AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0629860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0629860 MtrunA17_Chr1g0193801 89.305 187 18 2 266 450 30 216 9.01e-113 339
Msa0629860 MtrunA17_Chr7g0270891 64.593 209 59 4 266 470 30 227 1.08e-83 264
Msa0629860 MtrunA17_Chr1g0193371 75.362 138 29 3 266 400 30 165 3.44e-64 213
Msa0629860 MtrunA17_Chr4g0058631 79.612 103 20 1 266 367 30 132 2.44e-54 187
Msa0629860 MtrunA17_Chr1g0211161 76.000 100 23 1 266 364 31 130 1.25e-50 173
Msa0629860 MtrunA17_Chr7g0271241 79.091 110 22 1 266 374 30 139 5.30e-50 176
Msa0629860 MtrunA17_Chr3g0117091 65.041 123 38 2 266 387 30 148 5.97e-50 175
Msa0629860 MtrunA17_Chr4g0055421 87.640 89 10 1 168 255 68 156 1.16e-45 159
Msa0629860 MtrunA17_Chr2g0309911 70.297 101 29 1 266 365 29 129 5.09e-45 160
Msa0629860 MtrunA17_Chr8g0342521 71.717 99 27 1 261 358 25 123 1.46e-44 160
Msa0629860 MtrunA17_Chr4g0037141 65.347 101 34 1 268 367 32 132 6.93e-44 157
Msa0629860 MtrunA17_Chr7g0217741 63.248 117 39 2 268 380 32 148 1.24e-43 157
Msa0629860 MtrunA17_Chr8g0342541 52.532 158 55 5 266 409 30 181 1.62e-43 157
Msa0629860 MtrunA17_Chr4g0042671 67.308 104 33 1 261 363 25 128 3.17e-43 158
Msa0629860 MtrunA17_Chr8g0349261 69.388 98 29 1 269 365 35 132 3.72e-43 155
Msa0629860 MtrunA17_Chr4g0039971 69.072 97 29 1 268 363 33 129 3.85e-43 156
Msa0629860 MtrunA17_Chr5g0395281 66.000 100 33 1 268 366 32 131 4.62e-43 155
Msa0629860 MtrunA17_Chr8g0385321 68.041 97 30 1 269 364 33 129 6.61e-43 155
Msa0629860 MtrunA17_Chr3g0115821 65.347 101 34 1 268 367 32 132 1.03e-42 155
Msa0629860 MtrunA17_Chr2g0325821 92.045 88 7 0 1 88 101 188 1.72e-42 162
Msa0629860 MtrunA17_Chr2g0323411 69.388 98 29 1 267 363 31 128 2.19e-42 154
Msa0629860 MtrunA17_Chr2g0330041 66.346 104 34 1 266 368 30 133 2.44e-42 155
Msa0629860 MtrunA17_Chr6g0453471 62.727 110 40 1 268 376 32 141 2.44e-42 154
Msa0629860 MtrunA17_Chr5g0435101 52.482 141 56 4 267 397 30 169 8.59e-42 149
Msa0629860 MtrunA17_Chr5g0434571 67.000 100 32 1 267 365 67 166 9.76e-42 153
Msa0629860 MtrunA17_Chr4g0032401 72.222 90 24 1 269 357 38 127 1.05e-41 152
Msa0629860 MtrunA17_Chr2g0281071 67.010 97 31 1 268 363 33 129 1.70e-41 152
Msa0629860 MtrunA17_Chr3g0131121 63.000 100 36 1 268 366 32 131 2.00e-41 150
Msa0629860 MtrunA17_Chr3g0110351 68.000 100 31 1 267 365 31 130 2.23e-41 150
Msa0629860 MtrunA17_Chr4g0048511 67.010 97 31 1 268 363 33 129 2.50e-41 152
Msa0629860 MtrunA17_Chr4g0041131 88.636 88 10 0 1 88 101 188 3.76e-41 158
Msa0629860 MtrunA17_Chr5g0410961 64.000 100 35 1 268 366 32 131 1.04e-40 150
Msa0629860 MtrunA17_Chr7g0228891 60.550 109 42 1 269 376 33 141 1.09e-40 147
Msa0629860 MtrunA17_Chr4g0057031 64.356 101 35 1 267 366 31 131 1.22e-40 147
Msa0629860 MtrunA17_Chr3g0103281 68.317 101 31 1 268 367 32 132 3.26e-40 148
Msa0629860 MtrunA17_Chr4g0044421 66.316 95 31 1 268 361 32 126 5.76e-40 143
Msa0629860 MtrunA17_Chr5g0417821 62.264 106 39 1 261 365 20 125 1.65e-39 145
Msa0629860 MtrunA17_Chr7g0274581 65.957 94 31 1 261 353 25 118 1.81e-39 142
Msa0629860 MtrunA17_Chr1g0203411 70.787 89 25 1 266 353 30 118 1.87e-39 145
Msa0629860 MtrunA17_Chr3g0088461 73.563 87 22 1 267 352 41 127 2.55e-39 146
Msa0629860 MtrunA17_Chr2g0328771 72.093 86 23 1 269 353 41 126 7.34e-39 144
Msa0629860 MtrunA17_Chr6g0452271 60.185 108 42 1 261 367 25 132 9.38e-39 144
Msa0629860 MtrunA17_Chr8g0342481 76.136 88 19 2 266 351 30 117 1.23e-38 145
Msa0629860 MtrunA17_Chr7g0261281 48.366 153 57 3 267 418 31 162 1.60e-38 142
Msa0629860 MtrunA17_Chr8g0387421 67.416 89 28 1 266 353 30 118 1.74e-38 143
Msa0629860 MtrunA17_Chr7g0247131 66.292 89 29 1 280 367 10 98 4.80e-38 140
Msa0629860 MtrunA17_Chr1g0187761 68.966 87 26 1 268 353 32 118 5.50e-38 140
Msa0629860 MtrunA17_Chr1g0203441 67.708 96 29 2 268 362 33 127 1.38e-37 139
Msa0629860 MtrunA17_Chr8g0360571 86.364 88 11 1 1 88 101 187 1.69e-37 147
Msa0629860 MtrunA17_Chr3g0121241 62.887 97 35 1 269 364 63 159 1.36e-36 137
Msa0629860 MtrunA17_Chr5g0397231 71.605 81 22 1 266 345 30 110 1.67e-36 138
Msa0629860 MtrunA17_Chr6g0470971 66.316 95 30 2 268 360 34 128 2.63e-36 136
Msa0629860 MtrunA17_Chr1g0167691 67.059 85 27 1 268 351 32 116 1.87e-35 133
Msa0629860 MtrunA17_Chr1g0167661 68.235 85 26 1 268 351 32 116 3.24e-35 132
Msa0629860 MtrunA17_Chr4g0022931 50.000 124 61 1 261 383 26 149 9.46e-35 131
Msa0629860 MtrunA17_Chr2g0323351 61.957 92 34 1 261 351 25 116 6.38e-34 129
Msa0629860 MtrunA17_Chr4g0070641 62.791 86 31 1 268 352 32 117 8.81e-34 125
Msa0629860 MtrunA17_Chr2g0315891 78.409 88 18 1 1 88 100 186 9.76e-34 136
Msa0629860 MtrunA17_Chr2g0311221 63.636 88 31 1 259 345 25 112 1.08e-33 130
Msa0629860 MtrunA17_Chr4g0022901 63.736 91 32 1 261 350 26 116 2.04e-33 128
Msa0629860 MtrunA17_Chr8g0346561 63.218 87 31 1 268 353 32 118 2.95e-33 128
Msa0629860 MtrunA17_Chr7g0275911 60.227 88 34 1 268 354 32 119 3.28e-33 127
Msa0629860 MtrunA17_Chr4g0070611 62.791 86 31 1 268 352 32 117 4.64e-33 128
Msa0629860 MtrunA17_Chr1g0151941 46.715 137 65 5 267 401 31 161 5.69e-32 123
Msa0629860 MtrunA17_Chr4g0022911 59.341 91 36 1 261 350 26 116 6.14e-32 124
Msa0629860 MtrunA17_Chr4g0068061 67.059 85 27 1 268 351 32 116 6.53e-32 125
Msa0629860 MtrunA17_Chr3g0099131 62.921 89 32 1 266 353 59 147 2.42e-31 127
Msa0629860 MtrunA17_Chr8g0342531 83.333 60 10 0 266 325 30 89 2.45e-31 119
Msa0629860 MtrunA17_Chr1g0194951 66.667 84 27 1 269 351 33 116 4.47e-31 124
Msa0629860 MtrunA17_Chr1g0154031 60.215 93 36 1 261 352 89 181 1.01e-30 124
Msa0629860 MtrunA17_Chr7g0228231 56.250 96 38 2 259 353 28 120 1.45e-30 118
Msa0629860 MtrunA17_Chr4g0022891 42.953 149 74 3 268 405 32 180 1.95e-30 119
Msa0629860 MtrunA17_Chr1g0187121 89.394 66 7 0 449 514 168 233 2.27e-30 122
Msa0629860 MtrunA17_Chr8g0354661 64.706 85 29 1 269 352 58 142 2.59e-30 124
Msa0629860 MtrunA17_Chr6g0450101 56.250 96 38 2 259 353 28 120 4.94e-30 116
Msa0629860 MtrunA17_Chr4g0022881 57.778 90 37 1 261 349 25 114 6.14e-30 117
Msa0629860 MtrunA17_Chr8g0342511 82.759 58 10 0 266 323 30 87 9.38e-30 112
Msa0629860 MtrunA17_Chr8g0343831 57.955 88 36 1 268 354 28 115 1.25e-29 117
Msa0629860 MtrunA17_Chr4g0055981 61.905 84 31 1 268 350 75 158 1.45e-29 116
Msa0629860 MtrunA17_Chr7g0240821 62.353 85 31 1 268 351 21 105 2.84e-29 115
Msa0629860 MtrunA17_Chr1g0152011 62.353 85 31 1 271 354 36 120 3.59e-29 117
Msa0629860 MtrunA17_Chr1g0186061 63.095 84 30 1 268 350 40 123 4.86e-29 115
Msa0629860 MtrunA17_Chr4g0028311 63.415 82 29 1 271 351 36 117 5.00e-29 117
Msa0629860 MtrunA17_Chr3g0080861 58.140 86 35 1 268 352 57 142 5.50e-29 120
Msa0629860 MtrunA17_Chr5g0400821 60.000 85 33 1 271 354 36 120 1.85e-28 115
Msa0629860 MtrunA17_Chr3g0135311 59.756 82 32 1 271 351 36 117 2.85e-28 115
Msa0629860 MtrunA17_Chr7g0217221 56.322 87 37 1 268 353 32 118 2.92e-28 113
Msa0629860 MtrunA17_Chr1g0168661 60.465 86 33 1 268 352 41 126 3.45e-28 113
Msa0629860 MtrunA17_Chr3g0092401 57.471 87 36 1 268 353 33 119 4.29e-28 114
Msa0629860 MtrunA17_Chr1g0209661 54.945 91 40 1 268 357 47 137 6.41e-28 113
Msa0629860 MtrunA17_Chr4g0060721 54.167 96 43 1 259 353 24 119 8.96e-28 114
Msa0629860 MtrunA17_Chr7g0269831 57.009 107 44 2 269 373 33 139 1.16e-27 114
Msa0629860 MtrunA17_Chr7g0254411 51.456 103 47 2 259 358 23 125 1.62e-27 113
Msa0629860 MtrunA17_Chr4g0054391 65.333 75 25 1 271 344 36 110 1.99e-27 112
Msa0629860 MtrunA17_Chr2g0327351 64.474 76 26 1 271 345 36 111 2.15e-27 112
Msa0629860 MtrunA17_Chr1g0151621 53.191 94 43 1 168 260 107 200 2.85e-27 110
Msa0629860 MtrunA17_Chr5g0434831 57.647 85 35 1 268 351 27 111 2.85e-27 108
Msa0629860 MtrunA17_Chr2g0322521 62.791 86 31 1 268 352 49 134 3.08e-27 113
Msa0629860 MtrunA17_Chr8g0342461 78.689 61 12 1 266 325 30 90 3.38e-27 106
Msa0629860 MtrunA17_Chr3g0093811 42.384 151 82 2 280 425 14 164 4.91e-27 110
Msa0629860 MtrunA17_Chr1g0180391 52.174 115 47 3 266 378 37 145 5.78e-27 108
Msa0629860 MtrunA17_Chr5g0434931 55.294 85 37 1 268 351 55 139 7.63e-27 110
Msa0629860 MtrunA17_Chr3g0102821 57.303 89 37 1 168 255 83 171 1.11e-26 107
Msa0629860 MtrunA17_Chr8g0342471 77.049 61 13 1 266 325 30 90 1.12e-26 105
Msa0629860 MtrunA17_Chr1g0194301 50.000 106 49 2 253 357 41 143 1.49e-26 108
Msa0629860 MtrunA17_Chr4g0076551 55.056 89 39 1 168 255 84 172 1.68e-26 107
Msa0629860 MtrunA17_Chr5g0434911 56.471 85 36 1 268 351 41 125 1.74e-26 108
Msa0629860 MtrunA17_Chr8g0360111 57.831 83 34 1 266 347 43 125 1.77e-26 108
