Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0624200 | KEH19503.1 | 96.765 | 711 | 22 | 1 | 1 | 710 | 1 | 711 | 0.0 | 1419 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0624200 | sp|Q56XZ1|SHB_ARATH | 48.324 | 716 | 313 | 12 | 1 | 711 | 1 | 664 | 0.0 | 630 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0624200 | A0A072TRN9 | 96.765 | 711 | 22 | 1 | 1 | 710 | 1 | 711 | 0.0 | 1419 |
Gene ID | Type | Classification |
---|---|---|
Msa0624200 | TF | STAT |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0624200 | MtrunA17_Chr8g0359041 | 96.629 | 712 | 23 | 1 | 1 | 711 | 1 | 712 | 0.0 | 1398 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0624200 | AT1G78540.1 | 48.324 | 716 | 313 | 12 | 1 | 711 | 1 | 664 | 0.0 | 630 |
Msa0624200 | AT1G78540.2 | 48.392 | 715 | 312 | 12 | 1 | 710 | 1 | 663 | 0.0 | 630 |
Msa0624200 | AT1G17040.1 | 47.141 | 717 | 293 | 10 | 1 | 711 | 1 | 637 | 0.0 | 618 |
Msa0624200 | AT1G17040.2 | 46.630 | 727 | 292 | 11 | 1 | 711 | 1 | 647 | 0.0 | 610 |
Msa0624200 | AT1G78540.3 | 47.453 | 687 | 304 | 12 | 1 | 682 | 1 | 635 | 0.0 | 592 |
Msa0624200 | AT1G17040.3 | 46.366 | 688 | 283 | 10 | 1 | 682 | 1 | 608 | 0.0 | 582 |
Find 205 sgRNAs with CRISPR-Local
Find 970 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAACTTTCTCTTTCTGCTTT+TGG | 0.137670 | 4_3:+2176223 | Msa0624200:CDS |
AAAGGATAATCTCCTAATTT+TGG | 0.151104 | 4_3:-2181383 | None:intergenic |
GTCACACAATTCACCGATTT+TGG | 0.166300 | 4_3:+2176098 | Msa0624200:five_prime_UTR |
ATCTCTTGGAAATTAATATT+TGG | 0.178295 | 4_3:-2187631 | None:intergenic |
TTCTACCCCAGATTGCTTTA+TGG | 0.181537 | 4_3:-2181648 | None:intergenic |
TATCAAAGATCATCATTTAA+AGG | 0.184938 | 4_3:+2178708 | Msa0624200:CDS |
TATATTCGGCTTCACATTAA+TGG | 0.190807 | 4_3:+2178532 | Msa0624200:CDS |
GCAACTTTGACTGGAAATTA+AGG | 0.205491 | 4_3:-2189852 | None:intergenic |
ATGTGAAGCCGAATATAATT+TGG | 0.226222 | 4_3:-2178526 | None:intergenic |
TTCCTTCAAATTACTTGAAT+TGG | 0.227549 | 4_3:-2178602 | None:intergenic |
ATGAATCCTTCAATCCATTT+AGG | 0.246881 | 4_3:-2188589 | None:intergenic |
ATTGGATTCCTTATGTAATA+AGG | 0.269045 | 4_3:-2178584 | None:intergenic |
CAAGGAATGGGGTGGTTGTT+TGG | 0.283394 | 4_3:-2187692 | None:intergenic |
CTTTCAATGGATCATATATA+CGG | 0.288269 | 4_3:+2188775 | Msa0624200:CDS |
GGAATTCCATGTCACCTAAA+TGG | 0.294593 | 4_3:+2188575 | Msa0624200:CDS |
TTCTTCTTCAACCTCAGATA+TGG | 0.297680 | 4_3:-2178904 | None:intergenic |
ATATTCGGCTTCACATTAAT+GGG | 0.313116 | 4_3:+2178533 | Msa0624200:CDS |
ACAATTAGGCAACCGGCATC+TGG | 0.320701 | 4_3:-2188712 | None:intergenic |
CACAAAGGAGGATGGGTTCT+AGG | 0.322387 | 4_3:+2189900 | Msa0624200:CDS |
GATGGTGTTTGGGGCATTGT+TGG | 0.327498 | 4_3:+2178930 | Msa0624200:CDS |
AGGTTTGTCCAAATTATATT+CGG | 0.332939 | 4_3:+2178518 | Msa0624200:intron |
GTGGGGCCAGCTTCTTGAGG+TGG | 0.338393 | 4_3:-2188689 | None:intergenic |
TAGAAGATGGAACTAATCTT+TGG | 0.341777 | 4_3:+2187657 | Msa0624200:CDS |
TGCCTAATTGTTACATATGT+TGG | 0.346266 | 4_3:+2188724 | Msa0624200:CDS |
AAAGTTGCCTAGGTTGTATT+GGG | 0.350465 | 4_3:+2189867 | Msa0624200:CDS |
TCATGTATGGACTGCTAATC+AGG | 0.353019 | 4_3:+2181682 | Msa0624200:CDS |
CTACTTTCCATGCTATTTGA+AGG | 0.360932 | 4_3:-2184933 | None:intergenic |
CTGTTACTTGCATGGGTCCT+TGG | 0.362933 | 4_3:+2177749 | Msa0624200:CDS |
CTCCTTGTTTGCGCTGAAAC+CGG | 0.364213 | 4_3:-2175993 | None:intergenic |
TCCCAACATATGTAACAATT+AGG | 0.370251 | 4_3:-2188726 | None:intergenic |
CCCTACCACCATTCTTCATC+AGG | 0.370260 | 4_3:+2176272 | Msa0624200:CDS |
TGCCAGACAGTATTTGAAAA+TGG | 0.371618 | 4_3:-2184979 | None:intergenic |
CACATTAATGGGGAGATTGT+AGG | 0.372402 | 4_3:+2178544 | Msa0624200:CDS |
AGAAGAAAGTGATGGTGTTT+GGG | 0.375693 | 4_3:+2178920 | Msa0624200:CDS |
CAAAGTTGCCTAGGTTGTAT+TGG | 0.375869 | 4_3:+2189866 | Msa0624200:CDS |
GCCTAATTGTTACATATGTT+GGG | 0.381610 | 4_3:+2188725 | Msa0624200:CDS |
ACAACCTAGGCAACTTTGAC+TGG | 0.384850 | 4_3:-2189861 | None:intergenic |
AACCCCACCATAAAGCAATC+TGG | 0.385813 | 4_3:+2181641 | Msa0624200:CDS |
CAAGGACCCATGCAAGTAAC+AGG | 0.387372 | 4_3:-2177748 | None:intergenic |
AAGAAGAAAGTGATGGTGTT+TGG | 0.389600 | 4_3:+2178919 | Msa0624200:CDS |
GGGACTGGGTAAATGCTATC+TGG | 0.392153 | 4_3:+2188554 | Msa0624200:CDS |
CAACTTTGACTGGAAATTAA+GGG | 0.393221 | 4_3:-2189851 | None:intergenic |
TCCATCTTCTATCAATCTCT+TGG | 0.394660 | 4_3:-2187645 | None:intergenic |
CAAATACTGTCTGGCAGGCT+TGG | 0.395074 | 4_3:+2184986 | Msa0624200:CDS |
GAACCTGAGCTGTCCCGTTT+GGG | 0.400255 | 4_3:+2189684 | Msa0624200:CDS |
TCCAAGAGATTGATAGAAGA+TGG | 0.402990 | 4_3:+2187644 | Msa0624200:CDS |
TAAGCTGAAAGATTTATGTT+TGG | 0.403034 | 4_3:+2176182 | Msa0624200:CDS |
TAGAGAACTTTGAGAAGTTA+TGG | 0.403203 | 4_3:+2188497 | Msa0624200:CDS |
TAATTTGAAGGAAATACATT+TGG | 0.404039 | 4_3:+2178612 | Msa0624200:CDS |
AGAACCTGAGCTGTCCCGTT+TGG | 0.407753 | 4_3:+2189683 | Msa0624200:CDS |
AACGAGAAAAGGAGCACTTT+CGG | 0.410857 | 4_3:-2177668 | None:intergenic |
TGGGGCCAGCTTCTTGAGGT+GGG | 0.411262 | 4_3:-2188688 | None:intergenic |
ATTTGGACAGCCTGTTGATA+TGG | 0.412767 | 4_3:+2179492 | Msa0624200:CDS |
GAGATTCTAAGAAGCATTGC+GGG | 0.414323 | 4_3:+2188454 | Msa0624200:CDS |
TCGCCACAAACTACTTTCAA+TGG | 0.414819 | 4_3:+2188762 | Msa0624200:CDS |
AGATTGCTTTATGGTGGGGT+TGG | 0.415607 | 4_3:-2181639 | None:intergenic |
ACTGTCTTCCTTATTACATA+AGG | 0.420661 | 4_3:+2178576 | Msa0624200:CDS |
ACCTCATTCTCCATATCAAC+AGG | 0.425279 | 4_3:-2179502 | None:intergenic |
AATGTAATAATTCTCATGTA+TGG | 0.426139 | 4_3:+2181669 | Msa0624200:CDS |
TCATGAAGATTGCTTCTTGT+GGG | 0.429431 | 4_3:+2187747 | Msa0624200:CDS |
CAAACAACCACCCCATTCCT+TGG | 0.429564 | 4_3:+2187693 | Msa0624200:CDS |
GTCCGATTCGATGCATCTCC+AGG | 0.430659 | 4_3:+2181423 | Msa0624200:CDS |
GTCAAGATCTCTCTCTCATC+AGG | 0.431837 | 4_3:+2187769 | Msa0624200:CDS |
ATATAAAATTAGGTTGAGAA+TGG | 0.431848 | 4_3:+2184816 | Msa0624200:intron |
ATACATTTGGCCAACCTTTG+TGG | 0.433609 | 4_3:+2178625 | Msa0624200:CDS |
TTCCATCATAGCTAGACAAA+AGG | 0.435470 | 4_3:-2179694 | None:intergenic |
AGTTGAAACCAAACCAAAAT+CGG | 0.435932 | 4_3:-2176111 | None:intergenic |
ACCCCAGATTGCTTTATGGT+GGG | 0.435953 | 4_3:-2181644 | None:intergenic |
ACTGCGCTCTTCCAAGGAAT+GGG | 0.437559 | 4_3:-2187704 | None:intergenic |
CAAGATATCTGTATCAGTTA+AGG | 0.438887 | 4_3:+2181616 | Msa0624200:CDS |
AGCAATTGATGATGTGTCAT+TGG | 0.443673 | 4_3:+2181526 | Msa0624200:CDS |
GGTGTTTGGGGCATTGTTGG+TGG | 0.445924 | 4_3:+2178933 | Msa0624200:CDS |
AGACAAAGAAATTTCAGAGT+TGG | 0.446109 | 4_3:+2185052 | Msa0624200:CDS |
TGAAGCTTCTGCCTCCTCCT+TGG | 0.447893 | 4_3:-2188614 | None:intergenic |
TATAAAATTAGGTTGAGAAT+GGG | 0.447911 | 4_3:+2184817 | Msa0624200:intron |
CTGTAGCGTGTGTAATATCC+AGG | 0.453605 | 4_3:+2188533 | Msa0624200:CDS |
GAGGCAGAAGCTTCACTTCA+AGG | 0.453781 | 4_3:+2188622 | Msa0624200:CDS |
GGGGCCAGCTTCTTGAGGTG+GGG | 0.454316 | 4_3:-2188687 | None:intergenic |
GTTTGTTAAGAGTAACGGTT+TGG | 0.454333 | 4_3:-2176034 | None:intergenic |
CCCCAGATTGCTTTATGGTG+GGG | 0.459838 | 4_3:-2181643 | None:intergenic |
TCATTGGAAAGTATGAATTC+TGG | 0.460754 | 4_3:+2181542 | Msa0624200:CDS |
CTGGATATTACACACGCTAC+AGG | 0.462387 | 4_3:-2188532 | None:intergenic |
ATCCAATTCAAGTAATTTGA+AGG | 0.462536 | 4_3:+2178600 | Msa0624200:CDS |
TGGAGACAGTAGTGGTGTGC+AGG | 0.464205 | 4_3:+2178645 | Msa0624200:CDS |
CACTGCGCTCTTCCAAGGAA+TGG | 0.469423 | 4_3:-2187705 | None:intergenic |
TTGGAAGAGCGCAGTGTATG+AGG | 0.470136 | 4_3:+2187712 | Msa0624200:CDS |
ATATGTAACAATTAGGCAAC+CGG | 0.470781 | 4_3:-2188719 | None:intergenic |
TCCATCATAGCTAGACAAAA+GGG | 0.472581 | 4_3:-2179693 | None:intergenic |
AAGTAGAAGATATCAAATAT+CGG | 0.473248 | 4_3:+2184950 | Msa0624200:CDS |
TAGGCAACCGGCATCTGGGT+GGG | 0.474931 | 4_3:-2188707 | None:intergenic |
ATTGTGTGACTTTGTGTTGA+CGG | 0.476877 | 4_3:-2176085 | None:intergenic |
AGCTGGCCCCACCCAGATGC+CGG | 0.477204 | 4_3:+2188700 | Msa0624200:CDS |
ATGTCACCTAAATGGATTGA+AGG | 0.477650 | 4_3:+2188583 | Msa0624200:CDS |
ACCCCACCATAAAGCAATCT+GGG | 0.481499 | 4_3:+2181642 | Msa0624200:CDS |
TATATCTTACCTTCCCAAAC+GGG | 0.481733 | 4_3:-2189697 | None:intergenic |
TACCCCAGATTGCTTTATGG+TGG | 0.481887 | 4_3:-2181645 | None:intergenic |
AAACCTCTTCATCAGTGGGT+TGG | 0.490109 | 4_3:-2181579 | None:intergenic |
GCCTGTTGATATGGAGAATG+AGG | 0.491700 | 4_3:+2179501 | Msa0624200:CDS |
TTCACTTGTGTATGCTGACA+CGG | 0.492848 | 4_3:+2179634 | Msa0624200:CDS |
TCTTCATGTAAGTAAAGAAC+TGG | 0.493153 | 4_3:-2177721 | None:intergenic |
TTCTTTGTCTGAAGCAGAGA+TGG | 0.494049 | 4_3:-2185039 | None:intergenic |
GATCCATTGAAAGTAGTTTG+TGG | 0.495131 | 4_3:-2188765 | None:intergenic |
ATATATCTTACCTTCCCAAA+CGG | 0.496846 | 4_3:-2189698 | None:intergenic |
AGGCAACCGGCATCTGGGTG+GGG | 0.497592 | 4_3:-2188706 | None:intergenic |
CGTGTGTAATATCCAGGGAC+TGG | 0.499294 | 4_3:+2188539 | Msa0624200:CDS |
TTCAATCCATTTAGGTGACA+TGG | 0.504658 | 4_3:-2188581 | None:intergenic |
GAAGCTTCACTTCAAGGTCC+AGG | 0.505329 | 4_3:+2188628 | Msa0624200:CDS |
TTCATGAAGATTGCTTCTTG+TGG | 0.506672 | 4_3:+2187746 | Msa0624200:CDS |
TGGCACAGGCATCTTGTCGC+AGG | 0.510165 | 4_3:+2179437 | Msa0624200:intron |
TATAGATTCACAAAGGAGGA+TGG | 0.510328 | 4_3:+2189892 | Msa0624200:CDS |
CTTCCCAAACGGGACAGCTC+AGG | 0.511754 | 4_3:-2189687 | None:intergenic |
TTATTGTTGATAACGAGAAA+AGG | 0.512110 | 4_3:-2177679 | None:intergenic |
CTGAATCATCAGAGAGTACA+GGG | 0.512336 | 4_3:+2184898 | Msa0624200:CDS |
TGGGTGGGGCCAGCTTCTTG+AGG | 0.513111 | 4_3:-2188692 | None:intergenic |
ATTTCCAGTCAAAGTTGCCT+AGG | 0.513810 | 4_3:+2189857 | Msa0624200:CDS |
GAAGCTCCTGTTACTTGCAT+GGG | 0.514189 | 4_3:+2177742 | Msa0624200:CDS |
TCATCAGTTGTATTCTCGAC+TGG | 0.514337 | 4_3:-2179662 | None:intergenic |
GTCGTGCATCATTTAAGCTC+AGG | 0.517134 | 4_3:+2179759 | Msa0624200:CDS |
GGTTCCCCACCTCAAGAAGC+TGG | 0.518481 | 4_3:+2188683 | Msa0624200:CDS |
AGATGGAACTAATCTTTGGC+TGG | 0.521756 | 4_3:+2187661 | Msa0624200:CDS |
ATTTAAGCTCAGGATATCTC+AGG | 0.523956 | 4_3:+2179769 | Msa0624200:CDS |
CAAAATTATCCACGCTGGTG+TGG | 0.527759 | 4_3:+2181456 | Msa0624200:CDS |
CCACGTTCTTGAAATCCTCC+TGG | 0.528277 | 4_3:-2188646 | None:intergenic |
AAACCAACCCACTGATGAAG+AGG | 0.534477 | 4_3:+2181576 | Msa0624200:CDS |
TCATACACTGCGCTCTTCCA+AGG | 0.536339 | 4_3:-2187710 | None:intergenic |
TTTCATCCAAGTGTGATAGC+AGG | 0.537892 | 4_3:+2181336 | Msa0624200:CDS |
TCTGAATCATCAGAGAGTAC+AGG | 0.539016 | 4_3:+2184897 | Msa0624200:CDS |
CAATTAGGCAACCGGCATCT+GGG | 0.539070 | 4_3:-2188711 | None:intergenic |
GCCAGTAGCATATCTTGCAA+TGG | 0.540447 | 4_3:-2189660 | None:intergenic |
ACCATTGCAAGATATGCTAC+TGG | 0.540687 | 4_3:+2189659 | Msa0624200:CDS |
CTCCTGGAGATGCATCGAAT+CGG | 0.542203 | 4_3:-2181425 | None:intergenic |
TGTTTGTTTGTTAAGAGTAA+CGG | 0.542228 | 4_3:-2176039 | None:intergenic |
ACTTTGAGAAGTTATGGTGC+TGG | 0.543644 | 4_3:+2188503 | Msa0624200:CDS |
CGGGTGTTTGTCTGAAGGAA+AGG | 0.544681 | 4_3:-2181401 | None:intergenic |
GTCCGGTTTCAGCGCAAACA+AGG | 0.547282 | 4_3:+2175991 | Msa0624200:five_prime_UTR |
AGAAGCTCCTGTTACTTGCA+TGG | 0.548585 | 4_3:+2177741 | Msa0624200:CDS |
AAGAATGGTGGTAGGGAATG+TGG | 0.550704 | 4_3:-2176265 | None:intergenic |
CCTGATGAAGAATGGTGGTA+GGG | 0.551662 | 4_3:-2176272 | None:intergenic |
GATAGCATTTACCCAGTCCC+TGG | 0.552763 | 4_3:-2188551 | None:intergenic |
CTTCTTCAAAGTTAAGAGAT+CGG | 0.555555 | 4_3:-2184860 | None:intergenic |
TCACTTGTGTATGCTGACAC+GGG | 0.556831 | 4_3:+2179635 | Msa0624200:CDS |
TTTCAGGATGTTCCCACCAC+AGG | 0.559339 | 4_3:+2185093 | Msa0624200:CDS |
ATGATTAACCTGATGAAGAA+TGG | 0.560257 | 4_3:-2176280 | None:intergenic |
CTCTAAACCTCTTCATCAGT+GGG | 0.562428 | 4_3:-2181583 | None:intergenic |
GGTTACGTGTACAATTATGA+AGG | 0.562441 | 4_3:+2178667 | Msa0624200:CDS |
GTTTCAACTTGACACAGTGA+TGG | 0.562599 | 4_3:+2176125 | Msa0624200:exon |
GAACAACCTGCTATCACACT+TGG | 0.566917 | 4_3:-2181342 | None:intergenic |
AAATTCACCTTCAAATAGCA+TGG | 0.570364 | 4_3:+2184926 | Msa0624200:CDS |
ACTACTGTCTCCACAAAGGT+TGG | 0.570979 | 4_3:-2178635 | None:intergenic |
ATAGATTCACAAAGGAGGAT+GGG | 0.571702 | 4_3:+2189893 | Msa0624200:CDS |
AGGATTCATCACCAAGGAGG+AGG | 0.573700 | 4_3:+2188603 | Msa0624200:CDS |
TTTCAATGGATCATATATAC+GGG | 0.575038 | 4_3:+2188776 | Msa0624200:CDS |
CTATAATCCCAATACAACCT+AGG | 0.575600 | 4_3:-2189874 | None:intergenic |
GTACTCTCTGATGATTCAGA+TGG | 0.580613 | 4_3:-2184894 | None:intergenic |
CGCTCTTCCAAGGAATGGGG+TGG | 0.581585 | 4_3:-2187700 | None:intergenic |
TTTCAACTTGACACAGTGAT+GGG | 0.581961 | 4_3:+2176126 | Msa0624200:exon |
GTGTGTAATATCCAGGGACT+GGG | 0.582085 | 4_3:+2188540 | Msa0624200:CDS |
TCATCTATTGATAACTTCAG+AGG | 0.582464 | 4_3:-2178876 | None:intergenic |
TTAGGCAACCGGCATCTGGG+TGG | 0.584004 | 4_3:-2188708 | None:intergenic |
TGGAGATGCATCGAATCGGA+CGG | 0.584719 | 4_3:-2181421 | None:intergenic |
TCTATTGATAACTTCAGAGG+AGG | 0.585690 | 4_3:-2178873 | None:intergenic |
ACCTGATGAAGAATGGTGGT+AGG | 0.586031 | 4_3:-2176273 | None:intergenic |
