AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0627600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0627600 MtrunA17_Chr4g0003511 84.471 1011 116 5 1 1001 73 1052 0.0 1670
Msa0627600 MtrunA17_Chr4g0003501 84.356 1010 94 7 1 1001 1 955 0.0 1654
Msa0627600 MtrunA17_Chr5g0399801 73.308 1049 205 13 13 1001 56 1089 0.0 1473
Msa0627600 MtrunA17_Chr7g0232811 42.669 532 218 10 490 1001 75 539 1.49e-126 395
Msa0627600 MtrunA17_Chr8g0354821 40.280 571 312 14 450 998 122 685 2.16e-121 386
Msa0627600 MtrunA17_Chr3g0080761 40.367 545 293 15 480 1000 127 663 8.18e-119 379
Msa0627600 MtrunA17_Chr7g0252211 41.154 520 264 14 516 1001 246 757 4.61e-117 377
Msa0627600 MtrunA17_Chr6g0476111 40.996 522 265 13 516 1001 180 694 5.78e-117 375
Msa0627600 MtrunA17_Chr6g0476121 41.815 507 256 13 527 1001 144 643 3.44e-116 371
Msa0627600 MtrunA17_Chr7g0255181 40.684 526 271 18 493 1000 202 704 7.11e-116 372
Msa0627600 MtrunA17_Chr8g0368901 42.950 461 239 12 530 970 299 755 3.26e-114 370
Msa0627600 MtrunA17_Chr7g0232981 41.165 532 217 11 483 1001 68 516 1.80e-113 360
Msa0627600 MtrunA17_Chr8g0368911 41.866 461 248 9 528 970 290 748 1.36e-112 366
Msa0627600 MtrunA17_Chr7g0232841 40.637 534 214 13 489 1001 77 528 2.89e-110 352
Msa0627600 MtrunA17_Chr1g0163051 37.522 557 300 14 454 975 106 649 6.60e-107 347
Msa0627600 MtrunA17_Chr8g0369301 42.048 459 244 10 531 970 280 735 7.20e-107 349
Msa0627600 MtrunA17_Chr1g0170651 40.037 537 260 12 492 1001 45 546 7.07e-103 333
Msa0627600 MtrunA17_Chr6g0467531 38.544 467 250 13 528 970 109 562 2.12e-91 302
Msa0627600 MtrunA17_Chr6g0467421 38.429 471 245 13 528 970 109 562 2.55e-91 302
Msa0627600 MtrunA17_Chr6g0467381 38.429 471 245 13 528 970 109 562 8.64e-91 301
Msa0627600 MtrunA17_Chr6g0467401 38.217 471 246 13 528 970 109 562 5.09e-89 296
Msa0627600 MtrunA17_Chr3g0094881 35.283 513 282 14 494 970 123 621 2.24e-85 288
Msa0627600 MtrunA17_Chr1g0163041 36.523 512 284 16 494 975 68 568 4.01e-84 283
Msa0627600 MtrunA17_Chr6g0467411 35.394 469 237 14 530 970 50 480 2.00e-75 256
Msa0627600 MtrunA17_Chr2g0306961 34.200 500 259 12 494 970 9 461 6.10e-74 251
Msa0627600 MtrunA17_Chr5g0403241 35.802 324 143 10 719 1001 1208 1507 1.09e-44 176
Msa0627600 MtrunA17_Chr4g0075321 39.631 217 108 4 788 1001 868 1064 6.04e-39 157
Msa0627600 MtrunA17_Chr7g0232751 56.637 113 45 1 893 1001 7 119 8.41e-38 137
Msa0627600 MtrunA17_Chr8g0373821 38.426 216 103 6 786 996 343 533 6.09e-36 144
Msa0627600 MtrunA17_Chr1g0183321 31.024 332 155 13 721 996 428 741 2.00e-30 129
Msa0627600 MtrunA17_Chr1g0190311 29.970 337 159 11 721 999 325 642 8.19e-30 126
Msa0627600 MtrunA17_Chr7g0232861 36.559 186 97 4 490 671 74 242 3.90e-27 111
Msa0627600 MtrunA17_Chr7g0262001 25.872 344 167 9 715 996 380 697 1.94e-25 113
Msa0627600 MtrunA17_Chr7g0232761 36.364 198 97 6 490 679 91 267 5.74e-25 105
Msa0627600 MtrunA17_Chr7g0232871 43.810 105 30 1 778 882 2 77 1.53e-21 90.9
Msa0627600 MtrunA17_Chr1g0201621 32.821 195 93 8 806 997 61 220 6.33e-19 91.3
Msa0627600 MtrunA17_Chr2g0305371 32.990 194 94 6 807 1000 314 471 9.25e-19 90.9
Msa0627600 MtrunA17_Chr6g0477001 31.313 198 102 6 803 1000 87 250 1.24e-18 88.6
Msa0627600 MtrunA17_Chr1g0201311 32.308 195 94 8 806 997 61 220 1.70e-18 90.1
Msa0627600 MtrunA17_Chr3g0125251 34.184 196 85 7 811 1000 1307 1464 1.73e-18 91.7
Msa0627600 MtrunA17_Chr5g0448331 34.615 156 85 4 556 700 267 416 2.12e-16 84.3
Msa0627600 MtrunA17_Chr8g0389931 33.974 156 86 4 556 700 261 410 9.02e-16 82.4
Msa0627600 MtrunA17_Chr6g0460921 29.046 241 127 9 766 1000 217 419 4.73e-15 78.6
Msa0627600 MtrunA17_Chr8g0347071 33.548 155 65 5 827 975 806 928 7.58e-13 73.2
Msa0627600 MtrunA17_Chr2g0297191 26.744 172 92 4 829 1000 1033 1170 9.69e-13 72.8
Msa0627600 MtrunA17_Chr7g0235081 34.177 158 77 6 817 973 182 313 1.04e-12 70.9
Msa0627600 MtrunA17_Chr7g0275611 33.548 155 65 5 827 975 821 943 1.46e-12 72.0
Msa0627600 MtrunA17_Chr1g0149611 27.485 171 96 5 830 1000 365 507 1.12e-11 68.6
Msa0627600 MtrunA17_Chr1g0147121 32.867 143 58 4 839 975 903 1013 5.25e-11 67.0
Msa0627600 MtrunA17_Chr3g0126701 34.266 143 56 5 839 975 932 1042 6.67e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0627600 AT2G22740.2 61.950 523 182 8 494 1001 270 790 0.0 642
Msa0627600 AT2G22740.1 61.950 523 182 8 494 1001 270 790 0.0 642
Msa0627600 AT2G35160.2 60.078 516 172 5 493 1001 306 794 0.0 638
Msa0627600 AT2G35160.3 60.078 516 172 5 493 1001 306 794 0.0 638
Msa0627600 AT2G35160.1 60.078 516 172 5 493 1001 306 794 0.0 638
Msa0627600 AT2G35160.4 60.078 516 172 5 493 1001 306 794 0.0 638
Msa0627600 AT2G35160.5 60.078 516 172 5 493 1001 270 758 0.0 637
Msa0627600 AT5G04940.2 41.604 536 283 16 483 1000 146 669 5.55e-121 385
Msa0627600 AT5G04940.1 41.604 536 283 16 483 1000 146 669 5.55e-121 385
Msa0627600 AT5G13960.1 40.187 535 277 14 496 1001 104 624 1.97e-114 366
Msa0627600 AT5G13960.2 42.412 481 245 12 550 1001 13 490 7.01e-113 357
Msa0627600 AT1G73100.1 40.000 535 291 14 482 1000 148 668 8.08e-111 358
Msa0627600 AT4G13460.1 38.431 510 289 11 486 975 137 641 5.32e-104 339
Msa0627600 AT4G13460.2 38.431 510 289 11 486 975 137 641 5.32e-104 339
Msa0627600 AT2G33290.1 34.896 576 341 12 423 971 70 638 1.33e-97 322
Msa0627600 AT2G33290.3 34.896 576 341 12 423 971 70 638 1.33e-97 322
Msa0627600 AT2G33290.4 34.896 576 341 12 423 971 70 638 1.33e-97 322
Msa0627600 AT2G33290.2 34.896 576 341 12 423 971 70 638 1.33e-97 322
Msa0627600 AT2G24740.1 35.219 548 279 17 482 998 250 752 2.19e-86 294
Msa0627600 AT1G17770.1 36.998 473 269 12 551 1000 226 692 4.83e-86 292
Msa0627600 AT5G47150.1 46.977 215 111 3 490 702 114 327 1.31e-50 182
Msa0627600 AT5G47160.1 41.636 269 149 5 430 695 144 407 1.06e-45 170
Msa0627600 AT5G47160.3 41.636 269 149 5 430 695 144 407 1.06e-45 170
Msa0627600 AT5G47160.2 41.636 269 149 5 430 695 144 407 1.06e-45 170
Msa0627600 AT2G23740.1 33.956 321 160 11 711 1000 1075 1374 6.91e-38 154
Msa0627600 AT2G23740.3 33.956 321 160 11 711 1000 1082 1381 7.63e-38 154