Msa0629860 MtrunA17_Chr6g0453211 59.494 79 31 1 268 345 32 110 1.88e-26 109
Msa0629860 MtrunA17_Chr1g0194291 53.933 89 40 1 266 353 39 127 3.14e-26 107
Msa0629860 MtrunA17_Chr6g0487491 57.303 89 29 2 271 350 36 124 3.56e-26 107
Msa0629860 MtrunA17_Chr1g0192411 56.977 86 36 1 268 352 32 117 4.60e-26 110
Msa0629860 MtrunA17_Chr4g0072751 60.526 76 29 1 271 345 36 111 4.65e-26 109
Msa0629860 MtrunA17_Chr5g0446931 56.180 89 38 1 168 255 83 171 6.63e-26 105
Msa0629860 MtrunA17_Chr7g0264641 57.317 82 34 1 271 351 36 117 1.04e-25 106
Msa0629860 MtrunA17_Chr7g0220341 54.444 90 38 2 268 354 45 134 3.49e-25 105
Msa0629860 MtrunA17_Chr5g0434841 54.118 85 38 1 268 351 40 124 4.87e-25 105
Msa0629860 MtrunA17_Chr4g0042611 62.500 64 24 0 261 324 25 88 5.83e-25 98.6
Msa0629860 MtrunA17_Chr7g0228991 54.118 85 38 1 268 351 49 133 1.63e-24 103
Msa0629860 MtrunA17_Chr5g0440781 42.609 115 63 3 268 380 32 145 3.80e-24 99.8
Msa0629860 MtrunA17_Chr8g0346911 47.423 97 50 1 169 264 92 188 3.89e-24 100
Msa0629860 MtrunA17_Chr3g0099141 63.077 65 24 0 266 330 58 122 5.37e-24 97.8
Msa0629860 MtrunA17_Chr4g0068921 49.533 107 50 2 252 357 31 134 5.61e-24 99.4
Msa0629860 MtrunA17_Chr5g0440761 42.609 115 63 3 268 380 32 145 6.43e-24 101
Msa0629860 MtrunA17_Chr2g0327821 51.136 88 42 1 268 354 26 113 6.57e-24 100
Msa0629860 MtrunA17_Chr4g0063121 40.816 147 87 0 173 319 31 177 8.80e-24 99.4
Msa0629860 MtrunA17_Chr2g0293911 49.533 107 50 2 252 357 31 134 9.32e-24 102
Msa0629860 MtrunA17_Chr5g0441141 42.609 115 63 3 268 380 32 145 1.02e-23 100
Msa0629860 MtrunA17_Chr4g0030881 49.474 95 40 2 268 354 27 121 1.44e-23 100
Msa0629860 MtrunA17_Chr8g0388331 43.158 95 54 0 170 264 71 165 7.18e-23 96.7
Msa0629860 MtrunA17_Chr2g0323321 58.824 68 28 0 261 328 24 91 8.51e-23 93.6
Msa0629860 MtrunA17_Chr8g0341941 48.864 88 44 1 169 255 114 201 2.23e-22 96.7
Msa0629860 MtrunA17_Chr2g0294811 71.429 56 16 0 269 324 33 88 4.01e-22 91.7
Msa0629860 MtrunA17_Chr8g0334881 52.874 87 39 2 268 352 30 116 1.11e-21 95.9
Msa0629860 MtrunA17_Chr4g0013361 46.281 121 58 5 268 384 30 147 1.64e-21 95.1
Msa0629860 MtrunA17_Chr5g0395221 64.912 57 20 0 268 324 32 88 2.50e-21 88.6
Msa0629860 MtrunA17_Chr2g0290761 45.783 83 45 0 173 255 92 174 2.80e-21 92.4
Msa0629860 MtrunA17_Chr5g0441131 46.237 93 47 3 268 358 29 120 6.24e-21 90.5
Msa0629860 MtrunA17_Chr7g0229101 57.143 70 29 1 280 348 4 73 2.52e-20 89.4
Msa0629860 MtrunA17_Chr5g0434901 57.353 68 28 1 282 348 7 74 3.30e-20 86.3
Msa0629860 MtrunA17_Chr2g0290771 46.988 83 44 0 173 255 54 136 3.88e-20 88.6
Msa0629860 MtrunA17_Chr2g0290751 44.578 83 46 0 173 255 92 174 4.64e-20 88.6
Msa0629860 MtrunA17_Chr7g0229131 53.425 73 33 1 280 351 4 76 1.26e-19 86.3
Msa0629860 MtrunA17_Chr4g0008551 41.007 139 72 5 266 400 54 186 1.62e-19 90.1
Msa0629860 MtrunA17_Chr2g0290781 44.578 83 46 0 173 255 94 176 2.56e-18 84.3
Msa0629860 MtrunA17_Chr6g0453751 60.000 60 23 1 273 331 53 112 8.98e-18 79.7
Msa0629860 MtrunA17_Chr5g0429661 44.048 84 45 2 268 350 140 222 2.07e-17 84.0
Msa0629860 MtrunA17_Chr4g0053431 50.000 84 40 2 268 350 23 105 2.44e-17 82.4
Msa0629860 MtrunA17_Chr1g0177901 40.000 110 55 4 269 369 13 120 6.39e-17 79.7
Msa0629860 MtrunA17_Chr7g0238631 48.235 85 42 2 268 351 131 214 9.80e-17 83.2
Msa0629860 MtrunA17_Chr5g0401731 43.878 98 53 2 268 364 33 129 1.00e-16 81.3
Msa0629860 MtrunA17_Chr3g0117511 33.117 154 89 6 270 416 201 347 1.09e-16 82.4
Msa0629860 MtrunA17_Chr3g0133601 55.882 68 29 1 284 350 70 137 1.26e-16 79.3
Msa0629860 MtrunA17_Chr7g0228401 40.860 93 53 2 255 346 284 375 1.34e-16 82.4
Msa0629860 MtrunA17_Chr3g0139671 44.706 85 45 2 268 351 103 186 6.87e-16 80.9
Msa0629860 MtrunA17_Chr6g0460661 36.893 103 59 3 261 362 30 127 7.16e-16 75.5
Msa0629860 MtrunA17_Chr6g0480581 40.449 89 51 2 267 354 21 108 7.39e-16 77.4
Msa0629860 MtrunA17_Chr5g0425591 50.769 65 29 2 270 331 29 93 8.17e-16 73.2
Msa0629860 MtrunA17_Chr6g0454921 48.052 77 39 1 284 359 48 124 9.61e-16 76.3
Msa0629860 MtrunA17_Chr4g0058991 40.449 89 49 3 268 354 227 313 2.33e-15 78.6
Msa0629860 MtrunA17_Chr4g0042501 40.909 88 50 2 268 354 123 209 3.78e-15 77.4
Msa0629860 MtrunA17_Chr5g0417621 39.773 88 51 2 268 354 152 238 5.19e-15 77.4
Msa0629860 MtrunA17_Chr1g0157731 43.529 85 46 2 268 351 109 192 5.88e-15 78.2
Msa0629860 MtrunA17_Chr5g0437321 53.846 65 29 1 284 347 52 116 6.28e-15 75.5
Msa0629860 MtrunA17_Chr7g0238651 37.624 101 54 3 268 359 25 125 1.50e-14 75.1
Msa0629860 MtrunA17_Chr6g0460671 45.205 73 39 1 268 340 117 188 2.93e-14 74.3
Msa0629860 MtrunA17_Chr7g0228531 39.773 88 50 3 268 354 238 323 9.67e-14 73.2
Msa0629860 MtrunA17_Chr2g0299161 91.429 35 3 0 134 168 442 476 3.50e-13 72.4
Msa0629860 MtrunA17_Chr7g0254261 42.045 88 49 2 268 354 107 193 5.12e-13 70.5
Msa0629860 MtrunA17_Chr3g0125801 42.697 89 47 3 268 354 34 120 6.27e-13 69.3
Msa0629860 MtrunA17_Chr7g0233061 40.278 72 41 2 284 354 211 281 6.32e-13 70.1
Msa0629860 MtrunA17_Chr3g0126811 64.583 48 16 1 168 214 69 116 1.19e-12 64.7
Msa0629860 MtrunA17_Chr5g0397841 43.590 78 42 2 268 344 128 204 1.27e-12 70.1
Msa0629860 MtrunA17_Chr5g0395231 57.692 52 21 1 313 363 4 55 4.92e-12 66.2
Msa0629860 MtrunA17_Chr7g0228481 38.776 98 52 5 262 355 234 327 7.87e-12 67.4
Msa0629860 MtrunA17_Chr5g0399921 40.404 99 44 3 124 209 13 109 1.20e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0629860 AT4G01680.3 78.049 123 25 2 266 387 30 151 2.28e-62 204
Msa0629860 AT4G01680.1 78.049 123 25 2 266 387 30 151 4.95e-61 204
Msa0629860 AT1G57560.1 78.448 116 22 2 266 378 30 145 1.24e-58 197
Msa0629860 AT1G57560.2 83.654 104 16 1 266 368 30 133 9.15e-58 193
Msa0629860 AT4G01680.2 71.111 135 25 3 266 387 30 163 9.60e-58 196
Msa0629860 AT1G09540.1 83.654 104 16 1 266 368 30 133 1.60e-56 193
Msa0629860 AT5G26660.1 83.000 100 16 1 266 364 30 129 5.57e-55 189
Msa0629860 AT5G26660.2 82.759 87 14 1 279 364 12 98 6.06e-46 164
Msa0629860 AT3G12720.1 70.103 97 28 1 266 361 40 136 2.08e-45 162
Msa0629860 AT5G16600.1 48.148 162 73 3 267 422 31 187 9.47e-45 160
Msa0629860 AT4G34990.1 58.120 117 47 2 268 383 32 147 4.26e-44 157
Msa0629860 AT5G16770.4 66.000 100 33 1 268 366 32 131 4.78e-44 159
Msa0629860 AT5G16770.3 66.000 100 33 1 268 366 32 131 4.78e-44 159
Msa0629860 AT1G66230.1 64.035 114 40 1 267 379 31 144 6.48e-44 157
Msa0629860 AT5G16770.1 66.000 100 33 1 268 366 32 131 9.60e-44 158
Msa0629860 AT5G16770.2 66.000 100 33 1 268 366 32 131 9.60e-44 158
Msa0629860 AT3G61250.1 65.714 105 35 1 261 364 25 129 1.62e-43 156
Msa0629860 AT3G02940.2 65.000 100 34 1 268 366 32 131 3.07e-43 156
Msa0629860 AT4G38620.1 52.555 137 53 3 261 393 25 153 3.27e-43 155
Msa0629860 AT5G15310.4 67.327 101 32 1 268 367 32 132 7.31e-43 153
Msa0629860 AT3G02940.1 65.000 100 34 1 268 366 32 131 7.38e-43 155
Msa0629860 AT3G02940.3 65.000 100 34 1 268 366 32 131 7.38e-43 155
Msa0629860 AT1G74430.1 65.657 99 33 1 268 365 32 130 8.09e-43 154
Msa0629860 AT5G15310.2 67.327 101 32 1 268 367 32 132 1.33e-42 154
Msa0629860 AT5G15310.1 67.327 101 32 1 268 367 32 132 1.36e-42 155
Msa0629860 AT5G65230.1 67.000 100 32 1 268 366 32 131 1.55e-42 154
Msa0629860 AT4G09460.1 52.143 140 66 1 268 406 32 171 1.91e-42 151
Msa0629860 AT3G13890.2 76.744 86 19 1 267 351 31 116 3.78e-42 154
Msa0629860 AT2G16720.1 62.136 103 38 1 267 368 31 133 4.03e-42 152
Msa0629860 AT5G10280.1 64.356 101 35 1 268 367 32 132 4.10e-42 154
Msa0629860 AT4G05100.1 67.010 97 31 1 268 363 33 129 4.72e-42 153
Msa0629860 AT5G60890.1 60.748 107 41 1 268 373 32 138 5.24e-42 152
Msa0629860 AT4G22680.1 62.857 105 38 1 267 370 31 135 6.97e-42 151
Msa0629860 AT4G21440.1 67.010 97 31 1 268 363 32 128 1.25e-41 153
Msa0629860 AT4G28110.1 67.010 97 31 1 268 363 32 128 1.52e-41 150
Msa0629860 AT4G12350.1 65.686 102 34 1 267 367 31 132 1.63e-41 150
Msa0629860 AT5G14340.1 43.889 180 92 4 269 446 45 217 1.65e-41 150
Msa0629860 AT3G01140.2 67.327 101 32 1 268 367 32 132 1.80e-41 152
Msa0629860 AT3G01140.1 67.327 101 32 1 268 367 75 175 4.59e-41 152
Msa0629860 AT4G17785.2 62.500 112 35 2 253 363 24 129 8.47e-41 150
Msa0629860 AT1G22640.1 62.000 100 37 1 268 366 32 131 9.07e-41 147
Msa0629860 AT4G17785.1 62.500 112 35 2 253 363 24 129 1.04e-40 150
Msa0629860 AT5G07700.1 50.658 152 59 3 268 403 32 183 1.08e-40 150
Msa0629860 AT5G07700.2 50.658 152 59 3 268 403 32 183 1.08e-40 150
Msa0629860 AT5G56110.1 70.833 96 27 1 273 367 37 132 1.96e-40 149
Msa0629860 AT1G34670.1 64.356 101 35 1 268 367 32 132 4.07e-40 149