CTGATGAAGAGGTTTAGAGT+TGG | 0.586232 | 4_3:+2181587 | Msa0624200:CDS |
GGAGATGCATCGAATCGGAC+GGG | 0.587647 | 4_3:-2181420 | None:intergenic |
GATGAAATGAGAAGAAACGA+AGG | 0.596652 | 4_3:+2176153 | Msa0624200:CDS |
CTGAGCTGTCCCGTTTGGGA+AGG | 0.597914 | 4_3:+2189688 | Msa0624200:CDS |
CACTTGTGTATGCTGACACG+GGG | 0.600002 | 4_3:+2179636 | Msa0624200:CDS |
TTGGAACACAAAATCTGATG+AGG | 0.600332 | 4_3:-2181364 | None:intergenic |
TTGTTTGCGCTGAAACCGGA+CGG | 0.601838 | 4_3:-2175989 | None:intergenic |
TCGGACGGGTGTTTGTCTGA+AGG | 0.602563 | 4_3:-2181406 | None:intergenic |
TGGATATTACACACGCTACA+GGG | 0.607476 | 4_3:-2188531 | None:intergenic |
CAATGCTTCTTAGAATCTCA+AGG | 0.610813 | 4_3:-2188450 | None:intergenic |
CTATTGATAACTTCAGAGGA+GGG | 0.614350 | 4_3:-2178872 | None:intergenic |
ACATGTGGAACTTCTGTCCA+AGG | 0.615922 | 4_3:-2177766 | None:intergenic |
GCGCAAACAAGGAGGGAGGG+AGG | 0.616051 | 4_3:+2176002 | Msa0624200:five_prime_UTR |
TATTCGGCTTCACATTAATG+GGG | 0.619662 | 4_3:+2178534 | Msa0624200:CDS |
ACTCTAAACCTCTTCATCAG+TGG | 0.621417 | 4_3:-2181584 | None:intergenic |
ATGGGTTCATGTTGGATGTG+AGG | 0.626398 | 4_3:+2177819 | Msa0624200:CDS |
TCAAAATCAACAGTAACATG+TGG | 0.626757 | 4_3:-2177781 | None:intergenic |
TTCAGCGCAAACAAGGAGGG+AGG | 0.628576 | 4_3:+2175998 | Msa0624200:five_prime_UTR |
TGAGATTCTAAGAAGCATTG+CGG | 0.636449 | 4_3:+2188453 | Msa0624200:CDS |
AGATGAATCATCCATATCTG+AGG | 0.644094 | 4_3:+2178893 | Msa0624200:CDS |
AACCTTTGTGGAGACAGTAG+TGG | 0.645377 | 4_3:+2178637 | Msa0624200:CDS |
GGTTTCAGCGCAAACAAGGA+GGG | 0.649536 | 4_3:+2175995 | Msa0624200:five_prime_UTR |
CCAGGAGGATTTCAAGAACG+TGG | 0.650281 | 4_3:+2188646 | Msa0624200:CDS |
CGGTTTCAGCGCAAACAAGG+AGG | 0.650936 | 4_3:+2175994 | Msa0624200:five_prime_UTR |
GGATTATAGATTCACAAAGG+AGG | 0.651553 | 4_3:+2189888 | Msa0624200:CDS |
CTGCGCTCTTCCAAGGAATG+GGG | 0.656673 | 4_3:-2187703 | None:intergenic |
TCAGCGCAAACAAGGAGGGA+GGG | 0.659172 | 4_3:+2175999 | Msa0624200:five_prime_UTR |
ATGAAATGAGAAGAAACGAA+GGG | 0.660758 | 4_3:+2176154 | Msa0624200:CDS |
CACCACTACTGTCTCCACAA+AGG | 0.671743 | 4_3:-2178639 | None:intergenic |
TTGGGATTATAGATTCACAA+AGG | 0.671769 | 4_3:+2189885 | Msa0624200:CDS |
GGAGACAGTAGTGGTGTGCA+GGG | 0.672818 | 4_3:+2178646 | Msa0624200:CDS |
GAAGAAAGTGATGGTGTTTG+GGG | 0.673785 | 4_3:+2178921 | Msa0624200:CDS |
CCATCATAGCTAGACAAAAG+GGG | 0.681924 | 4_3:-2179692 | None:intergenic |
CCCCACCATAAAGCAATCTG+GGG | 0.685299 | 4_3:+2181643 | Msa0624200:CDS |
GAGGTTGAAGAAGAAAGTGA+TGG | 0.685547 | 4_3:+2178912 | Msa0624200:CDS |
TGTAGCGTGTGTAATATCCA+GGG | 0.688612 | 4_3:+2188534 | Msa0624200:CDS |
TAACACAAAATTATCCACGC+TGG | 0.694520 | 4_3:+2181451 | Msa0624200:CDS |
GCTTCACTTCAAGGTCCAGG+AGG | 0.697928 | 4_3:+2188631 | Msa0624200:CDS |
ACTTGTGTATGCTGACACGG+GGG | 0.701144 | 4_3:+2179637 | Msa0624200:CDS |
TGAAGGATTCATCACCAAGG+AGG | 0.729057 | 4_3:+2188600 | Msa0624200:CDS |
ATTAACCTGATGAAGAATGG+TGG | 0.731909 | 4_3:-2176277 | None:intergenic |
GATTGAAGGATTCATCACCA+AGG | 0.751713 | 4_3:+2188597 | Msa0624200:CDS |
TGAATCATCAGAGAGTACAG+GGG | 0.779447 | 4_3:+2184899 | Msa0624200:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTTAAAAAATTAATAAT+TGG | - | chr4_3:2183793-2183812 | None:intergenic | 0.0% |
!! | AAAAAATTTGAAAAGAAAAA+AGG | - | chr4_3:2178459-2178478 | None:intergenic | 10.0% |
!!! | TTTTCTTTTCAAATTTTTTA+TGG | + | chr4_3:2178460-2178479 | Msa0624200:intron | 10.0% |
!!! | TTTCTTTTCAAATTTTTTAT+GGG | + | chr4_3:2178461-2178480 | Msa0624200:intron | 10.0% |
!! | TTAATATCAAAGATTAAAAA+AGG | + | chr4_3:2180267-2180286 | Msa0624200:intron | 10.0% |
!! | TATTAAATATATGGAAATTA+GGG | - | chr4_3:2181035-2181054 | None:intergenic | 10.0% |
!! | ATATTAAATATATGGAAATT+AGG | - | chr4_3:2181036-2181055 | None:intergenic | 10.0% |
!! | AAAAATAAATAAAATAAACC+AGG | - | chr4_3:2181225-2181244 | None:intergenic | 10.0% |
!!! | TATGAATATTATTTTTAACA+CGG | + | chr4_3:2181833-2181852 | Msa0624200:intron | 10.0% |
!!! | TTTTTAATTCTTTTAACAAA+AGG | - | chr4_3:2183751-2183770 | None:intergenic | 10.0% |
!!! | ATGTTTTTTTTTATTACAAT+TGG | + | chr4_3:2184168-2184187 | Msa0624200:intron | 10.0% |
!! | ACAATAACAAATAAAATATA+TGG | - | chr4_3:2185412-2185431 | None:intergenic | 10.0% |
!!! | ATTTAAGTTTATTTATGATA+AGG | - | chr4_3:2187350-2187369 | None:intergenic | 10.0% |
!!! | TTTTTAAAATTCTCTTATAG+AGG | + | chr4_3:2176535-2176554 | Msa0624200:intron | 15.0% |
!! | CATAAAAATTCATAATAACT+CGG | - | chr4_3:2177162-2177181 | None:intergenic | 15.0% |
!! | TTTATGTTTAGAGATTTAAT+AGG | + | chr4_3:2177176-2177195 | Msa0624200:intron | 15.0% |
!!! | ATTAATTTAGCTGATTTTTT+TGG | + | chr4_3:2177199-2177218 | Msa0624200:intron | 15.0% |
!!! | TTAATTTAGCTGATTTTTTT+GGG | + | chr4_3:2177200-2177219 | Msa0624200:intron | 15.0% |
!! | AAAAATAACAATAGTATCTA+TGG | - | chr4_3:2177283-2177302 | None:intergenic | 15.0% |
!!! | TTTATATGTTTCTTTGTTTA+TGG | + | chr4_3:2177881-2177900 | Msa0624200:intron | 15.0% |
!! | TAGTAATAAACAATATCTAT+AGG | - | chr4_3:2177942-2177961 | None:intergenic | 15.0% |
!! | AAGTAAGTAGTATTAATTAT+GGG | - | chr4_3:2178069-2178088 | None:intergenic | 15.0% |
!! | TAAGTAAGTAGTATTAATTA+TGG | - | chr4_3:2178070-2178089 | None:intergenic | 15.0% |
!! | TCAAATATATTAAGAAATGT+AGG | - | chr4_3:2178190-2178209 | None:intergenic | 15.0% |
!! | AAAAGAATAAAAATGCATTA+TGG | - | chr4_3:2178269-2178288 | None:intergenic | 15.0% |
!!! | TTTTTAATCCCTTATATATA+GGG | - | chr4_3:2179163-2179182 | None:intergenic | 15.0% |
!!! | AAAAGAAATTTATTTTTGCT+AGG | - | chr4_3:2180695-2180714 | None:intergenic | 15.0% |
!! | TATCATAAAGAAATAGTTAA+AGG | - | chr4_3:2184786-2184805 | None:intergenic | 15.0% |
!! | ACAAATACAGATAAAATTTA+GGG | - | chr4_3:2186434-2186453 | None:intergenic | 15.0% |
!! | AACAAATACAGATAAAATTT+AGG | - | chr4_3:2186435-2186454 | None:intergenic | 15.0% |
!! | TACAACTACTTTAATAAATA+AGG | - | chr4_3:2187944-2187963 | None:intergenic | 15.0% |
!! | ACATTTAATTGTTTATAACT+TGG | + | chr4_3:2188134-2188153 | Msa0624200:intron | 15.0% |
!! | CATTTAATTGTTTATAACTT+GGG | + | chr4_3:2188135-2188154 | Msa0624200:intron | 15.0% |
!!! | AAAGTTCATTATTTTAGTAA+TGG | + | chr4_3:2188419-2188438 | Msa0624200:intron | 15.0% |
!!! | CAAACAACTATTTTGTTTTA+GGG | + | chr4_3:2176561-2176580 | Msa0624200:intron | 20.0% |
!! | AGATAGAAATATAATAGCAA+AGG | - | chr4_3:2177356-2177375 | None:intergenic | 20.0% |
!!! | AGCTTGCTAAATAAATTAAT+TGG | + | chr4_3:2177621-2177640 | Msa0624200:intron | 20.0% |
!!! | GCTTGCTAAATAAATTAATT+GGG | + | chr4_3:2177622-2177641 | Msa0624200:intron | 20.0% |
!!! | TTTAAAAGGTGCTTATAAAT+AGG | + | chr4_3:2178214-2178233 | Msa0624200:intron | 20.0% |
!!! | TTAAAAGGTGCTTATAAATA+GGG | + | chr4_3:2178215-2178234 | Msa0624200:intron | 20.0% |
!! | ATTTGAAAAGAAAAAAGGAA+TGG | - | chr4_3:2178454-2178473 | None:intergenic | 20.0% |
!! | TAATTTGAAGGAAATACATT+TGG | + | chr4_3:2178612-2178631 | Msa0624200:CDS | 20.0% |
!! | TATCAAAGATCATCATTTAA+AGG | + | chr4_3:2178708-2178727 | Msa0624200:CDS | 20.0% |
!!! | CTTTTTAATCCCTTATATAT+AGG | - | chr4_3:2179164-2179183 | None:intergenic | 20.0% |
!!! | AATGTTCTCTGTTTTTTTTT+TGG | + | chr4_3:2179226-2179245 | Msa0624200:intron | 20.0% |
!! | AAAATATAGCTTAAATGAGA+TGG | - | chr4_3:2179396-2179415 | None:intergenic | 20.0% |
!! | TGAATAATTATCAGATATTG+TGG | - | chr4_3:2179832-2179851 | None:intergenic | 20.0% |
!! | AAAGATTAAAAAAGGAAATC+AGG | + | chr4_3:2180275-2180294 | Msa0624200:intron | 20.0% |
!!! | TAATAAAAGTGTTGTTTCTT+TGG | - | chr4_3:2180834-2180853 | None:intergenic | 20.0% |
!!! | CAACACTTTTATTAAGAAAT+AGG | + | chr4_3:2180840-2180859 | Msa0624200:intron | 20.0% |
!!! | AAGTTAGTTAGTTTGTTATT+TGG | - | chr4_3:2180984-2181003 | None:intergenic | 20.0% |
!! | GTGTTAGGATATTAAATATA+TGG | - | chr4_3:2181044-2181063 | None:intergenic | 20.0% |
!!! | CAAATTTTGGTCTAAATTTT+TGG | + | chr4_3:2181251-2181270 | Msa0624200:intron | 20.0% |
!! | AATGTAATAATTCTCATGTA+TGG | + | chr4_3:2181669-2181688 | Msa0624200:CDS | 20.0% |
!! | TTAAAGAAAAAACCATTCAT+AGG | - | chr4_3:2182181-2182200 | None:intergenic | 20.0% |
!! | AATAGTTAAATCTTTACACA+AGG | - | chr4_3:2182253-2182272 | None:intergenic | 20.0% |
!! | TGTGTAAAGATTTAACTATT+AGG | + | chr4_3:2182253-2182272 | Msa0624200:intron | 20.0% |
!! | ATTTAACTATTAGGAAAGTA+AGG | + | chr4_3:2182262-2182281 | Msa0624200:intron | 20.0% |
!! | AATAGTTAAATCTTTACACA+AGG | - | chr4_3:2182253-2182272 | None:intergenic | 20.0% |
!! | TGTGTAAAGATTTAACTATT+AGG | + | chr4_3:2182253-2182272 | Msa0624200:intron | 20.0% |
!! | ATTTAACTATTAGGAAAGTA+AGG | + | chr4_3:2182262-2182281 | Msa0624200:intron | 20.0% |
!! | AATAGTTAAATCTTTACACA+AGG | - | chr4_3:2182253-2182272 | None:intergenic | 20.0% |
!! | TGTGTAAAGATTTAACTATT+AGG | + | chr4_3:2182253-2182272 | Msa0624200:intron | 20.0% |
!! | ATTTAACTATTAGGAAAGTA+AGG | + | chr4_3:2182262-2182281 | Msa0624200:intron | 20.0% |
!! | TCAATAATCATTATATGTAG+TGG | + | chr4_3:2183957-2183976 | Msa0624200:intron | 20.0% |
!! | CAATAATCATTATATGTAGT+GGG | + | chr4_3:2183958-2183977 | Msa0624200:intron | 20.0% |
!! | AATAATCATTATATGTAGTG+GGG | + | chr4_3:2183959-2183978 | Msa0624200:intron | 20.0% |
!!! | AACCATTACATCTTTAAAAA+TGG | + | chr4_3:2184264-2184283 | Msa0624200:intron | 20.0% |
!!! | ACCATTACATCTTTAAAAAT+GGG | + | chr4_3:2184265-2184284 | Msa0624200:intron | 20.0% |
!! | AACAAATGTAAGTCAAAAAA+TGG | - | chr4_3:2184549-2184568 | None:intergenic | 20.0% |
!!! | ATTTTTTGACTTACATTTGT+TGG | + | chr4_3:2184548-2184567 | Msa0624200:intron | 20.0% |
!!! | ATATAAAATTAGGTTGAGAA+TGG | + | chr4_3:2184816-2184835 | Msa0624200:intron | 20.0% |
!!! | TATAAAATTAGGTTGAGAAT+GGG | + | chr4_3:2184817-2184836 | Msa0624200:intron | 20.0% |
!! | AAGTAGAAGATATCAAATAT+CGG | + | chr4_3:2184950-2184969 | Msa0624200:CDS | 20.0% |
!! | TTCTTATCTGTATGTATATT+AGG | + | chr4_3:2185327-2185346 | Msa0624200:intron | 20.0% |
!! | TCATAATCATTCTTGATATT+AGG | + | chr4_3:2185530-2185549 | Msa0624200:intron | 20.0% |
!! | CATAATCATTCTTGATATTA+GGG | + | chr4_3:2185531-2185550 | Msa0624200:intron | 20.0% |
!! | ACAAAAAATGTGTATATAAG+TGG | - | chr4_3:2185804-2185823 | None:intergenic | 20.0% |
!! | CAAATACAGATAAAATTTAG+GGG | - | chr4_3:2186433-2186452 | None:intergenic | 20.0% |
!! | GTTAATTATATGAATGAAAC+TGG | - | chr4_3:2187548-2187567 | None:intergenic | 20.0% |
!! | ATCTCTTGGAAATTAATATT+TGG | - | chr4_3:2187634-2187653 | None:intergenic | 20.0% |
!! | AAAAGAAACAACAAAGAAAT+CGG | - | chr4_3:2187796-2187815 | None:intergenic | 20.0% |
!!! | TTTCTTTGTTGTTTCTTTTA+AGG | + | chr4_3:2187797-2187816 | Msa0624200:intron | 20.0% |
!! | TTAATAAATAAGGATAGCAT+TGG | - | chr4_3:2187934-2187953 | None:intergenic | 20.0% |
!! | CAAATAATAAATGAAGTACA+AGG | + | chr4_3:2187977-2187996 | Msa0624200:intron | 20.0% |
!!! | GTCTAACATATTATTTTCAT+TGG | + | chr4_3:2188010-2188029 | Msa0624200:intron | 20.0% |
!! | TATAAACAAAAAGTAGTTTG+AGG | + | chr4_3:2188221-2188240 | Msa0624200:intron | 20.0% |
!! | TTAATCATGAAAGTAGAAAT+TGG | - | chr4_3:2188289-2188308 | None:intergenic | 20.0% |
!!! | TAAAATAATGAACTTTTTGC+AGG | - | chr4_3:2188415-2188434 | None:intergenic | 20.0% |
!! | AGTATATAACAAGACATTAT+GGG | - | chr4_3:2189061-2189080 | None:intergenic | 20.0% |
!! | AAGTATATAACAAGACATTA+TGG | - | chr4_3:2189062-2189081 | None:intergenic | 20.0% |
!!! | TTACCACTGTTTTTTTTTTT+TGG | + | chr4_3:2189158-2189177 | Msa0624200:intron | 20.0% |
!!! | TACCACTGTTTTTTTTTTTT+GGG | + | chr4_3:2189159-2189178 | Msa0624200:intron | 20.0% |
!!! | TTTTAAACAAAATCAAAGAG+TGG | - | chr4_3:2189344-2189363 | None:intergenic | 20.0% |
!! | TTTGTATGTCAATACATAAA+TGG | - | chr4_3:2189538-2189557 | None:intergenic | 20.0% |
!! | TGTTTGTTTGTTAAGAGTAA+CGG | - | chr4_3:2176042-2176061 | None:intergenic | 25.0% |
! | TAAGCTGAAAGATTTATGTT+TGG | + | chr4_3:2176182-2176201 | Msa0624200:CDS | 25.0% |
!! | TTGGATTTTGTTGAATATGA+TGG | + | chr4_3:2176201-2176220 | Msa0624200:CDS | 25.0% |
!!! | TTCGCTTCTTTTTAGAATAA+CGG | + | chr4_3:2176323-2176342 | Msa0624200:intron | 25.0% |
! | TTTCAAAATGTACAACTTGA+GGG | - | chr4_3:2176428-2176447 | None:intergenic | 25.0% |
! | ATTTCAAAATGTACAACTTG+AGG | - | chr4_3:2176429-2176448 | None:intergenic | 25.0% |
! | AATTATTTGCAAGTTTCTTC+TGG | - | chr4_3:2176454-2176473 | None:intergenic | 25.0% |
! | CCTAAAACAAAATAGTTGTT+TGG | - | chr4_3:2176563-2176582 | None:intergenic | 25.0% |
!!! | CCAAACAACTATTTTGTTTT+AGG | + | chr4_3:2176560-2176579 | Msa0624200:intron | 25.0% |
!! | TTCATATTCTGATTTAGAGT+TGG | + | chr4_3:2176662-2176681 | Msa0624200:intron | 25.0% |
!! | TCATATTCTGATTTAGAGTT+GGG | + | chr4_3:2176663-2176682 | Msa0624200:intron | 25.0% |
!!! | ATTGATACCTAGCTTTTAAA+GGG | + | chr4_3:2176763-2176782 | Msa0624200:intron | 25.0% |
!! | TCCATTATAGCTAGATTTTA+AGG | + | chr4_3:2177007-2177026 | Msa0624200:intron | 25.0% |
!! | CCATTATAGCTAGATTTTAA+GGG | + | chr4_3:2177008-2177027 | Msa0624200:intron | 25.0% |
! | AAAACATGCAAACAGAAAAA+GGG | - | chr4_3:2177252-2177271 | None:intergenic | 25.0% |