Msa0627600 AT2G23740.6 33.956 321 160 11 711 1000 1082 1381 7.63e-38 154
Msa0627600 AT2G23740.2 33.956 321 160 11 711 1000 1082 1381 7.63e-38 154
Msa0627600 AT3G04380.1 28.453 362 183 13 692 999 121 460 1.44e-29 124
Msa0627600 AT3G04380.2 28.453 362 183 13 692 999 94 433 2.23e-29 123
Msa0627600 AT3G04380.3 28.453 362 183 13 692 999 105 444 2.45e-29 123
Msa0627600 AT3G04380.6 28.453 362 183 13 692 999 94 433 3.15e-29 122
Msa0627600 AT3G04380.4 28.453 362 183 13 692 999 121 460 3.20e-29 123
Msa0627600 AT3G04380.5 28.453 362 183 13 692 999 78 417 4.02e-29 122
Msa0627600 AT2G05900.1 36.574 216 121 9 569 772 1 212 9.29e-28 115
Msa0627600 AT2G05900.1 41.463 82 40 2 917 998 236 309 2.23e-11 66.6
Msa0627600 AT2G23740.4 34.000 250 117 9 711 929 1082 1314 1.36e-27 121
Msa0627600 AT2G23740.5 34.000 250 117 9 711 929 1082 1314 1.36e-27 121
Msa0627600 AT5G43990.16 28.443 334 162 13 721 999 373 684 3.49e-26 115
Msa0627600 AT5G43990.5 28.443 334 162 13 721 999 373 684 3.49e-26 115
Msa0627600 AT5G43990.17 28.443 334 162 13 721 999 373 684 3.49e-26 115
Msa0627600 AT5G43990.14 28.443 334 162 13 721 999 373 684 3.49e-26 115
Msa0627600 AT5G43990.15 28.443 334 162 13 721 999 396 707 4.03e-26 115
Msa0627600 AT5G43990.10 28.443 334 162 13 721 999 396 707 4.03e-26 115
Msa0627600 AT5G43990.9 28.443 334 162 13 721 999 416 727 4.20e-26 115
Msa0627600 AT5G43990.2 28.443 334 162 13 721 999 416 727 4.20e-26 115
Msa0627600 AT5G43990.3 28.443 334 162 13 721 999 393 704 4.88e-26 115
Msa0627600 AT5G43990.11 28.443 334 162 13 721 999 393 704 4.88e-26 115
Msa0627600 AT5G43990.1 28.443 334 162 13 721 999 393 704 4.88e-26 115
Msa0627600 AT5G43990.4 28.443 334 162 13 721 999 393 704 4.88e-26 115
Msa0627600 AT5G43990.7 28.443 334 162 13 721 999 304 615 6.66e-26 114
Msa0627600 AT1G04050.2 33.668 199 110 5 804 999 542 721 8.00e-26 115
Msa0627600 AT1G04050.1 33.668 199 110 5 804 999 542 721 8.00e-26 115
Msa0627600 AT5G43990.8 28.443 334 162 13 721 999 324 635 8.05e-26 114
Msa0627600 AT5G43990.12 28.443 334 162 13 721 999 324 635 8.05e-26 114
Msa0627600 AT5G43990.6 28.443 334 162 13 721 999 324 635 8.05e-26 114
Msa0627600 AT5G43990.13 28.443 334 162 13 721 999 324 635 8.05e-26 114
Msa0627600 AT1G04050.3 33.668 199 110 5 804 999 438 617 8.24e-26 114
Msa0627600 AT3G03750.2 33.163 196 115 6 806 1000 169 349 9.18e-21 95.5
Msa0627600 AT4G30860.1 30.034 293 136 13 717 1000 232 464 7.14e-19 91.7
Msa0627600 AT1G76710.2 32.828 198 95 7 806 1000 66 228 8.06e-19 91.7
Msa0627600 AT1G76710.1 32.828 198 95 7 806 1000 66 228 8.06e-19 91.7
Msa0627600 AT1G76710.4 32.828 198 95 7 806 1000 66 228 9.86e-19 91.3
Msa0627600 AT1G76710.3 32.828 198 95 7 806 1000 66 228 1.06e-18 91.3
Msa0627600 AT1G77300.2 31.579 190 96 8 813 1000 1009 1166 5.70e-17 87.0
Msa0627600 AT1G77300.1 31.579 190 96 8 813 1000 1009 1166 7.43e-17 87.0
Msa0627600 AT1G57820.1 33.758 157 86 5 556 700 277 427 2.72e-16 84.3
Msa0627600 AT1G57820.3 33.758 157 86 5 556 700 277 427 2.72e-16 84.3
Msa0627600 AT1G57820.2 33.117 154 88 5 556 700 277 424 1.73e-15 81.6
Msa0627600 AT3G59960.3 30.058 173 85 6 829 1000 112 249 2.77e-14 75.1
Msa0627600 AT3G59960.2 30.058 173 85 6 829 1000 112 249 2.77e-14 75.1
Msa0627600 AT3G59960.4 30.058 173 85 6 829 1000 112 249 2.77e-14 75.1
Msa0627600 AT3G59960.1 30.058 173 85 6 829 1000 112 249 7.46e-14 74.3
Msa0627600 AT4G08590.2 36.641 131 65 4 556 679 237 356 1.10e-13 75.1
Msa0627600 AT2G44150.1 29.651 172 87 6 829 1000 117 254 1.72e-13 73.9
Msa0627600 AT3G61740.2 34.615 156 63 6 827 975 838 961 5.91e-13 73.9
Msa0627600 AT3G61740.1 34.615 156 63 6 827 975 874 997 6.82e-13 73.6
Msa0627600 AT4G08590.6 35.878 131 67 4 556 679 237 357 1.54e-12 71.2
Msa0627600 AT4G08590.4 35.878 131 67 4 556 679 237 357 1.56e-12 70.9
Msa0627600 AT4G08590.5 35.878 131 67 4 556 679 237 357 1.56e-12 70.9
Msa0627600 AT3G03750.1 29.082 196 107 8 806 1000 169 333 1.77e-12 70.5
Msa0627600 AT4G08590.3 35.878 131 67 4 556 679 237 357 2.23e-12 70.5
Msa0627600 AT4G27910.1 31.707 164 69 6 839 996 896 1022 7.79e-12 70.1
Msa0627600 AT1G02580.1 28.571 224 125 6 766 987 485 675 2.73e-11 68.2
Msa0627600 AT5G53430.1 31.707 164 69 6 839 996 912 1038 5.05e-11 67.4

Find 217 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGCTCGAACTATGTGATTT+TGG 0.106914 4_3:-7953705 None:intergenic
TCCTGAAGGGATGGAATTTA+AGG 0.160993 4_3:-7954837 None:intergenic
CGAAGACGATGTGCCTATTT+TGG 0.176590 4_3:+7952720 Msa0627600:CDS
TTGAGTCAGAATCTGGAAAA+AGG 0.241271 4_3:-7954991 None:intergenic
AGAATAGAGCTTAATATAAT+TGG 0.247368 4_3:+7954002 Msa0627600:CDS
TGGCCTTCATCGCCAGATTC+AGG 0.250113 4_3:+7954022 Msa0627600:CDS
ATATCCCCATTATGATTAAA+TGG 0.280457 4_3:-7954674 None:intergenic
GTTGAAGGGCACTTGCATTT+AGG 0.290171 4_3:-7954731 None:intergenic
TGCAACTAGTATTGTTTCTT+CGG 0.298661 4_3:+7954082 Msa0627600:CDS
CTTGAACTTGAGTCAGAATC+TGG 0.299589 4_3:-7954998 None:intergenic
AAAGGTGTACTGAATCATTC+TGG 0.301672 4_3:+7953564 Msa0627600:CDS
GAGATTCCATTTAATCATAA+TGG 0.305009 4_3:+7954668 Msa0627600:CDS
AGATTCCATTTAATCATAAT+GGG 0.307894 4_3:+7954669 Msa0627600:CDS
CAATTTCTTCACTTCCTTCA+AGG 0.309539 4_3:-7954414 None:intergenic
TGAAGACTGTACCTTGAAAA+AGG 0.316856 4_3:+7952606 Msa0627600:CDS
AAACGATGAACCTGCAAAAC+TGG 0.322145 4_3:+7952837 Msa0627600:CDS
GCAACTAGTATTGTTTCTTC+GGG 0.325203 4_3:+7954083 Msa0627600:CDS
CATTCTGAGCATAAAGATTA+GGG 0.326248 4_3:-7955102 None:intergenic
AAAGGATGTAATTGTACTAA+TGG 0.326952 4_3:+7954599 Msa0627600:CDS
TTAGTACAATTACATCCTTT+TGG 0.326965 4_3:-7954596 None:intergenic
GTACGCAACAACATTTCTTA+TGG 0.328564 4_3:-7954631 None:intergenic
GATAAGAGTGGCAAAGATTC+AGG 0.330173 4_3:+7952367 Msa0627600:CDS
CAAGTTGGCTAACTCTATTA+TGG 0.333516 4_3:-7954757 None:intergenic
GGAACCACCAATATTGATAT+TGG 0.341978 4_3:-7952995 None:intergenic
TGAAGGAGGCTTTAACTAAA+AGG 0.341984 4_3:+7953028 Msa0627600:CDS
GAGTCATGTTGGCAGGATAT+AGG 0.343797 4_3:+7954329 Msa0627600:CDS
GTCTTATCTGATCAAGTAGA+TGG 0.349850 4_3:+7952508 Msa0627600:CDS