Msa0629860 AT5G12870.1 74.419 86 21 1 269 353 39 124 4.71e-40 146
Msa0629860 AT5G61420.2 63.107 103 37 1 268 369 32 134 6.76e-40 148
Msa0629860 AT1G18710.1 63.265 98 33 2 270 364 32 129 9.97e-40 145
Msa0629860 AT1G63910.1 64.646 99 34 1 266 363 30 128 1.07e-39 148
Msa0629860 AT5G54230.1 62.500 104 38 1 261 363 25 128 1.73e-39 146
Msa0629860 AT1G18570.1 63.636 99 35 1 268 365 33 131 1.76e-39 147
Msa0629860 AT5G07690.1 62.617 107 39 1 268 373 32 138 3.26e-39 145
Msa0629860 AT3G13890.1 69.474 95 19 2 267 351 31 125 3.28e-39 147
Msa0629860 AT1G74080.1 63.265 98 35 1 268 364 32 129 4.65e-38 142
Msa0629860 AT1G35515.1 62.000 100 37 1 268 366 32 131 5.40e-38 139
Msa0629860 AT3G08500.1 72.414 87 23 1 267 352 49 135 5.68e-38 142
Msa0629860 AT5G62320.1 61.165 103 39 1 272 373 44 146 6.17e-38 140
Msa0629860 AT3G13540.1 44.785 163 72 2 269 413 44 206 7.37e-38 139
Msa0629860 AT3G23250.1 48.000 150 65 4 268 416 32 169 3.38e-37 139
Msa0629860 AT5G47100.2 75.000 88 21 1 168 254 68 155 6.30e-37 134
Msa0629860 AT3G14940.1 80.682 88 17 0 1 88 101 188 1.83e-36 144
Msa0629860 AT3G14940.2 80.682 88 17 0 1 88 101 188 1.83e-36 144
Msa0629860 AT5G47100.1 54.962 131 37 2 168 297 68 177 2.24e-36 134
Msa0629860 AT4G17615.2 73.034 89 23 1 168 255 26 114 2.62e-36 133
Msa0629860 AT4G17615.4 73.034 89 23 1 168 255 68 156 2.78e-36 134
Msa0629860 AT4G17615.1 73.034 89 23 1 168 255 68 156 2.78e-36 134
Msa0629860 AT4G17615.5 73.034 89 23 1 168 255 68 156 2.78e-36 134
Msa0629860 AT2G31180.1 45.860 157 79 3 268 420 32 186 2.97e-36 135
Msa0629860 AT4G17615.3 73.034 89 23 1 168 255 68 156 3.14e-36 135
Msa0629860 AT3G28470.1 61.111 108 41 1 261 367 25 132 4.27e-36 137
Msa0629860 AT1G53310.2 79.545 88 18 0 1 88 101 188 5.16e-36 143
Msa0629860 AT1G53310.1 79.545 88 18 0 1 88 101 188 5.16e-36 143
Msa0629860 AT1G53310.3 79.545 88 18 0 1 88 101 188 5.16e-36 143
Msa0629860 AT1G16490.1 59.130 115 42 3 269 378 35 149 5.35e-36 135
Msa0629860 AT1G79180.1 63.542 96 34 1 259 353 25 120 5.65e-36 135
Msa0629860 AT1G06180.1 66.667 87 28 1 268 353 32 118 8.63e-35 131
Msa0629860 AT5G35550.1 45.810 179 79 5 266 439 32 197 2.06e-34 130
Msa0629860 AT1G56160.1 68.235 85 26 1 268 351 34 118 7.73e-34 130
Msa0629860 AT3G48920.1 66.265 83 27 1 268 349 38 120 1.06e-33 129
Msa0629860 AT2G42600.2 80.682 88 16 1 1 88 101 187 2.10e-33 135
Msa0629860 AT2G42600.1 80.682 88 16 1 1 88 101 187 2.10e-33 135
Msa0629860 AT2G42600.3 80.682 88 16 1 1 88 101 187 2.10e-33 135
Msa0629860 AT3G12820.1 67.857 84 26 1 269 351 35 118 2.35e-33 127
Msa0629860 AT4G25560.1 67.059 85 27 1 267 350 29 113 3.00e-32 125
Msa0629860 AT5G52260.1 71.084 83 23 1 269 350 33 115 5.60e-32 124
Msa0629860 AT3G62610.1 66.667 84 27 1 269 351 33 116 1.69e-31 125
Msa0629860 AT2G47460.1 66.279 86 28 1 269 353 33 118 2.73e-31 125
Msa0629860 AT5G49330.1 66.279 86 28 1 267 351 31 116 4.11e-31 124
Msa0629860 AT5G55020.1 62.791 86 31 1 269 353 47 132 1.05e-30 125
Msa0629860 AT3G27810.1 54.545 99 41 2 259 356 34 129 1.07e-30 119
Msa0629860 AT5G06100.1 63.953 86 30 1 268 352 52 137 1.28e-30 124
Msa0629860 AT5G40350.1 55.102 98 40 2 259 355 31 125 1.66e-30 118
Msa0629860 AT5G14750.1 57.647 85 35 1 268 351 36 120 1.72e-30 118
Msa0629860 AT5G52600.1 44.697 132 57 3 267 382 31 162 1.86e-30 118
Msa0629860 AT3G01530.1 52.083 96 45 1 268 362 45 140 1.95e-30 118
Msa0629860 AT2G26960.1 54.639 97 42 2 261 356 33 128 2.27e-30 123
Msa0629860 AT5G40330.1 56.977 86 36 1 267 351 31 116 2.91e-30 118
Msa0629860 AT4G26930.1 50.427 117 53 4 268 383 39 151 3.19e-30 122
Msa0629860 AT3G11440.2 61.628 86 32 1 268 352 61 146 3.34e-30 123
Msa0629860 AT5G06100.5 63.953 86 30 1 268 352 52 137 3.61e-30 124
Msa0629860 AT5G06100.2 63.953 86 30 1 268 352 52 137 3.61e-30 124
Msa0629860 AT5G06100.3 63.953 86 30 1 268 352 52 137 3.61e-30 124
Msa0629860 AT5G06100.4 63.953 86 30 1 268 352 52 137 3.61e-30 124
Msa0629860 AT1G79180.2 46.512 129 35 2 259 353 25 153 7.43e-30 120
Msa0629860 AT3G11440.3 61.628 86 32 1 268 352 61 146 9.70e-30 123
Msa0629860 AT3G11440.4 61.628 86 32 1 268 352 61 146 9.70e-30 123
Msa0629860 AT3G11440.1 61.628 86 32 1 268 352 61 146 9.70e-30 123
Msa0629860 AT3G49690.1 62.353 85 31 1 271 354 36 120 9.99e-30 119
Msa0629860 AT2G32460.2 59.302 86 34 1 268 352 26 111 1.05e-29 122
Msa0629860 AT2G32460.1 59.302 86 34 1 268 352 38 123 1.05e-29 122
Msa0629860 AT5G62470.2 48.387 124 56 2 259 381 23 139 1.83e-29 119
Msa0629860 AT5G65790.1 61.176 85 32 1 271 354 36 120 2.78e-29 119
Msa0629860 AT3G47600.1 58.621 87 35 1 268 353 32 118 6.39e-29 117
Msa0629860 AT3G27920.1 52.128 94 43 2 260 351 25 118 9.65e-29 114
Msa0629860 AT1G74650.1 57.447 94 39 1 259 351 23 116 9.67e-29 117
Msa0629860 AT5G57620.1 58.511 94 35 3 268 357 32 125 1.22e-28 116
Msa0629860 AT4G13480.1 62.069 87 32 1 267 352 25 111 2.14e-28 114
Msa0629860 AT5G23000.1 61.628 86 31 2 268 351 32 117 3.13e-28 115
Msa0629860 AT3G24310.1 61.628 86 32 1 268 352 38 123 5.89e-28 113
Msa0629860 AT1G08810.1 56.044 91 39 1 268 357 32 122 5.95e-28 113
Msa0629860 AT5G62470.1 48.387 124 55 3 259 381 23 138 8.55e-28 114
Msa0629860 AT1G25340.1 44.275 131 58 4 269 386 39 167 8.84e-28 113
Msa0629860 AT4G37780.1 41.667 168 84 6 273 439 38 192 9.49e-28 113
Msa0629860 AT3G28910.1 57.143 91 38 1 268 357 32 122 9.76e-28 114
Msa0629860 AT3G30210.1 61.176 85 32 1 266 349 45 129 1.27e-27 112
Msa0629860 AT3G12820.2 69.565 69 20 1 284 351 2 70 1.42e-27 109
Msa0629860 AT2G36890.1 55.435 92 40 1 271 361 36 127 1.52e-27 112
Msa0629860 AT2G36890.2 55.435 92 40 1 271 361 77 168 2.13e-27 113
Msa0629860 AT5G35550.2 44.512 164 73 5 281 439 50 200 3.37e-27 110
Msa0629860 AT2G26950.1 53.933 89 37 2 268 355 36 121 9.49e-27 112
Msa0629860 AT1G68320.1 53.684 95 43 1 269 362 40 134 1.27e-26 109
Msa0629860 AT5G24270.3 50.980 102 45 2 169 269 26 123 2.07e-26 105
Msa0629860 AT5G24270.5 50.980 102 45 2 169 269 48 145 2.28e-26 106
Msa0629860 AT1G48000.1 53.261 92 42 1 259 349 43 134 2.50e-26 107
Msa0629860 AT5G24270.4 50.980 102 45 2 169 269 73 170 2.53e-26 107
Msa0629860 AT5G24270.1 50.980 102 45 2 169 269 73 170 2.53e-26 107
Msa0629860 AT5G24270.2 50.980 102 45 2 169 269 73 170 2.53e-26 107
Msa0629860 AT4G26570.2 57.831 83 35 0 173 255 93 175 2.92e-26 107
Msa0629860 AT3G27810.2 58.442 77 31 1 281 356 4 80 9.92e-26 104
Msa0629860 AT4G26570.1 55.056 89 39 1 168 255 83 171 1.22e-25 105
Msa0629860 AT5G59780.3 54.545 88 39 1 268 354 28 115 1.35e-25 105
Msa0629860 AT3G46130.1 53.409 88 40 1 268 354 29 116 3.43e-25 105
Msa0629860 AT4G16350.2 47.368 114 57 2 143 255 54 165 3.61e-25 103
Msa0629860 AT4G16350.1 47.368 114 57 2 143 255 54 165 3.61e-25 103
Msa0629860 AT5G14750.3 62.319 69 25 1 284 351 18 86 3.82e-25 102
Msa0629860 AT1G66380.1 58.333 84 34 1 268 350 28 111 3.98e-25 101
Msa0629860 AT1G66370.1 54.762 84 37 1 268 350 28 111 4.95e-25 104
Msa0629860 AT5G40350.2 49.038 104 49 2 281 380 5 108 5.89e-25 101
Msa0629860 AT3G53200.1 57.831 83 34 1 269 350 30 112 1.29e-24 102
Msa0629860 AT2G47190.1 49.438 89 44 1 266 353 38 126 1.70e-24 103
Msa0629860 AT5G55990.1 55.056 89 39 1 168 255 83 171 3.23e-24 101
Msa0629860 AT5G55990.2 55.056 89 39 1 168 255 83 171 3.23e-24 101
Msa0629860 AT4G33000.4 50.000 88 43 1 168 254 104 191 3.33e-24 100
Msa0629860 AT4G33000.6 50.000 88 43 1 168 254 104 191 3.33e-24 100
Msa0629860 AT3G47600.2 60.811 74 28 1 281 353 39 112 3.50e-24 103
Msa0629860 AT1G56650.1 48.571 105 45 2 268 363 28 132 3.63e-24 102
Msa0629860 AT4G33000.5 50.000 88 43 1 168 254 104 191 4.80e-24 100
Msa0629860 AT3G46130.3 57.895 76 31 1 280 354 9 84 6.15e-24 100
Msa0629860 AT3G53200.2 63.380 71 25 1 281 350 9 79 1.01e-23 99.4
Msa0629860 AT3G46130.4 58.667 75 30 1 281 354 20 94 1.18e-23 100
Msa0629860 AT5G59780.2 58.667 75 30 1 281 354 20 94 1.37e-23 99.4
Msa0629860 AT4G33000.2 49.438 89 44 1 168 255 104 192 1.51e-23 100
Msa0629860 AT1G22640.3 56.757 74 31 1 294 366 1 74 1.52e-23 98.6
Msa0629860 AT3G06490.1 54.000 100 42 2 259 357 33 129 1.56e-23 101
Msa0629860 AT4G33000.1 49.438 89 44 1 168 255 114 202 1.77e-23 100
Msa0629860 AT1G25340.2 41.985 131 56 5 269 386 39 162 2.43e-23 100
Msa0629860 AT1G25340.3 41.221 131 57 4 269 386 39 162 2.77e-23 100
Msa0629860 AT1G18960.1 46.939 98 47 3 271 367 32 125 5.27e-23 100
Msa0629860 AT1G66390.1 57.143 84 35 1 268 350 28 111 1.75e-22 97.1
Msa0629860 AT1G71030.1 52.381 84 38 2 280 362 13 95 4.13e-22 94.7
Msa0629860 AT1G71030.2 54.545 77 34 1 287 362 5 81 4.13e-22 94.0
Msa0629860 AT5G49620.1 52.000 100 44 2 259 357 40 136 5.16e-22 97.1