! | AAAAACATGCAAACAGAAAA+AGG | - | chr4_3:2177253-2177272 | None:intergenic | 25.0% |
!!! | ACGTGTTTTAGAATTTAGAT+TGG | + | chr4_3:2177329-2177348 | Msa0624200:intron | 25.0% |
!! | ATCTACAAATTTTCAACCAT+AGG | - | chr4_3:2177514-2177533 | None:intergenic | 25.0% |
!!! | ACATAATGATAAAGTATTGC+AGG | - | chr4_3:2177548-2177567 | None:intergenic | 25.0% |
! | AACAGAATAATACCACAAAA+GGG | - | chr4_3:2177572-2177591 | None:intergenic | 25.0% |
! | AAACAGAATAATACCACAAA+AGG | - | chr4_3:2177573-2177592 | None:intergenic | 25.0% |
!!! | TTATTGTTGATAACGAGAAA+AGG | - | chr4_3:2177682-2177701 | None:intergenic | 25.0% |
!! | GACAATATTATTTTCAGATG+CGG | - | chr4_3:2177985-2178004 | None:intergenic | 25.0% |
!! | TGCATTTTTATTCTTTTCTG+TGG | + | chr4_3:2178272-2178291 | Msa0624200:intron | 25.0% |
!! | TGCATATTTGAAATCTAGAA+AGG | - | chr4_3:2178315-2178334 | None:intergenic | 25.0% |
! | TGAATTTACCAAAATGGTTT+AGG | - | chr4_3:2178394-2178413 | None:intergenic | 25.0% |
!!! | AAACCATTTTGGTAAATTCA+TGG | + | chr4_3:2178394-2178413 | Msa0624200:intron | 25.0% |
!! | TTTTATGGGAATATATGAGA+TGG | + | chr4_3:2178475-2178494 | Msa0624200:intron | 25.0% |
! | AGGTTTGTCCAAATTATATT+CGG | + | chr4_3:2178518-2178537 | Msa0624200:intron | 25.0% |
! | ATTGGATTCCTTATGTAATA+AGG | - | chr4_3:2178587-2178606 | None:intergenic | 25.0% |
! | ATCCAATTCAAGTAATTTGA+AGG | + | chr4_3:2178600-2178619 | Msa0624200:CDS | 25.0% |
! | TTCCTTCAAATTACTTGAAT+TGG | - | chr4_3:2178605-2178624 | None:intergenic | 25.0% |
!! | TTCTATGTTAGTTTCTCATT+TGG | + | chr4_3:2178769-2178788 | Msa0624200:intron | 25.0% |
! | TAAAATATAGTGATCAACAC+AGG | - | chr4_3:2178839-2178858 | None:intergenic | 25.0% |
!! | ACTATATTTTATCTTCTGTC+AGG | + | chr4_3:2178848-2178867 | Msa0624200:intron | 25.0% |
! | GATGATTCCAAAAAAATGAA+AGG | - | chr4_3:2179057-2179076 | None:intergenic | 25.0% |
!!! | AATCATCTTTTTTACACTGT+TGG | + | chr4_3:2179070-2179089 | Msa0624200:intron | 25.0% |
! | GACTATAAGCATTTCAAAAT+TGG | - | chr4_3:2179137-2179156 | None:intergenic | 25.0% |
! | ATAGTCTAACCCTATATATA+AGG | + | chr4_3:2179151-2179170 | Msa0624200:intron | 25.0% |
! | TAGTCTAACCCTATATATAA+GGG | + | chr4_3:2179152-2179171 | Msa0624200:intron | 25.0% |
! | TATAACCATAGTAAAGAACA+GGG | - | chr4_3:2179323-2179342 | None:intergenic | 25.0% |
! | GTTTAATACTTGTCAAGTTA+AGG | + | chr4_3:2179540-2179559 | Msa0624200:intron | 25.0% |
!! | TTGAATTTTCTTCTTGTGAA+AGG | + | chr4_3:2179717-2179736 | Msa0624200:CDS | 25.0% |
! | GTACACTTATTCTTAGAAAT+CGG | + | chr4_3:2179870-2179889 | Msa0624200:intron | 25.0% |
! | TACACTTATTCTTAGAAATC+GGG | + | chr4_3:2179871-2179890 | Msa0624200:intron | 25.0% |
! | CTGATACCATCTTAAAATTT+AGG | + | chr4_3:2180073-2180092 | Msa0624200:intron | 25.0% |
! | TACCATCTTAAAATTTAGGT+TGG | + | chr4_3:2180077-2180096 | Msa0624200:intron | 25.0% |
!! | ACCATCTTAAAATTTAGGTT+GGG | + | chr4_3:2180078-2180097 | Msa0624200:intron | 25.0% |
!!! | TTAACTCAACCTTTTAAAAC+TGG | + | chr4_3:2180102-2180121 | Msa0624200:intron | 25.0% |
! | TCAAAGAATCCAAAAGATTT+AGG | + | chr4_3:2180224-2180243 | Msa0624200:intron | 25.0% |
! | CAAAGAATCCAAAAGATTTA+GGG | + | chr4_3:2180225-2180244 | Msa0624200:intron | 25.0% |
!! | TTTTCTATCCCTAAATCTTT+TGG | - | chr4_3:2180236-2180255 | None:intergenic | 25.0% |
! | ATTGTCATTAAATGATCATG+GGG | - | chr4_3:2180399-2180418 | None:intergenic | 25.0% |
! | CATTGTCATTAAATGATCAT+GGG | - | chr4_3:2180400-2180419 | None:intergenic | 25.0% |
! | ACATTGTCATTAAATGATCA+TGG | - | chr4_3:2180401-2180420 | None:intergenic | 25.0% |
! | ATTTAATGACAATGTTTGCT+GGG | + | chr4_3:2180406-2180425 | Msa0624200:intron | 25.0% |
! | ACTTGATTGTGATAATCAAT+CGG | - | chr4_3:2180561-2180580 | None:intergenic | 25.0% |
!!! | TTTCTTTGGAATTCAATTGT+GGG | - | chr4_3:2180820-2180839 | None:intergenic | 25.0% |
! | ATTAGGGTATGTCTATAAAT+AGG | - | chr4_3:2180961-2180980 | None:intergenic | 25.0% |
! | TAAATATATGGAAATTAGGG+TGG | - | chr4_3:2181032-2181051 | None:intergenic | 25.0% |
! | TTAATATTCTAATCCAGACA+AGG | - | chr4_3:2181066-2181085 | None:intergenic | 25.0% |
! | ATATTAGAACAACTGTATCA+TGG | + | chr4_3:2181152-2181171 | Msa0624200:intron | 25.0% |
!! | AGATTTTGTGTTCCAAAATT+AGG | + | chr4_3:2181371-2181390 | Msa0624200:CDS | 25.0% |
!! | AAAGGATAATCTCCTAATTT+TGG | - | chr4_3:2181386-2181405 | None:intergenic | 25.0% |
! | AAAAAACATAAATTGGAACC+TGG | + | chr4_3:2181772-2181791 | Msa0624200:intron | 25.0% |
! | ACAAAATGAATGAAAAAAGC+TGG | - | chr4_3:2181924-2181943 | None:intergenic | 25.0% |
!! | TCATTCATTTTGTGTTTGAT+AGG | + | chr4_3:2181931-2181950 | Msa0624200:intron | 25.0% |
!!! | GAATTTTAACTAGCAATGTT+TGG | + | chr4_3:2181993-2182012 | Msa0624200:intron | 25.0% |
!! | GCACAAATTTTTAATGTAAG+TGG | + | chr4_3:2182460-2182479 | Msa0624200:intron | 25.0% |
!! | TAAGCTAGTTTATAGCTTAT+TGG | + | chr4_3:2182519-2182538 | Msa0624200:intron | 25.0% |
!! | GCACAAATTTTTAATGTAAG+TGG | + | chr4_3:2182460-2182479 | Msa0624200:intron | 25.0% |
!! | TAAGCTAGTTTATAGCTTAT+TGG | + | chr4_3:2182519-2182538 | Msa0624200:intron | 25.0% |
!! | GCACAAATTTTTAATGTAAG+TGG | + | chr4_3:2182460-2182479 | Msa0624200:intron | 25.0% |
!! | TAAGCTAGTTTATAGCTTAT+TGG | + | chr4_3:2182519-2182538 | Msa0624200:intron | 25.0% |
!!! | TCTTGGCTTTTTTTCTATTT+AGG | - | chr4_3:2183816-2183835 | None:intergenic | 25.0% |
! | GAAATTTCAATCTGTTTAGT+TGG | - | chr4_3:2183884-2183903 | None:intergenic | 25.0% |
! | ATAATCATTATATGTAGTGG+GGG | + | chr4_3:2183960-2183979 | Msa0624200:intron | 25.0% |
!! | TTATATCTGTGACTCTTTTT+AGG | - | chr4_3:2184244-2184263 | None:intergenic | 25.0% |
!!! | ACCCATTTTTAAAGATGTAA+TGG | - | chr4_3:2184269-2184288 | None:intergenic | 25.0% |
!! | TAGGTTGAATTTAAAGTGTT+TGG | - | chr4_3:2184459-2184478 | None:intergenic | 25.0% |
! | AAGAATGTTGTTGAAATTTG+GGG | - | chr4_3:2184734-2184753 | None:intergenic | 25.0% |
! | CAAGAATGTTGTTGAAATTT+GGG | - | chr4_3:2184735-2184754 | None:intergenic | 25.0% |
! | ACTATCTTAGTTTATCTCTT+AGG | + | chr4_3:2185379-2185398 | Msa0624200:intron | 25.0% |
!! | CTACATGTAAACACATTTTT+AGG | + | chr4_3:2185608-2185627 | Msa0624200:intron | 25.0% |
! | ATATCGAATTAGATGAGATA+TGG | - | chr4_3:2185634-2185653 | None:intergenic | 25.0% |
! | ATATCTCATCTAATTCGATA+TGG | + | chr4_3:2185633-2185652 | Msa0624200:intron | 25.0% |
! | TATCTCATCTAATTCGATAT+GGG | + | chr4_3:2185634-2185653 | Msa0624200:intron | 25.0% |
! | GATCAATCCAAATATTAAGA+TGG | - | chr4_3:2185736-2185755 | None:intergenic | 25.0% |
! | ACAAGTTGCAAAAAAATAAC+TGG | - | chr4_3:2186074-2186093 | None:intergenic | 25.0% |
! | TGATACTTAATTATACCCTA+CGG | + | chr4_3:2186455-2186474 | Msa0624200:intron | 25.0% |
! | AGAACATTCTACTTGAATTT+AGG | - | chr4_3:2186842-2186861 | None:intergenic | 25.0% |
! | ATGATGCCATATTAGAATTT+CGG | + | chr4_3:2187047-2187066 | Msa0624200:intron | 25.0% |
!! | AAATTTTCAAACCTAGACAT+GGG | - | chr4_3:2187183-2187202 | None:intergenic | 25.0% |
!! | AAAATTTTCAAACCTAGACA+TGG | - | chr4_3:2187184-2187203 | None:intergenic | 25.0% |
!! | ATGTCTAGGTTTGAAAATTT+TGG | + | chr4_3:2187183-2187202 | Msa0624200:intron | 25.0% |
!! | TGTCTAGGTTTGAAAATTTT+GGG | + | chr4_3:2187184-2187203 | Msa0624200:intron | 25.0% |
! | TTGAGATTCAAATTCAAAGA+TGG | - | chr4_3:2187267-2187286 | None:intergenic | 25.0% |
! | GAATTTGAATCTCAATAAAC+TGG | + | chr4_3:2187272-2187291 | Msa0624200:intron | 25.0% |
! | AATAAACTTAAATTCCTTGC+CGG | + | chr4_3:2187357-2187376 | Msa0624200:intron | 25.0% |
! | ATATAATTAACCGCGTTTAT+TGG | + | chr4_3:2187557-2187576 | Msa0624200:intron | 25.0% |
! | AATTAAAGAGAAAACATGCT+GGG | - | chr4_3:2187588-2187607 | None:intergenic | 25.0% |
! | TAATTAAAGAGAAAACATGC+TGG | - | chr4_3:2187589-2187608 | None:intergenic | 25.0% |
!! | CATGTTTTCTCTTTAATTAC+TGG | + | chr4_3:2187590-2187609 | Msa0624200:intron | 25.0% |
! | AAGTAGTTGTAAGTATATAG+TGG | + | chr4_3:2187953-2187972 | Msa0624200:intron | 25.0% |
! | AGTAGTTGTAAGTATATAGT+GGG | + | chr4_3:2187954-2187973 | Msa0624200:intron | 25.0% |
!!! | TATAACTTGGGTTTTGTAAT+TGG | + | chr4_3:2188147-2188166 | Msa0624200:intron | 25.0% |
! | ATCATGTATGGTTATTAACA+TGG | + | chr4_3:2188190-2188209 | Msa0624200:intron | 25.0% |
! | ATGGTTATTAACATGGTAAA+AGG | + | chr4_3:2188197-2188216 | Msa0624200:intron | 25.0% |
!! | GCAATGTTTTCTCAATATAT+CGG | - | chr4_3:2188267-2188286 | None:intergenic | 25.0% |
! | ATACAAGTTAGATTGATCTT+TGG | + | chr4_3:2188364-2188383 | Msa0624200:intron | 25.0% |
! | TACAAGTTAGATTGATCTTT+GGG | + | chr4_3:2188365-2188384 | Msa0624200:intron | 25.0% |
!!! | ATTATTTTAGTAATGGTTGC+AGG | + | chr4_3:2188426-2188445 | Msa0624200:intron | 25.0% |
! | CTTTCAATGGATCATATATA+CGG | + | chr4_3:2188775-2188794 | Msa0624200:CDS | 25.0% |
! | TTTCAATGGATCATATATAC+GGG | + | chr4_3:2188776-2188795 | Msa0624200:CDS | 25.0% |
! | CATCTAAGTAAGTAGAAAAT+AGG | - | chr4_3:2188834-2188853 | None:intergenic | 25.0% |
! | TTTAATTATGTTTGCATCGA+CGG | + | chr4_3:2188904-2188923 | Msa0624200:intron | 25.0% |
! | TGTTATAGATAACCAGAAAA+GGG | - | chr4_3:2188986-2189005 | None:intergenic | 25.0% |
! | ATGTTATAGATAACCAGAAA+AGG | - | chr4_3:2188987-2189006 | None:intergenic | 25.0% |
! | AAGGAGACTAAATTATATAG+AGG | - | chr4_3:2189115-2189134 | None:intergenic | 25.0% |
! | TGGTAAGAAGACTAAAATAT+TGG | - | chr4_3:2189144-2189163 | None:intergenic | 25.0% |
! | TGAATGTCAAATAATCTATG+TGG | + | chr4_3:2189370-2189389 | Msa0624200:intron | 25.0% |
! | GAATGTCAAATAATCTATGT+GGG | + | chr4_3:2189371-2189390 | Msa0624200:intron | 25.0% |
!! | CATGTTTAAGTTAGGTTTAA+GGG | - | chr4_3:2189424-2189443 | None:intergenic | 25.0% |
!! | ACATGTTTAAGTTAGGTTTA+AGG | - | chr4_3:2189425-2189444 | None:intergenic | 25.0% |
!! | TTAACTGTTTTATCCATCAT+TGG | + | chr4_3:2189767-2189786 | Msa0624200:intron | 25.0% |
AGTTGAAACCAAACCAAAAT+CGG | - | chr4_3:2176114-2176133 | None:intergenic | 30.0% | |
ATGAAATGAGAAGAAACGAA+GGG | + | chr4_3:2176154-2176173 | Msa0624200:CDS | 30.0% | |
ATGATTAACCTGATGAAGAA+TGG | - | chr4_3:2176283-2176302 | None:intergenic | 30.0% | |
! | TTGTCTTTTCACTTGGTTAA+AGG | + | chr4_3:2176357-2176376 | Msa0624200:intron | 30.0% |
! | TGTCTTTTCACTTGGTTAAA+GGG | + | chr4_3:2176358-2176377 | Msa0624200:intron | 30.0% |
TTCAAAATGTACAACTTGAG+GGG | - | chr4_3:2176427-2176446 | None:intergenic | 30.0% | |
TGAAAAATGTATTGTGCGAT+CGG | + | chr4_3:2176609-2176628 | Msa0624200:intron | 30.0% | |
ACTTGAGAACTATGTATGAA+TGG | - | chr4_3:2176641-2176660 | None:intergenic | 30.0% | |
ATACTACTCGATGTGAAAAT+CGG | - | chr4_3:2176702-2176721 | None:intergenic | 30.0% | |
! | CTTTAAAAGCTAGGTATCAA+TGG | - | chr4_3:2176764-2176783 | None:intergenic | 30.0% |
!! | CATTGATACCTAGCTTTTAA+AGG | + | chr4_3:2176762-2176781 | Msa0624200:intron | 30.0% |
! | TTGTCATTTAGTATCAGACA+TGG | + | chr4_3:2176810-2176829 | Msa0624200:intron | 30.0% |
ATAGAGACTTGGGTATTATA+GGG | + | chr4_3:2176912-2176931 | Msa0624200:intron | 30.0% | |
CCCTTAAAATCTAGCTATAA+TGG | - | chr4_3:2177011-2177030 | None:intergenic | 30.0% | |
AAACATGCAAACAGAAAAAG+GGG | - | chr4_3:2177251-2177270 | None:intergenic | 30.0% | |
AGTATACCAATTTAGCATTG+TGG | + | chr4_3:2177476-2177495 | Msa0624200:intron | 30.0% | |
AGTAAACCACAATGCTAAAT+TGG | - | chr4_3:2177485-2177504 | None:intergenic | 30.0% | |
ATTTAGCATTGTGGTTTACT+TGG | + | chr4_3:2177485-2177504 | Msa0624200:intron | 30.0% | |
! | AAGTATTGCAGGTAAAAAGT+TGG | - | chr4_3:2177537-2177556 | None:intergenic | 30.0% |
! | TATCATTATGTTCCCTTTTG+TGG | + | chr4_3:2177557-2177576 | Msa0624200:intron | 30.0% |
TCTTCATGTAAGTAAAGAAC+TGG | - | chr4_3:2177724-2177743 | None:intergenic | 30.0% | |
TCAAAATCAACAGTAACATG+TGG | - | chr4_3:2177784-2177803 | None:intergenic | 30.0% | |
!!! | TGTTGATTTTGAGTTTCCTT+TGG | + | chr4_3:2177792-2177811 | Msa0624200:CDS | 30.0% |
! | TTGAGTTTCCTTTGGAAAAA+TGG | + | chr4_3:2177800-2177819 | Msa0624200:CDS | 30.0% |
! | TGAGTTTCCTTTGGAAAAAT+GGG | + | chr4_3:2177801-2177820 | Msa0624200:CDS | 30.0% |
TGAAATGGGGAATATAGTTA+AGG | - | chr4_3:2178007-2178026 | None:intergenic | 30.0% | |
ATACTACTTACTTAGTGTCT+TGG | + | chr4_3:2178076-2178095 | Msa0624200:intron | 30.0% | |
TAAACACATTCGTATGCAAA+AGG | + | chr4_3:2178117-2178136 | Msa0624200:intron | 30.0% | |
AAACACATTCGTATGCAAAA+GGG | + | chr4_3:2178118-2178137 | Msa0624200:intron | 30.0% | |
AAATGGTTTAGGTCAAACTT+GGG | - | chr4_3:2178383-2178402 | None:intergenic | 30.0% | |
AAAATGGTTTAGGTCAAACT+TGG | - | chr4_3:2178384-2178403 | None:intergenic | 30.0% | |
! | AAGTTTGACCTAAACCATTT+TGG | + | chr4_3:2178383-2178402 | Msa0624200:intron | 30.0% |
!!! | CTATCTCCTTTTGTTATTAC+AGG | + | chr4_3:2178498-2178517 | Msa0624200:intron | 30.0% |
GACAAACCTGTAATAACAAA+AGG | - | chr4_3:2178507-2178526 | None:intergenic | 30.0% | |
ATGTGAAGCCGAATATAATT+TGG | - | chr4_3:2178529-2178548 | None:intergenic | 30.0% | |
TATATTCGGCTTCACATTAA+TGG | + | chr4_3:2178532-2178551 | Msa0624200:CDS | 30.0% | |