TGAGGTTAACATAAATTCTA+AGG 0.349922 4_3:+7953281 Msa0627600:CDS
GGGATAAGATTGCAACATTC+AGG 0.352004 4_3:-7954572 None:intergenic
AATATCTTGGGATCTGTTCC+AGG 0.356395 4_3:+7953951 Msa0627600:CDS
ACGTTGAAAGTCTCCAAAAT+AGG 0.358827 4_3:-7952733 None:intergenic
TCCTTAAATTCCATCCCTTC+AGG 0.359885 4_3:+7954836 Msa0627600:CDS
ATACGATGCCTTTGATATAT+AGG 0.362188 4_3:-7952926 None:intergenic
AATCTATACCACCCTGAATC+TGG 0.363176 4_3:-7954034 None:intergenic
AAAGATTAGGGGAGCAACTA+TGG 0.371994 4_3:-7955090 None:intergenic
TCAAGTAGATGGGGATAGTT+TGG 0.377351 4_3:+7952519 Msa0627600:CDS
TACACCCCATCCCATTGAAT+TGG 0.382244 4_3:-7954810 None:intergenic
TCGTTGTCCAATATCAATAT+TGG 0.394388 4_3:+7952988 Msa0627600:CDS
ATTGGTTGGCATGGAAACTA+TGG 0.396042 4_3:+7952567 Msa0627600:CDS
ACATTCTGAGCATAAAGATT+AGG 0.400673 4_3:-7955103 None:intergenic
TCAACCAGAGCTTGCCTTGA+AGG 0.411478 4_3:+7954400 Msa0627600:CDS
GACATAGCTGCCTCGCCAGC+TGG 0.412521 4_3:-7952949 None:intergenic
TGAGGATACGTTTCTTCGTT+GGG 0.413137 4_3:-7952403 None:intergenic
ACTTCTTTCATATTTGACTT+TGG 0.416957 4_3:-7953861 None:intergenic
ACTTCCTTCAAGGCAAGCTC+TGG 0.417747 4_3:-7954404 None:intergenic
TCGGTTATGTATTTAAATGT+AGG 0.420707 4_3:-7954539 None:intergenic
TGTGGTTCTGTGGAATGTAC+TGG 0.421622 4_3:+7955277 Msa0627600:CDS
AGTCATGTTGGCAGGATATA+GGG 0.423970 4_3:+7954330 Msa0627600:CDS
CGGTTATGTATTTAAATGTA+GGG 0.424018 4_3:-7954538 None:intergenic
CACCCTGAATCTGGCGATGA+AGG 0.425090 4_3:-7954025 None:intergenic
ACTATCGATGCCGCTCAGTT+TGG 0.425253 4_3:+7955046 Msa0627600:CDS
TTCTATGAAAAGCATGGAAC+AGG 0.428026 4_3:-7953812 None:intergenic
TGGCGAGGTTCTTGAAGAAA+AGG 0.434427 4_3:+7954880 Msa0627600:CDS
TAATGAAGGGGAGAATATCT+TGG 0.437477 4_3:+7953938 Msa0627600:CDS
TAAAACCAATTCAATGGGAT+GGG 0.437648 4_3:+7954805 Msa0627600:CDS
TGAGTTGAACGAGGATTTGT+TGG 0.437761 4_3:+7952432 Msa0627600:CDS
GAAAGTAGTTCAAGGTTTGA+TGG 0.438952 4_3:+7953371 Msa0627600:CDS
TCAAAGAAGAAAGCTCCTTT+CGG 0.441008 4_3:-7953137 None:intergenic
TTGGTTTGGAAGATGGAAAA+GGG 0.446345 4_3:+7952295 None:intergenic
CATAATAGAGTTAGCCAACT+TGG 0.449808 4_3:+7954758 Msa0627600:CDS
GAAAAGATACTCATCATTAC+CGG 0.451653 4_3:-7954918 None:intergenic
TTGATAATGTCCAGCTGGAC+AGG 0.452841 4_3:+7953520 Msa0627600:CDS
TGTGTCGAAGATATTTCCTA+TGG 0.454904 4_3:+7954464 Msa0627600:CDS
TGCTGTCTTGATGATCATAA+AGG 0.455362 4_3:-7955126 None:intergenic
ACGGAACGAAAAGGAAAGAA+AGG 0.455459 4_3:+7953488 Msa0627600:CDS
TTTGGTTTGGAAGATGGAAA+AGG 0.457299 4_3:+7952294 None:intergenic
CTCTATTATGGCAGGTTGAA+GGG 0.459281 4_3:-7954745 None:intergenic
CAGAAGATCAAAAGCTTGAA+AGG 0.461492 4_3:+7954189 Msa0627600:CDS
TTGAGGATACGTTTCTTCGT+TGG 0.462081 4_3:-7952404 None:intergenic
GTTTAGCTTGCGAAGAATCC+CGG 0.462680 4_3:+7954376 Msa0627600:CDS
GCCGCTCAGTTTGGTAATGT+GGG 0.462843 4_3:+7955055 Msa0627600:CDS
TGAACCTGCAAAAGTGGAAT+TGG 0.464663 4_3:+7952549 Msa0627600:CDS
GTAGGTTTGATGTCTAAATC+AGG 0.465650 4_3:+7953465 Msa0627600:CDS
ACTCTATTATGGCAGGTTGA+AGG 0.468122 4_3:-7954746 None:intergenic
TGCCGCTCAGTTTGGTAATG+TGG 0.469315 4_3:+7955054 Msa0627600:CDS
GCACTCATCCTGACTGAGAC+GGG 0.469960 4_3:-7953115 None:intergenic
GGCCTTCATCGCCAGATTCA+GGG 0.471401 4_3:+7954023 Msa0627600:CDS
TAACATAAATTCTAAGGAAG+TGG 0.472992 4_3:+7953287 Msa0627600:CDS
TTAAAACCAATTCAATGGGA+TGG 0.477591 4_3:+7954804 Msa0627600:CDS
CAAATATGAAAGAAGTAAAG+AGG 0.479183 4_3:+7953868 Msa0627600:CDS
AGAAAGATATATGTTTATGA+TGG 0.479440 4_3:+7954293 Msa0627600:CDS
TGTAGTTGAGTCATGTTGGC+AGG 0.480080 4_3:+7954322 Msa0627600:CDS
GAATTCTGTTAGAGTGATAC+GGG 0.480221 4_3:+7954247 Msa0627600:CDS
GTTGCATCCGTTTCTGCTGA+TGG 0.482158 4_3:+7952331 Msa0627600:CDS
AGTAGTTCCAAGGTCTCATC+AGG 0.483311 4_3:+7953345 Msa0627600:CDS
GTTGAATATTTATTCCAAGT+TGG 0.486063 4_3:-7954772 None:intergenic
TATAGGGCCACGTGGGAAGC+TGG 0.486372 4_3:+7954346 Msa0627600:CDS
AACAAGTGACTGTACTTTGA+AGG 0.487630 4_3:+7952474 Msa0627600:CDS
TCAAATGGATGAGTCTACTT+TGG 0.489113 4_3:+7952813 Msa0627600:CDS
AATATCAATATTGGTGGTTC+CGG 0.489476 4_3:+7952997 Msa0627600:CDS
AGAATTCTGTTAGAGTGATA+CGG 0.492353 4_3:+7954246 Msa0627600:CDS
CAATGCTCCCCGTCTCAGTC+AGG 0.493023 4_3:+7953107 Msa0627600:CDS
TTTATGATCATCAAGACAGC+AGG 0.495980 4_3:+7955128 Msa0627600:CDS
AGAAGATCAAAAGCTTGAAA+GGG 0.499298 4_3:+7954190 Msa0627600:CDS
AATGAAGGGGAGAATATCTT+GGG 0.502787 4_3:+7953939 Msa0627600:CDS
AGTTCAAGGTTTGATGGCAG+TGG 0.503325 4_3:+7953377 Msa0627600:CDS
TCTGTTCCAGGGGTTGAAGT+TGG 0.503371 4_3:+7953963 Msa0627600:CDS
AAGGGAGCTGTGTTAATGAA+GGG 0.505095 4_3:+7953925 Msa0627600:CDS
AACGTGGAATTTGCAACTGA+AGG 0.507328 4_3:+7952751 Msa0627600:CDS
GAAAATTGATAATGTCCAGC+TGG 0.508457 4_3:+7953515 Msa0627600:CDS
AGTGATTTCATCTCATCAAA+TGG 0.508635 4_3:+7952798 Msa0627600:CDS
ACTCGTACCATCAGCAGAAA+CGG 0.511526 4_3:-7952338 None:intergenic
TGTACTGGTAGGTTGTATTG+AGG 0.511536 4_3:+7955292 Msa0627600:CDS
ACCTGCAAAACTGGCATTGG+CGG 0.513521 4_3:+7952846 Msa0627600:CDS
AGTAGTTCCAAGGTCTCATC+GGG 0.515055 4_3:+7953435 Msa0627600:CDS
AAGGTGTACTGAATCATTCT+GGG 0.515488 4_3:+7953565 Msa0627600:CDS
TGCAATCTTATCCCTCCAAA+AGG 0.515972 4_3:+7954581 Msa0627600:CDS
TTTCCTGCCCGATGAGACCT+TGG 0.518275 4_3:-7953442 None:intergenic
TGGTTCCGGTGCTTGTATGA+AGG 0.518765 4_3:+7953011 Msa0627600:CDS
TTTGATGGCAGTGGTTAAAG+AGG 0.518874 4_3:+7953386 Msa0627600:CDS
AAGGCAAGCTCTGGTTGACC+CGG 0.519854 4_3:-7954395 None:intergenic
AACAACAATAATCTTTGTGA+TGG 0.520060 4_3:+7954959 Msa0627600:CDS
TTGGCTAACTCTATTATGGC+AGG 0.524710 4_3:-7954753 None:intergenic
GCATTGCCTCCACATAAACT+TGG 0.526839 4_3:-7953090 None:intergenic
AAAACCAATTCAATGGGATG+GGG 0.526952 4_3:+7954806 Msa0627600:CDS
ATCGTATGTCAGCTCTTGCA+AGG 0.529691 4_3:-7955191 None:intergenic
TTGTCCAATATCAATATTGG+TGG 0.531639 4_3:+7952991 Msa0627600:CDS
CTCAAGTTCAAGTGAAGTAG+TGG 0.532681 4_3:+7955009 Msa0627600:CDS
TTTAGCTTGCGAAGAATCCC+GGG 0.534568 4_3:+7954377 Msa0627600:CDS
TTTCCTGCCTGATGAGACCT+TGG 0.536083 4_3:-7953352 None:intergenic
AAGTAGTTCCAAGGTCTCAT+CGG 0.536913 4_3:+7953434 Msa0627600:CDS
GAAGGGAGCTGTGTTAATGA+AGG 0.538115 4_3:+7953924 Msa0627600:CDS