Msa0629860 AT3G60460.1 52.874 87 39 2 268 352 31 117 6.24e-22 96.7
Msa0629860 AT3G23250.2 38.554 166 72 7 294 441 1 154 2.58e-21 93.2
Msa0629860 AT4G26560.1 46.988 83 44 0 173 255 77 159 1.29e-20 90.9
Msa0629860 AT1G66380.3 59.155 71 28 1 281 350 8 78 2.85e-20 86.7
Msa0629860 AT4G01420.2 46.988 83 44 0 173 255 73 155 4.42e-19 85.9
Msa0629860 AT4G01420.1 46.988 83 44 0 173 255 73 155 8.71e-19 85.1
Msa0629860 AT5G49620.2 45.614 114 44 3 259 357 40 150 9.57e-19 87.8
Msa0629860 AT1G64480.4 40.816 98 57 1 168 264 72 169 3.08e-18 83.6
Msa0629860 AT1G64480.2 40.816 98 57 1 168 264 72 169 6.94e-18 82.8
Msa0629860 AT1G64480.3 40.816 98 57 1 168 264 72 169 6.94e-18 82.8
Msa0629860 AT1G64480.1 40.816 98 57 1 168 264 72 169 6.94e-18 82.8
Msa0629860 AT2G39880.1 61.765 68 25 1 284 350 83 150 1.64e-17 84.7
Msa0629860 AT4G18770.1 43.182 88 48 2 268 354 235 321 2.10e-17 85.1
Msa0629860 AT2G25230.1 41.053 95 52 3 273 364 49 142 2.85e-17 81.6
Msa0629860 AT3G09230.1 53.623 69 31 1 284 351 88 156 5.13e-17 83.6
Msa0629860 AT5G14750.4 55.932 59 25 1 294 351 1 59 1.42e-16 77.0
Msa0629860 AT5G14750.2 55.932 59 25 1 294 351 1 59 1.42e-16 77.0
Msa0629860 AT5G02320.3 45.882 85 44 2 268 351 85 168 2.78e-16 82.0
Msa0629860 AT5G02320.1 45.882 85 44 2 268 351 145 228 3.26e-16 82.0
Msa0629860 AT5G02320.2 45.882 85 44 2 268 351 145 228 3.26e-16 82.0
Msa0629860 AT3G55730.1 57.353 68 28 1 284 350 89 156 3.73e-16 80.9
Msa0629860 AT1G66380.2 50.000 78 37 1 268 345 28 103 4.99e-16 74.7
Msa0629860 AT3G27785.1 42.268 97 50 4 268 360 207 301 5.24e-16 80.9
Msa0629860 AT3G23090.5 41.667 108 60 1 410 514 105 212 6.50e-16 79.7
Msa0629860 AT3G23090.1 41.667 108 60 1 410 514 104 211 6.56e-16 79.3
Msa0629860 AT3G23090.2 41.667 108 60 1 410 514 104 211 6.82e-16 79.3
Msa0629860 AT5G40360.1 43.529 85 45 3 269 352 177 259 6.82e-16 79.7
Msa0629860 AT3G50060.1 48.810 84 41 2 268 350 24 106 7.00e-16 79.0
Msa0629860 AT3G23090.4 41.667 108 60 1 410 514 140 247 7.94e-16 79.7
Msa0629860 AT3G23090.3 41.667 108 60 1 410 514 140 247 8.49e-16 79.7
Msa0629860 AT5G58850.1 43.182 88 44 2 284 370 138 220 8.75e-16 80.1
Msa0629860 AT1G17950.1 42.045 88 49 2 268 354 23 109 9.29e-16 77.4
Msa0629860 AT3G09370.2 46.429 84 43 2 268 350 153 235 9.58e-16 80.5
Msa0629860 AT3G09370.1 46.429 84 43 2 268 350 148 230 9.60e-16 80.5
Msa0629860 AT3G09370.3 46.429 84 43 2 268 350 161 243 1.19e-15 80.1
Msa0629860 AT4G37260.1 50.685 73 35 1 284 355 46 118 1.42e-15 78.2
Msa0629860 AT1G69560.2 41.111 90 49 3 268 355 141 228 1.48e-15 78.6
Msa0629860 AT1G69560.1 41.573 89 48 3 268 354 125 211 1.55e-15 78.2
Msa0629860 AT5G67300.1 47.619 84 42 2 268 350 24 106 3.07e-15 77.0
Msa0629860 AT1G26780.1 41.111 90 49 3 266 353 114 201 3.47e-15 76.6
Msa0629860 AT5G61420.1 64.815 54 18 1 317 369 2 55 4.22e-15 76.3
Msa0629860 AT1G26780.2 41.111 90 49 3 266 353 114 201 4.68e-15 77.0
Msa0629860 AT3G04630.3 56.897 58 25 0 457 514 91 148 7.68e-15 75.5
Msa0629860 AT3G04630.1 56.897 58 25 0 457 514 87 144 7.72e-15 75.5
Msa0629860 AT3G04630.2 56.897 58 25 0 457 514 86 143 7.91e-15 75.5
Msa0629860 AT5G11050.1 47.059 68 35 1 284 350 138 205 9.35e-15 76.6
Msa0629860 AT4G32730.5 42.353 85 47 2 268 351 105 188 9.94e-15 77.8
Msa0629860 AT4G32730.4 42.353 85 47 2 268 351 105 188 9.94e-15 77.8
Msa0629860 AT4G32730.3 42.353 85 47 2 268 351 105 188 9.94e-15 77.8
Msa0629860 AT4G32730.2 42.353 85 47 2 268 351 105 188 9.94e-15 77.8
Msa0629860 AT1G73410.1 46.591 88 43 3 268 353 24 109 1.12e-14 74.3
Msa0629860 AT3G29020.1 36.792 106 65 2 266 370 81 185 1.13e-14 73.9
Msa0629860 AT4G32730.1 42.353 85 47 2 268 351 105 188 1.17e-14 77.4
Msa0629860 AT2G23290.1 39.252 107 50 3 245 350 21 113 1.30e-14 75.1
Msa0629860 AT1G73410.2 46.591 88 43 3 268 353 24 109 1.72e-14 72.8
Msa0629860 AT3G29020.2 38.889 90 53 2 266 354 83 171 1.80e-14 74.7
Msa0629860 AT5G40430.1 42.857 84 45 3 273 355 76 157 2.38e-14 73.6
Msa0629860 AT4G33450.1 41.379 87 49 2 268 353 37 122 3.58e-14 72.8
Msa0629860 AT5G11510.3 41.176 85 48 2 268 351 99 182 9.35e-14 74.7
Msa0629860 AT5G11510.1 41.176 85 48 2 268 351 99 182 9.35e-14 74.7
Msa0629860 AT5G11510.4 41.176 85 48 2 268 351 99 182 9.35e-14 74.7
Msa0629860 AT5G11510.2 41.176 85 48 2 268 351 99 182 1.26e-13 74.3
Msa0629860 AT5G11510.5 41.176 85 48 2 268 351 99 182 1.34e-13 73.9
Msa0629860 AT5G17800.1 43.836 73 40 1 282 353 124 196 3.22e-13 71.2
Msa0629860 AT1G74430.2 58.824 51 20 1 314 363 9 59 6.30e-13 68.2
Msa0629860 AT4G00540.2 40.426 94 54 2 261 353 117 209 9.66e-13 70.5
Msa0629860 AT4G00540.1 40.426 94 54 2 261 353 115 207 1.33e-12 70.1
Msa0629860 AT1G54460.1 54.545 66 28 1 449 514 119 182 1.84e-12 68.9
Msa0629860 AT5G14340.2 38.095 84 46 3 324 405 10 89 7.69e-12 64.7
Msa0629860 AT2G37630.1 40.580 69 41 0 282 350 38 106 9.53e-12 67.0
Msa0629860 AT5G15310.3 66.667 45 14 1 324 367 9 53 1.98e-11 64.7
Msa0629860 AT1G14350.2 35.870 92 57 2 266 356 41 131 8.20e-11 64.7
Msa0629860 AT1G14350.1 35.870 92 57 2 266 356 41 131 8.20e-11 64.7

Find 146 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGCTTAATTTGGCAAATT+TGG 0.083870 4_3:+11261412 None:intergenic
TTCTCTGGTCTTAAGGAAAA+TGG 0.186374 4_3:+11261947 Msa0629860:intron
GTTAAAATGCTTCAAGAAAA+TGG 0.189462 4_3:-11266538 Msa0629870:CDS
CTCTATGATTTGCACATTAC+TGG 0.200071 4_3:+11263144 Msa0629860:CDS
ATTTCTTCCAACATATTATT+AGG 0.203969 4_3:+11266430 Msa0629860:three_prime_UTR
GATTCATGTTCAGTTGCTTC+TGG 0.221500 4_3:+11264969 Msa0629860:CDS
CTGGACAGCAAATGGACTTT+TGG 0.227715 4_3:+11262432 Msa0629860:CDS
ATTTCCATTGCATATGCTTT+TGG 0.239502 4_3:-11264314 None:intergenic
TTAAAATGTTTCTTGTTATC+AGG 0.245894 4_3:-11264939 None:intergenic
TTGCTTCTGCTCCAAGCTTT+TGG 0.254437 4_3:+11265152 Msa0629860:CDS
ATTGCATGTCTTCACAAATA+AGG 0.262358 4_3:+11266847 Msa0629860:three_prime_UTR
GAAGAATCAAACTGTTGATT+TGG 0.276473 4_3:+11261595 Msa0629860:CDS
ATCCTAAAGTTGCTGATTCT+TGG 0.280363 4_3:-11266399 Msa0629870:CDS
TTTCAAAAGGTTCAATTCAT+TGG 0.290203 4_3:-11264231 None:intergenic
TCTCCGGTGAAGGTGGTTCC+TGG 0.315021 4_3:+11262413 Msa0629860:CDS
ACTTCTCCTCAACTGTTTGA+TGG 0.326642 4_3:-11265481 None:intergenic
CATATAGTCTGAGACAGATA+TGG 0.328234 4_3:+11265588 Msa0629860:three_prime_UTR
TGGGTTATGACAGCTTTGTT+AGG 0.333171 4_3:-11266481 Msa0629870:CDS
AAATAAGGTACATAAAATAA+AGG 0.338924 4_3:+11266862 Msa0629860:three_prime_UTR
TCAAATTGCGGCGCAATTGC+CGG 0.345914 4_3:+11264046 Msa0629860:CDS
ATTTCATTGTCTGTCCTTCC+CGG 0.348044 4_3:-11264065 None:intergenic
TGTCTTCTAGCGCTGCGTTT+GGG 0.352671 4_3:-11263002 None:intergenic
CCTTTCCTCAAGGAATATAA+TGG 0.356155 4_3:-11265954 Msa0629870:CDS
TGAAGTCTCCTTCAGTTTCA+AGG 0.359899 4_3:+11264904 Msa0629860:CDS
TCCTAAAGTTGCTGATTCTT+GGG 0.362623 4_3:-11266398 Msa0629870:CDS
TTGTCTTCTAGCGCTGCGTT+TGG 0.365799 4_3:-11263003 None:intergenic
AGTATGGCTTCATGTGGTTA+TGG 0.367564 4_3:-11266616 Msa0629870:CDS
AAGAACAGAATCCAAAGAAA+TGG 0.369003 4_3:+11266734 Msa0629860:three_prime_UTR
AACGATTAAGGATGAGAAAT+AGG 0.376803 4_3:+11265455 Msa0629860:intron
CAGACAATGAAATGAATCTA+TGG 0.377303 4_3:+11264075 Msa0629860:CDS
AAGAAGAGACTGAGGCAAAA+AGG 0.381753 4_3:+11264110 Msa0629860:CDS
AGGTAGTTCTTCACCCAAAC+GGG 0.381791 4_3:+11262021 Msa0629860:CDS
TGAAGTGCAATAGCCCCGTT+TGG 0.382272 4_3:-11262035 None:intergenic
TTGTCTGAGGTTGAGAATAA+TGG 0.383111 4_3:+11264158 Msa0629860:CDS
TTCATGCAGTACTAGGAAAT+AGG 0.390350 4_3:+11263861 Msa0629860:CDS
ACCCAAGAATCAGCAACTTT+AGG 0.400367 4_3:+11266397 Msa0629860:three_prime_UTR
AAAAGCATATGCAATGGAAA+TGG 0.406668 4_3:+11264316 Msa0629860:CDS
GTTGAACTTCATGCAGTACT+AGG 0.413389 4_3:+11263854 Msa0629860:CDS
CAAAAGTCCATTTGCTGTCC+AGG 0.414057 4_3:-11262431 None:intergenic
TTCAAATTGCATATAGAAGA+AGG 0.414598 4_3:+11261444 Msa0629860:CDS
ATTCATGTTCAGTTGCTTCT+GGG 0.418308 4_3:+11264970 Msa0629860:CDS
TTCAATATCTAACTCAGTTA+TGG 0.421715 4_3:-11261510 None:intergenic
TTGAACTCTCTGATTTCAAA+AGG 0.423755 4_3:-11264244 None:intergenic
AACTGTTTGATGCTGATGAA+TGG 0.424478 4_3:-11266501 Msa0629870:CDS
AGCAACAATATTTATTCTGC+AGG 0.424774 4_3:-11263575 None:intergenic
CTGTGAGGTCGTTCAAATCC+AGG 0.426868 4_3:+11265122 Msa0629860:CDS
GTGGTAAGAGCTGCAGGCTT+AGG 0.429634 4_3:+11263765 Msa0629860:CDS
TTCTTGTTATCAGGTTTCAA+TGG 0.432356 4_3:-11264930 None:intergenic
TGGAGCAGCTCAGTCAGACT+TGG 0.433717 4_3:+11262452 Msa0629860:CDS
GGTGGTTCCTGGACAGCAAA+TGG 0.440739 4_3:+11262424 Msa0629860:CDS
TCAGCAAAATCACCTTTCTT+CGG 0.447990 4_3:-11261476 None:intergenic
ATTAATTTACCTGCTTGCTT+AGG 0.450338 4_3:-11263637 None:intergenic