ATATTCGGCTTCACATTAAT+GGG | + | chr4_3:2178533-2178552 | Msa0624200:CDS | 30.0% | |
ACTGTCTTCCTTATTACATA+AGG | + | chr4_3:2178576-2178595 | Msa0624200:CDS | 30.0% | |
! | TGTGCATCTGATTGTAATTT+TGG | + | chr4_3:2178737-2178756 | Msa0624200:intron | 30.0% |
! | TCATCTATTGATAACTTCAG+AGG | - | chr4_3:2178879-2178898 | None:intergenic | 30.0% |
AGACCTAAAATAGACTAACA+GGG | - | chr4_3:2178989-2179008 | None:intergenic | 30.0% | |
AAGACCTAAAATAGACTAAC+AGG | - | chr4_3:2178990-2179009 | None:intergenic | 30.0% | |
GTTATGAACCATGATCTAAA+AGG | + | chr4_3:2179020-2179039 | Msa0624200:intron | 30.0% | |
!!! | GGGTAAACCTTTCATTTTTT+TGG | + | chr4_3:2179047-2179066 | Msa0624200:intron | 30.0% |
! | AAAAAGTTGAGCCACTTTAT+TGG | + | chr4_3:2179178-2179197 | Msa0624200:intron | 30.0% |
! | AAAAGTTGAGCCACTTTATT+GGG | + | chr4_3:2179179-2179198 | Msa0624200:intron | 30.0% |
GTATAACCATAGTAAAGAAC+AGG | - | chr4_3:2179324-2179343 | None:intergenic | 30.0% | |
AACTTTGCCTTTGCATAATT+TGG | + | chr4_3:2179417-2179436 | Msa0624200:intron | 30.0% | |
!! | GTTGTTTTATCAGATGCATT+TGG | + | chr4_3:2179475-2179494 | Msa0624200:CDS | 30.0% |
ACTTGACAAGTATTAAACCA+AGG | - | chr4_3:2179538-2179557 | None:intergenic | 30.0% | |
! | ATATTCACGTTACCTTTTTC+TGG | + | chr4_3:2179594-2179613 | Msa0624200:intron | 30.0% |
!!! | TACCTTTTTCTGGTTATTGT+AGG | + | chr4_3:2179604-2179623 | Msa0624200:intron | 30.0% |
AACCTACAATAACCAGAAAA+AGG | - | chr4_3:2179609-2179628 | None:intergenic | 30.0% | |
! | AAGGCCTAGTAAATTTTTGT+TGG | + | chr4_3:2179736-2179755 | Msa0624200:CDS | 30.0% |
! | AGGCCTAGTAAATTTTTGTT+GGG | + | chr4_3:2179737-2179756 | Msa0624200:CDS | 30.0% |
TAAAAATACCGCATGAACAT+TGG | + | chr4_3:2179792-2179811 | Msa0624200:intron | 30.0% | |
ATAATTATTCACTGACCAAG+TGG | + | chr4_3:2179841-2179860 | Msa0624200:intron | 30.0% | |
!!! | CCTTATAAGCCAGTTTTAAA+AGG | - | chr4_3:2180114-2180133 | None:intergenic | 30.0% |
!!! | CCTTTTAAAACTGGCTTATA+AGG | + | chr4_3:2180111-2180130 | Msa0624200:intron | 30.0% |
TGAACATACGTTTATAAGTG+GGG | - | chr4_3:2180147-2180166 | None:intergenic | 30.0% | |
CTGAACATACGTTTATAAGT+GGG | - | chr4_3:2180148-2180167 | None:intergenic | 30.0% | |
ATACATATGCTACAGCTTAA+GGG | - | chr4_3:2180335-2180354 | None:intergenic | 30.0% | |
TTACATATGCAAGTTATCCT+AGG | + | chr4_3:2180372-2180391 | Msa0624200:intron | 30.0% | |
CATTTAATGACAATGTTTGC+TGG | + | chr4_3:2180405-2180424 | Msa0624200:intron | 30.0% | |
CAAATCTAATCTTTCATGTG+AGG | - | chr4_3:2180523-2180542 | None:intergenic | 30.0% | |
TTATCACAATCAAGTTCCAT+AGG | + | chr4_3:2180566-2180585 | Msa0624200:intron | 30.0% | |
!! | ATCTCTATTAGTCTTGTGTT+AGG | + | chr4_3:2180792-2180811 | Msa0624200:intron | 30.0% |
!! | GTTTCTTTGGAATTCAATTG+TGG | - | chr4_3:2180821-2180840 | None:intergenic | 30.0% |
CTATAAATAGGAGAACAGAA+AGG | - | chr4_3:2180949-2180968 | None:intergenic | 30.0% | |
TGGTTAAAGTAGTTATGAGT+TGG | - | chr4_3:2181012-2181031 | None:intergenic | 30.0% | |
! | CACACAAATGAACCTTATTT+CGG | + | chr4_3:2181109-2181128 | Msa0624200:intron | 30.0% |
! | ACACAAATGAACCTTATTTC+GGG | + | chr4_3:2181110-2181129 | Msa0624200:intron | 30.0% |
CTAATATAGCGTATATCCAA+GGG | - | chr4_3:2181139-2181158 | None:intergenic | 30.0% | |
TCTAATATAGCGTATATCCA+AGG | - | chr4_3:2181140-2181159 | None:intergenic | 30.0% | |
ACTTACAAATTACAATGACC+TGG | + | chr4_3:2181204-2181223 | Msa0624200:intron | 30.0% | |
! | TCATTGGAAAGTATGAATTC+TGG | + | chr4_3:2181542-2181561 | Msa0624200:CDS | 30.0% |
CAAGATATCTGTATCAGTTA+AGG | + | chr4_3:2181616-2181635 | Msa0624200:CDS | 30.0% | |
AATAAGAATGCAAACGAAAC+AGG | - | chr4_3:2181714-2181733 | None:intergenic | 30.0% | |
!!! | CTTTTTCAACTTGAATGTAC+TGG | + | chr4_3:2181971-2181990 | Msa0624200:intron | 30.0% |
TGCTTTACTTTCCAAATTTC+TGG | + | chr4_3:2182118-2182137 | Msa0624200:intron | 30.0% | |
! | ATGATTTGTGACCAGAAATT+TGG | - | chr4_3:2182132-2182151 | None:intergenic | 30.0% |
ATACTATAAGCTTAAGCCTA+TGG | + | chr4_3:2182150-2182169 | Msa0624200:intron | 30.0% | |
TACTATAAGCTTAAGCCTAT+GGG | + | chr4_3:2182151-2182170 | Msa0624200:intron | 30.0% | |
!! | CTTAAGCTTTCTAGCTAATT+GGG | - | chr4_3:2182325-2182344 | None:intergenic | 30.0% |
AAGTGGTGTAACTTAAACAT+TGG | + | chr4_3:2182477-2182496 | Msa0624200:intron | 30.0% | |
!! | CTTAAGCTTTCTAGCTAATT+GGG | - | chr4_3:2182325-2182344 | None:intergenic | 30.0% |
AAGTGGTGTAACTTAAACAT+TGG | + | chr4_3:2182477-2182496 | Msa0624200:intron | 30.0% | |
!! | CTTAAGCTTTCTAGCTAATT+GGG | - | chr4_3:2182325-2182344 | None:intergenic | 30.0% |
AAGTGGTGTAACTTAAACAT+TGG | + | chr4_3:2182477-2182496 | Msa0624200:intron | 30.0% | |
! | TAATCATTATATGTAGTGGG+GGG | + | chr4_3:2183961-2183980 | Msa0624200:intron | 30.0% |
TTGATGCTTCTAACTTTCTA+TGG | - | chr4_3:2184117-2184136 | None:intergenic | 30.0% | |
! | TTTTCTATCAGCTTAGCTTA+TGG | + | chr4_3:2184503-2184522 | Msa0624200:intron | 30.0% |
!!! | TATGGCTTTGTTTTACCAAA+TGG | + | chr4_3:2184521-2184540 | Msa0624200:intron | 30.0% |
CTTGATAAGAGTTTATAACG+AGG | + | chr4_3:2184663-2184682 | Msa0624200:intron | 30.0% | |
GCAAGAATGTTGTTGAAATT+TGG | - | chr4_3:2184736-2184755 | None:intergenic | 30.0% | |
GTTAAAGGAAACATCTGAAA+AGG | - | chr4_3:2184771-2184790 | None:intergenic | 30.0% | |
CTTCTTCAAAGTTAAGAGAT+CGG | - | chr4_3:2184863-2184882 | None:intergenic | 30.0% | |
AAATTCACCTTCAAATAGCA+TGG | + | chr4_3:2184926-2184945 | Msa0624200:CDS | 30.0% | |
AGACAAAGAAATTTCAGAGT+TGG | + | chr4_3:2185052-2185071 | Msa0624200:CDS | 30.0% | |
AAAATTGCTAGTTCCTAGAA+AGG | + | chr4_3:2185182-2185201 | Msa0624200:intron | 30.0% | |
!! | TTTTTCAGAACAACCTTTCT+AGG | - | chr4_3:2185198-2185217 | None:intergenic | 30.0% |
TCTGACGATATATTCTAGAT+AGG | - | chr4_3:2185302-2185321 | None:intergenic | 30.0% | |
! | ATTAGTTTCCCTATTTGAGT+TGG | + | chr4_3:2185433-2185452 | Msa0624200:intron | 30.0% |
TCATTCTTGATATTAGGGTT+AGG | + | chr4_3:2185536-2185555 | Msa0624200:intron | 30.0% | |
CGTTACAAACCAAATTTGTA+GGG | - | chr4_3:2185572-2185591 | None:intergenic | 30.0% | |
ACGTTACAAACCAAATTTGT+AGG | - | chr4_3:2185573-2185592 | None:intergenic | 30.0% | |
TCTGATGCCATCTTAATATT+TGG | + | chr4_3:2185726-2185745 | Msa0624200:intron | 30.0% | |
AAAATGTGTATATAAGTGGC+AGG | - | chr4_3:2185800-2185819 | None:intergenic | 30.0% | |
TTGTCATATCTCATCCAATA+TGG | + | chr4_3:2185820-2185839 | Msa0624200:intron | 30.0% | |
TGTCATATCTCATCCAATAT+GGG | + | chr4_3:2185821-2185840 | Msa0624200:intron | 30.0% | |
GTTGCAAAAAAATAACTGGT+TGG | - | chr4_3:2186070-2186089 | None:intergenic | 30.0% | |
TTTGATTGTCCTGAGATTTA+GGG | - | chr4_3:2186145-2186164 | None:intergenic | 30.0% | |
TCAAAGTTAATACACTCTTC+TGG | + | chr4_3:2186160-2186179 | Msa0624200:intron | 30.0% | |
GCAAGGATAGAATTTAAACA+AGG | - | chr4_3:2186308-2186327 | None:intergenic | 30.0% | |
GTTTAAATTCTATCCTTGCT+TGG | + | chr4_3:2186309-2186328 | Msa0624200:intron | 30.0% | |
! | ACAAGTAAGAGCAATTTTGA+GGG | - | chr4_3:2186395-2186414 | None:intergenic | 30.0% |
!!! | TTTTGTTTTTTGCATCCGTA+GGG | - | chr4_3:2186473-2186492 | None:intergenic | 30.0% |
! | AGATTCTTACAATTTGGGTT+TGG | + | chr4_3:2186865-2186884 | Msa0624200:intron | 30.0% |
ACAATCCAAATGCTAAATCT+TGG | - | chr4_3:2186990-2187009 | None:intergenic | 30.0% | |
GAAATTCTAATATGGCATCA+TGG | - | chr4_3:2187048-2187067 | None:intergenic | 30.0% | |
!! | ATGACCTGAAAAGTGTTTAA+AGG | - | chr4_3:2187127-2187146 | None:intergenic | 30.0% |
ATAAACTTAAATTCCTTGCC+GGG | + | chr4_3:2187358-2187377 | Msa0624200:intron | 30.0% | |
TACTGCAAAATAATGACAGA+AGG | - | chr4_3:2187503-2187522 | None:intergenic | 30.0% | |
TAGAAGATGGAACTAATCTT+TGG | + | chr4_3:2187657-2187676 | Msa0624200:CDS | 30.0% | |
CACATAGATACTATCATGTA+TGG | + | chr4_3:2188178-2188197 | Msa0624200:intron | 30.0% | |
! | TAGAGAACTTTGAGAAGTTA+TGG | + | chr4_3:2188497-2188516 | Msa0624200:CDS | 30.0% |
ATGAATCCTTCAATCCATTT+AGG | - | chr4_3:2188592-2188611 | None:intergenic | 30.0% | |
! | AACGTGGTACTTTTATACTT+CGG | + | chr4_3:2188662-2188681 | Msa0624200:CDS | 30.0% |
ATATGTAACAATTAGGCAAC+CGG | - | chr4_3:2188722-2188741 | None:intergenic | 30.0% | |
TGCCTAATTGTTACATATGT+TGG | + | chr4_3:2188724-2188743 | Msa0624200:CDS | 30.0% | |
GCCTAATTGTTACATATGTT+GGG | + | chr4_3:2188725-2188744 | Msa0624200:CDS | 30.0% | |
TCCCAACATATGTAACAATT+AGG | - | chr4_3:2188729-2188748 | None:intergenic | 30.0% | |
GTTATAGATAACCAGAAAAG+GGG | - | chr4_3:2188985-2189004 | None:intergenic | 30.0% | |
ACTAAAATATTGGCAACAGA+AGG | - | chr4_3:2189134-2189153 | None:intergenic | 30.0% | |
GACCCAAAAAAAAAAAACAG+TGG | - | chr4_3:2189164-2189183 | None:intergenic | 30.0% | |
!!! | ATTGACAGTAGTTTGGTTTT+AGG | - | chr4_3:2189209-2189228 | None:intergenic | 30.0% |
CCAAATTATTGACAGTAGTT+TGG | - | chr4_3:2189216-2189235 | None:intergenic | 30.0% | |
CCAAACTACTGTCAATAATT+TGG | + | chr4_3:2189213-2189232 | Msa0624200:intron | 30.0% | |
! | GCTTGTAACATGTTTAAGTT+AGG | - | chr4_3:2189432-2189451 | None:intergenic | 30.0% |
!! | TACAAGCTCTTAATTTGTCT+TGG | + | chr4_3:2189445-2189464 | Msa0624200:intron | 30.0% |
TATTGACATACAAACACAGA+TGG | + | chr4_3:2189544-2189563 | Msa0624200:intron | 30.0% | |
ATATATCTTACCTTCCCAAA+CGG | - | chr4_3:2189701-2189720 | None:intergenic | 30.0% | |
CAACTTTGACTGGAAATTAA+GGG | - | chr4_3:2189854-2189873 | None:intergenic | 30.0% | |
TTGGGATTATAGATTCACAA+AGG | + | chr4_3:2189885-2189904 | Msa0624200:CDS | 30.0% | |
! | GTTTGTTAAGAGTAACGGTT+TGG | - | chr4_3:2176037-2176056 | None:intergenic | 35.0% |
ATTGTGTGACTTTGTGTTGA+CGG | - | chr4_3:2176088-2176107 | None:intergenic | 35.0% | |
!!! | ACAATTCACCGATTTTGGTT+TGG | + | chr4_3:2176103-2176122 | Msa0624200:five_prime_UTR | 35.0% |
TTTCAACTTGACACAGTGAT+GGG | + | chr4_3:2176126-2176145 | Msa0624200:exon | 35.0% | |
GATGAAATGAGAAGAAACGA+AGG | + | chr4_3:2176153-2176172 | Msa0624200:CDS | 35.0% | |
! | GAACTTTCTCTTTCTGCTTT+TGG | + | chr4_3:2176223-2176242 | Msa0624200:CDS | 35.0% |
ATTAACCTGATGAAGAATGG+TGG | - | chr4_3:2176280-2176299 | None:intergenic | 35.0% | |
!!! | TTTTAGAATAACGGTTTCCC+TGG | + | chr4_3:2176332-2176351 | Msa0624200:intron | 35.0% |
CAAGTGAAAAGACAAATCCA+GGG | - | chr4_3:2176352-2176371 | None:intergenic | 35.0% | |
TACTACTCGATGTGAAAATC+GGG | - | chr4_3:2176701-2176720 | None:intergenic | 35.0% | |
! | GATTTCTCCCTTTAAAAGCT+AGG | - | chr4_3:2176773-2176792 | None:intergenic | 35.0% |
!! | TGACAAGTATCGAAACACTT+GGG | - | chr4_3:2176796-2176815 | None:intergenic | 35.0% |
!! | ATGACAAGTATCGAAACACT+TGG | - | chr4_3:2176797-2176816 | None:intergenic | 35.0% |
ATAGTGCTATGATAGAGACT+TGG | + | chr4_3:2176901-2176920 | Msa0624200:intron | 35.0% | |
TAGTGCTATGATAGAGACTT+GGG | + | chr4_3:2176902-2176921 | Msa0624200:intron | 35.0% | |
GATAGAGACTTGGGTATTAT+AGG | + | chr4_3:2176911-2176930 | Msa0624200:intron | 35.0% | |
ATAACACTCAATGTGGGATT+TGG | - | chr4_3:2176949-2176968 | None:intergenic | 35.0% | |
AAATCCCACATTGAGTGTTA+TGG | + | chr4_3:2176948-2176967 | Msa0624200:intron | 35.0% | |
AATCCCACATTGAGTGTTAT+GGG | + | chr4_3:2176949-2176968 | Msa0624200:intron | 35.0% | |
ATTGAGTGTTATGGGATGTT+CGG | + | chr4_3:2176957-2176976 | Msa0624200:intron | 35.0% | |
!!! | TTTTTTTGGGTTCGCAATAG+TGG | + | chr4_3:2177213-2177232 | Msa0624200:intron | 35.0% |
ATGCTAACATTATGTGATCG+AGG | + | chr4_3:2177379-2177398 | Msa0624200:intron | 35.0% | |
! | AGATATCCAAAGCCTTTTCT+GGG | - | chr4_3:2177455-2177474 | None:intergenic | 35.0% |
!! | ACATGAACCCATTTTTCCAA+AGG | - | chr4_3:2177811-2177830 | None:intergenic | 35.0% |
! | TTGGAAAAATGGGTTCATGT+TGG | + | chr4_3:2177811-2177830 | Msa0624200:CDS | 35.0% |
GTATCTTATATGACCACTTG+AGG | + | chr4_3:2177841-2177860 | Msa0624200:intron | 35.0% | |
TCAGATGCGGCTTATTATTA+AGG | - | chr4_3:2177972-2177991 | None:intergenic | 35.0% | |
! | TGCGTCTAGTGATTTGAAAT+GGG | - | chr4_3:2178021-2178040 | None:intergenic | 35.0% |
ATGCGTCTAGTGATTTGAAA+TGG | - | chr4_3:2178022-2178041 | None:intergenic | 35.0% | |
! | AAGGTGCTTATAAATAGGGA+TGG | + | chr4_3:2178219-2178238 | Msa0624200:intron | 35.0% |
GCTCCATGAATTTACCAAAA+TGG | - | chr4_3:2178400-2178419 | None:intergenic | 35.0% | |
TATTCGGCTTCACATTAATG+GGG | + | chr4_3:2178534-2178553 | Msa0624200:CDS | 35.0% | |
GGTTACGTGTACAATTATGA+AGG | + | chr4_3:2178667-2178686 | Msa0624200:CDS | 35.0% | |
! | CTATTGATAACTTCAGAGGA+GGG | - | chr4_3:2178875-2178894 | None:intergenic | 35.0% |
! | TCTATTGATAACTTCAGAGG+AGG | - | chr4_3:2178876-2178895 | None:intergenic | 35.0% |
AGATGAATCATCCATATCTG+AGG | + | chr4_3:2178893-2178912 | Msa0624200:CDS | 35.0% | |
TTCTTCTTCAACCTCAGATA+TGG | - | chr4_3:2178907-2178926 | None:intergenic | 35.0% | |
! | AAGAAGAAAGTGATGGTGTT+TGG | + | chr4_3:2178919-2178938 | Msa0624200:CDS | 35.0% |
! | AGAAGAAAGTGATGGTGTTT+GGG | + | chr4_3:2178920-2178939 | Msa0624200:CDS | 35.0% |
!! | ACACCCTGTTAGTCTATTTT+AGG | + | chr4_3:2178983-2179002 | Msa0624200:intron | 35.0% |
AACCATGATCTAAAAGGTCT+AGG | + | chr4_3:2179026-2179045 | Msa0624200:intron | 35.0% | |
