| CTAATTGCTGGGAGGTTGCC+TGG | + | chr4_3:2136996-2137015 | Msa0624180:CDS | 55.0% | |
| ACTCACTTGAGGTGGGGTGG+GGG | + | chr4_3:2135730-2135749 | Msa0624180:CDS | 60.0% | |
| CAAGCGGCGTATCCCGTTGA+TGG | + | chr4_3:2136019-2136038 | Msa0624180:intron | 60.0% | |
| CCCCTCGTGATCCAACACCA+TGG | + | chr4_3:2136309-2136328 | Msa0624180:intron | 60.0% | |
| TGGGAGGTTGCCTGGACGTA+CGG | + | chr4_3:2137004-2137023 | Msa0624180:CDS | 60.0% | |
| ACTCACTTGAGGTGGGGTGG+GGG | + | chr4_3:2135730-2135749 | Msa0624180:CDS | 60.0% | |
| CAAGCGGCGTATCCCGTTGA+TGG | + | chr4_3:2136019-2136038 | Msa0624180:intron | 60.0% | |
| CCCCTCGTGATCCAACACCA+TGG | + | chr4_3:2136309-2136328 | Msa0624180:intron | 60.0% | |
| TGGGAGGTTGCCTGGACGTA+CGG | + | chr4_3:2137004-2137023 | Msa0624180:CDS | 60.0% | |
| ACTTGAGGTGGGGTGGGGGT+GGG | + | chr4_3:2135734-2135753 | Msa0624180:CDS | 65.0% | |
| TGGATCACGAGGGGGTTCGG+AGG | - | chr4_3:2136303-2136322 | None:intergenic | 65.0% | |
| ACTTGAGGTGGGGTGGGGGT+GGG | + | chr4_3:2135734-2135753 | Msa0624180:CDS | 65.0% | |
| TGGATCACGAGGGGGTTCGG+AGG | - | chr4_3:2136303-2136322 | None:intergenic | 65.0% | |
| CACTTGAGGTGGGGTGGGGG+TGG | + | chr4_3:2135733-2135752 | Msa0624180:CDS | 70.0% | |
| CTTGAGGTGGGGTGGGGGTG+GGG | + | chr4_3:2135735-2135754 | Msa0624180:CDS | 70.0% | |
| TTGAGGTGGGGTGGGGGTGG+GGG | + | chr4_3:2135736-2135755 | Msa0624180:CDS | 70.0% | |
| CACTTGAGGTGGGGTGGGGG+TGG | + | chr4_3:2135733-2135752 | Msa0624180:CDS | 70.0% | |
| CTTGAGGTGGGGTGGGGGTG+GGG | + | chr4_3:2135735-2135754 | Msa0624180:CDS | 70.0% | |
| TTGAGGTGGGGTGGGGGTGG+GGG | + | chr4_3:2135736-2135755 | Msa0624180:CDS | 70.0% | |
| TGAGGTGGGGTGGGGGTGGG+GGG | + | chr4_3:2135737-2135756 | Msa0624180:CDS | 75.0% | |
| GGGGGGTGGGAGGGGACAAG+AGG | + | chr4_3:2135754-2135773 | Msa0624180:CDS | 75.0% | |
| TGAGGTGGGGTGGGGGTGGG+GGG | + | chr4_3:2135737-2135756 | Msa0624180:CDS | 75.0% | |
| GGGGGGTGGGAGGGGACAAG+AGG | + | chr4_3:2135754-2135773 | Msa0624180:CDS | 75.0% | |
| ! | GTGGGGTGGGGGTGGGGGGT+GGG | + | chr4_3:2135741-2135760 | Msa0624180:CDS | 80.0% |
| ! | GGTGGGGGTGGGGGGTGGGA+GGG | + | chr4_3:2135745-2135764 | Msa0624180:CDS | 80.0% |
| ! | GTGGGGGTGGGGGGTGGGAG+GGG | + | chr4_3:2135746-2135765 | Msa0624180:CDS | 80.0% |
| ! | GTGGGGTGGGGGTGGGGGGT+GGG | + | chr4_3:2135741-2135760 | Msa0624180:CDS | 80.0% |
| ! | GGTGGGGGTGGGGGGTGGGA+GGG | + | chr4_3:2135745-2135764 | Msa0624180:CDS | 80.0% |
| ! | GTGGGGGTGGGGGGTGGGAG+GGG | + | chr4_3:2135746-2135765 | Msa0624180:CDS | 80.0% |
| ! | GGTGGGGTGGGGGTGGGGGG+TGG | + | chr4_3:2135740-2135759 | Msa0624180:CDS | 85.0% |
| ! | GGGTGGGGGTGGGGGGTGGG+AGG | + | chr4_3:2135744-2135763 | Msa0624180:CDS | 85.0% |
| ! | GGTGGGGTGGGGGTGGGGGG+TGG | + | chr4_3:2135740-2135759 | Msa0624180:CDS | 85.0% |
| ! | GGGTGGGGGTGGGGGGTGGG+AGG | + | chr4_3:2135744-2135763 | Msa0624180:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 2135594 | 2137307 | 2135594 | ID=Msa0624180;Name=Msa0624180 |
| chr4_3 | mRNA | 2135594 | 2137307 | 2135594 | ID=Msa0624180-mRNA-1;Parent=Msa0624180;Name=Msa0624180-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0|0|0.5|1|1|2|0|171 |
| chr4_3 | exon | 2135594 | 2135790 | 2135594 | ID=Msa0624180-mRNA-1:exon:527;Parent=Msa0624180-mRNA-1 |
| chr4_3 | exon | 2136989 | 2137307 | 2136989 | ID=Msa0624180-mRNA-1:exon:528;Parent=Msa0624180-mRNA-1 |
| chr4_3 | CDS | 2135594 | 2135790 | 2135594 | ID=Msa0624180-mRNA-1:cds;Parent=Msa0624180-mRNA-1 |
| chr4_3 | CDS | 2136989 | 2137307 | 2136989 | ID=Msa0624180-mRNA-1:cds;Parent=Msa0624180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