CGTTCAGTTGACCAAAAGCT+TGG 0.451908 4_3:-11265163 None:intergenic
CAAATTGCGGCGCAATTGCC+GGG 0.453452 4_3:+11264047 Msa0629860:CDS
TCTATTTGATGTCAAGAGAA+AGG 0.462460 4_3:+11262933 Msa0629860:CDS
GGGTTATGACAGCTTTGTTA+GGG 0.463256 4_3:-11266480 Msa0629870:CDS
AATAAGGTACATAAAATAAA+GGG 0.467124 4_3:+11266863 Msa0629860:three_prime_UTR
AGGATTAAGTTGCCGAAGAA+AGG 0.469199 4_3:+11261464 Msa0629860:CDS
TAAAGGGTAAATACAGACTT+TGG 0.470277 4_3:+11266879 Msa0629860:three_prime_UTR
GCATCTCAACCTGCCTTCTC+CGG 0.470321 4_3:+11262397 Msa0629860:CDS
CGAGTTTGAAATGAAGTTGG+CGG 0.472685 4_3:+11263427 Msa0629860:CDS
AGAACAGAATCCAAAGAAAT+GGG 0.473481 4_3:+11266735 Msa0629860:three_prime_UTR
TGGGAAGAAAGAATGATTGT+AGG 0.476056 4_3:+11265608 Msa0629860:three_prime_UTR
TTTCGAGTTTGAAATGAAGT+TGG 0.477365 4_3:+11263424 Msa0629860:CDS
GCTTCATGTGGTTATGGAGT+TGG 0.481868 4_3:-11266610 Msa0629870:CDS
AAAAGGGAACGTGTGATTCA+AGG 0.489998 4_3:+11266769 Msa0629860:three_prime_UTR
TAATATACATCAGCATTGAA+TGG 0.490605 4_3:+11265840 Msa0629860:three_prime_UTR
CGACGTTGTTTGGAGGAAGT+TGG 0.492551 4_3:+11266560 Msa0629860:three_prime_UTR
AACTTGATGTTTAATCCACC+AGG 0.497562 4_3:+11266346 Msa0629860:intron
CAACCTGCCTTCTCCGGTGA+AGG 0.502982 4_3:+11262403 Msa0629860:CDS
AAGGTAGTTCTTCACCCAAA+CGG 0.503508 4_3:+11262020 Msa0629860:CDS
AGGAAGTTGGTGAGTGGCCA+TGG 0.507094 4_3:+11266573 Msa0629860:three_prime_UTR
CAACGTATGGTCATGGATGT+TGG 0.507786 4_3:+11263605 Msa0629860:CDS
TTATGCTCTAGATTTGAGTC+TGG 0.508618 4_3:+11265813 Msa0629860:three_prime_UTR
GAAGTGCAATAGCCCCGTTT+GGG 0.509640 4_3:-11262034 None:intergenic
GACAATGGTTTATGAGTCAC+AGG 0.514909 4_3:-11264140 None:intergenic
AGCAGAAGCAACAGTCGCCC+TGG 0.516389 4_3:-11265140 None:intergenic
TTATTCTCAACCTCAGACAA+TGG 0.517875 4_3:-11264155 None:intergenic
AAAGATGTGGTAAGAGCTGC+AGG 0.517924 4_3:+11263759 Msa0629860:CDS
TGTCCAGGAACCACCTTCAC+CGG 0.518048 4_3:-11262416 None:intergenic
AATGGTTTCCTTGAAACTGA+AGG 0.520980 4_3:-11264912 None:intergenic
ACTGTTTGATGCTGATGAAT+GGG 0.521377 4_3:-11266500 Msa0629870:CDS
GTAAGAGCTGCAGGCTTAGG+TGG 0.521603 4_3:+11263768 Msa0629860:CDS
TTGCGGCGCAATTGCCGGGA+AGG 0.523236 4_3:+11264051 Msa0629860:CDS
GGCCCCTCATGGTAAAAGCT+TGG 0.526227 4_3:-11265528 None:intergenic
CCTGCCTTCTCCGGTGAAGG+TGG 0.526967 4_3:+11262406 Msa0629860:CDS
TCTCTCAACAATGCAGGACT+TGG 0.528802 4_3:-11265885 Msa0629870:CDS
CTATTTGATGTCAAGAGAAA+GGG 0.531783 4_3:+11262934 Msa0629860:CDS
ATGCAGTAATTGATATTACA+AGG 0.532867 4_3:+11261997 Msa0629860:CDS
TCATTGGATAATAATATCTC+CGG 0.533248 4_3:-11264215 None:intergenic
TTTGTTAGGGACTGATATTG+AGG 0.534874 4_3:-11266467 Msa0629870:CDS
AGCAATTCCTAATAATATGT+TGG 0.536423 4_3:-11266437 Msa0629870:CDS
GGAACCACCTTCACCGGAGA+AGG 0.536674 4_3:-11262410 None:intergenic
ATATAGTCTGAGACAGATAT+GGG 0.538261 4_3:+11265589 Msa0629860:three_prime_UTR
GTTTGTATATTCTTAAGAGC+TGG 0.539478 4_3:+11265909 Msa0629860:three_prime_UTR
TTCTTAAGTATGGCTTCATG+TGG 0.542109 4_3:-11266622 Msa0629870:CDS
CCATTATATTCCTTGAGGAA+AGG 0.542881 4_3:+11265954 Msa0629860:three_prime_UTR
AAAACATCAAAGACTTCAAG+AGG 0.543881 4_3:-11261572 None:intergenic
TCCACCAGGGTACAAGTAGC+TGG 0.558594 4_3:+11266360 Msa0629860:three_prime_UTR
GGAGCAGCTCAGTCAGACTT+GGG 0.558663 4_3:+11262453 Msa0629860:CDS
TAAGAGTCAAGAGAAAGCAC+CGG 0.560716 4_3:+11264196 Msa0629860:CDS
TTATGGAGTTGGAGTCAAGT+GGG 0.563532 4_3:-11266599 Msa0629870:CDS
GTCACCAGCTACTTGTACCC+TGG 0.565315 4_3:-11266364 Msa0629870:CDS
CTGTGTGAAAATCTGAACTT+AGG 0.565864 4_3:-11265555 None:intergenic
CTTCTAGCGCTGCGTTTGGG+TGG 0.565868 4_3:-11262999 None:intergenic
TATTGCAGATACATTGCACT+TGG 0.566057 4_3:-11265984 Msa0629870:intron
AACAATATTTATTCTGCAGG+TGG 0.566902 4_3:-11263572 None:intergenic
TTCTATTCAAAATCAAGCAA+TGG 0.570585 4_3:+11265290 Msa0629860:CDS
TTCACCAAAAGCATATGCAA+TGG 0.574736 4_3:+11264310 Msa0629860:CDS
CAAACATCTCTCAACAATGC+AGG 0.576418 4_3:-11265891 Msa0629870:CDS
TGGCAATGAACCTTTCCTCA+AGG 0.576590 4_3:-11265964 Msa0629870:CDS
TATCAGATGGTCTCAAATTG+CGG 0.579070 4_3:+11264034 Msa0629860:intron
TGAACGTGCACAAAGAAGAA+AGG 0.582792 4_3:+11265180 Msa0629860:CDS
TTATCAGGTTTGCAAAGATG+TGG 0.585835 4_3:+11263746 Msa0629860:intron
CCACCTTCACCGGAGAAGGC+AGG 0.588222 4_3:-11262406 None:intergenic
GTTATGGAGTTGGAGTCAAG+TGG 0.589186 4_3:-11266600 Msa0629870:CDS
TGGAGTCAAGTGGGGAACCA+TGG 0.589713 4_3:-11266590 Msa0629870:CDS
ATGTTCCATTATATTCCTTG+AGG 0.590467 4_3:+11265949 Msa0629860:three_prime_UTR
ACCAGCTACTTGTACCCTGG+TGG 0.596849 4_3:-11266361 Msa0629870:CDS
AGTAATTGATATTACAAGGA+AGG 0.597240 4_3:+11262001 Msa0629860:CDS
ACTTAGGTGGAGGCCCCTCA+TGG 0.600742 4_3:-11265539 None:intergenic
GATCGACGAATCGACTGAGT+AGG 0.604180 4_3:-11261632 None:intergenic
GCATATGCAATGGAAATGGA+AGG 0.607612 4_3:+11264320 Msa0629860:CDS
AAGAGGAACATTCTCACAAG+AGG 0.608650 4_3:+11263817 Msa0629860:CDS
AGGAAGCCATCAAACAGTTG+AGG 0.610052 4_3:+11265475 Msa0629860:three_prime_UTR
GATAGAACAACGTATGGTCA+TGG 0.614248 4_3:+11263598 Msa0629860:CDS
TGTGAGGTCGTTCAAATCCA+GGG 0.620972 4_3:+11265123 Msa0629860:CDS
GTTGCTGATAGAACAACGTA+TGG 0.625794 4_3:+11263592 Msa0629860:CDS
GAAAATCTGAACTTAGGTGG+AGG 0.628282 4_3:-11265549 None:intergenic
AGTTCAGTACCTAAGCAAGC+AGG 0.631698 4_3:+11263628 Msa0629860:CDS
GTTTGGAGGAAGTTGGTGAG+TGG 0.635572 4_3:+11266567 Msa0629860:three_prime_UTR
TATGTTGGAAGAAATAAGCA+AGG 0.636385 4_3:-11266422 Msa0629870:CDS
TGGCTTTATAGAGCGTCCAA+AGG 0.639835 4_3:+11263164 Msa0629860:CDS
TGTGAAAATCTGAACTTAGG+TGG 0.642569 4_3:-11265552 None:intergenic
TGAAGGAGACTTCAACTGCA+AGG 0.644382 4_3:-11264895 None:intergenic
TGAGGTTGAGAATAATGGAG+AGG 0.653412 4_3:+11264163 Msa0629860:CDS
ACTTGATGTTTAATCCACCA+GGG 0.662823 4_3:+11266347 Msa0629860:intron
ATCAGCATTGAATGGAACTG+TGG 0.669599 4_3:+11265848 Msa0629860:three_prime_UTR
ATATTGAAGAGACATTCAAG+AGG 0.670492 4_3:+11261525 Msa0629860:CDS
GACTCATAAACCATTGTCTG+AGG 0.676132 4_3:+11264145 Msa0629860:CDS
TATGGAGTTGGAGTCAAGTG+GGG 0.676243 4_3:-11266598 Msa0629870:CDS
CATGTTTGAAGAAGAGACTG+AGG 0.677238 4_3:+11264102 Msa0629860:CDS
GATAGAAACAATTCTAGACA+AGG 0.686128 4_3:+11263457 Msa0629860:CDS
ACGTGCACAAAGAAGAAAGG+AGG 0.694653 4_3:+11265183 Msa0629860:CDS
GGTAGTTCTTCACCCAAACG+GGG 0.698076 4_3:+11262022 Msa0629860:CDS
AAAGAACTGCAACTTCTGTG+AGG 0.712590 4_3:+11265107 Msa0629860:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTTATTAACAAATATAA+TGG - chr4_3:11261685-11261704 None:intergenic 10.0%
!!! CTTAGATAATTTAATTTAAA+AGG + chr4_3:11262657-11262676 Msa0629860:intron 10.0%
!! ATTATATTATTATATGCTAA+TGG - chr4_3:11263678-11263697 None:intergenic 10.0%
!!! AATTTTTGTTTAATATTATC+AGG + chr4_3:11263731-11263750 Msa0629860:intron 10.0%
!!! ATGAACATAATTTTTTAAAA+CGG - chr4_3:11264006-11264025 None:intergenic 10.0%
!!! AAATTTAATATTTTTCTAAC+TGG + chr4_3:11264458-11264477 Msa0629860:intron 10.0%
!! AATAAAATCATAAAATTCAG+TGG - chr4_3:11263245-11263264 None:intergenic 15.0%
!! ATTTCATATCTAATATTCTA+TGG - chr4_3:11263546-11263565 None:intergenic 15.0%
!!! TTAATTAGTTTTGTTTCAAT+AGG + chr4_3:11265219-11265238 Msa0629860:intron 15.0%
!!! TAATTAGTTTTGTTTCAATA+GGG + chr4_3:11265220-11265239 Msa0629860:intron 15.0%
!! TAGAATTAATTATAAAGTAG+AGG - chr4_3:11265679-11265698 None:intergenic 15.0%
!! CTAAATCAAATAATAAGTTT+AGG - chr4_3:11265791-11265810 Msa0629870:CDS 15.0%
!!! CTAAACTTATTATTTGATTT+AGG + chr4_3:11265789-11265808 Msa0629860:intron 15.0%
!! AAATAAGGTACATAAAATAA+AGG + chr4_3:11266862-11266881 Msa0629860:three_prime_UTR 15.0%
!! AATAAGGTACATAAAATAAA+GGG + chr4_3:11266863-11266882 Msa0629860:three_prime_UTR 15.0%
!! ATAAAACAAATTTGATCCAA+TGG - chr4_3:11261900-11261919 None:intergenic 20.0%
!! CTGAAAAGGATAAAAAATTT+AGG - chr4_3:11262579-11262598 None:intergenic 20.0%
!!! AAAAAGTTATTTCACAAGAA+TGG - chr4_3:11262856-11262875 None:intergenic 20.0%
!!! AAATAACTTTTTCAATTGAC+TGG + chr4_3:11262864-11262883 Msa0629860:intron 20.0%
!! CTTATATATCTATGTTAGAA+TGG + chr4_3:11264505-11264524 Msa0629860:intron 20.0%
!! ATAATCTTTCACTTATATCT+TGG - chr4_3:11264543-11264562 None:intergenic 20.0%
!!! TTTTATGAAATGGACTATAT+AGG - chr4_3:11264579-11264598 None:intergenic 20.0%
!! CAAAATCAATTATCTTACAT+AGG - chr4_3:11264662-11264681 None:intergenic 20.0%
!!! CTATGTAAGATAATTGATTT+TGG + chr4_3:11264660-11264679 Msa0629860:intron 20.0%
!!! TTAAAATGTTTCTTGTTATC+AGG - chr4_3:11264942-11264961 None:intergenic 20.0%
!! TTATAAACCTTATAGTCAAA+GGG + chr4_3:11265001-11265020 Msa0629860:intron 20.0%
!! AAAATATCATTGCTAGAATA+AGG - chr4_3:11265051-11265070 None:intergenic 20.0%