ACCATGATCTAAAAGGTCTA+GGG | + | chr4_3:2179027-2179046 | Msa0624200:intron | 35.0% | |
!! | CTGTTGGCAGAGTTTAATTT+TGG | + | chr4_3:2179086-2179105 | Msa0624200:intron | 35.0% |
TGACAAGTATTAAACCAAGG+AGG | - | chr4_3:2179535-2179554 | None:intergenic | 35.0% | |
TCCATCATAGCTAGACAAAA+GGG | - | chr4_3:2179696-2179715 | None:intergenic | 35.0% | |
TTCCATCATAGCTAGACAAA+AGG | - | chr4_3:2179697-2179716 | None:intergenic | 35.0% | |
CGACCCAACAAAAATTTACT+AGG | - | chr4_3:2179743-2179762 | None:intergenic | 35.0% | |
ATTTAAGCTCAGGATATCTC+AGG | + | chr4_3:2179769-2179788 | Msa0624200:CDS | 35.0% | |
AAGTAGAACCAATGTTCATG+CGG | - | chr4_3:2179803-2179822 | None:intergenic | 35.0% | |
! | TAAGTGTACTGATATCCACT+TGG | - | chr4_3:2179859-2179878 | None:intergenic | 35.0% |
ACTTATTCTTAGAAATCGGG+TGG | + | chr4_3:2179874-2179893 | Msa0624200:intron | 35.0% | |
CTTATTCTTAGAAATCGGGT+GGG | + | chr4_3:2179875-2179894 | Msa0624200:intron | 35.0% | |
!! | CTTTATAAGCCGGTTTTGTA+AGG | - | chr4_3:2179911-2179930 | None:intergenic | 35.0% |
!! | GCCCAACCTAAATTTTAAGA+TGG | - | chr4_3:2180082-2180101 | None:intergenic | 35.0% |
GAACATACGTTTATAAGTGG+GGG | - | chr4_3:2180146-2180165 | None:intergenic | 35.0% | |
CCTGAACATACGTTTATAAG+TGG | - | chr4_3:2180149-2180168 | None:intergenic | 35.0% | |
CCACTTATAAACGTATGTTC+AGG | + | chr4_3:2180146-2180165 | Msa0624200:intron | 35.0% | |
AAGTGTTAAGAAACCCACAT+TGG | - | chr4_3:2180183-2180202 | None:intergenic | 35.0% | |
TACATATGCTACAGCTTAAG+GGG | - | chr4_3:2180334-2180353 | None:intergenic | 35.0% | |
CATACATATGCTACAGCTTA+AGG | - | chr4_3:2180336-2180355 | None:intergenic | 35.0% | |
!! | TCTTTGAGATACAAGTCCTA+TGG | - | chr4_3:2180585-2180604 | None:intergenic | 35.0% |
!! | TATTTTTGCTAGGTCAAGCT+CGG | - | chr4_3:2180685-2180704 | None:intergenic | 35.0% |
! | TTAATGGATGAAACCCATCT+CGG | - | chr4_3:2180727-2180746 | None:intergenic | 35.0% |
!! | TTAGGGCATTGTGTACTTAA+TGG | - | chr4_3:2180743-2180762 | None:intergenic | 35.0% |
AGGATATAATATCTCCTCCA+AGG | + | chr4_3:2180860-2180879 | Msa0624200:intron | 35.0% | |
GGATATAATATCTCCTCCAA+GGG | + | chr4_3:2180861-2180880 | Msa0624200:intron | 35.0% | |
AGTATTCTCTATTGTGAAGC+GGG | - | chr4_3:2180889-2180908 | None:intergenic | 35.0% | |
GAGTATTCTCTATTGTGAAG+CGG | - | chr4_3:2180890-2180909 | None:intergenic | 35.0% | |
TAATATCCTAACACCTTGTC+TGG | + | chr4_3:2181050-2181069 | Msa0624200:intron | 35.0% | |
CGAAATAAGGTTCATTTGTG+TGG | - | chr4_3:2181111-2181130 | None:intergenic | 35.0% | |
TTAGAACAACTGTATCATGG+TGG | + | chr4_3:2181155-2181174 | Msa0624200:intron | 35.0% | |
GGTTAATACAAGACAAGTTG+AGG | + | chr4_3:2181176-2181195 | Msa0624200:intron | 35.0% | |
TTGGAACACAAAATCTGATG+AGG | - | chr4_3:2181367-2181386 | None:intergenic | 35.0% | |
! | GCGTGGATAATTTTGTGTTA+CGG | - | chr4_3:2181451-2181470 | None:intergenic | 35.0% |
TAACACAAAATTATCCACGC+TGG | + | chr4_3:2181451-2181470 | Msa0624200:CDS | 35.0% | |
!! | AGCAATTGATGATGTGTCAT+TGG | + | chr4_3:2181526-2181545 | Msa0624200:CDS | 35.0% |
TTAGCATGTGATCCATAACT+CGG | - | chr4_3:2182224-2182243 | None:intergenic | 35.0% | |
ATTAGGAAAGTAAGGAACCT+TGG | + | chr4_3:2182270-2182289 | Msa0624200:intron | 35.0% | |
TATCAAAGTGTGTCTAACCA+AGG | - | chr4_3:2182290-2182309 | None:intergenic | 35.0% | |
!! | GCTTAAGCTTTCTAGCTAAT+TGG | - | chr4_3:2182326-2182345 | None:intergenic | 35.0% |
TTGATCAAATGAGATGCGTT+TGG | + | chr4_3:2182560-2182579 | Msa0624200:intron | 35.0% | |
TCACCAGCTTATAGCATATT+TGG | + | chr4_3:2182597-2182616 | Msa0624200:intron | 35.0% | |
TCTCCAAATATGCTATAAGC+TGG | - | chr4_3:2182603-2182622 | None:intergenic | 35.0% | |
TTAGCATGTGATCCATAACT+CGG | - | chr4_3:2182224-2182243 | None:intergenic | 35.0% | |
ATTAGGAAAGTAAGGAACCT+TGG | + | chr4_3:2182270-2182289 | Msa0624200:intron | 35.0% | |
TATCAAAGTGTGTCTAACCA+AGG | - | chr4_3:2182290-2182309 | None:intergenic | 35.0% | |
!! | GCTTAAGCTTTCTAGCTAAT+TGG | - | chr4_3:2182326-2182345 | None:intergenic | 35.0% |
TTGATCAAATGAGATGCGTT+TGG | + | chr4_3:2182560-2182579 | Msa0624200:intron | 35.0% | |
TCACCAGCTTATAGCATATT+TGG | + | chr4_3:2182597-2182616 | Msa0624200:intron | 35.0% | |
TCTCCAAATATGCTATAAGC+TGG | - | chr4_3:2182603-2182622 | None:intergenic | 35.0% | |
TTAGCATGTGATCCATAACT+CGG | - | chr4_3:2182224-2182243 | None:intergenic | 35.0% | |
ATTAGGAAAGTAAGGAACCT+TGG | + | chr4_3:2182270-2182289 | Msa0624200:intron | 35.0% | |
TATCAAAGTGTGTCTAACCA+AGG | - | chr4_3:2182290-2182309 | None:intergenic | 35.0% | |
!! | GCTTAAGCTTTCTAGCTAAT+TGG | - | chr4_3:2182326-2182345 | None:intergenic | 35.0% |
TTGATCAAATGAGATGCGTT+TGG | + | chr4_3:2182560-2182579 | Msa0624200:intron | 35.0% | |
TCACCAGCTTATAGCATATT+TGG | + | chr4_3:2182597-2182616 | Msa0624200:intron | 35.0% | |
TCTCCAAATATGCTATAAGC+TGG | - | chr4_3:2182603-2182622 | None:intergenic | 35.0% | |
! | GTTGGCTCAAATATGAACAT+TGG | - | chr4_3:2183866-2183885 | None:intergenic | 35.0% |
TAAGCTAAGGGATAAGAAGT+TGG | + | chr4_3:2184003-2184022 | Msa0624200:intron | 35.0% | |
!!! | TAGTTTTTTTCTCCTTCGTC+CGG | - | chr4_3:2184046-2184065 | None:intergenic | 35.0% |
CTTATAGCTGAAAAGCTAGT+AGG | - | chr4_3:2184478-2184497 | None:intergenic | 35.0% | |
AGTCAAAAAATGGCTCCATT+TGG | - | chr4_3:2184539-2184558 | None:intergenic | 35.0% | |
!! | TTATGTTGGCTTGTCTTTGA+GGG | + | chr4_3:2184607-2184626 | Msa0624200:intron | 35.0% |
GATAAGAGTTTATAACGAGG+AGG | + | chr4_3:2184666-2184685 | Msa0624200:intron | 35.0% | |
CTAACTCATCCTTACAAAAG+CGG | - | chr4_3:2184710-2184729 | None:intergenic | 35.0% | |
! | CTACTTTCCATGCTATTTGA+AGG | - | chr4_3:2184936-2184955 | None:intergenic | 35.0% |
! | GACCATTTTCAAATACTGTC+TGG | + | chr4_3:2184977-2184996 | Msa0624200:CDS | 35.0% |
TGCCAGACAGTATTTGAAAA+TGG | - | chr4_3:2184982-2185001 | None:intergenic | 35.0% | |
! | ATTTTCAAATACTGTCTGGC+AGG | + | chr4_3:2184981-2185000 | Msa0624200:CDS | 35.0% |
! | CATCATGTTTCACACTTTTC+AGG | + | chr4_3:2185077-2185096 | Msa0624200:CDS | 35.0% |
AAAGAAAAATCACCTACCTG+TGG | - | chr4_3:2185112-2185131 | None:intergenic | 35.0% | |
AAACTAAGATAGTTCGAGAG+AGG | - | chr4_3:2185372-2185391 | None:intergenic | 35.0% | |
!! | TTCCCTATTTGAGTTGGTTA+TGG | + | chr4_3:2185439-2185458 | Msa0624200:intron | 35.0% |
CTCCATAACCAACTCAAATA+GGG | - | chr4_3:2185444-2185463 | None:intergenic | 35.0% | |
ACTCCATAACCAACTCAAAT+AGG | - | chr4_3:2185445-2185464 | None:intergenic | 35.0% | |
!! | CAAATTTGGTTTGTAACGTG+AGG | + | chr4_3:2185574-2185593 | Msa0624200:intron | 35.0% |
!!! | CCTTACAAGCTAGTTTTGTA+GGG | - | chr4_3:2185768-2185787 | None:intergenic | 35.0% |
!!! | ACCTTACAAGCTAGTTTTGT+AGG | - | chr4_3:2185769-2185788 | None:intergenic | 35.0% |
TGATTGTAAGAGTCCCATAT+TGG | - | chr4_3:2185837-2185856 | None:intergenic | 35.0% | |
CCTCAATTGTCTCTTTCTAT+CGG | + | chr4_3:2186000-2186019 | Msa0624200:intron | 35.0% | |
GCAAAAAAATAACTGGTTGG+TGG | - | chr4_3:2186067-2186086 | None:intergenic | 35.0% | |
TTGATTGTCCTGAGATTTAG+GGG | - | chr4_3:2186144-2186163 | None:intergenic | 35.0% | |
CTTTGATTGTCCTGAGATTT+AGG | - | chr4_3:2186146-2186165 | None:intergenic | 35.0% | |
!!! | ACCATTTTTTTCTTCCCTTG+TGG | + | chr4_3:2186191-2186210 | Msa0624200:intron | 35.0% |
ACCACAAGGGAAGAAAAAAA+TGG | - | chr4_3:2186195-2186214 | None:intergenic | 35.0% | |
ACATGAGTGAAATACCACAA+GGG | - | chr4_3:2186208-2186227 | None:intergenic | 35.0% | |
!! | TTAAGCATTGGAATACGGAT+CGG | - | chr4_3:2186349-2186368 | None:intergenic | 35.0% |
!! | CAGCATTAAGCATTGGAATA+CGG | - | chr4_3:2186354-2186373 | None:intergenic | 35.0% |
! | GACAAGTAAGAGCAATTTTG+AGG | - | chr4_3:2186396-2186415 | None:intergenic | 35.0% |
AAATTGCTCTTACTTGTCCT+AGG | + | chr4_3:2186398-2186417 | Msa0624200:intron | 35.0% | |
CAGATAAAATTTAGGGGAAG+AGG | - | chr4_3:2186427-2186446 | None:intergenic | 35.0% | |
!!! | CTTTTGTTTTTTGCATCCGT+AGG | - | chr4_3:2186474-2186493 | None:intergenic | 35.0% |
CTACGGATGCAAAAAACAAA+AGG | + | chr4_3:2186472-2186491 | Msa0624200:intron | 35.0% | |
CTGCAGTTGGAATAATCAAA+GGG | - | chr4_3:2186517-2186536 | None:intergenic | 35.0% | |
TCTGCAGTTGGAATAATCAA+AGG | - | chr4_3:2186518-2186537 | None:intergenic | 35.0% | |
!!! | AGAAACCTCGTGTTACTTTT+AGG | + | chr4_3:2186617-2186636 | Msa0624200:intron | 35.0% |
! | CTATCTTTTGTAGCTTCTTC+CGG | - | chr4_3:2186652-2186671 | None:intergenic | 35.0% |
GAAAAATCACGATCATTGCA+GGG | - | chr4_3:2186733-2186752 | None:intergenic | 35.0% | |
TGAAAAATCACGATCATTGC+AGG | - | chr4_3:2186734-2186753 | None:intergenic | 35.0% | |
! | ATCGTGATTTTTCACAATCC+TGG | + | chr4_3:2186740-2186759 | Msa0624200:intron | 35.0% |
!! | AGCAGTTGTATTTGCTATTG+TGG | - | chr4_3:2186766-2186785 | None:intergenic | 35.0% |
TCTCGCAGATTCTTACAATT+TGG | + | chr4_3:2186859-2186878 | Msa0624200:intron | 35.0% | |
CTCGCAGATTCTTACAATTT+GGG | + | chr4_3:2186860-2186879 | Msa0624200:intron | 35.0% | |
GCCATATTAGAATTTCGGTT+TGG | + | chr4_3:2187052-2187071 | Msa0624200:intron | 35.0% | |
GCCAAACCGAAATTCTAATA+TGG | - | chr4_3:2187056-2187075 | None:intergenic | 35.0% | |
!! | CCTGAAAAGTGTTTAAAGGA+GGG | - | chr4_3:2187123-2187142 | None:intergenic | 35.0% |
!! | ACCTGAAAAGTGTTTAAAGG+AGG | - | chr4_3:2187124-2187143 | None:intergenic | 35.0% |
!! | TCTCAATAAACTGGCTTGTA+AGG | + | chr4_3:2187281-2187300 | Msa0624200:intron | 35.0% |
!! | TTTGAAAAAGTGTTCGCTAG+TGG | - | chr4_3:2187320-2187339 | None:intergenic | 35.0% |
TAATGACAGAAGGATGTGAA+AGG | - | chr4_3:2187493-2187512 | None:intergenic | 35.0% | |
TCCAAGAGATTGATAGAAGA+TGG | + | chr4_3:2187644-2187663 | Msa0624200:CDS | 35.0% | |
TCCATCTTCTATCAATCTCT+TGG | - | chr4_3:2187648-2187667 | None:intergenic | 35.0% | |
TTCATGAAGATTGCTTCTTG+TGG | + | chr4_3:2187746-2187765 | Msa0624200:CDS | 35.0% | |
TCATGAAGATTGCTTCTTGT+GGG | + | chr4_3:2187747-2187766 | Msa0624200:CDS | 35.0% | |
CTCATACTATGTGTCTCATT+TGG | + | chr4_3:2187840-2187859 | Msa0624200:intron | 35.0% | |
CTCATATTCTATGTCTCGTT+TGG | - | chr4_3:2188078-2188097 | None:intergenic | 35.0% | |
AGACATAGAATATGAGACAG+AGG | + | chr4_3:2188082-2188101 | Msa0624200:intron | 35.0% | |
! | TAGTTTGAGGCTTATGTGAT+CGG | + | chr4_3:2188234-2188253 | Msa0624200:intron | 35.0% |
CAATGCTTCTTAGAATCTCA+AGG | - | chr4_3:2188453-2188472 | None:intergenic | 35.0% | |
!! | TGAGATTCTAAGAAGCATTG+CGG | + | chr4_3:2188453-2188472 | Msa0624200:CDS | 35.0% |
TTCAATCCATTTAGGTGACA+TGG | - | chr4_3:2188584-2188603 | None:intergenic | 35.0% | |
!! | ATGTCACCTAAATGGATTGA+AGG | + | chr4_3:2188583-2188602 | Msa0624200:CDS | 35.0% |
GATCCATTGAAAGTAGTTTG+TGG | - | chr4_3:2188768-2188787 | None:intergenic | 35.0% | |
ATGGATCATATATACGGGTA+AGG | + | chr4_3:2188781-2188800 | Msa0624200:intron | 35.0% | |
GGACAGTATTTACATAACCA+AGG | + | chr4_3:2188925-2188944 | Msa0624200:intron | 35.0% | |
TTACATAACCAAGGTTGAGA+TGG | + | chr4_3:2188934-2188953 | Msa0624200:intron | 35.0% | |
! | ACTATGATTTTCCCCTTTTC+TGG | + | chr4_3:2188971-2188990 | Msa0624200:intron | 35.0% |
TATGGGATCATTTAATGCGT+TGG | - | chr4_3:2189044-2189063 | None:intergenic | 35.0% | |
! | TTAGGTTGTTTGTGCATGTA+TGG | - | chr4_3:2189191-2189210 | None:intergenic | 35.0% |
TATATCTTACCTTCCCAAAC+GGG | - | chr4_3:2189700-2189719 | None:intergenic | 35.0% | |
TCCATCATTGGAAATTCTTC+AGG | + | chr4_3:2189779-2189798 | Msa0624200:intron | 35.0% | |
TCCTGAAGAATTTCCAATGA+TGG | - | chr4_3:2189783-2189802 | None:intergenic | 35.0% | |
GCAACTTTGACTGGAAATTA+AGG | - | chr4_3:2189855-2189874 | None:intergenic | 35.0% | |
AAAGTTGCCTAGGTTGTATT+GGG | + | chr4_3:2189867-2189886 | Msa0624200:CDS | 35.0% | |
CTATAATCCCAATACAACCT+AGG | - | chr4_3:2189877-2189896 | None:intergenic | 35.0% | |
GGATTATAGATTCACAAAGG+AGG | + | chr4_3:2189888-2189907 | Msa0624200:CDS | 35.0% | |
TATAGATTCACAAAGGAGGA+TGG | + | chr4_3:2189892-2189911 | Msa0624200:CDS | 35.0% | |
ATAGATTCACAAAGGAGGAT+GGG | + | chr4_3:2189893-2189912 | Msa0624200:CDS | 35.0% | |
!!! | GTCACACAATTCACCGATTT+TGG | + | chr4_3:2176098-2176117 | Msa0624200:five_prime_UTR | 40.0% |
GTTTCAACTTGACACAGTGA+TGG | + | chr4_3:2176125-2176144 | Msa0624200:exon | 40.0% | |
CCAAGTGAAAAGACAAATCC+AGG | - | chr4_3:2176353-2176372 | None:intergenic | 40.0% | |
! | CCTGGATTTGTCTTTTCACT+TGG | + | chr4_3:2176350-2176369 | Msa0624200:intron | 40.0% |
ATCGAGTAGTATGAGATGCT+CGG | + | chr4_3:2176710-2176729 | Msa0624200:intron | 40.0% | |
!! | GACAAGTATCGAAACACTTG+GGG | - | chr4_3:2176795-2176814 | None:intergenic | 40.0% |
TTAGTATCAGACATGGTTGC+TGG | + | chr4_3:2176817-2176836 | Msa0624200:intron | 40.0% | |
CATCCCATAACACTCAATGT+GGG | - | chr4_3:2176955-2176974 | None:intergenic | 40.0% | |
ACATCCCATAACACTCAATG+TGG | - | chr4_3:2176956-2176975 | None:intergenic | 40.0% | |
! | TGTTCGGTGGAGTATTTAAG+TGG | + | chr4_3:2176973-2176992 | Msa0624200:intron | 40.0% |
! | GTTCGGTGGAGTATTTAAGT+GGG | + | chr4_3:2176974-2176993 | Msa0624200:intron | 40.0% |
ACTAGAGAAATGGCATCAAG+TGG | - | chr4_3:2177427-2177446 | None:intergenic | 40.0% | |