GGGTGTGGTAACTTTGGATA+CGG 0.539320 4_3:+7952867 Msa0627600:CDS
TGAACCTGCAAAACTGGCAT+TGG 0.539713 4_3:+7952843 Msa0627600:CDS
TCAGGCAGGAAAGTAGTTCA+AGG 0.539738 4_3:+7953363 Msa0627600:CDS
TACTTTGAAGGAGGATCCCA+TGG 0.541291 4_3:+7952486 Msa0627600:CDS
GATAAAACTTCCTGAAGGGA+TGG 0.541390 4_3:-7954846 None:intergenic
ATGAGAATGACTCAGTGGCC+AGG 0.542434 4_3:+7953766 Msa0627600:CDS
CGGAACGAAAAGGAAAGAAA+GGG 0.542783 4_3:+7953489 Msa0627600:CDS
AAGGAAGCTGAACAAAGAAC+CGG 0.544426 4_3:+7954899 Msa0627600:CDS
GTCTCATCGGGCAGGAAAGT+AGG 0.544739 4_3:+7953447 Msa0627600:CDS
AAATCTTTCTATGAAAAGCA+TGG 0.545950 4_3:-7953818 None:intergenic
TGGCATGGAAACTATGGATA+CGG 0.546219 4_3:+7952573 Msa0627600:CDS
GATACGGGGCTATGAATCAA+TGG 0.551635 4_3:+7954262 Msa0627600:CDS
TTTATGTAGTTGAGTCATGT+TGG 0.552455 4_3:+7954318 Msa0627600:CDS
GGCACTCATCCTGACTGAGA+CGG 0.553076 4_3:-7953116 None:intergenic
TCATCACCAACTTCAACCCC+TGG 0.553210 4_3:-7953969 None:intergenic
ATTGGCGGGTGTGGTAACTT+TGG 0.553345 4_3:+7952861 Msa0627600:CDS
AGCCTCCTTCATACAAGCAC+CGG 0.554334 4_3:-7953016 None:intergenic
TAAATCAGGACGGAACGAAA+AGG 0.554578 4_3:+7953479 Msa0627600:CDS
ATTCAGTACACCTTTCGACT+TGG 0.555108 4_3:-7953556 None:intergenic
TAACGATGAACCTGCAAAAG+TGG 0.556879 4_3:+7952543 Msa0627600:CDS
TCTTATCTGATCAAGTAGAT+GGG 0.557317 4_3:+7952509 Msa0627600:CDS
CAACTAGTATTGTTTCTTCG+GGG 0.557635 4_3:+7954084 Msa0627600:CDS
AAAACTGGCATTGGCGGGTG+TGG 0.558834 4_3:+7952852 Msa0627600:CDS
AGGGAGCTGTGTTAATGAAG+GGG 0.559797 4_3:+7953926 Msa0627600:CDS
TTCTAAGGAAGTGGTTAAAG+CGG 0.560454 4_3:+7953296 Msa0627600:CDS
AACTAGTATTGTTTCTTCGG+GGG 0.564319 4_3:+7954085 Msa0627600:CDS
GTTCCAAGGTCTCATCGGGC+AGG 0.565288 4_3:+7953439 Msa0627600:CDS
CACAGATAAAACTTCCTGAA+GGG 0.565553 4_3:-7954850 None:intergenic
ATGGTGTTCACAGCACATAT+CGG 0.565881 4_3:-7954500 None:intergenic
GATACGGAATTTGCGACAGA+AGG 0.568390 4_3:+7952883 Msa0627600:CDS
GGTTATGTATTTAAATGTAG+GGG 0.572990 4_3:-7954537 None:intergenic
AAGAAACAATACTAGTTGCA+AGG 0.576224 4_3:-7954079 None:intergenic
TCACAGATAAAACTTCCTGA+AGG 0.579555 4_3:-7954851 None:intergenic
GTTCCAAGGTCTCATCAGGC+AGG 0.585792 4_3:+7953349 Msa0627600:CDS
ATATCTTGGGATCTGTTCCA+GGG 0.585881 4_3:+7953952 Msa0627600:CDS
AAATTGTAGTTCTGATGACA+TGG 0.587546 4_3:+7953614 Msa0627600:CDS
TCAAAGGCATCGTATCCAGC+TGG 0.588086 4_3:+7952934 Msa0627600:CDS
AACTGAAGGCTGTAGTCTGA+AGG 0.588098 4_3:+7952765 Msa0627600:CDS
CCTGCAAAACTGGCATTGGC+GGG 0.589355 4_3:+7952847 Msa0627600:CDS
AGGCAAGCTCTGGTTGACCC+GGG 0.589790 4_3:-7954394 None:intergenic
ACTAGTATTGTTTCTTCGGG+GGG 0.593022 4_3:+7954086 Msa0627600:CDS
TATGTCAGCTCTTGCAAGGG+AGG 0.595124 4_3:-7955187 None:intergenic
AAAACTTGAAAGTAGTTCCA+AGG 0.596538 4_3:+7953335 Msa0627600:CDS
ACTGTTCAAGATGATTCTGA+AGG 0.600204 4_3:+7953219 Msa0627600:CDS
GTTATGTATTTAAATGTAGG+GGG 0.600728 4_3:-7954536 None:intergenic
CGGGGCTATGAATCAATGGA+TGG 0.606352 4_3:+7954266 Msa0627600:CDS
TTCCGGTGCTTGTATGAAGG+AGG 0.609421 4_3:+7953014 Msa0627600:CDS
TGCTGATGGTACGAGTGTTG+AGG 0.609913 4_3:+7952345 Msa0627600:CDS
CACTCATCCTGACTGAGACG+GGG 0.610274 4_3:-7953114 None:intergenic
AAAACTCGAAAGTAGTTCCA+AGG 0.612216 4_3:+7953425 Msa0627600:CDS
GTGTCGAAGATATTTCCTAT+GGG 0.615325 4_3:+7954465 Msa0627600:CDS
AGATTTATCCTATATATCAA+AGG 0.619809 4_3:+7952918 Msa0627600:CDS
AAAAGTGGAATTGGTTGGCA+TGG 0.620927 4_3:+7952558 Msa0627600:CDS
CTTATCTGATCAAGTAGATG+GGG 0.627230 4_3:+7952510 Msa0627600:CDS
AAGTTCAAGTGAAGTAGTGG+AGG 0.627990 4_3:+7955012 Msa0627600:CDS
GGACCACACTCATAGACTAG+AGG 0.629150 4_3:-7954710 None:intergenic
GGCATCGTATCCAGCTGGCG+AGG 0.630693 4_3:+7952939 Msa0627600:CDS
GATTCCATTTAATCATAATG+GGG 0.631488 4_3:+7954670 Msa0627600:CDS
CTTGGTCGTAGTAATTTGAG+TGG 0.634936 4_3:+7953741 Msa0627600:CDS
CTGTTCAAGATGATTCTGAA+GGG 0.636210 4_3:+7953220 Msa0627600:CDS
GAAGATCAAAAGCTTGAAAG+GGG 0.636952 4_3:+7954191 Msa0627600:CDS
ACTTGATCAGATAAGACCAT+GGG 0.639082 4_3:-7952502 None:intergenic
CAGTCAGGATGAGTGCCGAA+AGG 0.642494 4_3:+7953122 Msa0627600:CDS
ACATAATCATCATCATCATG+AGG 0.642724 4_3:+7953263 Msa0627600:CDS
CCTGCAAAAGTGGAATTGGT+TGG 0.646230 4_3:+7952553 Msa0627600:CDS
TCGTATGTCAGCTCTTGCAA+GGG 0.649908 4_3:-7955190 None:intergenic
AAGTGACTGTACTTTGAAGG+AGG 0.650182 4_3:+7952477 Msa0627600:CDS
CCGCTCAGTTTGGTAATGTG+GGG 0.650291 4_3:+7955056 Msa0627600:CDS
ACATTCAGGATATATCATCT+CGG 0.654068 4_3:-7954558 None:intergenic
TACTTGATCAGATAAGACCA+TGG 0.655790 4_3:-7952503 None:intergenic
AAAACTGCTACCAAGTCGAA+AGG 0.659857 4_3:+7953546 Msa0627600:CDS
TTATGATCATCAAGACAGCA+GGG 0.660006 4_3:+7955129 Msa0627600:CDS
GATACAGTTCGTGATTCCGA+TGG 0.661038 4_3:+7955229 Msa0627600:CDS
CTCAAATTACTACGACCAAG+AGG 0.664835 4_3:-7953738 None:intergenic
ACGAGTGTTGAGGATAAGAG+TGG 0.665431 4_3:+7952355 Msa0627600:CDS
TGCTTTGAAGAACAGTAGTG+AGG 0.666121 4_3:+7954220 Msa0627600:CDS
TATCTTGGGATCTGTTCCAG+GGG 0.671761 4_3:+7953953 Msa0627600:CDS
GTTCTGTGGAATGTACTGGT+AGG 0.675695 4_3:+7955281 Msa0627600:CDS
CAGTGGCCAGGAATAAAGTG+AGG 0.677717 4_3:+7953778 Msa0627600:CDS
TATCTGTGAATATATTGGCG+AGG 0.678899 4_3:+7954865 Msa0627600:CDS
GCAGCAAATAACATGATGTG+AGG 0.681849 4_3:-7955154 None:intergenic
GGCAGGATATAGGGCCACGT+GGG 0.686351 4_3:+7954339 Msa0627600:CDS
AAGCCTCTAGTCTATGAGTG+TGG 0.686595 4_3:+7954707 Msa0627600:CDS
TTGATATATACAGGGCAGGG+TGG 0.688777 4_3:+7954140 Msa0627600:CDS
GTTTGATGTCTAAATCAGGA+CGG 0.690095 4_3:+7953469 Msa0627600:CDS
AATTGTAGTTCTGATGACAT+GGG 0.693133 4_3:+7953615 Msa0627600:CDS
TGGCAGGATATAGGGCCACG+TGG 0.698447 4_3:+7954338 Msa0627600:CDS
ATTCTGAGCATAAAGATTAG+GGG 0.715506 4_3:-7955101 None:intergenic
CCCCACATTACCAAACTGAG+CGG 0.724747 4_3:-7955056 None:intergenic
CTTCATCGCCAGATTCAGGG+TGG 0.729437 4_3:+7954026 Msa0627600:CDS
TTATAAACCAGCTTCCCACG+TGG 0.745113 4_3:-7954353 None:intergenic
AAATTGATGAGATGAGACCA+CGG 0.746618 4_3:-7952635 None:intergenic
TGGTCATGAGAATGACTCAG+TGG 0.759725 4_3:+7953761 Msa0627600:CDS
AATATTGATATTGGACAACG+AGG 0.767583 4_3:-7952986 None:intergenic