!! AGAAGAATAAAAAATAAGCA+AGG + chr4_3:11265319-11265338 Msa0629860:exon 20.0%
!! AAAAAATAAGCAAGGTAAAA+AGG + chr4_3:11265327-11265346 Msa0629860:intron 20.0%
!! AAAAATAAGCAAGGTAAAAA+GGG + chr4_3:11265328-11265347 Msa0629860:intron 20.0%
!! ATTTCTTCCAACATATTATT+AGG + chr4_3:11266430-11266449 Msa0629860:three_prime_UTR 20.0%
!!! CATTATTTTCTTCTTAAGTA+TGG - chr4_3:11266635-11266654 Msa0629870:CDS 20.0%
!! TGAAACTCAGAAAAAAAAAT+TGG - chr4_3:11266704-11266723 None:intergenic 20.0%
!! GAAACGTAAAAATAAGTTAA+GGG - chr4_3:11266906-11266925 None:intergenic 20.0%
!! TGAAACGTAAAAATAAGTTA+AGG - chr4_3:11266907-11266926 None:intergenic 20.0%
! TTCAAATTGCATATAGAAGA+AGG + chr4_3:11261444-11261463 Msa0629860:CDS 25.0%
! TTCAATATCTAACTCAGTTA+TGG - chr4_3:11261513-11261532 None:intergenic 25.0%
!! TGTTTGGATTGATTTATTTG+AGG + chr4_3:11261765-11261784 Msa0629860:intron 25.0%
! TAAACATTTGTGAGACTATT+TGG + chr4_3:11261801-11261820 Msa0629860:intron 25.0%
! AAACATTTGTGAGACTATTT+GGG + chr4_3:11261802-11261821 Msa0629860:intron 25.0%
! ATGCAGTAATTGATATTACA+AGG + chr4_3:11261997-11262016 Msa0629860:CDS 25.0%
! AGTAATTGATATTACAAGGA+AGG + chr4_3:11262001-11262020 Msa0629860:CDS 25.0%
!! AAGCATTTTGAATCTGAAAA+AGG + chr4_3:11262059-11262078 Msa0629860:CDS 25.0%
! ACAATTAGGAATGATAGTAT+TGG + chr4_3:11262322-11262341 Msa0629860:intron 25.0%
! TTGGCTTCTTCAAAAAAAAA+AGG + chr4_3:11262341-11262360 Msa0629860:intron 25.0%
! TTCTTTATAAGACCTTCATT+AGG - chr4_3:11262615-11262634 None:intergenic 25.0%
!! AATGAAGGTCTTATAAAGAA+TGG + chr4_3:11262615-11262634 Msa0629860:intron 25.0%
! ATATCACTGATATGAATGAA+AGG - chr4_3:11262766-11262785 None:intergenic 25.0%
! TTAAGGTAAACAACAATAAG+TGG - chr4_3:11263058-11263077 None:intergenic 25.0%
! TGTCCTGATATATTATGTTT+GGG + chr4_3:11263098-11263117 Msa0629860:intron 25.0%
! AATCCCAAACATAATATATC+AGG - chr4_3:11263104-11263123 None:intergenic 25.0%
! AATAATAATCATCTCACCTT+TGG - chr4_3:11263183-11263202 None:intergenic 25.0%
!! CAGAAAAAAAGTTTTCACTT+AGG - chr4_3:11263268-11263287 None:intergenic 25.0%
!!! CTAAGTGAAAACTTTTTTTC+TGG + chr4_3:11263266-11263285 Msa0629860:intron 25.0%
! AAAATGATATCAATGAGAAG+AGG - chr4_3:11263333-11263352 None:intergenic 25.0%
! TATGCTAATGGAGATAAAAT+TGG - chr4_3:11263666-11263685 None:intergenic 25.0%
! TTAAGACCTGATTTAAAAAG+AGG + chr4_3:11263800-11263819 Msa0629860:CDS 25.0%
!! AATGTTCCTCTTTTTAAATC+AGG - chr4_3:11263809-11263828 None:intergenic 25.0%
! CATAGGAGAAGATAAAAATA+GGG - chr4_3:11263910-11263929 None:intergenic 25.0%
!! TTCATTTTCTTCTTATCAGA+TGG + chr4_3:11264021-11264040 Msa0629860:intron 25.0%
! TCATTGGATAATAATATCTC+CGG - chr4_3:11264218-11264237 None:intergenic 25.0%
! TTTCAAAAGGTTCAATTCAT+TGG - chr4_3:11264234-11264253 None:intergenic 25.0%
!! ACAAAGAGTTTTTCATAGAT+AGG + chr4_3:11264351-11264370 Msa0629860:CDS 25.0%
!! TATTTTTCTAACTGGAACAT+AGG + chr4_3:11264466-11264485 Msa0629860:intron 25.0%
!! ATTTTTCTAACTGGAACATA+GGG + chr4_3:11264467-11264486 Msa0629860:intron 25.0%
! TCCATTTCATAAAATCACTT+GGG + chr4_3:11264585-11264604 Msa0629860:intron 25.0%
! AATTAAAGAATGCTTCCAAA+GGG - chr4_3:11264616-11264635 None:intergenic 25.0%
! AAATTAAAGAATGCTTCCAA+AGG - chr4_3:11264617-11264636 None:intergenic 25.0%
! TCAGAACAAAAGAAATTGAA+TGG - chr4_3:11264758-11264777 None:intergenic 25.0%
!! TTCTTTGTTATATAGTGCAA+TGG + chr4_3:11264781-11264800 Msa0629860:intron 25.0%
!! TCTTTGTTATATAGTGCAAT+GGG + chr4_3:11264782-11264801 Msa0629860:intron 25.0%
! TTCAGATAGTGAAATGTTTA+TGG + chr4_3:11264814-11264833 Msa0629860:intron 25.0%
!!! TAACAAGAAACATTTTAACG+AGG + chr4_3:11264944-11264963 Msa0629860:CDS 25.0%
! CTTATAAACCTTATAGTCAA+AGG + chr4_3:11265000-11265019 Msa0629860:intron 25.0%
! AACTATGACACAAATAAAAG+GGG - chr4_3:11265272-11265291 None:intergenic 25.0%
! GAACTATGACACAAATAAAA+GGG - chr4_3:11265273-11265292 None:intergenic 25.0%
! AGAACTATGACACAAATAAA+AGG - chr4_3:11265274-11265293 None:intergenic 25.0%
! TTCTATTCAAAATCAAGCAA+TGG + chr4_3:11265290-11265309 Msa0629860:CDS 25.0%
!!! TCTAATTTGTTCAACGATTA+AGG + chr4_3:11265443-11265462 Msa0629860:intron 25.0%
!! TAATATACATCAGCATTGAA+TGG + chr4_3:11265840-11265859 Msa0629860:three_prime_UTR 25.0%
! TGAAGATTATAGACAGAATA+TGG + chr4_3:11266074-11266093 Msa0629860:intron 25.0%
! TGATGAATGAATGTTGAATA+TGG + chr4_3:11266301-11266320 Msa0629860:intron 25.0%
! TGAATGTTGAATATGGTTAT+AGG + chr4_3:11266308-11266327 Msa0629860:intron 25.0%
! AGCAATTCCTAATAATATGT+TGG - chr4_3:11266440-11266459 Msa0629870:CDS 25.0%
! GTTAAAATGCTTCAAGAAAA+TGG - chr4_3:11266541-11266560 Msa0629870:CDS 25.0%
ATATTGAAGAGACATTCAAG+AGG + chr4_3:11261525-11261544 Msa0629860:CDS 30.0%
AAAACATCAAAGACTTCAAG+AGG - chr4_3:11261575-11261594 None:intergenic 30.0%
! GAAGAATCAAACTGTTGATT+TGG + chr4_3:11261595-11261614 Msa0629860:CDS 30.0%
GTCATAACTTAGTTGTGTTA+TGG + chr4_3:11261707-11261726 Msa0629860:intron 30.0%
TTGGGAGAATTTATATTTCC+TGG + chr4_3:11261820-11261839 Msa0629860:intron 30.0%
TGTTATCTCTGTAAAACCAT+TGG + chr4_3:11261881-11261900 Msa0629860:intron 30.0%
! AAGTTTACTGATTAAGAAGC+AGG - chr4_3:11261929-11261948 None:intergenic 30.0%
TCTTAATCAGTAAACTTCTC+TGG + chr4_3:11261932-11261951 Msa0629860:intron 30.0%
ATTGTGTTCCAACAAAATGA+TGG - chr4_3:11262096-11262115 None:intergenic 30.0%
!!! TACCTTCGTGTTGATTTTTA+TGG - chr4_3:11262244-11262263 None:intergenic 30.0%
ATACTAGACGAGATACAATT+AGG + chr4_3:11262308-11262327 Msa0629860:intron 30.0%
TCTTAAACGCAATGAGTAAA+TGG + chr4_3:11262524-11262543 Msa0629860:intron 30.0%
AGGTAAACAACAATAAGTAG+AGG - chr4_3:11262715-11262734 None:intergenic 30.0%
!! TCTACTTATTGTTGTTTACC+TGG + chr4_3:11262714-11262733 Msa0629860:intron 30.0%
AAATGAAAGAAGAGTCATGA+GGG - chr4_3:11262816-11262835 None:intergenic 30.0%
TAAATGAAAGAAGAGTCATG+AGG - chr4_3:11262817-11262836 None:intergenic 30.0%
AATTTCTGACATCGTATCAA+TGG - chr4_3:11262894-11262913 None:intergenic 30.0%
TCTATTTGATGTCAAGAGAA+AGG + chr4_3:11262933-11262952 Msa0629860:CDS 30.0%
CTATTTGATGTCAAGAGAAA+GGG + chr4_3:11262934-11262953 Msa0629860:CDS 30.0%
AGATCAAAGTGAGGAATTTA+AGG - chr4_3:11263075-11263094 None:intergenic 30.0%
CTGTCCTGATATATTATGTT+TGG + chr4_3:11263097-11263116 Msa0629860:intron 30.0%
!!! AAACGTGTCATTTTCATTGA+GGG - chr4_3:11263216-11263235 None:intergenic 30.0%
!!! GAAAACTTTTTTTCTGGTCT+TGG + chr4_3:11263272-11263291 Msa0629860:intron 30.0%
!! TTGCTTTTCTTTCCCTTATT+TGG + chr4_3:11263362-11263381 Msa0629860:intron 30.0%
!! TTTCGAGTTTGAAATGAAGT+TGG + chr4_3:11263424-11263443 Msa0629860:CDS 30.0%
GATAGAAACAATTCTAGACA+AGG + chr4_3:11263457-11263476 Msa0629860:CDS 30.0%
AACAATATTTATTCTGCAGG+TGG - chr4_3:11263575-11263594 None:intergenic 30.0%
AGCAACAATATTTATTCTGC+AGG - chr4_3:11263578-11263597 None:intergenic 30.0%
ATTAATTTACCTGCTTGCTT+AGG - chr4_3:11263640-11263659 None:intergenic 30.0%
CCATAGGAGAAGATAAAAAT+AGG - chr4_3:11263911-11263930 None:intergenic 30.0%
!!! CCTATTTTTATCTTCTCCTA+TGG + chr4_3:11263908-11263927 Msa0629860:intron 30.0%
CGGACAATATTAGTATTGTT+AGG - chr4_3:11263986-11264005 None:intergenic 30.0%
CAGACAATGAAATGAATCTA+TGG + chr4_3:11264075-11264094 Msa0629860:CDS 30.0%
TTGAACTCTCTGATTTCAAA+AGG - chr4_3:11264247-11264266 None:intergenic 30.0%
! ATTTCCATTGCATATGCTTT+TGG - chr4_3:11264317-11264336 None:intergenic 30.0%
! AAAAGCATATGCAATGGAAA+TGG + chr4_3:11264316-11264335 Msa0629860:CDS 30.0%
AAATTTCCCATCAAATCTGA+GGG - chr4_3:11264386-11264405 None:intergenic 30.0%
AAAATTTCCCATCAAATCTG+AGG - chr4_3:11264387-11264406 None:intergenic 30.0%
TTTGTATAACTCATCTGAAG+TGG - chr4_3:11264410-11264429 None:intergenic 30.0%
! TTTTTCTAACTGGAACATAG+GGG + chr4_3:11264468-11264487 Msa0629860:intron 30.0%
GTCCATTTCATAAAATCACT+TGG + chr4_3:11264584-11264603 Msa0629860:intron 30.0%
! ACCCAAGTGATTTTATGAAA+TGG - chr4_3:11264589-11264608 None:intergenic 30.0%
CTTACATAGGTATAGATTCA+AGG - chr4_3:11264649-11264668 None:intergenic 30.0%
! TTCTTGTTATCAGGTTTCAA+TGG - chr4_3:11264933-11264952 None:intergenic 30.0%
! GGTTTTCATCTCAAATTGAT+CGG + chr4_3:11265241-11265260 Msa0629860:intron 30.0%
CAGAATGACAATGTAATTCA+TGG - chr4_3:11265376-11265395 None:intergenic 30.0%
AACGATTAAGGATGAGAAAT+AGG + chr4_3:11265455-11265474 Msa0629860:intron 30.0%
! ATATAGTCTGAGACAGATAT+GGG + chr4_3:11265589-11265608 Msa0629860:three_prime_UTR 30.0%
GTTTGTATATTCTTAAGAGC+TGG + chr4_3:11265909-11265928 Msa0629860:three_prime_UTR 30.0%
ATGTTCCATTATATTCCTTG+AGG + chr4_3:11265949-11265968 Msa0629860:three_prime_UTR 30.0%
!! TTTTCTGCTCATATTTCTGA+AGG - chr4_3:11266132-11266151 Msa0629870:intron 30.0%