! | CAGATATCCAAAGCCTTTTC+TGG | - | chr4_3:2177456-2177475 | None:intergenic | 40.0% |
GTGGTTTACTTGGATACCTA+TGG | + | chr4_3:2177495-2177514 | Msa0624200:intron | 40.0% | |
!! | AACGAGAAAAGGAGCACTTT+CGG | - | chr4_3:2177671-2177690 | None:intergenic | 40.0% |
! | GCGTCTAGTGATTTGAAATG+GGG | - | chr4_3:2178020-2178039 | None:intergenic | 40.0% |
!! | CGTATGCAAAAGGGTATCTT+AGG | + | chr4_3:2178127-2178146 | Msa0624200:intron | 40.0% |
GTGCTTATAAATAGGGATGG+AGG | + | chr4_3:2178222-2178241 | Msa0624200:intron | 40.0% | |
CACATTAATGGGGAGATTGT+AGG | + | chr4_3:2178544-2178563 | Msa0624200:CDS | 40.0% | |
ATACATTTGGCCAACCTTTG+TGG | + | chr4_3:2178625-2178644 | Msa0624200:CDS | 40.0% | |
GAGGTTGAAGAAGAAAGTGA+TGG | + | chr4_3:2178912-2178931 | Msa0624200:CDS | 40.0% | |
! | GAAGAAAGTGATGGTGTTTG+GGG | + | chr4_3:2178921-2178940 | Msa0624200:CDS | 40.0% |
! | ACCCTAGACCTTTTAGATCA+TGG | - | chr4_3:2179031-2179050 | None:intergenic | 40.0% |
CAGTGAGTAACCCAATAAAG+TGG | - | chr4_3:2179192-2179211 | None:intergenic | 40.0% | |
CATAGTAAAGAACAGGGTGA+AGG | - | chr4_3:2179317-2179336 | None:intergenic | 40.0% | |
CTTCACCCTGTTCTTTACTA+TGG | + | chr4_3:2179315-2179334 | Msa0624200:intron | 40.0% | |
ATTTGGACAGCCTGTTGATA+TGG | + | chr4_3:2179492-2179511 | Msa0624200:CDS | 40.0% | |
ACCTCATTCTCCATATCAAC+AGG | - | chr4_3:2179505-2179524 | None:intergenic | 40.0% | |
ATGAGGTTTATAGTCCTCCT+TGG | + | chr4_3:2179518-2179537 | Msa0624200:intron | 40.0% | |
GTTAAGGCTCTCTACTTGAA+AGG | + | chr4_3:2179556-2179575 | Msa0624200:intron | 40.0% | |
CTCTCTACTTGAAAGGAAGT+TGG | + | chr4_3:2179563-2179582 | Msa0624200:intron | 40.0% | |
TTCACTTGTGTATGCTGACA+CGG | + | chr4_3:2179634-2179653 | Msa0624200:CDS | 40.0% | |
TCATCAGTTGTATTCTCGAC+TGG | - | chr4_3:2179665-2179684 | None:intergenic | 40.0% | |
CCATCATAGCTAGACAAAAG+GGG | - | chr4_3:2179695-2179714 | None:intergenic | 40.0% | |
! | CAAAACCGGCTTATAAAGTG+AGG | + | chr4_3:2179913-2179932 | Msa0624200:intron | 40.0% |
GTAGTCCTCACTTTATAAGC+CGG | - | chr4_3:2179921-2179940 | None:intergenic | 40.0% | |
CTACCCCGACTTATAAACAT+AGG | + | chr4_3:2179937-2179956 | Msa0624200:intron | 40.0% | |
TGGGCCTATGTTTATAAGTC+GGG | - | chr4_3:2179944-2179963 | None:intergenic | 40.0% | |
CTGGGCCTATGTTTATAAGT+CGG | - | chr4_3:2179945-2179964 | None:intergenic | 40.0% | |
TGGTCCAACATATCTTGGAT+AGG | + | chr4_3:2180048-2180067 | Msa0624200:intron | 40.0% | |
AGAGCCTATCCAAGATATGT+TGG | - | chr4_3:2180055-2180074 | None:intergenic | 40.0% | |
! | TAAAACTGGCTTATAAGGCG+TGG | + | chr4_3:2180116-2180135 | Msa0624200:intron | 40.0% |
AACCCACATTGGATGAGATA+AGG | - | chr4_3:2180172-2180191 | None:intergenic | 40.0% | |
TTAAATGATCATGGGGTCCT+AGG | - | chr4_3:2180392-2180411 | None:intergenic | 40.0% | |
!! | ATGTTTGCTGGGTTGATCTT+TGG | + | chr4_3:2180417-2180436 | Msa0624200:intron | 40.0% |
!!! | GGGGATCTTTTCTAGTTTCT+AGG | + | chr4_3:2180469-2180488 | Msa0624200:intron | 40.0% |
GTGGTCGATTATCATGCTTT+GGG | - | chr4_3:2180663-2180682 | None:intergenic | 40.0% | |
! | TTTTTACTCTTCCCCGAGAT+GGG | + | chr4_3:2180711-2180730 | Msa0624200:intron | 40.0% |
! | TAATGGATGAAACCCATCTC+GGG | - | chr4_3:2180726-2180745 | None:intergenic | 40.0% |
AAGTACACAATGCCCTAAAC+TGG | + | chr4_3:2180745-2180764 | Msa0624200:intron | 40.0% | |
GTGATAGGAGATCCAGTTTA+GGG | - | chr4_3:2180760-2180779 | None:intergenic | 40.0% | |
TGTGATAGGAGATCCAGTTT+AGG | - | chr4_3:2180761-2180780 | None:intergenic | 40.0% | |
GATGCTAGTGATACTGTGAT+AGG | - | chr4_3:2180775-2180794 | None:intergenic | 40.0% | |
! | TCTAATCCAGACAAGGTGTT+AGG | - | chr4_3:2181059-2181078 | None:intergenic | 40.0% |
CTGATGGAGCAAGAGAATAA+TGG | - | chr4_3:2181293-2181312 | None:intergenic | 40.0% | |
AAAGGAACAACGGTTACTGA+TGG | - | chr4_3:2181309-2181328 | None:intergenic | 40.0% | |
AAAGCTGGCAAAAGGAACAA+CGG | - | chr4_3:2181319-2181338 | None:intergenic | 40.0% | |
TATCACACTTGGATGAAAGC+TGG | - | chr4_3:2181334-2181353 | None:intergenic | 40.0% | |
TTTCATCCAAGTGTGATAGC+AGG | + | chr4_3:2181336-2181355 | Msa0624200:CDS | 40.0% | |
! | TAATTTTGTGTTACGGCTCC+TGG | - | chr4_3:2181444-2181463 | None:intergenic | 40.0% |
CTCTAAACCTCTTCATCAGT+GGG | - | chr4_3:2181586-2181605 | None:intergenic | 40.0% | |
ACTCTAAACCTCTTCATCAG+TGG | - | chr4_3:2181587-2181606 | None:intergenic | 40.0% | |
! | CTGATGAAGAGGTTTAGAGT+TGG | + | chr4_3:2181587-2181606 | Msa0624200:CDS | 40.0% |
TTCTACCCCAGATTGCTTTA+TGG | - | chr4_3:2181651-2181670 | None:intergenic | 40.0% | |
! | TCATGTATGGACTGCTAATC+AGG | + | chr4_3:2181682-2181701 | Msa0624200:CDS | 40.0% |
AAAGCAACAACCTACTGAGT+AGG | - | chr4_3:2181813-2181832 | None:intergenic | 40.0% | |
TAATTCTCTCCAGACAATCG+AGG | + | chr4_3:2182040-2182059 | Msa0624200:intron | 40.0% | |
! | CATGCTCGATTTGATGTTCT+TGG | - | chr4_3:2183833-2183852 | None:intergenic | 40.0% |
AACATCAAATCGAGCATGTC+TGG | + | chr4_3:2183835-2183854 | Msa0624200:intron | 40.0% | |
TGAAATTTCACACCCCGTAT+CGG | + | chr4_3:2183895-2183914 | Msa0624200:intron | 40.0% | |
TTGATTGTGCAGAACCGATA+CGG | - | chr4_3:2183912-2183931 | None:intergenic | 40.0% | |
! | ATTATATGTAGTGGGGGGTT+GGG | + | chr4_3:2183966-2183985 | Msa0624200:intron | 40.0% |
! | AGCTCAACTGGTTTAAGCTA+AGG | + | chr4_3:2183990-2184009 | Msa0624200:intron | 40.0% |
! | GCTCAACTGGTTTAAGCTAA+GGG | + | chr4_3:2183991-2184010 | Msa0624200:intron | 40.0% |
GATAAGAAGTTGGAGGTCTT+GGG | + | chr4_3:2184013-2184032 | Msa0624200:intron | 40.0% | |
!!! | AGTTTTTTTCTCCTTCGTCC+GGG | - | chr4_3:2184045-2184064 | None:intergenic | 40.0% |
CGTAATGGTTCAAGTCTTCA+AGG | - | chr4_3:2184319-2184338 | None:intergenic | 40.0% | |
AAGCCAACATAAGGCAACTA+GGG | - | chr4_3:2184599-2184618 | None:intergenic | 40.0% | |
CTCAAAGACAAGCCAACATA+AGG | - | chr4_3:2184608-2184627 | None:intergenic | 40.0% | |
!! | CTTATGTTGGCTTGTCTTTG+AGG | + | chr4_3:2184606-2184625 | Msa0624200:intron | 40.0% |
!! | TATGTTGGCTTGTCTTTGAG+GGG | + | chr4_3:2184608-2184627 | Msa0624200:intron | 40.0% |
! | CGCTTTTGTAAGGATGAGTT+AGG | + | chr4_3:2184708-2184727 | Msa0624200:intron | 40.0% |
! | GAATGGGTTTCCAAAAAGCT+TGG | + | chr4_3:2184833-2184852 | Msa0624200:CDS | 40.0% |
GTACTCTCTGATGATTCAGA+TGG | - | chr4_3:2184897-2184916 | None:intergenic | 40.0% | |
! | TCTGAATCATCAGAGAGTAC+AGG | + | chr4_3:2184897-2184916 | Msa0624200:CDS | 40.0% |
! | CTGAATCATCAGAGAGTACA+GGG | + | chr4_3:2184898-2184917 | Msa0624200:CDS | 40.0% |
! | TGAATCATCAGAGAGTACAG+GGG | + | chr4_3:2184899-2184918 | Msa0624200:CDS | 40.0% |
! | TTCTTTGTCTGAAGCAGAGA+TGG | - | chr4_3:2185042-2185061 | None:intergenic | 40.0% |
AAAAATCACCTACCTGTGGT+GGG | - | chr4_3:2185108-2185127 | None:intergenic | 40.0% | |
AATTGCGTTAGTGCCAAATG+AGG | + | chr4_3:2185146-2185165 | Msa0624200:intron | 40.0% | |
TGCCAAATGAGGATGATAGT+TGG | + | chr4_3:2185157-2185176 | Msa0624200:intron | 40.0% | |
GTCCAACTATCATCCTCATT+TGG | - | chr4_3:2185162-2185181 | None:intergenic | 40.0% | |
!! | ATTTGGTTTGTAACGTGAGG+AGG | + | chr4_3:2185577-2185596 | Msa0624200:intron | 40.0% |
! | TGGGACTTTTAACATACCTC+TGG | + | chr4_3:2185653-2185672 | Msa0624200:intron | 40.0% |
TGACTTGAATGGTCCAATAG+CGG | + | chr4_3:2185680-2185699 | Msa0624200:intron | 40.0% | |
! | CCCTACAAAACTAGCTTGTA+AGG | + | chr4_3:2185765-2185784 | Msa0624200:intron | 40.0% |
AGCAGAGTTTCAGAAGTTCA+GGG | - | chr4_3:2185915-2185934 | None:intergenic | 40.0% | |
TAGCAGAGTTTCAGAAGTTC+AGG | - | chr4_3:2185916-2185935 | None:intergenic | 40.0% | |
CAATTGAGGAGTTCGAAAAC+CGG | - | chr4_3:2185989-2186008 | None:intergenic | 40.0% | |
CCGATAGAAAGAGACAATTG+AGG | - | chr4_3:2186003-2186022 | None:intergenic | 40.0% | |
!! | AATAACTGGTTGGTGGCAAA+TGG | - | chr4_3:2186060-2186079 | None:intergenic | 40.0% |
TCAGAGGAGAGCTATTCTAA+TGG | - | chr4_3:2186112-2186131 | None:intergenic | 40.0% | |
CACATGAGTGAAATACCACA+AGG | - | chr4_3:2186209-2186228 | None:intergenic | 40.0% | |
GTTGTGCAACAAGTGACTAA+AGG | - | chr4_3:2186271-2186290 | None:intergenic | 40.0% | |
TACTTGGCAGCATTAAGCAT+TGG | - | chr4_3:2186361-2186380 | None:intergenic | 40.0% | |
TGATTATTCCAACTGCAGAC+TGG | + | chr4_3:2186519-2186538 | Msa0624200:intron | 40.0% | |
GGTTTCTGTTGATCTAGTAC+AGG | - | chr4_3:2186604-2186623 | None:intergenic | 40.0% | |
!! | TACTTTTAGGAAGCCATGTC+CGG | + | chr4_3:2186630-2186649 | Msa0624200:intron | 40.0% |
CGGAAGAAGCTACAAAAGAT+AGG | + | chr4_3:2186650-2186669 | Msa0624200:intron | 40.0% | |
GTTCCACGAATAACACAACA+CGG | + | chr4_3:2186672-2186691 | Msa0624200:intron | 40.0% | |
TTCCACGAATAACACAACAC+GGG | + | chr4_3:2186673-2186692 | Msa0624200:intron | 40.0% | |
! | ACAACACGGGGGTATATATT+GGG | + | chr4_3:2186686-2186705 | Msa0624200:intron | 40.0% |
TTGCAGGGCTATTCTTCAAA+TGG | - | chr4_3:2186718-2186737 | None:intergenic | 40.0% | |
!! | TTGTATTTGCTATTGTGGCC+AGG | - | chr4_3:2186761-2186780 | None:intergenic | 40.0% |
GTGCATTATAGCATTCACAG+AGG | - | chr4_3:2186815-2186834 | None:intergenic | 40.0% | |
GAGTGATAAGACTGTCTCAT+TGG | - | chr4_3:2186957-2186976 | None:intergenic | 40.0% | |
AATGCTAAATCTTGGACGTG+AGG | - | chr4_3:2186982-2187001 | None:intergenic | 40.0% | |
CACGTCCAAGATTTAGCATT+TGG | + | chr4_3:2186982-2187001 | Msa0624200:intron | 40.0% | |
!! | CTCTATAACACCGACTTGTA+AGG | + | chr4_3:2187085-2187104 | Msa0624200:intron | 40.0% |
!! | TATAACACCGACTTGTAAGG+TGG | + | chr4_3:2187088-2187107 | Msa0624200:intron | 40.0% |
ACATCTACCACCTTACAAGT+CGG | - | chr4_3:2187098-2187117 | None:intergenic | 40.0% | |
! | CCCTCCTTTAAACACTTTTC+AGG | + | chr4_3:2187120-2187139 | Msa0624200:intron | 40.0% |
AGGTCATATCACATCCAATG+TGG | + | chr4_3:2187140-2187159 | Msa0624200:intron | 40.0% | |
ATGTCGTGTCACCCATTATA+GGG | - | chr4_3:2187224-2187243 | None:intergenic | 40.0% | |
TATGTCGTGTCACCCATTAT+AGG | - | chr4_3:2187225-2187244 | None:intergenic | 40.0% | |
!! | ATAAACTGGCTTGTAAGGTG+AGG | + | chr4_3:2187286-2187305 | Msa0624200:intron | 40.0% |
!! | TAAACTGGCTTGTAAGGTGA+GGG | + | chr4_3:2187287-2187306 | Msa0624200:intron | 40.0% |
!! | AAAAAGTGTTCGCTAGTGGA+AGG | - | chr4_3:2187316-2187335 | None:intergenic | 40.0% |
CTGGGTAATTCCAATAAACG+CGG | - | chr4_3:2187570-2187589 | None:intergenic | 40.0% | |
AGATGGAACTAATCTTTGGC+TGG | + | chr4_3:2187661-2187680 | Msa0624200:CDS | 40.0% | |
GACACATAGTATGAGACAGA+GGG | - | chr4_3:2187835-2187854 | None:intergenic | 40.0% | |
AGACACATAGTATGAGACAG+AGG | - | chr4_3:2187836-2187855 | None:intergenic | 40.0% | |
! | AGTTTGAGGCTTATGTGATC+GGG | + | chr4_3:2188235-2188254 | Msa0624200:intron | 40.0% |
!! | GAGATTCTAAGAAGCATTGC+GGG | + | chr4_3:2188454-2188473 | Msa0624200:CDS | 40.0% |
! | ACTTTGAGAAGTTATGGTGC+TGG | + | chr4_3:2188503-2188522 | Msa0624200:CDS | 40.0% |
TGGATATTACACACGCTACA+GGG | - | chr4_3:2188534-2188553 | None:intergenic | 40.0% | |
TGTAGCGTGTGTAATATCCA+GGG | + | chr4_3:2188534-2188553 | Msa0624200:CDS | 40.0% | |
GGAATTCCATGTCACCTAAA+TGG | + | chr4_3:2188575-2188594 | Msa0624200:CDS | 40.0% | |
GATTGAAGGATTCATCACCA+AGG | + | chr4_3:2188597-2188616 | Msa0624200:CDS | 40.0% | |
TCGCCACAAACTACTTTCAA+TGG | + | chr4_3:2188762-2188781 | Msa0624200:CDS | 40.0% | |
CCTAAATACCATCTCAACCT+TGG | - | chr4_3:2188945-2188964 | None:intergenic | 40.0% | |
CCAAGGTTGAGATGGTATTT+AGG | + | chr4_3:2188942-2188961 | Msa0624200:intron | 40.0% | |
ATCTATGTGGGAGCTACAAT+CGG | + | chr4_3:2189383-2189402 | Msa0624200:intron | 40.0% | |
ACCATTGCAAGATATGCTAC+TGG | + | chr4_3:2189659-2189678 | Msa0624200:CDS | 40.0% | |
GCACACTTGCATTTGCATTA+CGG | + | chr4_3:2189820-2189839 | Msa0624200:intron | 40.0% | |
ATTTCCAGTCAAAGTTGCCT+AGG | + | chr4_3:2189857-2189876 | Msa0624200:CDS | 40.0% | |
CAAAGTTGCCTAGGTTGTAT+TGG | + | chr4_3:2189866-2189885 | Msa0624200:CDS | 40.0% | |
AAGAATGGTGGTAGGGAATG+TGG | - | chr4_3:2176268-2176287 | None:intergenic | 45.0% | |
CCTGATGAAGAATGGTGGTA+GGG | - | chr4_3:2176275-2176294 | None:intergenic | 45.0% | |
ACCTGATGAAGAATGGTGGT+AGG | - | chr4_3:2176276-2176295 | None:intergenic | 45.0% | |
! | TGCTCGGTGGAGTATTTAAG+TGG | + | chr4_3:2176726-2176745 | Msa0624200:intron | 45.0% |
!! | GAGTGCAGTTGATGAGATGT+CGG | + | chr4_3:2176870-2176889 | Msa0624200:intron | 45.0% |
CAATGTGGGATTTGGACAGT+TGG | - | chr4_3:2176941-2176960 | None:intergenic | 45.0% | |
!! | AGGGAGTGTTCTTGAAGTGT+CGG | + | chr4_3:2177027-2177046 | Msa0624200:intron | 45.0% |
AGAGAAATGGCATCAAGTGG+TGG | - | chr4_3:2177424-2177443 | None:intergenic | 45.0% | |
! | AGAAGCTCCTGTTACTTGCA+TGG | + | chr4_3:2177741-2177760 | Msa0624200:CDS | 45.0% |
! | GAAGCTCCTGTTACTTGCAT+GGG | + | chr4_3:2177742-2177761 | Msa0624200:CDS | 45.0% |
ACATGTGGAACTTCTGTCCA+AGG | - | chr4_3:2177769-2177788 | None:intergenic | 45.0% | |
ATGGGTTCATGTTGGATGTG+AGG | + | chr4_3:2177819-2177838 | Msa0624200:CDS | 45.0% | |
AGCACAAGCTAATCCTCAAG+TGG | - | chr4_3:2177857-2177876 | None:intergenic | 45.0% | |
ACTACTGTCTCCACAAAGGT+TGG | - | chr4_3:2178638-2178657 | None:intergenic | 45.0% | |
AACCTTTGTGGAGACAGTAG+TGG | + | chr4_3:2178637-2178656 | Msa0624200:CDS | 45.0% | |