AATTCTGTTAGAGTGATACG+GGG 0.776687 4_3:+7954248 Msa0627600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTAAAACCAATTCAA+TGG + chr4_3:7954799-7954818 Msa0627600:CDS 15.0%
!!! ATTTTTAAAACCAATTCAAT+GGG + chr4_3:7954800-7954819 Msa0627600:CDS 15.0%
!!! ATAGGATAAATCTTGTTTTA+CGG - chr4_3:7952911-7952930 None:intergenic 20.0%
!! AGATTTATCCTATATATCAA+AGG + chr4_3:7952918-7952937 Msa0627600:CDS 20.0%
!!! TTTTCTCTTTTCTTTTTCAA+CGG - chr4_3:7953597-7953616 None:intergenic 20.0%
!!! AGTGTTTGTTATTTTCATTA+GGG - chr4_3:7953674-7953693 None:intergenic 20.0%
!!! AAGTGTTTGTTATTTTCATT+AGG - chr4_3:7953675-7953694 None:intergenic 20.0%
!! AGAATAGAGCTTAATATAAT+TGG + chr4_3:7954002-7954021 Msa0627600:CDS 20.0%
!! AGAAAGATATATGTTTATGA+TGG + chr4_3:7954293-7954312 Msa0627600:CDS 20.0%
!! AGATTCCATTTAATCATAAT+GGG + chr4_3:7954669-7954688 Msa0627600:CDS 20.0%
!!! AGTTTTATCTGTGAATATAT+TGG + chr4_3:7954860-7954879 Msa0627600:CDS 20.0%
!!! TGATGATGATTATGTTTTTC+AGG - chr4_3:7953258-7953277 None:intergenic 25.0%
! TGAGGTTAACATAAATTCTA+AGG + chr4_3:7953281-7953300 Msa0627600:CDS 25.0%
!! TAACATAAATTCTAAGGAAG+TGG + chr4_3:7953287-7953306 Msa0627600:CDS 25.0%
! AAATCTTTCTATGAAAAGCA+TGG - chr4_3:7953821-7953840 None:intergenic 25.0%
!! TTTTCATAGAAAGATTTTGC+AGG + chr4_3:7953824-7953843 Msa0627600:CDS 25.0%
!! ACTTCTTTCATATTTGACTT+TGG - chr4_3:7953864-7953883 None:intergenic 25.0%
! CAAATATGAAAGAAGTAAAG+AGG + chr4_3:7953868-7953887 Msa0627600:CDS 25.0%
!!! TCAGATGTTTTGATATATAC+AGG + chr4_3:7954131-7954150 Msa0627600:CDS 25.0%
!!! CAGATGTTTTGATATATACA+GGG + chr4_3:7954132-7954151 Msa0627600:CDS 25.0%
! AAAAAGTTCAAAACAAGAGA+AGG + chr4_3:7954437-7954456 Msa0627600:CDS 25.0%
! GTTATGTATTTAAATGTAGG+GGG - chr4_3:7954539-7954558 None:intergenic 25.0%
! GGTTATGTATTTAAATGTAG+GGG - chr4_3:7954540-7954559 None:intergenic 25.0%
! CGGTTATGTATTTAAATGTA+GGG - chr4_3:7954541-7954560 None:intergenic 25.0%
! TCGGTTATGTATTTAAATGT+AGG - chr4_3:7954542-7954561 None:intergenic 25.0%
!! TTAGTACAATTACATCCTTT+TGG - chr4_3:7954599-7954618 None:intergenic 25.0%
! AAAGGATGTAATTGTACTAA+TGG + chr4_3:7954599-7954618 Msa0627600:CDS 25.0%
! GAGATTCCATTTAATCATAA+TGG + chr4_3:7954668-7954687 Msa0627600:CDS 25.0%
! GATTCCATTTAATCATAATG+GGG + chr4_3:7954670-7954689 Msa0627600:CDS 25.0%
! ATATCCCCATTATGATTAAA+TGG - chr4_3:7954677-7954696 None:intergenic 25.0%
! GTTGAATATTTATTCCAAGT+TGG - chr4_3:7954775-7954794 None:intergenic 25.0%
! AACAACAATAATCTTTGTGA+TGG + chr4_3:7954959-7954978 Msa0627600:CDS 25.0%
! TCGTTCAACTCAAAATTTTG+AGG - chr4_3:7952424-7952443 None:intergenic 30.0%
!!! TCAAAATTTTGAGTTGAACG+AGG + chr4_3:7952423-7952442 Msa0627600:CDS 30.0%
TCTTATCTGATCAAGTAGAT+GGG + chr4_3:7952509-7952528 Msa0627600:CDS 30.0%
!! TATTTTAGAGACTTTCGATG+TGG + chr4_3:7952666-7952685 Msa0627600:CDS 30.0%
AGTGATTTCATCTCATCAAA+TGG + chr4_3:7952798-7952817 Msa0627600:CDS 30.0%
ATACGATGCCTTTGATATAT+AGG - chr4_3:7952929-7952948 None:intergenic 30.0%
AATATTGATATTGGACAACG+AGG - chr4_3:7952989-7953008 None:intergenic 30.0%
TCGTTGTCCAATATCAATAT+TGG + chr4_3:7952988-7953007 Msa0627600:CDS 30.0%
TTGTCCAATATCAATATTGG+TGG + chr4_3:7952991-7953010 Msa0627600:CDS 30.0%
! AATATCAATATTGGTGGTTC+CGG + chr4_3:7952997-7953016 Msa0627600:CDS 30.0%
! AGAGATTTTCCAAGTTTATG+TGG + chr4_3:7953081-7953100 Msa0627600:CDS 30.0%
ACATAATCATCATCATCATG+AGG + chr4_3:7953263-7953282 Msa0627600:CDS 30.0%
AAAACTTGAAAGTAGTTCCA+AGG + chr4_3:7953335-7953354 Msa0627600:CDS 30.0%
!! AAATTGTAGTTCTGATGACA+TGG + chr4_3:7953614-7953633 Msa0627600:CDS 30.0%
!! AATTGTAGTTCTGATGACAT+GGG + chr4_3:7953615-7953634 Msa0627600:CDS 30.0%
!!! ATTTGACTTTGGTTTTGCTT+CGG - chr4_3:7953853-7953872 None:intergenic 30.0%
AAGAAACAATACTAGTTGCA+AGG - chr4_3:7954082-7954101 None:intergenic 30.0%
! TGCAACTAGTATTGTTTCTT+CGG + chr4_3:7954082-7954101 Msa0627600:CDS 30.0%
AGAAGATCAAAAGCTTGAAA+GGG + chr4_3:7954190-7954209 Msa0627600:CDS 30.0%
AGAATTCTGTTAGAGTGATA+CGG + chr4_3:7954246-7954265 Msa0627600:CDS 30.0%
TTTATGTAGTTGAGTCATGT+TGG + chr4_3:7954318-7954337 Msa0627600:CDS 30.0%
ACATTCAGGATATATCATCT+CGG - chr4_3:7954561-7954580 None:intergenic 30.0%
! TACAATTACATCCTTTTGGA+GGG - chr4_3:7954595-7954614 None:intergenic 30.0%
TTAAAACCAATTCAATGGGA+TGG + chr4_3:7954804-7954823 Msa0627600:CDS 30.0%
TAAAACCAATTCAATGGGAT+GGG + chr4_3:7954805-7954824 Msa0627600:CDS 30.0%
GAAAAGATACTCATCATTAC+CGG - chr4_3:7954921-7954940 None:intergenic 30.0%
! GATGAGTATCTTTTCGATAT+CGG + chr4_3:7954926-7954945 Msa0627600:CDS 30.0%
ATTCTGAGCATAAAGATTAG+GGG - chr4_3:7955104-7955123 None:intergenic 30.0%
CATTCTGAGCATAAAGATTA+GGG - chr4_3:7955105-7955124 None:intergenic 30.0%
ACATTCTGAGCATAAAGATT+AGG - chr4_3:7955106-7955125 None:intergenic 30.0%
! CTTCTTTTTGATATTGCCAT+CGG - chr4_3:7955248-7955267 None:intergenic 30.0%
!!! AAAAAGAAGTACTGCTTTTG+TGG + chr4_3:7955259-7955278 Msa0627600:CDS 30.0%
AACAAGTGACTGTACTTTGA+AGG + chr4_3:7952474-7952493 Msa0627600:CDS 35.0%
ACTTGATCAGATAAGACCAT+GGG - chr4_3:7952505-7952524 None:intergenic 35.0%
TACTTGATCAGATAAGACCA+TGG - chr4_3:7952506-7952525 None:intergenic 35.0%
GTCTTATCTGATCAAGTAGA+TGG + chr4_3:7952508-7952527 Msa0627600:CDS 35.0%
CTTATCTGATCAAGTAGATG+GGG + chr4_3:7952510-7952529 Msa0627600:CDS 35.0%
TGAAGACTGTACCTTGAAAA+AGG + chr4_3:7952606-7952625 Msa0627600:CDS 35.0%
!! CACGGTATATTCCTTTTTCA+AGG - chr4_3:7952620-7952639 None:intergenic 35.0%
CTTGAAAAAGGAATATACCG+TGG + chr4_3:7952618-7952637 Msa0627600:CDS 35.0%
AAATTGATGAGATGAGACCA+CGG - chr4_3:7952638-7952657 None:intergenic 35.0%
ACGTTGAAAGTCTCCAAAAT+AGG - chr4_3:7952736-7952755 None:intergenic 35.0%
!! TATTTTGGAGACTTTCAACG+TGG + chr4_3:7952735-7952754 Msa0627600:CDS 35.0%
TCAAATGGATGAGTCTACTT+TGG + chr4_3:7952813-7952832 Msa0627600:CDS 35.0%
GGAACCACCAATATTGATAT+TGG - chr4_3:7952998-7953017 None:intergenic 35.0%
! TGAAGGAGGCTTTAACTAAA+AGG + chr4_3:7953028-7953047 Msa0627600:CDS 35.0%
!!! AACACTGCAACTTTTTTACG+AGG - chr4_3:7953060-7953079 None:intergenic 35.0%
! GATTTTCCAAGTTTATGTGG+AGG + chr4_3:7953084-7953103 Msa0627600:CDS 35.0%