TTCAGAAATATGAGCAGAAA+AGG + chr4_3:11266131-11266150 Msa0629860:intron 30.0%
AAAAAACCATTGCTACAAAC+TGG + chr4_3:11266157-11266176 Msa0629860:intron 30.0%
ACCAAGAAAAATGAAAGACA+TGG + chr4_3:11266217-11266236 Msa0629860:intron 30.0%
!! ACCATGTCTTTCATTTTTCT+TGG - chr4_3:11266221-11266240 Msa0629870:intron 30.0%
TATGTTGGAAGAAATAAGCA+AGG - chr4_3:11266425-11266444 Msa0629870:CDS 30.0%
AAGAACAGAATCCAAAGAAA+TGG + chr4_3:11266734-11266753 Msa0629860:three_prime_UTR 30.0%
AGAACAGAATCCAAAGAAAT+GGG + chr4_3:11266735-11266754 Msa0629860:three_prime_UTR 30.0%
!!! TTTTTTCACTCCCATTTCTT+TGG - chr4_3:11266748-11266767 None:intergenic 30.0%
AATGGGAGTGAAAAAAGAAA+AGG + chr4_3:11266752-11266771 Msa0629860:three_prime_UTR 30.0%
ATGGGAGTGAAAAAAGAAAA+GGG + chr4_3:11266753-11266772 Msa0629860:three_prime_UTR 30.0%
ATTGCATGTCTTCACAAATA+AGG + chr4_3:11266847-11266866 Msa0629860:three_prime_UTR 30.0%
TAAAGGGTAAATACAGACTT+TGG + chr4_3:11266879-11266898 Msa0629860:three_prime_UTR 30.0%
TCAGCAAAATCACCTTTCTT+CGG - chr4_3:11261479-11261498 None:intergenic 35.0%
GACAATAAATGCGACAACAA+TGG - chr4_3:11261737-11261756 None:intergenic 35.0%
TTGTCGCATTTATTGTCTAG+AGG + chr4_3:11261740-11261759 Msa0629860:intron 35.0%
! TTATTGTCTAGAGGCATGTT+TGG + chr4_3:11261749-11261768 Msa0629860:intron 35.0%
!! AGTAAACTTCTCTGGTCTTA+AGG + chr4_3:11261940-11261959 Msa0629860:intron 35.0%
!! TTCTCTGGTCTTAAGGAAAA+TGG + chr4_3:11261947-11261966 Msa0629860:intron 35.0%
! CAGCATTTCCATCATTTTGT+TGG + chr4_3:11262085-11262104 Msa0629860:intron 35.0%
AGTGTCTCATATTGCAAAGA+CGG - chr4_3:11262143-11262162 None:intergenic 35.0%
!! TGCGCTTTGTTTGATATCAT+TGG + chr4_3:11262192-11262211 Msa0629860:intron 35.0%
AGCCATAAAAATCAACACGA+AGG + chr4_3:11262239-11262258 Msa0629860:intron 35.0%
ACGAAGGTAAATCAATGTAG+CGG + chr4_3:11262255-11262274 Msa0629860:intron 35.0%
! TAAATCAATGTAGCGGAGAT+CGG + chr4_3:11262262-11262281 Msa0629860:intron 35.0%
GATTGATGTTGACACTGAAA+AGG - chr4_3:11262593-11262612 None:intergenic 35.0%
GTCAACATCAATCCTAATGA+AGG + chr4_3:11262600-11262619 Msa0629860:intron 35.0%
AATGAAAGAAGAGTCATGAG+GGG - chr4_3:11262815-11262834 None:intergenic 35.0%
AGAATGGCTTAGTTTCATCT+TGG - chr4_3:11262840-11262859 None:intergenic 35.0%
AGGTAAACAACAATAAGTGG+AGG - chr4_3:11263055-11263074 None:intergenic 35.0%
! ATTTTCCTGCAGTCTCATTT+AGG + chr4_3:11263121-11263140 Msa0629860:intron 35.0%
! CTCTATGATTTGCACATTAC+TGG + chr4_3:11263144-11263163 Msa0629860:CDS 35.0%
!!! CAAACGTGTCATTTTCATTG+AGG - chr4_3:11263217-11263236 None:intergenic 35.0%
TGTCAGACATCACCAAATAA+GGG - chr4_3:11263377-11263396 None:intergenic 35.0%
TTATCAGGTTTGCAAAGATG+TGG + chr4_3:11263746-11263765 Msa0629860:intron 35.0%
TTCATGCAGTACTAGGAAAT+AGG + chr4_3:11263861-11263880 Msa0629860:CDS 35.0%
TATCACTCTTGCTTAACCAT+AGG - chr4_3:11263927-11263946 None:intergenic 35.0%
ATGGTTAAGCAAGAGTGATA+AGG + chr4_3:11263927-11263946 Msa0629860:intron 35.0%
TATCAGATGGTCTCAAATTG+CGG + chr4_3:11264034-11264053 Msa0629860:intron 35.0%
TTATTCTCAACCTCAGACAA+TGG - chr4_3:11264158-11264177 None:intergenic 35.0%
! TTGTCTGAGGTTGAGAATAA+TGG + chr4_3:11264158-11264177 Msa0629860:CDS 35.0%
! TTCACCAAAAGCATATGCAA+TGG + chr4_3:11264310-11264329 Msa0629860:CDS 35.0%
ATTCAACCCTCAGATTTGAT+GGG + chr4_3:11264377-11264396 Msa0629860:intron 35.0%
TTATATAGTGCAATGGGCAT+AGG + chr4_3:11264788-11264807 Msa0629860:intron 35.0%
AATGGTTTCCTTGAAACTGA+AGG - chr4_3:11264915-11264934 None:intergenic 35.0%
ATTCATGTTCAGTTGCTTCT+GGG + chr4_3:11264970-11264989 Msa0629860:CDS 35.0%
TTTGACACCCTTTGACTATA+AGG - chr4_3:11265011-11265030 None:intergenic 35.0%
AGAAGTTGCAGTTCTTTACA+TGG - chr4_3:11265104-11265123 None:intergenic 35.0%
TGTGAAAATCTGAACTTAGG+TGG - chr4_3:11265555-11265574 None:intergenic 35.0%
CTGTGTGAAAATCTGAACTT+AGG - chr4_3:11265558-11265577 None:intergenic 35.0%
! CATATAGTCTGAGACAGATA+TGG + chr4_3:11265588-11265607 Msa0629860:three_prime_UTR 35.0%
TGGGAAGAAAGAATGATTGT+AGG + chr4_3:11265608-11265627 Msa0629860:three_prime_UTR 35.0%
! TTATGCTCTAGATTTGAGTC+TGG + chr4_3:11265813-11265832 Msa0629860:three_prime_UTR 35.0%
CCTTTCCTCAAGGAATATAA+TGG - chr4_3:11265957-11265976 Msa0629870:CDS 35.0%
CCATTATATTCCTTGAGGAA+AGG + chr4_3:11265954-11265973 Msa0629860:three_prime_UTR 35.0%
TATTGCAGATACATTGCACT+TGG - chr4_3:11265987-11266006 Msa0629870:intron 35.0%
AGATTACCAGTTTGTAGCAA+TGG - chr4_3:11266166-11266185 Msa0629870:intron 35.0%
AACTTGATGTTTAATCCACC+AGG + chr4_3:11266346-11266365 Msa0629860:intron 35.0%
ACTTGATGTTTAATCCACCA+GGG + chr4_3:11266347-11266366 Msa0629860:intron 35.0%
TTTGTTAGGGACTGATATTG+AGG - chr4_3:11266470-11266489 Msa0629870:CDS 35.0%
ACTGTTTGATGCTGATGAAT+GGG - chr4_3:11266503-11266522 Msa0629870:CDS 35.0%
AACTGTTTGATGCTGATGAA+TGG - chr4_3:11266504-11266523 Msa0629870:CDS 35.0%
!! AGCATTTTAACGACGTTGTT+TGG + chr4_3:11266550-11266569 Msa0629860:three_prime_UTR 35.0%
!! ATTTTAACGACGTTGTTTGG+AGG + chr4_3:11266553-11266572 Msa0629860:three_prime_UTR 35.0%
TTCTTAAGTATGGCTTCATG+TGG - chr4_3:11266625-11266644 Msa0629870:CDS 35.0%
! AGGATTAAGTTGCCGAAGAA+AGG + chr4_3:11261464-11261483 Msa0629860:CDS 40.0%
CGATCTTTGCTGCAAAAACA+TGG + chr4_3:11261650-11261669 Msa0629860:CDS 40.0%
CTTTGCTGCAAAAACATGGA+AGG + chr4_3:11261654-11261673 Msa0629860:CDS 40.0%
TTCAGAAACTTCAACTGACC+AGG - chr4_3:11261841-11261860 None:intergenic 40.0%
AAGGTAGTTCTTCACCCAAA+CGG + chr4_3:11262020-11262039 Msa0629860:CDS 40.0%
CTGTCAGACATCACCAAATA+AGG - chr4_3:11263378-11263397 None:intergenic 40.0%
!! CTTATTTGGTGATGTCTGAC+AGG + chr4_3:11263376-11263395 Msa0629860:intron 40.0%
! CGAGTTTGAAATGAAGTTGG+CGG + chr4_3:11263427-11263446 Msa0629860:CDS 40.0%
GTTGCTGATAGAACAACGTA+TGG + chr4_3:11263592-11263611 Msa0629860:CDS 40.0%
GATAGAACAACGTATGGTCA+TGG + chr4_3:11263598-11263617 Msa0629860:CDS 40.0%
AAGAGGAACATTCTCACAAG+AGG + chr4_3:11263817-11263836 Msa0629860:CDS 40.0%
GTTGAACTTCATGCAGTACT+AGG + chr4_3:11263854-11263873 Msa0629860:CDS 40.0%
GTTAAGCAAGAGTGATAAGG+AGG + chr4_3:11263930-11263949 Msa0629860:intron 40.0%
ATTTCATTGTCTGTCCTTCC+CGG - chr4_3:11264068-11264087 None:intergenic 40.0%
CATGTTTGAAGAAGAGACTG+AGG + chr4_3:11264102-11264121 Msa0629860:CDS 40.0%
AAGAAGAGACTGAGGCAAAA+AGG + chr4_3:11264110-11264129 Msa0629860:CDS 40.0%
GACAATGGTTTATGAGTCAC+AGG - chr4_3:11264143-11264162 None:intergenic 40.0%
GACTCATAAACCATTGTCTG+AGG + chr4_3:11264145-11264164 Msa0629860:CDS 40.0%
! TGAGGTTGAGAATAATGGAG+AGG + chr4_3:11264163-11264182 Msa0629860:CDS 40.0%
! TAAGAGTCAAGAGAAAGCAC+CGG + chr4_3:11264196-11264215 Msa0629860:CDS 40.0%
GCATATGCAATGGAAATGGA+AGG + chr4_3:11264320-11264339 Msa0629860:CDS 40.0%
CATTCAACCCTCAGATTTGA+TGG + chr4_3:11264376-11264395 Msa0629860:intron 40.0%
ATCACTTGGGTAAAACCCTT+TGG + chr4_3:11264598-11264617 Msa0629860:intron 40.0%
TGAAGTCTCCTTCAGTTTCA+AGG + chr4_3:11264904-11264923 Msa0629860:CDS 40.0%
GATTCATGTTCAGTTGCTTC+TGG + chr4_3:11264969-11264988 Msa0629860:CDS 40.0%
TGCAGTTCTTTACATGGTCA+CGG - chr4_3:11265098-11265117 None:intergenic 40.0%
AAAGAACTGCAACTTCTGTG+AGG + chr4_3:11265107-11265126 Msa0629860:intron 40.0%
TGAACGTGCACAAAGAAGAA+AGG + chr4_3:11265180-11265199 Msa0629860:CDS 40.0%
ACTTCTCCTCAACTGTTTGA+TGG - chr4_3:11265484-11265503 None:intergenic 40.0%
! TATGCCAAGCTTTTACCATG+AGG + chr4_3:11265524-11265543 Msa0629860:three_prime_UTR 40.0%
! ATGCCAAGCTTTTACCATGA+GGG + chr4_3:11265525-11265544 Msa0629860:three_prime_UTR 40.0%
GAAAATCTGAACTTAGGTGG+AGG - chr4_3:11265552-11265571 None:intergenic 40.0%
! ATCAGCATTGAATGGAACTG+TGG + chr4_3:11265848-11265867 Msa0629860:three_prime_UTR 40.0%
CAAACATCTCTCAACAATGC+AGG - chr4_3:11265894-11265913 Msa0629870:CDS 40.0%
! GGTAAAAGCACAGTGAGTAA+AGG + chr4_3:11266238-11266257 Msa0629860:intron 40.0%
!! GGGTTATGACAGCTTTGTTA+GGG - chr4_3:11266483-11266502 Msa0629870:CDS 40.0%
!! TGGGTTATGACAGCTTTGTT+AGG - chr4_3:11266484-11266503 Msa0629870:CDS 40.0%
TTATGGAGTTGGAGTCAAGT+GGG - chr4_3:11266602-11266621 Msa0629870:CDS 40.0%
AGTATGGCTTCATGTGGTTA+TGG - chr4_3:11266619-11266638 Msa0629870:CDS 40.0%
AAAAGGGAACGTGTGATTCA+AGG + chr4_3:11266769-11266788 Msa0629860:three_prime_UTR 40.0%
AGGTAGTTCTTCACCCAAAC+GGG + chr4_3:11262021-11262040 Msa0629860:CDS 45.0%
AGATCGGAATGTTGTGCTAG+AGG + chr4_3:11262278-11262297 Msa0629860:intron 45.0%
!! CAAAAGTCCATTTGCTGTCC+AGG - chr4_3:11262434-11262453 None:intergenic 45.0%
!! CTGGACAGCAAATGGACTTT+TGG + chr4_3:11262432-11262451 Msa0629860:CDS 45.0%
AGGACAGACAGATCAAAGTG+AGG - chr4_3:11263084-11263103 None:intergenic 45.0%