GCCTTTGCATAATTTGGCAC+AGG | + | chr4_3:2179423-2179442 | Msa0624200:intron | 45.0% | |
GCCTGTGCCAAATTATGCAA+AGG | - | chr4_3:2179427-2179446 | None:intergenic | 45.0% | |
GCCTGTTGATATGGAGAATG+AGG | + | chr4_3:2179501-2179520 | Msa0624200:CDS | 45.0% | |
TCACTTGTGTATGCTGACAC+GGG | + | chr4_3:2179635-2179654 | Msa0624200:CDS | 45.0% | |
! | CCCCTTTTGTCTAGCTATGA+TGG | + | chr4_3:2179692-2179711 | Msa0624200:CDS | 45.0% |
GTCGTGCATCATTTAAGCTC+AGG | + | chr4_3:2179759-2179778 | Msa0624200:CDS | 45.0% | |
CTCACTCAGCCTTACAAAAC+CGG | + | chr4_3:2179899-2179918 | Msa0624200:intron | 45.0% | |
GGGCCTATGTTTATAAGTCG+GGG | - | chr4_3:2179943-2179962 | None:intergenic | 45.0% | |
CGACTTATAAACATAGGCCC+AGG | + | chr4_3:2179943-2179962 | Msa0624200:intron | 45.0% | |
ACACTCTAGATGTTGCGTCA+GGG | - | chr4_3:2180005-2180024 | None:intergenic | 45.0% | |
! | AGGCCTTATCTCATCCAATG+TGG | + | chr4_3:2180166-2180185 | Msa0624200:intron | 45.0% |
! | GGCCTTATCTCATCCAATGT+GGG | + | chr4_3:2180167-2180186 | Msa0624200:intron | 45.0% |
TGCTACAGCTTAAGGGGAAA+TGG | - | chr4_3:2180328-2180347 | None:intergenic | 45.0% | |
!! | AGATGTCTTGATGATGCCAG+AGG | + | chr4_3:2180447-2180466 | Msa0624200:intron | 45.0% |
!! | GATGTCTTGATGATGCCAGA+GGG | + | chr4_3:2180448-2180467 | Msa0624200:intron | 45.0% |
!! | ATGTCTTGATGATGCCAGAG+GGG | + | chr4_3:2180449-2180468 | Msa0624200:intron | 45.0% |
AACTAGAAAAGATCCCCCTC+TGG | - | chr4_3:2180466-2180485 | None:intergenic | 45.0% | |
GGTGGTCGATTATCATGCTT+TGG | - | chr4_3:2180664-2180683 | None:intergenic | 45.0% | |
! | CTTTTTACTCTTCCCCGAGA+TGG | + | chr4_3:2180710-2180729 | Msa0624200:intron | 45.0% |
AATGGATGAAACCCATCTCG+GGG | - | chr4_3:2180725-2180744 | None:intergenic | 45.0% | |
CTTGGATGAAAGCTGGCAAA+AGG | - | chr4_3:2181327-2181346 | None:intergenic | 45.0% | |
GAACAACCTGCTATCACACT+TGG | - | chr4_3:2181345-2181364 | None:intergenic | 45.0% | |
CAAAATTATCCACGCTGGTG+TGG | + | chr4_3:2181456-2181475 | Msa0624200:CDS | 45.0% | |
!!! | GTGGGTTGGTTTTTTCTTCG+TGG | - | chr4_3:2181568-2181587 | None:intergenic | 45.0% |
AAACCAACCCACTGATGAAG+AGG | + | chr4_3:2181576-2181595 | Msa0624200:CDS | 45.0% | |
AAACCTCTTCATCAGTGGGT+TGG | - | chr4_3:2181582-2181601 | None:intergenic | 45.0% | |
! | AGATTGCTTTATGGTGGGGT+TGG | - | chr4_3:2181642-2181661 | None:intergenic | 45.0% |
AACCCCACCATAAAGCAATC+TGG | + | chr4_3:2181641-2181660 | Msa0624200:CDS | 45.0% | |
ACCCCACCATAAAGCAATCT+GGG | + | chr4_3:2181642-2181661 | Msa0624200:CDS | 45.0% | |
ACCCCAGATTGCTTTATGGT+GGG | - | chr4_3:2181647-2181666 | None:intergenic | 45.0% | |
TACCCCAGATTGCTTTATGG+TGG | - | chr4_3:2181648-2181667 | None:intergenic | 45.0% | |
CCATTCATAGGTCTTCCCAT+AGG | - | chr4_3:2182169-2182188 | None:intergenic | 45.0% | |
CCTATGGGAAGACCTATGAA+TGG | + | chr4_3:2182166-2182185 | Msa0624200:intron | 45.0% | |
GCTAGAAAGCTTAAGCGCTT+AGG | + | chr4_3:2182330-2182349 | Msa0624200:intron | 45.0% | |
AAGCGCTTAGGAAGATGTCT+TGG | + | chr4_3:2182342-2182361 | Msa0624200:intron | 45.0% | |
AGCGCTTAGGAAGATGTCTT+GGG | + | chr4_3:2182343-2182362 | Msa0624200:intron | 45.0% | |
GCTAGAAAGCTTAAGCGCTT+AGG | + | chr4_3:2182330-2182349 | Msa0624200:intron | 45.0% | |
AAGCGCTTAGGAAGATGTCT+TGG | + | chr4_3:2182342-2182361 | Msa0624200:intron | 45.0% | |
AGCGCTTAGGAAGATGTCTT+GGG | + | chr4_3:2182343-2182362 | Msa0624200:intron | 45.0% | |
GCTAGAAAGCTTAAGCGCTT+AGG | + | chr4_3:2182330-2182349 | Msa0624200:intron | 45.0% | |
AAGCGCTTAGGAAGATGTCT+TGG | + | chr4_3:2182342-2182361 | Msa0624200:intron | 45.0% | |
AGCGCTTAGGAAGATGTCTT+GGG | + | chr4_3:2182343-2182362 | Msa0624200:intron | 45.0% | |
TGATTGTGCAGAACCGATAC+GGG | - | chr4_3:2183911-2183930 | None:intergenic | 45.0% | |
! | CATTATATGTAGTGGGGGGT+TGG | + | chr4_3:2183965-2183984 | Msa0624200:intron | 45.0% |
GCTAAGGGATAAGAAGTTGG+AGG | + | chr4_3:2184006-2184025 | Msa0624200:intron | 45.0% | |
GGATAAGAAGTTGGAGGTCT+TGG | + | chr4_3:2184012-2184031 | Msa0624200:intron | 45.0% | |
ACCATTACGAGCAAGAAGTG+AGG | + | chr4_3:2184330-2184349 | Msa0624200:intron | 45.0% | |
TCCTCACTTCTTGCTCGTAA+TGG | - | chr4_3:2184334-2184353 | None:intergenic | 45.0% | |
AGCCAACATAAGGCAACTAG+GGG | - | chr4_3:2184598-2184617 | None:intergenic | 45.0% | |
CAAGCCAACATAAGGCAACT+AGG | - | chr4_3:2184600-2184619 | None:intergenic | 45.0% | |
!! | ATGTTGGCTTGTCTTTGAGG+GGG | + | chr4_3:2184609-2184628 | Msa0624200:intron | 45.0% |
TTAGTCCCACACGGTTAGAT+AGG | + | chr4_3:2184637-2184656 | Msa0624200:intron | 45.0% | |
CCTTACAAAAGCGGCTTGTA+AGG | - | chr4_3:2184701-2184720 | None:intergenic | 45.0% | |
!!! | CCTTACAAGCCGCTTTTGTA+AGG | + | chr4_3:2184698-2184717 | Msa0624200:intron | 45.0% |
GGGTTTCCAAAAAGCTTGGA+TGG | + | chr4_3:2184837-2184856 | Msa0624200:CDS | 45.0% | |
GAAAAATCACCTACCTGTGG+TGG | - | chr4_3:2185109-2185128 | None:intergenic | 45.0% | |
CAAATTTGTAGGGCTGAGTC+AGG | - | chr4_3:2185562-2185581 | None:intergenic | 45.0% | |
CTGACTCAGCCCTACAAATT+TGG | + | chr4_3:2185560-2185579 | Msa0624200:intron | 45.0% | |
GACTTGAATGGTCCAATAGC+GGG | + | chr4_3:2185681-2185700 | Msa0624200:intron | 45.0% | |
GGTTCCAATGGTTCGTAGAT+AGG | + | chr4_3:2185702-2185721 | Msa0624200:intron | 45.0% | |
AGAGCCTATCTACGAACCAT+TGG | - | chr4_3:2185709-2185728 | None:intergenic | 45.0% | |
GAGAGCTATTCTAATGGTGG+TGG | - | chr4_3:2186106-2186125 | None:intergenic | 45.0% | |
GAGGAGAGCTATTCTAATGG+TGG | - | chr4_3:2186109-2186128 | None:intergenic | 45.0% | |
TGTGAACCAACAGACTCACA+TGG | + | chr4_3:2186225-2186244 | Msa0624200:intron | 45.0% | |
TGCTTAATGCTGCCAAGTAG+AGG | + | chr4_3:2186362-2186381 | Msa0624200:intron | 45.0% | |
GAGGGAGAAAAACCTCTACT+TGG | - | chr4_3:2186377-2186396 | None:intergenic | 45.0% | |
GCTGTGAATCATCCTGCAAT+GGG | - | chr4_3:2186556-2186575 | None:intergenic | 45.0% | |
AGCTGTGAATCATCCTGCAA+TGG | - | chr4_3:2186557-2186576 | None:intergenic | 45.0% | |
AGCTATCCCAGCTGTTGAAT+GGG | + | chr4_3:2186573-2186592 | Msa0624200:intron | 45.0% | |
GGCTTCCTAAAAGTAACACG+AGG | - | chr4_3:2186625-2186644 | None:intergenic | 45.0% | |
TTTGTAGCTTCTTCCGGACA+TGG | - | chr4_3:2186646-2186665 | None:intergenic | 45.0% | |
TCCACGAATAACACAACACG+GGG | + | chr4_3:2186674-2186693 | Msa0624200:intron | 45.0% | |
! | CACAACACGGGGGTATATAT+TGG | + | chr4_3:2186685-2186704 | Msa0624200:intron | 45.0% |
!! | CGGGGGTATATATTGGGTTT+TGG | + | chr4_3:2186692-2186711 | Msa0624200:intron | 45.0% |
ATAGCATTCACAGAGGTCTG+TGG | - | chr4_3:2186808-2186827 | None:intergenic | 45.0% | |
CATCATAAAACCTGCTTGCG+AGG | + | chr4_3:2186898-2186917 | Msa0624200:intron | 45.0% | |
TGGATGTGACATGGCATGAA+AGG | - | chr4_3:2186937-2186956 | None:intergenic | 45.0% | |
CTGTCTCATTGGATGTGACA+TGG | - | chr4_3:2186946-2186965 | None:intergenic | 45.0% | |
TTGGATTGTGACCCGATGAT+AGG | + | chr4_3:2187001-2187020 | Msa0624200:intron | 45.0% | |
ATATGCTGTCGCCTATCATC+GGG | - | chr4_3:2187015-2187034 | None:intergenic | 45.0% | |
GATATGCTGTCGCCTATCAT+CGG | - | chr4_3:2187016-2187035 | None:intergenic | 45.0% | |
!! | TGGTGTTAAGAGTGCCACAT+TGG | - | chr4_3:2187157-2187176 | None:intergenic | 45.0% |
TAACACCATGTCCCATGTCT+AGG | + | chr4_3:2187169-2187188 | Msa0624200:intron | 45.0% | |
TCAAACCTAGACATGGGACA+TGG | - | chr4_3:2187177-2187196 | None:intergenic | 45.0% | |
TCACCCATTATAGGGAAGCT+CGG | - | chr4_3:2187216-2187235 | None:intergenic | 45.0% | |
TGGGTGACACGACATATCTT+AGG | + | chr4_3:2187229-2187248 | Msa0624200:intron | 45.0% | |
TGACACGACATATCTTAGGC+AGG | + | chr4_3:2187233-2187252 | Msa0624200:intron | 45.0% | |
GTCAAGATCTCTCTCTCATC+AGG | + | chr4_3:2187769-2187788 | Msa0624200:CDS | 45.0% | |
CTGGATATTACACACGCTAC+AGG | - | chr4_3:2188535-2188554 | None:intergenic | 45.0% | |
CTGTAGCGTGTGTAATATCC+AGG | + | chr4_3:2188533-2188552 | Msa0624200:CDS | 45.0% | |
GTGTGTAATATCCAGGGACT+GGG | + | chr4_3:2188540-2188559 | Msa0624200:CDS | 45.0% | |
TGAAGGATTCATCACCAAGG+AGG | + | chr4_3:2188600-2188619 | Msa0624200:CDS | 45.0% | |
GCCAGTAGCATATCTTGCAA+TGG | - | chr4_3:2189663-2189682 | None:intergenic | 45.0% | |
ACAACCTAGGCAACTTTGAC+TGG | - | chr4_3:2189864-2189883 | None:intergenic | 45.0% | |
!!! | ATATATTTGAATATTTTAAA+AGG | + | chr4_3:2178200-2178219 | Msa0624200:intron | 5.0% |
!!! | TATTTTTATATTTCAAATTT+TGG | + | chr4_3:2181238-2181257 | Msa0624200:intron | 5.0% |
!! | ATATTTAAAAAAACATAAAT+TGG | + | chr4_3:2181765-2181784 | Msa0624200:intron | 5.0% |
!! | AAGTAAATAAATATTTAATT+TGG | - | chr4_3:2184402-2184421 | None:intergenic | 5.0% |
!!! | TTTTTTTCTTATATAAAATT+AGG | + | chr4_3:2184806-2184825 | Msa0624200:intron | 5.0% |
!! | TATCATAAATTTAAATAAAT+TGG | + | chr4_3:2188108-2188127 | Msa0624200:intron | 5.0% |
TTGTTTGCGCTGAAACCGGA+CGG | - | chr4_3:2175992-2176011 | None:intergenic | 50.0% | |
! | CTCCTTGTTTGCGCTGAAAC+CGG | - | chr4_3:2175996-2176015 | None:intergenic | 50.0% |
GGTTTCAGCGCAAACAAGGA+GGG | + | chr4_3:2175995-2176014 | Msa0624200:five_prime_UTR | 50.0% | |
CCCTACCACCATTCTTCATC+AGG | + | chr4_3:2176272-2176291 | Msa0624200:CDS | 50.0% | |
GAGTAGTATGAGATGCTCGG+TGG | + | chr4_3:2176713-2176732 | Msa0624200:intron | 50.0% | |
GTATCAGACATGGTTGCTGG+CGG | + | chr4_3:2176820-2176839 | Msa0624200:intron | 50.0% | |
GCACTCTACGACGCTTTACT+CGG | - | chr4_3:2176856-2176875 | None:intergenic | 50.0% | |
!! | TTGATGAGATGTCGGCTCTC+AGG | + | chr4_3:2176878-2176897 | Msa0624200:intron | 50.0% |
GAGTGTTATGGGATGTTCGG+TGG | + | chr4_3:2176960-2176979 | Msa0624200:intron | 50.0% | |
CTGGGCTTGCACTAGAGAAA+TGG | - | chr4_3:2177437-2177456 | None:intergenic | 50.0% | |
CTCTAGTGCAAGCCCAGAAA+AGG | + | chr4_3:2177440-2177459 | Msa0624200:intron | 50.0% | |
TGCAAGCCCAGAAAAGGCTT+TGG | + | chr4_3:2177446-2177465 | Msa0624200:intron | 50.0% | |
CAAGGACCCATGCAAGTAAC+AGG | - | chr4_3:2177751-2177770 | None:intergenic | 50.0% | |
! | CTGTTACTTGCATGGGTCCT+TGG | + | chr4_3:2177749-2177768 | Msa0624200:CDS | 50.0% |
CACCACTACTGTCTCCACAA+AGG | - | chr4_3:2178642-2178661 | None:intergenic | 50.0% | |
!! | GATGGTGTTTGGGGCATTGT+TGG | + | chr4_3:2178930-2178949 | Msa0624200:CDS | 50.0% |
CACTTGTGTATGCTGACACG+GGG | + | chr4_3:2179636-2179655 | Msa0624200:CDS | 50.0% | |
ACTTGTGTATGCTGACACGG+GGG | + | chr4_3:2179637-2179656 | Msa0624200:CDS | 50.0% | |
!! | CGGTTTTGTAAGGCTGAGTG+AGG | - | chr4_3:2179901-2179920 | None:intergenic | 50.0% |
CGTTGGATGAGGTAAGACCT+GGG | - | chr4_3:2179963-2179982 | None:intergenic | 50.0% | |
ACGTTGGATGAGGTAAGACC+TGG | - | chr4_3:2179964-2179983 | None:intergenic | 50.0% | |
AGGTCTTACCTCATCCAACG+TGG | + | chr4_3:2179963-2179982 | Msa0624200:intron | 50.0% | |
GGTCTTACCTCATCCAACGT+GGG | + | chr4_3:2179964-2179983 | Msa0624200:intron | 50.0% | |
TAAGAGTCCCACGTTGGATG+AGG | - | chr4_3:2179974-2179993 | None:intergenic | 50.0% | |
GTGTGTTAAGAGTCCCACGT+TGG | - | chr4_3:2179980-2179999 | None:intergenic | 50.0% | |
CACTCTAGATGTTGCGTCAG+GGG | - | chr4_3:2180004-2180023 | None:intergenic | 50.0% | |
CACACTCTAGATGTTGCGTC+AGG | - | chr4_3:2180006-2180025 | None:intergenic | 50.0% | |
GCAGGTGGTCCAACATATCT+TGG | + | chr4_3:2180043-2180062 | Msa0624200:intron | 50.0% | |
!! | TGTCTTGATGATGCCAGAGG+GGG | + | chr4_3:2180450-2180469 | Msa0624200:intron | 50.0% |
! | TTTTGCTAGGTCAAGCTCGG+TGG | - | chr4_3:2180682-2180701 | None:intergenic | 50.0% |
TATTGTGAAGCGGGAACCCT+TGG | - | chr4_3:2180880-2180899 | None:intergenic | 50.0% | |
! | ACCTTATTTCGGGTGACCCT+TGG | + | chr4_3:2181120-2181139 | Msa0624200:intron | 50.0% |
TCCAAGGGTCACCCGAAATA+AGG | - | chr4_3:2181124-2181143 | None:intergenic | 50.0% | |
CGGGTGTTTGTCTGAAGGAA+AGG | - | chr4_3:2181404-2181423 | None:intergenic | 50.0% | |
TGGAGATGCATCGAATCGGA+CGG | - | chr4_3:2181424-2181443 | None:intergenic | 50.0% | |
CTCCTGGAGATGCATCGAAT+CGG | - | chr4_3:2181428-2181447 | None:intergenic | 50.0% | |
!! | TGACTTTTTCCACACCAGCG+TGG | - | chr4_3:2181468-2181487 | None:intergenic | 50.0% |
CCCCAGATTGCTTTATGGTG+GGG | - | chr4_3:2181646-2181665 | None:intergenic | 50.0% | |
CCCCACCATAAAGCAATCTG+GGG | + | chr4_3:2181643-2181662 | Msa0624200:CDS | 50.0% | |
ATTGGAACCTGGCATGTGCA+TGG | + | chr4_3:2181783-2181802 | Msa0624200:intron | 50.0% | |
ACGGTACTCCACTCACTACA+GGG | + | chr4_3:2181852-2181871 | Msa0624200:intron | 50.0% | |
GGACCTCACTGAACAGAGTT+CGG | + | chr4_3:2182061-2182080 | Msa0624200:intron | 50.0% | |
TCTCCGAACTCTGTTCAGTG+AGG | - | chr4_3:2182067-2182086 | None:intergenic | 50.0% | |
ATAACTCGGCACGCATGAGA+GGG | - | chr4_3:2182210-2182229 | None:intergenic | 50.0% | |
GATTGTGCAGAACCGATACG+GGG | - | chr4_3:2183910-2183929 | None:intergenic | 50.0% | |
TGCCCCTAGTTGCCTTATGT+TGG | + | chr4_3:2184593-2184612 | Msa0624200:intron | 50.0% | |
AGCGTCCTATCTAACCGTGT+GGG | - | chr4_3:2184645-2184664 | None:intergenic | 50.0% | |
AAGCGTCCTATCTAACCGTG+TGG | - | chr4_3:2184646-2184665 | None:intergenic | 50.0% | |
CAAAAGCGGCTTGTAAGGAG+AGG | - | chr4_3:2184696-2184715 | None:intergenic | 50.0% | |