TCAAAGAAGAAAGCTCCTTT+CGG - chr4_3:7953140-7953159 None:intergenic 35.0%
ACTGTTCAAGATGATTCTGA+AGG + chr4_3:7953219-7953238 Msa0627600:CDS 35.0%
CTGTTCAAGATGATTCTGAA+GGG + chr4_3:7953220-7953239 Msa0627600:CDS 35.0%
! TTCTAAGGAAGTGGTTAAAG+CGG + chr4_3:7953296-7953315 Msa0627600:CDS 35.0%
GAAAGTAGTTCAAGGTTTGA+TGG + chr4_3:7953371-7953390 Msa0627600:CDS 35.0%
AAAACTCGAAAGTAGTTCCA+AGG + chr4_3:7953425-7953444 Msa0627600:CDS 35.0%
GTAGGTTTGATGTCTAAATC+AGG + chr4_3:7953465-7953484 Msa0627600:CDS 35.0%
GTTTGATGTCTAAATCAGGA+CGG + chr4_3:7953469-7953488 Msa0627600:CDS 35.0%
!! GAAAATTGATAATGTCCAGC+TGG + chr4_3:7953515-7953534 Msa0627600:CDS 35.0%
! AAAGGTGTACTGAATCATTC+TGG + chr4_3:7953564-7953583 Msa0627600:CDS 35.0%
AAGGTGTACTGAATCATTCT+GGG + chr4_3:7953565-7953584 Msa0627600:CDS 35.0%
! AGCGTAAATGTTTTTCCTCT+TGG + chr4_3:7953723-7953742 Msa0627600:CDS 35.0%
! TGTTTTCCTCACTTTATTCC+TGG - chr4_3:7953787-7953806 None:intergenic 35.0%
! TTCTATGAAAAGCATGGAAC+AGG - chr4_3:7953815-7953834 None:intergenic 35.0%
TAATGAAGGGGAGAATATCT+TGG + chr4_3:7953938-7953957 Msa0627600:CDS 35.0%
AATGAAGGGGAGAATATCTT+GGG + chr4_3:7953939-7953958 Msa0627600:CDS 35.0%
! GCAACTAGTATTGTTTCTTC+GGG + chr4_3:7954083-7954102 Msa0627600:CDS 35.0%
! CAACTAGTATTGTTTCTTCG+GGG + chr4_3:7954084-7954103 Msa0627600:CDS 35.0%
! AACTAGTATTGTTTCTTCGG+GGG + chr4_3:7954085-7954104 Msa0627600:CDS 35.0%
!!! TGTTTTGATATATACAGGGC+AGG + chr4_3:7954136-7954155 Msa0627600:CDS 35.0%
!! GTTTTGATATATACAGGGCA+GGG + chr4_3:7954137-7954156 Msa0627600:CDS 35.0%
! CTTTCAAGCTTTTGATCTTC+TGG - chr4_3:7954191-7954210 None:intergenic 35.0%
CAGAAGATCAAAAGCTTGAA+AGG + chr4_3:7954189-7954208 Msa0627600:CDS 35.0%
GAAGATCAAAAGCTTGAAAG+GGG + chr4_3:7954191-7954210 Msa0627600:CDS 35.0%
GAATTCTGTTAGAGTGATAC+GGG + chr4_3:7954247-7954266 Msa0627600:CDS 35.0%
AATTCTGTTAGAGTGATACG+GGG + chr4_3:7954248-7954267 Msa0627600:CDS 35.0%
CAATTTCTTCACTTCCTTCA+AGG - chr4_3:7954417-7954436 None:intergenic 35.0%
TGTGTCGAAGATATTTCCTA+TGG + chr4_3:7954464-7954483 Msa0627600:CDS 35.0%
GTGTCGAAGATATTTCCTAT+GGG + chr4_3:7954465-7954484 Msa0627600:CDS 35.0%
! GTACAATTACATCCTTTTGG+AGG - chr4_3:7954596-7954615 None:intergenic 35.0%
GTACGCAACAACATTTCTTA+TGG - chr4_3:7954634-7954653 None:intergenic 35.0%
TGTTGTTGCGTACTCAAAAA+TGG + chr4_3:7954641-7954660 Msa0627600:CDS 35.0%
! CAAGTTGGCTAACTCTATTA+TGG - chr4_3:7954760-7954779 None:intergenic 35.0%
CATAATAGAGTTAGCCAACT+TGG + chr4_3:7954758-7954777 Msa0627600:CDS 35.0%
AAAACCAATTCAATGGGATG+GGG + chr4_3:7954806-7954825 Msa0627600:CDS 35.0%
CACAGATAAAACTTCCTGAA+GGG - chr4_3:7954853-7954872 None:intergenic 35.0%
TCACAGATAAAACTTCCTGA+AGG - chr4_3:7954854-7954873 None:intergenic 35.0%
TATCTGTGAATATATTGGCG+AGG + chr4_3:7954865-7954884 Msa0627600:CDS 35.0%
TGAGTCAGAATCTGGAAAAA+GGG - chr4_3:7954993-7955012 None:intergenic 35.0%
TTGAGTCAGAATCTGGAAAA+AGG - chr4_3:7954994-7955013 None:intergenic 35.0%
! TGCTGTCTTGATGATCATAA+AGG - chr4_3:7955129-7955148 None:intergenic 35.0%
TTTATGATCATCAAGACAGC+AGG + chr4_3:7955128-7955147 Msa0627600:CDS 35.0%
TTATGATCATCAAGACAGCA+GGG + chr4_3:7955129-7955148 Msa0627600:CDS 35.0%
GATAAGAGTGGCAAAGATTC+AGG + chr4_3:7952367-7952386 Msa0627600:CDS 40.0%
TGAGGATACGTTTCTTCGTT+GGG - chr4_3:7952406-7952425 None:intergenic 40.0%
TTGAGGATACGTTTCTTCGT+TGG - chr4_3:7952407-7952426 None:intergenic 40.0%
! TGAGTTGAACGAGGATTTGT+TGG + chr4_3:7952432-7952451 Msa0627600:CDS 40.0%
! AAGTGACTGTACTTTGAAGG+AGG + chr4_3:7952477-7952496 Msa0627600:CDS 40.0%
TCAAGTAGATGGGGATAGTT+TGG + chr4_3:7952519-7952538 Msa0627600:CDS 40.0%
TAACGATGAACCTGCAAAAG+TGG + chr4_3:7952543-7952562 Msa0627600:CDS 40.0%
TGAACCTGCAAAAGTGGAAT+TGG + chr4_3:7952549-7952568 Msa0627600:CDS 40.0%
AAAAGTGGAATTGGTTGGCA+TGG + chr4_3:7952558-7952577 Msa0627600:CDS 40.0%
ATTGGTTGGCATGGAAACTA+TGG + chr4_3:7952567-7952586 Msa0627600:CDS 40.0%
TGGCATGGAAACTATGGATA+CGG + chr4_3:7952573-7952592 Msa0627600:CDS 40.0%
AACGTGGAATTTGCAACTGA+AGG + chr4_3:7952751-7952770 Msa0627600:CDS 40.0%
AAACGATGAACCTGCAAAAC+TGG + chr4_3:7952837-7952856 Msa0627600:CDS 40.0%
! TTCTGCTTCTTTTACGTCAG+TGG - chr4_3:7953175-7953194 None:intergenic 40.0%
! TTTGATGGCAGTGGTTAAAG+AGG + chr4_3:7953386-7953405 Msa0627600:CDS 40.0%
AAGTAGTTCCAAGGTCTCAT+CGG + chr4_3:7953344-7953363 Msa0627600:CDS 40.0%
TAAATCAGGACGGAACGAAA+AGG + chr4_3:7953479-7953498 Msa0627600:CDS 40.0%
ACGGAACGAAAAGGAAAGAA+AGG + chr4_3:7953488-7953507 Msa0627600:CDS 40.0%
CGGAACGAAAAGGAAAGAAA+GGG + chr4_3:7953489-7953508 Msa0627600:CDS 40.0%
AAAACTGCTACCAAGTCGAA+AGG + chr4_3:7953546-7953565 Msa0627600:CDS 40.0%
ATTCAGTACACCTTTCGACT+TGG - chr4_3:7953559-7953578 None:intergenic 40.0%
! CGCTCGAACTATGTGATTTT+GGG - chr4_3:7953707-7953726 None:intergenic 40.0%
! ACGCTCGAACTATGTGATTT+TGG - chr4_3:7953708-7953727 None:intergenic 40.0%
CTCAAATTACTACGACCAAG+AGG - chr4_3:7953741-7953760 None:intergenic 40.0%
CTTGGTCGTAGTAATTTGAG+TGG + chr4_3:7953741-7953760 Msa0627600:CDS 40.0%
ACAAGCTGCGAAAAAGCTTA+AGG + chr4_3:7953899-7953918 Msa0627600:CDS 40.0%
CGAAAAAGCTTAAGGAGGAA+GGG + chr4_3:7953907-7953926 Msa0627600:CDS 40.0%
AAGGGAGCTGTGTTAATGAA+GGG + chr4_3:7953925-7953944 Msa0627600:CDS 40.0%
AATATCTTGGGATCTGTTCC+AGG + chr4_3:7953951-7953970 Msa0627600:CDS 40.0%
ATATCTTGGGATCTGTTCCA+GGG + chr4_3:7953952-7953971 Msa0627600:CDS 40.0%
AATCTATACCACCCTGAATC+TGG - chr4_3:7954037-7954056 None:intergenic 40.0%
! ACTAGTATTGTTTCTTCGGG+GGG + chr4_3:7954086-7954105 Msa0627600:CDS 40.0%
!! TGCTTTGAAGAACAGTAGTG+AGG + chr4_3:7954220-7954239 Msa0627600:CDS 40.0%
AGTCATGTTGGCAGGATATA+GGG + chr4_3:7954330-7954349 Msa0627600:CDS 40.0%
! CGGAATTTTCTCTTTCCCAT+AGG - chr4_3:7954483-7954502 None:intergenic 40.0%
ATGGTGTTCACAGCACATAT+CGG - chr4_3:7954503-7954522 None:intergenic 40.0%
GGGATAAGATTGCAACATTC+AGG - chr4_3:7954575-7954594 None:intergenic 40.0%
TGCAATCTTATCCCTCCAAA+AGG + chr4_3:7954581-7954600 Msa0627600:CDS 40.0%
TGTTGCGTACTCAAAAATGG+AGG + chr4_3:7954644-7954663 Msa0627600:CDS 40.0%
GTTGCGTACTCAAAAATGGA+GGG + chr4_3:7954645-7954664 Msa0627600:CDS 40.0%
TTGCGTACTCAAAAATGGAG+GGG + chr4_3:7954646-7954665 Msa0627600:CDS 40.0%
! CTCTATTATGGCAGGTTGAA+GGG - chr4_3:7954748-7954767 None:intergenic 40.0%
! ACTCTATTATGGCAGGTTGA+AGG - chr4_3:7954749-7954768 None:intergenic 40.0%
TTGGCTAACTCTATTATGGC+AGG - chr4_3:7954756-7954775 None:intergenic 40.0%
TCCTTAAATTCCATCCCTTC+AGG + chr4_3:7954836-7954855 Msa0627600:CDS 40.0%
TCCTGAAGGGATGGAATTTA+AGG - chr4_3:7954840-7954859 None:intergenic 40.0%
GATAAAACTTCCTGAAGGGA+TGG - chr4_3:7954849-7954868 None:intergenic 40.0%
AAGGAAGCTGAACAAAGAAC+CGG + chr4_3:7954899-7954918 Msa0627600:CDS 40.0%
CTTGAACTTGAGTCAGAATC+TGG - chr4_3:7955001-7955020 None:intergenic 40.0%
CTCAAGTTCAAGTGAAGTAG+TGG + chr4_3:7955009-7955028 Msa0627600:CDS 40.0%
AAGTTCAAGTGAAGTAGTGG+AGG + chr4_3:7955012-7955031 Msa0627600:CDS 40.0%
AAAGATTAGGGGAGCAACTA+TGG - chr4_3:7955093-7955112 None:intergenic 40.0%
GCAGCAAATAACATGATGTG+AGG - chr4_3:7955157-7955176 None:intergenic 40.0%
ACTCGTACCATCAGCAGAAA+CGG - chr4_3:7952341-7952360 None:intergenic 45.0%
!! ACGAGTGTTGAGGATAAGAG+TGG + chr4_3:7952355-7952374 Msa0627600:CDS 45.0%
! TACTTTGAAGGAGGATCCCA+TGG + chr4_3:7952486-7952505 Msa0627600:CDS 45.0%
!! CCAACCAATTCCACTTTTGC+AGG - chr4_3:7952556-7952575 None:intergenic 45.0%
CCTGCAAAAGTGGAATTGGT+TGG + chr4_3:7952553-7952572 Msa0627600:CDS 45.0%
! CGAAGACGATGTGCCTATTT+TGG + chr4_3:7952720-7952739 Msa0627600:CDS 45.0%
AACTGAAGGCTGTAGTCTGA+AGG + chr4_3:7952765-7952784 Msa0627600:CDS 45.0%
TGAACCTGCAAAACTGGCAT+TGG + chr4_3:7952843-7952862 Msa0627600:CDS 45.0%
GGGTGTGGTAACTTTGGATA+CGG + chr4_3:7952867-7952886 Msa0627600:CDS 45.0%
GATACGGAATTTGCGACAGA+AGG + chr4_3:7952883-7952902 Msa0627600:CDS 45.0%
GCATTGCCTCCACATAAACT+TGG - chr4_3:7953093-7953112 None:intergenic 45.0%
AGTAGTTCCAAGGTCTCATC+AGG + chr4_3:7953345-7953364 Msa0627600:CDS 45.0%
TCAGGCAGGAAAGTAGTTCA+AGG + chr4_3:7953363-7953382 Msa0627600:CDS 45.0%
! AGTTCAAGGTTTGATGGCAG+TGG + chr4_3:7953377-7953396 Msa0627600:CDS 45.0%
AGTAGTTCCAAGGTCTCATC+GGG + chr4_3:7953345-7953364 Msa0627600:CDS 45.0%
!! TTGATAATGTCCAGCTGGAC+AGG + chr4_3:7953520-7953539 Msa0627600:CDS 45.0%
TGGTCATGAGAATGACTCAG+TGG + chr4_3:7953761-7953780 Msa0627600:CDS 45.0%
AGCTGCGAAAAAGCTTAAGG+AGG + chr4_3:7953902-7953921 Msa0627600:CDS 45.0%
GCGAAAAAGCTTAAGGAGGA+AGG + chr4_3:7953906-7953925 Msa0627600:CDS 45.0%
GAAGGGAGCTGTGTTAATGA+AGG + chr4_3:7953924-7953943 Msa0627600:CDS 45.0%
AGGGAGCTGTGTTAATGAAG+GGG + chr4_3:7953926-7953945 Msa0627600:CDS 45.0%
TATCTTGGGATCTGTTCCAG+GGG + chr4_3:7953953-7953972 Msa0627600:CDS 45.0%
TTGATATATACAGGGCAGGG+TGG + chr4_3:7954140-7954159 Msa0627600:CDS 45.0%
GATACGGGGCTATGAATCAA+TGG + chr4_3:7954262-7954281 Msa0627600:CDS 45.0%
TGTAGTTGAGTCATGTTGGC+AGG + chr4_3:7954322-7954341 Msa0627600:CDS 45.0%
GAGTCATGTTGGCAGGATAT+AGG + chr4_3:7954329-7954348 Msa0627600:CDS 45.0%
TTATAAACCAGCTTCCCACG+TGG - chr4_3:7954356-7954375 None:intergenic 45.0%
!! GTTTAGCTTGCGAAGAATCC+CGG + chr4_3:7954376-7954395 Msa0627600:CDS 45.0%
!! TTTAGCTTGCGAAGAATCCC+GGG + chr4_3:7954377-7954396 Msa0627600:CDS 45.0%
AGGGGGTTTCTCGTTATCTA+TGG - chr4_3:7954522-7954541 None:intergenic 45.0%
AAGCCTCTAGTCTATGAGTG+TGG + chr4_3:7954707-7954726 Msa0627600:CDS 45.0%
!! GTTGAAGGGCACTTGCATTT+AGG - chr4_3:7954734-7954753 None:intergenic 45.0%
TACACCCCATCCCATTGAAT+TGG - chr4_3:7954813-7954832 None:intergenic 45.0%
TGGCGAGGTTCTTGAAGAAA+AGG + chr4_3:7954880-7954899 Msa0627600:CDS 45.0%
TCGTATGTCAGCTCTTGCAA+GGG - chr4_3:7955193-7955212 None:intergenic 45.0%
ATCGTATGTCAGCTCTTGCA+AGG - chr4_3:7955194-7955213 None:intergenic 45.0%
GATACAGTTCGTGATTCCGA+TGG + chr4_3:7955229-7955248 Msa0627600:CDS 45.0%
!! GTACTGCTTTTGTGGTTCTG+TGG + chr4_3:7955267-7955286 Msa0627600:CDS 45.0%
! TGTGGTTCTGTGGAATGTAC+TGG + chr4_3:7955277-7955296 Msa0627600:CDS 45.0%
! GTTCTGTGGAATGTACTGGT+AGG + chr4_3:7955281-7955300 Msa0627600:CDS 45.0%
GTTGCATCCGTTTCTGCTGA+TGG + chr4_3:7952331-7952350 Msa0627600:CDS 50.0%
! TGCTGATGGTACGAGTGTTG+AGG + chr4_3:7952345-7952364 Msa0627600:CDS 50.0%
! ACCTGCAAAACTGGCATTGG+CGG + chr4_3:7952846-7952865 Msa0627600:CDS 50.0%
! ATTGGCGGGTGTGGTAACTT+TGG + chr4_3:7952861-7952880 Msa0627600:CDS 50.0%
!! TCAAAGGCATCGTATCCAGC+TGG + chr4_3:7952934-7952953 Msa0627600:CDS 50.0%
TGGTTCCGGTGCTTGTATGA+AGG + chr4_3:7953011-7953030 Msa0627600:CDS 50.0%
TTCCGGTGCTTGTATGAAGG+AGG + chr4_3:7953014-7953033 Msa0627600:CDS 50.0%
AGCCTCCTTCATACAAGCAC+CGG - chr4_3:7953019-7953038 None:intergenic 50.0%
TTTCCTGCCTGATGAGACCT+TGG - chr4_3:7953355-7953374 None:intergenic 50.0%
!!! CAGTTTTAGACCTGTCCAGC+TGG - chr4_3:7953533-7953552 None:intergenic 50.0%
ATGAGAATGACTCAGTGGCC+AGG + chr4_3:7953766-7953785 Msa0627600:CDS 50.0%
CAGTGGCCAGGAATAAAGTG+AGG + chr4_3:7953778-7953797 Msa0627600:CDS 50.0%
TCTGTTCCAGGGGTTGAAGT+TGG + chr4_3:7953963-7953982 Msa0627600:CDS 50.0%
TCATCACCAACTTCAACCCC+TGG - chr4_3:7953972-7953991 None:intergenic 50.0%
CGGGGCTATGAATCAATGGA+TGG + chr4_3:7954266-7954285 Msa0627600:CDS 50.0%
TCAACCAGAGCTTGCCTTGA+AGG + chr4_3:7954400-7954419 Msa0627600:CDS 50.0%
ACTTCCTTCAAGGCAAGCTC+TGG - chr4_3:7954407-7954426 None:intergenic 50.0%
GGACCACACTCATAGACTAG+AGG - chr4_3:7954713-7954732 None:intergenic 50.0%
ACTATCGATGCCGCTCAGTT+TGG + chr4_3:7955046-7955065 Msa0627600:CDS 50.0%
!! TGCCGCTCAGTTTGGTAATG+TGG + chr4_3:7955054-7955073 Msa0627600:CDS 50.0%
!! GCCGCTCAGTTTGGTAATGT+GGG + chr4_3:7955055-7955074 Msa0627600:CDS 50.0%
CCCCACATTACCAAACTGAG+CGG - chr4_3:7955059-7955078 None:intergenic 50.0%
!! CCGCTCAGTTTGGTAATGTG+GGG + chr4_3:7955056-7955075 Msa0627600:CDS 50.0%
TATGTCAGCTCTTGCAAGGG+AGG - chr4_3:7955190-7955209 None:intergenic 50.0%
!! CCTGCAAAACTGGCATTGGC+GGG + chr4_3:7952847-7952866 Msa0627600:CDS 55.0%
!! AAAACTGGCATTGGCGGGTG+TGG + chr4_3:7952852-7952871 Msa0627600:CDS 55.0%
CACTCATCCTGACTGAGACG+GGG - chr4_3:7953117-7953136 None:intergenic 55.0%
GCACTCATCCTGACTGAGAC+GGG - chr4_3:7953118-7953137 None:intergenic 55.0%