! | GATCGGCCATCCAAGCTTTT+TGG | - | chr4_3:2184846-2184865 | None:intergenic | 50.0% |
CAAATACTGTCTGGCAGGCT+TGG | + | chr4_3:2184986-2185005 | Msa0624200:CDS | 50.0% | |
TTTCAGGATGTTCCCACCAC+AGG | + | chr4_3:2185093-2185112 | Msa0624200:CDS | 50.0% | |
CCATTCAAGTCACGATCCAG+AGG | - | chr4_3:2185672-2185691 | None:intergenic | 50.0% | |
CCTCTGGATCGTGACTTGAA+TGG | + | chr4_3:2185669-2185688 | Msa0624200:intron | 50.0% | |
GAACCATTGGAACCCGCTAT+TGG | - | chr4_3:2185696-2185715 | None:intergenic | 50.0% | |
TGGCAACAGTGGCTGGAAAA+TGG | - | chr4_3:2186037-2186056 | None:intergenic | 50.0% | |
!! | AACTGGTTGGTGGCAAATGG+TGG | - | chr4_3:2186057-2186076 | None:intergenic | 50.0% |
! | TTAGGGGACTGGTAGTTCAG+AGG | - | chr4_3:2186128-2186147 | None:intergenic | 50.0% |
CTACCAGTCCCCTAAATCTC+AGG | + | chr4_3:2186133-2186152 | Msa0624200:intron | 50.0% | |
TGTCCTGAGATTTAGGGGAC+TGG | - | chr4_3:2186139-2186158 | None:intergenic | 50.0% | |
GAACCAACAGACTCACATGG+TGG | + | chr4_3:2186228-2186247 | Msa0624200:intron | 50.0% | |
GAGTCAAGAGAAGCCAAGCA+AGG | - | chr4_3:2186325-2186344 | None:intergenic | 50.0% | |
TTTAGGGGAAGAGGCAACCT+AGG | - | chr4_3:2186418-2186437 | None:intergenic | 50.0% | |
ATCCTGCAATGGGATGAGCT+TGG | - | chr4_3:2186546-2186565 | None:intergenic | 50.0% | |
CAGCTATCCCAGCTGTTGAA+TGG | + | chr4_3:2186572-2186591 | Msa0624200:intron | 50.0% | |
GCACAACCCATTCAACAGCT+GGG | - | chr4_3:2186582-2186601 | None:intergenic | 50.0% | |
CCACGAATAACACAACACGG+GGG | + | chr4_3:2186675-2186694 | Msa0624200:intron | 50.0% | |
AAACCTGCTTGCGAGGTGTA+TGG | + | chr4_3:2186905-2186924 | Msa0624200:intron | 50.0% | |
TCACCCGAGCTTCCCTATAA+TGG | + | chr4_3:2187209-2187228 | Msa0624200:intron | 50.0% | |
CACCCGAGCTTCCCTATAAT+GGG | + | chr4_3:2187210-2187229 | Msa0624200:intron | 50.0% | |
CACCCATTATAGGGAAGCTC+GGG | - | chr4_3:2187215-2187234 | None:intergenic | 50.0% | |
TAAGTTCAGACCCGCACGAA+AGG | + | chr4_3:2187381-2187400 | Msa0624200:intron | 50.0% | |
TGATCGTTACGCCTTTCGTG+CGG | - | chr4_3:2187395-2187414 | None:intergenic | 50.0% | |
! | CACGAAAGGCGTAACGATCA+GGG | + | chr4_3:2187395-2187414 | Msa0624200:intron | 50.0% |
!! | TAACGATCAGGGCACTGTCT+CGG | + | chr4_3:2187406-2187425 | Msa0624200:intron | 50.0% |
CAAGGAATGGGGTGGTTGTT+TGG | - | chr4_3:2187695-2187714 | None:intergenic | 50.0% | |
CAAACAACCACCCCATTCCT+TGG | + | chr4_3:2187693-2187712 | Msa0624200:CDS | 50.0% | |
ACTGCGCTCTTCCAAGGAAT+GGG | - | chr4_3:2187707-2187726 | None:intergenic | 50.0% | |
TCATACACTGCGCTCTTCCA+AGG | - | chr4_3:2187713-2187732 | None:intergenic | 50.0% | |
! | TTGGAAGAGCGCAGTGTATG+AGG | + | chr4_3:2187712-2187731 | Msa0624200:CDS | 50.0% |
CGTGTGTAATATCCAGGGAC+TGG | + | chr4_3:2188539-2188558 | Msa0624200:CDS | 50.0% | |
GATAGCATTTACCCAGTCCC+TGG | - | chr4_3:2188554-2188573 | None:intergenic | 50.0% | |
GGGACTGGGTAAATGCTATC+TGG | + | chr4_3:2188554-2188573 | Msa0624200:CDS | 50.0% | |
AGGATTCATCACCAAGGAGG+AGG | + | chr4_3:2188603-2188622 | Msa0624200:CDS | 50.0% | |
GAGGCAGAAGCTTCACTTCA+AGG | + | chr4_3:2188622-2188641 | Msa0624200:CDS | 50.0% | |
GAAGCTTCACTTCAAGGTCC+AGG | + | chr4_3:2188628-2188647 | Msa0624200:CDS | 50.0% | |
CCACGTTCTTGAAATCCTCC+TGG | - | chr4_3:2188649-2188668 | None:intergenic | 50.0% | |
CCAGGAGGATTTCAAGAACG+TGG | + | chr4_3:2188646-2188665 | Msa0624200:CDS | 50.0% | |
CAATTAGGCAACCGGCATCT+GGG | - | chr4_3:2188714-2188733 | None:intergenic | 50.0% | |
ACAATTAGGCAACCGGCATC+TGG | - | chr4_3:2188715-2188734 | None:intergenic | 50.0% | |
GTCCGGTTTCAGCGCAAACA+AGG | + | chr4_3:2175991-2176010 | Msa0624200:five_prime_UTR | 55.0% | |
CGGTTTCAGCGCAAACAAGG+AGG | + | chr4_3:2175994-2176013 | Msa0624200:five_prime_UTR | 55.0% | |
TTCAGCGCAAACAAGGAGGG+AGG | + | chr4_3:2175998-2176017 | Msa0624200:five_prime_UTR | 55.0% | |
TCAGCGCAAACAAGGAGGGA+GGG | + | chr4_3:2175999-2176018 | Msa0624200:five_prime_UTR | 55.0% | |
TGGAGACAGTAGTGGTGTGC+AGG | + | chr4_3:2178645-2178664 | Msa0624200:CDS | 55.0% | |
GGAGACAGTAGTGGTGTGCA+GGG | + | chr4_3:2178646-2178665 | Msa0624200:CDS | 55.0% | |
!! | GGTGTTTGGGGCATTGTTGG+TGG | + | chr4_3:2178933-2178952 | Msa0624200:CDS | 55.0% |
! | CATCTAGAGTGTGACCCGAG+TGG | + | chr4_3:2180013-2180032 | Msa0624200:intron | 55.0% |
TCGGACGGGTGTTTGTCTGA+AGG | - | chr4_3:2181409-2181428 | None:intergenic | 55.0% | |
GGAGATGCATCGAATCGGAC+GGG | - | chr4_3:2181423-2181442 | None:intergenic | 55.0% | |
! | GTCCGATTCGATGCATCTCC+AGG | + | chr4_3:2181423-2181442 | Msa0624200:CDS | 55.0% |
GAACCTGGCATGTGCATGGA+TGG | + | chr4_3:2181787-2181806 | Msa0624200:intron | 55.0% | |
GCATGGATGGCCTACTCAGT+AGG | + | chr4_3:2181800-2181819 | Msa0624200:intron | 55.0% | |
CACGGTACTCCACTCACTAC+AGG | + | chr4_3:2181851-2181870 | Msa0624200:intron | 55.0% | |
GTACTCCACTCACTACAGGG+TGG | + | chr4_3:2181855-2181874 | Msa0624200:intron | 55.0% | |
CAGTGAGGTCCTCGATTGTC+TGG | - | chr4_3:2182052-2182071 | None:intergenic | 55.0% | |
CATAACTCGGCACGCATGAG+AGG | - | chr4_3:2182211-2182230 | None:intergenic | 55.0% | |
CTCTCATGCGTGCCGAGTTA+TGG | + | chr4_3:2182209-2182228 | Msa0624200:intron | 55.0% | |
CTCTCATGCGTGCCGAGTTA+TGG | + | chr4_3:2182209-2182228 | Msa0624200:intron | 55.0% | |
CTCTCATGCGTGCCGAGTTA+TGG | + | chr4_3:2182209-2182228 | Msa0624200:intron | 55.0% | |
GGAGGTCTTGGGTTCAAACC+CGG | + | chr4_3:2184024-2184043 | Msa0624200:intron | 55.0% | |
TTGGGTTCAAACCCGGACGA+AGG | + | chr4_3:2184031-2184050 | Msa0624200:intron | 55.0% | |
GGGCAGATCGCAATCAAGGT+GGG | - | chr4_3:2184578-2184597 | None:intergenic | 55.0% | |
CTAGGGGCAGATCGCAATCA+AGG | - | chr4_3:2184582-2184601 | None:intergenic | 55.0% | |
! | GGGGTCGATTTAGTCCCACA+CGG | + | chr4_3:2184628-2184647 | Msa0624200:intron | 55.0% |
AGGATGTTCCCACCACAGGT+AGG | + | chr4_3:2185097-2185116 | Msa0624200:intron | 55.0% | |
!! | GGTCCAATAGCGGGTTCCAA+TGG | + | chr4_3:2185690-2185709 | Msa0624200:intron | 55.0% |
CAAATGGTGGCAACAGTGGC+TGG | - | chr4_3:2186044-2186063 | None:intergenic | 55.0% | |
GTGGCAAATGGTGGCAACAG+TGG | - | chr4_3:2186048-2186067 | None:intergenic | 55.0% | |
GCACCACCATGTGAGTCTGT+TGG | - | chr4_3:2186234-2186253 | None:intergenic | 55.0% | |
! | ACTCACATGGTGGTGCGTAG+AGG | + | chr4_3:2186238-2186257 | Msa0624200:intron | 55.0% |
AGCTTGGACCAGTCTGCAGT+TGG | - | chr4_3:2186530-2186549 | None:intergenic | 55.0% | |
GTCCAAGCTCATCCCATTGC+AGG | + | chr4_3:2186541-2186560 | Msa0624200:intron | 55.0% | |
GGCACAACCCATTCAACAGC+TGG | - | chr4_3:2186583-2186602 | None:intergenic | 55.0% | |
! | CCCCCGTGTTGTGTTATTCG+TGG | - | chr4_3:2186678-2186697 | None:intergenic | 55.0% |
CATCCATACACCTCGCAAGC+AGG | - | chr4_3:2186911-2186930 | None:intergenic | 55.0% | |
GATCGTTACGCCTTTCGTGC+GGG | - | chr4_3:2187394-2187413 | None:intergenic | 55.0% | |
! | GCACGAAAGGCGTAACGATC+AGG | + | chr4_3:2187394-2187413 | Msa0624200:intron | 55.0% |
CTGCGCTCTTCCAAGGAATG+GGG | - | chr4_3:2187706-2187725 | None:intergenic | 55.0% | |
CACTGCGCTCTTCCAAGGAA+TGG | - | chr4_3:2187708-2187727 | None:intergenic | 55.0% | |
TGAAGCTTCTGCCTCCTCCT+TGG | - | chr4_3:2188617-2188636 | None:intergenic | 55.0% | |
GCTTCACTTCAAGGTCCAGG+AGG | + | chr4_3:2188631-2188650 | Msa0624200:CDS | 55.0% | |
AGAACCTGAGCTGTCCCGTT+TGG | + | chr4_3:2189683-2189702 | Msa0624200:CDS | 55.0% | |
GAACCTGAGCTGTCCCGTTT+GGG | + | chr4_3:2189684-2189703 | Msa0624200:CDS | 55.0% | |
TGGCACAGGCATCTTGTCGC+AGG | + | chr4_3:2179437-2179456 | Msa0624200:intron | 60.0% | |
CACCTGCTATCGCACCACTC+GGG | - | chr4_3:2180030-2180049 | None:intergenic | 60.0% | |
CCACCTGCTATCGCACCACT+CGG | - | chr4_3:2180031-2180050 | None:intergenic | 60.0% | |
TGTGAAGCGGGAACCCTTGG+AGG | - | chr4_3:2180877-2180896 | None:intergenic | 60.0% | |
AGGCCATCCATGCACATGCC+AGG | - | chr4_3:2181793-2181812 | None:intergenic | 60.0% | |
TCGCACCACCCTGTAGTGAG+TGG | - | chr4_3:2181863-2181882 | None:intergenic | 60.0% | |
GGGGCAGATCGCAATCAAGG+TGG | - | chr4_3:2184579-2184598 | None:intergenic | 60.0% | |
GGGTCTGAACTTACCCGGCA+AGG | - | chr4_3:2187374-2187393 | None:intergenic | 60.0% | |
CGTGCGGGTCTGAACTTACC+CGG | - | chr4_3:2187379-2187398 | None:intergenic | 60.0% | |
CACTGTCTCGGAGAGAGGCT+TGG | + | chr4_3:2187418-2187437 | Msa0624200:intron | 60.0% | |
!! | TCGGAGAGAGGCTTGGTGAG+AGG | + | chr4_3:2187425-2187444 | Msa0624200:intron | 60.0% |
!! | CGGAGAGAGGCTTGGTGAGA+GGG | + | chr4_3:2187426-2187445 | Msa0624200:intron | 60.0% |
!! | GGAGAGAGGCTTGGTGAGAG+GGG | + | chr4_3:2187427-2187446 | Msa0624200:intron | 60.0% |
CGCTCTTCCAAGGAATGGGG+TGG | - | chr4_3:2187703-2187722 | None:intergenic | 60.0% | |
GGTTCCCCACCTCAAGAAGC+TGG | + | chr4_3:2188683-2188702 | Msa0624200:CDS | 60.0% | |
TGGGGCCAGCTTCTTGAGGT+GGG | - | chr4_3:2188691-2188710 | None:intergenic | 60.0% | |
TAGGCAACCGGCATCTGGGT+GGG | - | chr4_3:2188710-2188729 | None:intergenic | 60.0% | |
TTAGGCAACCGGCATCTGGG+TGG | - | chr4_3:2188711-2188730 | None:intergenic | 60.0% | |
CTTCCCAAACGGGACAGCTC+AGG | - | chr4_3:2189690-2189709 | None:intergenic | 60.0% | |
CTGAGCTGTCCCGTTTGGGA+AGG | + | chr4_3:2189688-2189707 | Msa0624200:CDS | 60.0% | |
GCGCAAACAAGGAGGGAGGG+AGG | + | chr4_3:2176002-2176021 | Msa0624200:five_prime_UTR | 65.0% | |
GACCCGAGTGGTGCGATAGC+AGG | + | chr4_3:2180025-2180044 | Msa0624200:intron | 65.0% | |
CCGAGTGGTGCGATAGCAGG+TGG | + | chr4_3:2180028-2180047 | Msa0624200:intron | 65.0% | |
ACTCGGCACGCATGAGAGGG+CGG | - | chr4_3:2182207-2182226 | None:intergenic | 65.0% | |
GGGGGGTTGGGTAGCTCAAC+TGG | + | chr4_3:2183978-2183997 | Msa0624200:intron | 65.0% | |
!! | CAGGGCACTGTCTCGGAGAG+AGG | + | chr4_3:2187413-2187432 | Msa0624200:intron | 65.0% |
GGGGCCAGCTTCTTGAGGTG+GGG | - | chr4_3:2188690-2188709 | None:intergenic | 65.0% | |
GTGGGGCCAGCTTCTTGAGG+TGG | - | chr4_3:2188692-2188711 | None:intergenic | 65.0% | |
TGGGTGGGGCCAGCTTCTTG+AGG | - | chr4_3:2188695-2188714 | None:intergenic | 65.0% | |
AGGCAACCGGCATCTGGGTG+GGG | - | chr4_3:2188709-2188728 | None:intergenic | 65.0% | |
CTCGGCACGCATGAGAGGGC+GGG | - | chr4_3:2182206-2182225 | None:intergenic | 70.0% | |
AGCTGGCCCCACCCAGATGC+CGG | + | chr4_3:2188700-2188719 | Msa0624200:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 2175981 | 2189921 | 2175981 | ID=Msa0624200;Name=Msa0624200 |
chr4_3 | mRNA | 2175981 | 2189921 | 2175981 | ID=Msa0624200-mRNA-1;Parent=Msa0624200;Name=Msa0624200-mRNA-1;_AED=0.11;_eAED=0.14;_QI=163|0.90|0.91|1|1|1|12|0|734 |
chr4_3 | exon | 2175981 | 2176293 | 2175981 | ID=Msa0624200-mRNA-1:exon:558;Parent=Msa0624200-mRNA-1 |
chr4_3 | exon | 2177652 | 2177840 | 2177652 | ID=Msa0624200-mRNA-1:exon:559;Parent=Msa0624200-mRNA-1 |
chr4_3 | exon | 2178520 | 2178729 | 2178520 | ID=Msa0624200-mRNA-1:exon:560;Parent=Msa0624200-mRNA-1 |
chr4_3 | exon | 2178870 | 2178959 | 2178870 | ID=Msa0624200-mRNA-1:exon:561;Parent=Msa0624200-mRNA-1 |
chr4_3 | exon | 2179445 | 2179522 | 2179445 | ID=Msa0624200-mRNA-1:exon:562;Parent=Msa0624200-mRNA-1 |
chr4_3 | exon | 2179626 | 2179790 | 2179626 | ID=Msa0624200-mRNA-1:exon:563;Parent=Msa0624200-mRNA-1 |
chr4_3 | exon | 2181335 | 2181703 | 2181335 | ID=Msa0624200-mRNA-1:exon:564;Parent=Msa0624200-mRNA-1 |
chr4_3 | exon | 2184828 | 2185114 | 2184828 | ID=Msa0624200-mRNA-1:exon:565;Parent=Msa0624200-mRNA-1 |
chr4_3 | exon | 2187628 | 2187790 | 2187628 | ID=Msa0624200-mRNA-1:exon:566;Parent=Msa0624200-mRNA-1 |
chr4_3 | exon | 2188448 | 2188797 | 2188448 | ID=Msa0624200-mRNA-1:exon:567;Parent=Msa0624200-mRNA-1 |
chr4_3 | exon | 2189632 | 2189709 | 2189632 | ID=Msa0624200-mRNA-1:exon:568;Parent=Msa0624200-mRNA-1 |
chr4_3 | exon | 2189846 | 2189921 | 2189846 | ID=Msa0624200-mRNA-1:exon:569;Parent=Msa0624200-mRNA-1 |
chr4_3 | five_prime_UTR | 2175981 | 2176143 | 2175981 | ID=Msa0624200-mRNA-1:five_prime_utr;Parent=Msa0624200-mRNA-1 |
chr4_3 | CDS | 2176144 | 2176293 | 2176144 | ID=Msa0624200-mRNA-1:cds;Parent=Msa0624200-mRNA-1 |
chr4_3 | CDS | 2177652 | 2177840 | 2177652 | ID=Msa0624200-mRNA-1:cds;Parent=Msa0624200-mRNA-1 |
chr4_3 | CDS | 2178520 | 2178729 | 2178520 | ID=Msa0624200-mRNA-1:cds;Parent=Msa0624200-mRNA-1 |
chr4_3 | CDS | 2178870 | 2178959 | 2178870 | ID=Msa0624200-mRNA-1:cds;Parent=Msa0624200-mRNA-1 |
chr4_3 | CDS | 2179445 | 2179522 | 2179445 | ID=Msa0624200-mRNA-1:cds;Parent=Msa0624200-mRNA-1 |
chr4_3 | CDS | 2179626 | 2179790 | 2179626 | ID=Msa0624200-mRNA-1:cds;Parent=Msa0624200-mRNA-1 |
chr4_3 | CDS | 2181335 | 2181703 | 2181335 | ID=Msa0624200-mRNA-1:cds;Parent=Msa0624200-mRNA-1 |
chr4_3 | CDS | 2184828 | 2185114 | 2184828 | ID=Msa0624200-mRNA-1:cds;Parent=Msa0624200-mRNA-1 |
chr4_3 | CDS | 2187628 | 2187790 | 2187628 | ID=Msa0624200-mRNA-1:cds;Parent=Msa0624200-mRNA-1 |
chr4_3 | CDS | 2188448 | 2188797 | 2188448 | ID=Msa0624200-mRNA-1:cds;Parent=Msa0624200-mRNA-1 |
chr4_3 | CDS | 2189632 | 2189709 | 2189632 | ID=Msa0624200-mRNA-1:cds;Parent=Msa0624200-mRNA-1 |
chr4_3 | CDS | 2189846 | 2189921 | 2189846 | ID=Msa0624200-mRNA-1:cds;Parent=Msa0624200-mRNA-1 |
Gene Sequence |
Protein sequence |