GGCACTCATCCTGACTGAGA+CGG - chr4_3:7953119-7953138 None:intergenic 55.0%
!! CAGTCAGGATGAGTGCCGAA+AGG + chr4_3:7953122-7953141 Msa0627600:CDS 55.0%
GTTCCAAGGTCTCATCAGGC+AGG + chr4_3:7953349-7953368 Msa0627600:CDS 55.0%
TTTCCTGCCCGATGAGACCT+TGG - chr4_3:7953445-7953464 None:intergenic 55.0%
GTCTCATCGGGCAGGAAAGT+AGG + chr4_3:7953447-7953466 Msa0627600:CDS 55.0%
TGGCCTTCATCGCCAGATTC+AGG + chr4_3:7954022-7954041 Msa0627600:CDS 55.0%
GGCCTTCATCGCCAGATTCA+GGG + chr4_3:7954023-7954042 Msa0627600:CDS 55.0%
CACCCTGAATCTGGCGATGA+AGG - chr4_3:7954028-7954047 None:intergenic 55.0%
CTTCATCGCCAGATTCAGGG+TGG + chr4_3:7954026-7954045 Msa0627600:CDS 55.0%
! AAGGCAAGCTCTGGTTGACC+CGG - chr4_3:7954398-7954417 None:intergenic 55.0%
! CCCGCCAATGCCAGTTTTGC+AGG - chr4_3:7952850-7952869 None:intergenic 60.0%
CAATGCTCCCCGTCTCAGTC+AGG + chr4_3:7953107-7953126 Msa0627600:CDS 60.0%
GTTCCAAGGTCTCATCGGGC+AGG + chr4_3:7953439-7953458 Msa0627600:CDS 60.0%
TGGCAGGATATAGGGCCACG+TGG + chr4_3:7954338-7954357 Msa0627600:CDS 60.0%
GGCAGGATATAGGGCCACGT+GGG + chr4_3:7954339-7954358 Msa0627600:CDS 60.0%
TATAGGGCCACGTGGGAAGC+TGG + chr4_3:7954346-7954365 Msa0627600:CDS 60.0%
! AGGCAAGCTCTGGTTGACCC+GGG - chr4_3:7954397-7954416 None:intergenic 60.0%
GGCATCGTATCCAGCTGGCG+AGG + chr4_3:7952939-7952958 Msa0627600:CDS 65.0%
GACATAGCTGCCTCGCCAGC+TGG - chr4_3:7952952-7952971 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 7952307 7955312 7952307 ID=Msa0627600;Name=Msa0627600
chr4_3 mRNA 7952307 7955312 7952307 ID=Msa0627600-mRNA-1;Parent=Msa0627600;Name=Msa0627600-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|1001
chr4_3 exon 7952307 7955312 7952307 ID=Msa0627600-mRNA-1:exon:2279;Parent=Msa0627600-mRNA-1
chr4_3 CDS 7952307 7955312 7952307 ID=Msa0627600-mRNA-1:cds;Parent=Msa0627600-mRNA-1
Gene Sequence

>Msa0627600

ATGGAAAAGGGAGACTCAACTATTGTTGCATCCGTTTCTGCTGATGGTACGAGTGTTGAGGATAAGAGTGGCAAAGATTCAGGTGAAGCTGATAGTCCCAACGAAGAAACGTATCCTCAAAATTTTGAGTTGAACGAGGATTTGTTGGTTACAAACACTGTTGAACAAACAAGTGACTGTACTTTGAAGGAGGATCCCATGGTCTTATCTGATCAAGTAGATGGGGATAGTTTGGCTAACGATGAACCTGCAAAAGTGGAATTGGTTGGCATGGAAACTATGGATACGGAATTCGCAACTGAAGACTGTACCTTGAAAAAGGAATATACCGTGGTCTCATCTCATCAATTTGATGTGATTATTTTAGAGACTTTCGATGTGGAATTTGCAACTGAAAGCTGTAGTTTGAAGAACGAAGACGATGTGCCTATTTTGGAGACTTTCAACGTGGAATTTGCAACTGAAGGCTGTAGTCTGAAGGACGAAAATGCAGTGATTTCATCTCATCAAATGGATGAGTCTACTTTGGCAAACGATGAACCTGCAAAACTGGCATTGGCGGGTGTGGTAACTTTGGATACGGAATTTGCGACAGAAGGCTCCGTAAAACAAGATTTATCCTATATATCAAAGGCATCGTATCCAGCTGGCGAGGCAGCTATGTCTGCTGACTCAAAATCCTCGTTGTCCAATATCAATATTGGTGGTTCCGGTGCTTGTATGAAGGAGGCTTTAACTAAAAGGTATGCTCCTCGTAAAAAAGTTGCAGTGTTCAGAGATTTTCCAAGTTTATGTGGAGGCAATGCTCCCCGTCTCAGTCAGGATGAGTGCCGAAAGGAGCTTTCTTCTTTGAAAAAAGTTGCTGCCACTGACGTAAAAGAAGCAGAAAATAACAAGAGAAAGTTTGATAACACTGTTCAAGATGATTCTGAAGGGAACACTAAACTTCCTGAAAAACATAATCATCATCATCATGAGGTTAACATAAATTCTAAGGAAGTGGTTAAAGCGGAAAACATGAACACTGTAAAACTTGAAAGTAGTTCCAAGGTCTCATCAGGCAGGAAAGTAGTTCAAGGTTTGATGGCAGTGGTTAAAGAGGAAAACATGAACACTGTAAAACTCGAAAGTAGTTCCAAGGTCTCATCGGGCAGGAAAGTAGGTTTGATGTCTAAATCAGGACGGAACGAAAAGGAAAGAAAGGGAAAGAAAATTGATAATGTCCAGCTGGACAGGTCTAAAACTGCTACCAAGTCGAAAGGTGTACTGAATCATTCTGGGCAGCAGCCGTTGAAAAAGAAAAGAGAAAATTGTAGTTCTGATGACATGGGTCAATTAGTAACGTTAGAGAAGAGTTCTCAAGACCCTAATGAAAATAACAAACACTTTAAAAGTGTCCCAAAATCACATAGTTCGAGCGTAAATGTTTTTCCTCTTGGTCGTAGTAATTTGAGTGGTCATGAGAATGACTCAGTGGCCAGGAATAAAGTGAGGAAAACATTGCGCCTGTTCCATGCTTTTCATAGAAAGATTTTGCAGGAAGCCGAAGCAAAACCAAAGTCAAATATGAAAGAAGTAAAGAGGTTTGATTTACAAGCTGCGAAAAAGCTTAAGGAGGAAGGGAGCTGTGTTAATGAAGGGGAGAATATCTTGGGATCTGTTCCAGGGGTTGAAGTTGGTGATGAATTTCAGTTCAGAATAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATGTGAAACAAAAAGACAAGATCCTTGCAACTAGTATTGTTTCTTCGGGGGGCTATGCTGATGACTTAGATAACTCAGATGTTTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCAGTGATAAAGAGCCAGAAGATCAAAAGCTTGAAAGGGGAAATCTTGCTTTGAAGAACAGTAGTGAGGTAAAGAATTCTGTTAGAGTGATACGGGGCTATGAATCAATGGATGGTAAAAGAAAGATATATGTTTATGATGGACTTTATGTAGTTGAGTCATGTTGGCAGGATATAGGGCCACGTGGGAAGCTGGTTTATAAGTTTAGCTTGCGAAGAATCCCGGGTCAACCAGAGCTTGCCTTGAAGGAAGTGAAGAAATTGAAAAAGTTCAAAACAAGAGAAGGTCTATGTGTCGAAGATATTTCCTATGGGAAAGAGAAAATTCCGATATGTGCTGTGAACACCATAGATAACGAGAAACCCCCTACATTTAAATACATAACCGAGATGATATATCCTGAATGTTGCAATCTTATCCCTCCAAAAGGATGTAATTGTACTAATGGATGCTCTGACCATAAGAAATGTTGTTGCGTACTCAAAAATGGAGGGGAGATTCCATTTAATCATAATGGGGATATTGTAGAAGTAAAGCCTCTAGTCTATGAGTGTGGTCCTAAATGCAAGTGCCCTTCAACCTGCCATAATAGAGTTAGCCAACTTGGAATAAATATTCAACTCGAAATTTTTAAAACCAATTCAATGGGATGGGGTGTAAGATCCTTAAATTCCATCCCTTCAGGAAGTTTTATCTGTGAATATATTGGCGAGGTTCTTGAAGAAAAGGAAGCTGAACAAAGAACCGGTAATGATGAGTATCTTTTCGATATCGGAAATAACAAAAACAACAATAATCTTTGTGATGGACTTTCAACCCTTTTTCCAGATTCTGACTCAAGTTCAAGTGAAGTAGTGGAGGATTCTGACTTCACTATCGATGCCGCTCAGTTTGGTAATGTGGGGAGATTTGTTAACCATAGTTGCTCCCCTAATCTTTATGCTCAGAATGTCCTTTATGATCATCAAGACAGCAGGGTTCCTCACATCATGTTATTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTGACATACGATTACAATTACACGATAGATACAGTTCGTGATTCCGATGGCAATATCAAAAAGAAGTACTGCTTTTGTGGTTCTGTGGAATGTACTGGTAGGTTGTATTGA
Protein sequence

>Msa0627600

MEKGDSTIVASVSADGTSVEDKSGKDSGEADSPNEETYPQNFELNEDLLVTNTVEQTSDCTLKEDPMVLSDQVDGDSLANDEPAKVELVGMETMDTEFATEDCTLKKEYTVVSSHQFDVIILETFDVEFATESCSLKNEDDVPILETFNVEFATEGCSLKDENAVISSHQMDESTLANDEPAKLALAGVVTLDTEFATEGSVKQDLSYISKASYPAGEAAMSADSKSSLSNINIGGSGACMKEALTKRYAPRKKVAVFRDFPSLCGGNAPRLSQDECRKELSSLKKVAATDVKEAENNKRKFDNTVQDDSEGNTKLPEKHNHHHHEVNINSKEVVKAENMNTVKLESSSKVSSGRKVVQGLMAVVKEENMNTVKLESSSKVSSGRKVGLMSKSGRNEKERKGKKIDNVQLDRSKTATKSKGVLNHSGQQPLKKKRENCSSDDMGQLVTLEKSSQDPNENNKHFKSVPKSHSSSVNVFPLGRSNLSGHENDSVARNKVRKTLRLFHAFHRKILQEAEAKPKSNMKEVKRFDLQAAKKLKEEGSCVNEGENILGSVPGVEVGDEFQFRIELNIIGLHRQIQGGIDYVKQKDKILATSIVSSGGYADDLDNSDVLIYTGQGGNVMSSDKEPEDQKLERGNLALKNSSEVKNSVRVIRGYESMDGKRKIYVYDGLYVVESCWQDIGPRGKLVYKFSLRRIPGQPELALKEVKKLKKFKTREGLCVEDISYGKEKIPICAVNTIDNEKPPTFKYITEMIYPECCNLIPPKGCNCTNGCSDHKKCCCVLKNGGEIPFNHNGDIVEVKPLVYECGPKCKCPSTCHNRVSQLGINIQLEIFKTNSMGWGVRSLNSIPSGSFICEYIGEVLEEKEAEQRTGNDEYLFDIGNNKNNNNLCDGLSTLFPDSDSSSSEVVEDSDFTIDAAQFGNVGRFVNHSCSPNLYAQNVLYDHQDSRVPHIMLFAAENIPPLQELTYDYNYTIDTVRDSDGNIKKKYCFCGSVECTGRLY*