TAGAGCCTAAATGAGACTGC+AGG - chr4_3:11263129-11263148 None:intergenic 45.0%
!! TGGCTTTATAGAGCGTCCAA+AGG + chr4_3:11263164-11263183 Msa0629860:CDS 45.0%
CAACGTATGGTCATGGATGT+TGG + chr4_3:11263605-11263624 Msa0629860:CDS 45.0%
AGTTCAGTACCTAAGCAAGC+AGG + chr4_3:11263628-11263647 Msa0629860:CDS 45.0%
AAAGATGTGGTAAGAGCTGC+AGG + chr4_3:11263759-11263778 Msa0629860:CDS 45.0%
AAGAGTGATAAGGAGGTCGA+GGG + chr4_3:11263937-11263956 Msa0629860:intron 45.0%
TGAAGGAGACTTCAACTGCA+AGG - chr4_3:11264898-11264917 None:intergenic 45.0%
TGTGAGGTCGTTCAAATCCA+GGG + chr4_3:11265123-11265142 Msa0629860:CDS 45.0%
! TTGCTTCTGCTCCAAGCTTT+TGG + chr4_3:11265152-11265171 Msa0629860:CDS 45.0%
CGTTCAGTTGACCAAAAGCT+TGG - chr4_3:11265166-11265185 None:intergenic 45.0%
ACGTGCACAAAGAAGAAAGG+AGG + chr4_3:11265183-11265202 Msa0629860:CDS 45.0%
AGGAAGCCATCAAACAGTTG+AGG + chr4_3:11265475-11265494 Msa0629860:three_prime_UTR 45.0%
! TGCCAAGCTTTTACCATGAG+GGG + chr4_3:11265526-11265545 Msa0629860:three_prime_UTR 45.0%
TCTCTCAACAATGCAGGACT+TGG - chr4_3:11265888-11265907 Msa0629870:CDS 45.0%
TGGCAATGAACCTTTCCTCA+AGG - chr4_3:11265967-11265986 Msa0629870:CDS 45.0%
! CTCATATTTCTGAAGGCTGC+AGG - chr4_3:11266125-11266144 Msa0629870:intron 45.0%
TATGGAGTTGGAGTCAAGTG+GGG - chr4_3:11266601-11266620 Msa0629870:CDS 45.0%
GTTATGGAGTTGGAGTCAAG+TGG - chr4_3:11266603-11266622 Msa0629870:CDS 45.0%
GCTTCATGTGGTTATGGAGT+TGG - chr4_3:11266613-11266632 Msa0629870:CDS 45.0%
!!! TTAGATAATTTAATTTAAAA+GGG + chr4_3:11262658-11262677 Msa0629860:intron 5.0%
GATCGACGAATCGACTGAGT+AGG - chr4_3:11261635-11261654 None:intergenic 50.0%
GGTAGTTCTTCACCCAAACG+GGG + chr4_3:11262022-11262041 Msa0629860:CDS 50.0%
GAAGTGCAATAGCCCCGTTT+GGG - chr4_3:11262037-11262056 None:intergenic 50.0%
TGAAGTGCAATAGCCCCGTT+TGG - chr4_3:11262038-11262057 None:intergenic 50.0%
GATGCAAGCACAAATTCGCC+AGG - chr4_3:11262735-11262754 None:intergenic 50.0%
TGTCTTCTAGCGCTGCGTTT+GGG - chr4_3:11263005-11263024 None:intergenic 50.0%
TTGTCTTCTAGCGCTGCGTT+TGG - chr4_3:11263006-11263025 None:intergenic 50.0%
CAAGAGTGATAAGGAGGTCG+AGG + chr4_3:11263936-11263955 Msa0629860:intron 50.0%
TCAAATTGCGGCGCAATTGC+CGG + chr4_3:11264046-11264065 Msa0629860:CDS 50.0%
CTGTGAGGTCGTTCAAATCC+AGG + chr4_3:11265122-11265141 Msa0629860:CDS 50.0%
CGACGTTGTTTGGAGGAAGT+TGG + chr4_3:11266560-11266579 Msa0629860:three_prime_UTR 50.0%
!! GTTTGGAGGAAGTTGGTGAG+TGG + chr4_3:11266567-11266586 Msa0629860:three_prime_UTR 50.0%
GCATCTCAACCTGCCTTCTC+CGG + chr4_3:11262397-11262416 Msa0629860:CDS 55.0%
TGTCCAGGAACCACCTTCAC+CGG - chr4_3:11262419-11262438 None:intergenic 55.0%
GGTGGTTCCTGGACAGCAAA+TGG + chr4_3:11262424-11262443 Msa0629860:CDS 55.0%
TGGAGCAGCTCAGTCAGACT+TGG + chr4_3:11262452-11262471 Msa0629860:CDS 55.0%
GGAGCAGCTCAGTCAGACTT+GGG + chr4_3:11262453-11262472 Msa0629860:CDS 55.0%
GTGGTAAGAGCTGCAGGCTT+AGG + chr4_3:11263765-11263784 Msa0629860:CDS 55.0%
GTAAGAGCTGCAGGCTTAGG+TGG + chr4_3:11263768-11263787 Msa0629860:CDS 55.0%
CAAATTGCGGCGCAATTGCC+GGG + chr4_3:11264047-11264066 Msa0629860:CDS 55.0%
GGCCCCTCATGGTAAAAGCT+TGG - chr4_3:11265531-11265550 None:intergenic 55.0%
TCCACCAGGGTACAAGTAGC+TGG + chr4_3:11266360-11266379 Msa0629860:three_prime_UTR 55.0%
ACCAGCTACTTGTACCCTGG+TGG - chr4_3:11266364-11266383 Msa0629870:CDS 55.0%
GTCACCAGCTACTTGTACCC+TGG - chr4_3:11266367-11266386 Msa0629870:CDS 55.0%
!! AGGAAGTTGGTGAGTGGCCA+TGG + chr4_3:11266573-11266592 Msa0629860:three_prime_UTR 55.0%
TGGAGTCAAGTGGGGAACCA+TGG - chr4_3:11266593-11266612 Msa0629870:CDS 55.0%
CAACCTGCCTTCTCCGGTGA+AGG + chr4_3:11262403-11262422 Msa0629860:CDS 60.0%
GGAACCACCTTCACCGGAGA+AGG - chr4_3:11262413-11262432 None:intergenic 60.0%
TCTCCGGTGAAGGTGGTTCC+TGG + chr4_3:11262413-11262432 Msa0629860:CDS 60.0%
CTTCTAGCGCTGCGTTTGGG+TGG - chr4_3:11263002-11263021 None:intergenic 60.0%
CGAGGGCTCGATCTCACTCT+CGG + chr4_3:11263954-11263973 Msa0629860:intron 60.0%
AGCAGAAGCAACAGTCGCCC+TGG - chr4_3:11265143-11265162 None:intergenic 60.0%
ACTTAGGTGGAGGCCCCTCA+TGG - chr4_3:11265542-11265561 None:intergenic 60.0%
CCACCTTCACCGGAGAAGGC+AGG - chr4_3:11262409-11262428 None:intergenic 65.0%
CCTGCCTTCTCCGGTGAAGG+TGG + chr4_3:11262406-11262425 Msa0629860:CDS 65.0%
TTGCGGCGCAATTGCCGGGA+AGG + chr4_3:11264051-11264070 Msa0629860:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 11261413 11266926 11261413 ID=Msa0629860;Name=Msa0629860
chr4_3 mRNA 11261413 11266926 11261413 ID=Msa0629860-mRNA-1;Parent=Msa0629860;Name=Msa0629860-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0.64|0.6|1|0.78|0.73|15|966|519
chr4_3 exon 11261413 11261675 11261413 ID=Msa0629860-mRNA-1:exon:3367;Parent=Msa0629860-mRNA-1
chr4_3 exon 11261962 11262080 11261962 ID=Msa0629860-mRNA-1:exon:3368;Parent=Msa0629860-mRNA-1
chr4_3 exon 11262386 11262506 11262386 ID=Msa0629860-mRNA-1:exon:3369;Parent=Msa0629860-mRNA-1
chr4_3 exon 11262909 11263033 11262909 ID=Msa0629860-mRNA-1:exon:3370;Parent=Msa0629860-mRNA-1
chr4_3 exon 11263133 11263185 11263133 ID=Msa0629860-mRNA-1:exon:3371;Parent=Msa0629860-mRNA-1
chr4_3 exon 11263398 11263478 11263398 ID=Msa0629860-mRNA-1:exon:3372;Parent=Msa0629860-mRNA-1
chr4_3 exon 11263571 11263649 11263571 ID=Msa0629860-mRNA-1:exon:3373;Parent=Msa0629860-mRNA-1
chr4_3 exon 11263753 11263882 11263753 ID=Msa0629860-mRNA-1:exon:3374;Parent=Msa0629860-mRNA-1
chr4_3 exon 11264040 11264372 11264040 ID=Msa0629860-mRNA-1:exon:3375;Parent=Msa0629860-mRNA-1
chr4_3 exon 11264860 11264991 11264860 ID=Msa0629860-mRNA-1:exon:3376;Parent=Msa0629860-mRNA-1
chr4_3 exon 11265111 11265204 11265111 ID=Msa0629860-mRNA-1:exon:3377;Parent=Msa0629860-mRNA-1
chr4_3 exon 11265290 11265340 11265290 ID=Msa0629860-mRNA-1:exon:3378;Parent=Msa0629860-mRNA-1
chr4_3 exon 11265465 11265643 11265465 ID=Msa0629860-mRNA-1:exon:3379;Parent=Msa0629860-mRNA-1
chr4_3 exon 11265811 11266001 11265811 ID=Msa0629860-mRNA-1:exon:3380;Parent=Msa0629860-mRNA-1
chr4_3 exon 11266352 11266926 11266352 ID=Msa0629860-mRNA-1:exon:3381;Parent=Msa0629860-mRNA-1
chr4_3 CDS 11261413 11261675 11261413 ID=Msa0629860-mRNA-1:cds;Parent=Msa0629860-mRNA-1
chr4_3 CDS 11261962 11262080 11261962 ID=Msa0629860-mRNA-1:cds;Parent=Msa0629860-mRNA-1
chr4_3 CDS 11262386 11262506 11262386 ID=Msa0629860-mRNA-1:cds;Parent=Msa0629860-mRNA-1
chr4_3 CDS 11262909 11263033 11262909 ID=Msa0629860-mRNA-1:cds;Parent=Msa0629860-mRNA-1
chr4_3 CDS 11263133 11263185 11263133 ID=Msa0629860-mRNA-1:cds;Parent=Msa0629860-mRNA-1
chr4_3 CDS 11263398 11263478 11263398 ID=Msa0629860-mRNA-1:cds;Parent=Msa0629860-mRNA-1
chr4_3 CDS 11263571 11263649 11263571 ID=Msa0629860-mRNA-1:cds;Parent=Msa0629860-mRNA-1
chr4_3 CDS 11263753 11263882 11263753 ID=Msa0629860-mRNA-1:cds;Parent=Msa0629860-mRNA-1
chr4_3 CDS 11264040 11264372 11264040 ID=Msa0629860-mRNA-1:cds;Parent=Msa0629860-mRNA-1
chr4_3 CDS 11264860 11264991 11264860 ID=Msa0629860-mRNA-1:cds;Parent=Msa0629860-mRNA-1
chr4_3 CDS 11265111 11265204 11265111 ID=Msa0629860-mRNA-1:cds;Parent=Msa0629860-mRNA-1
chr4_3 CDS 11265290 11265319 11265290 ID=Msa0629860-mRNA-1:cds;Parent=Msa0629860-mRNA-1
chr4_3 three_prime_UTR 11265320 11265340 11265320 ID=Msa0629860-mRNA-1:three_prime_utr;Parent=Msa0629860-mRNA-1
chr4_3 three_prime_UTR 11265465 11265643 11265465 ID=Msa0629860-mRNA-1:three_prime_utr;Parent=Msa0629860-mRNA-1
chr4_3 three_prime_UTR 11265811 11266001 11265811 ID=Msa0629860-mRNA-1:three_prime_utr;Parent=Msa0629860-mRNA-1
chr4_3 three_prime_UTR 11266352 11266926 11266352 ID=Msa0629860-mRNA-1:three_prime_utr;Parent=Msa0629860-mRNA-1
Gene Sequence

>Msa0629860

ATGCTTAATTTGGCAAATTTGGCTGAAGAAGTTCAAATTGCATATAGAAGAAGGATTAAGTTGCCGAAGAAAGGTGATTTTGCTGATGAAAATTCTGCCATAACTGAGTTAGATATTGAAGAGACATTCAAGAGGCTTGTGACTGAACTCAAGAAGACTCCTCTTGAAGTCTTTGATGTTTTGAAGAATCAAACTGTTGATTTGGTCATAATTGCTCATCCTACTCAGTCGATTCGTCGATCTTTGCTGCAAAAACATGGAAGGAAAATGGTTTTCTTACTTCATGTATGCTTTTTGTATGCAGTAATTGATATTACAAGGAAGGTAGTTCTTCACCCAAACGGGGCTATTGCACTTCAGAAGCATTTTGAATCTGAAAAAGAAAAGATAGTTGCATCTCAACCTGCCTTCTCCGGTGAAGGTGGTTCCTGGACAGCAAATGGACTTTTGGAGCAGCTCAGTCAGACTTGGGATAAGTCAGATTATTTGTGTTACATGACAGAAAATTTATACGTGCAGATCTTTGATCTATTTGATGTCAAGAGAAAGGGTGTTGTTGATTTTGATGACTTCGTTAGATCTCTCAATGTCTTCCACCCAAACGCAGCGCTAGAAGACAATATAGAATTCTCATTTAGGCTCTATGATTTGCACATTACTGGCTTTATAGAGCGTCCAAAGGTCAAGCAAATGTTAATTGCACTTCTTTTCGAGTTTGAAATGAAGTTGGCGGATGATGTGATAGAAACAATTCTAGACAAGTCCACCTGCAGAATAAATATTGTTGCTGATAGAACAACGTATGGTCATGGATGTTGGAGTTCAGTACCTAAGCAAGCAGGTTTGCAAAGATGTGGTAAGAGCTGCAGGCTTAGGTGGATCAATTACTTAAGACCTGATTTAAAAAGAGGAACATTCTCACAAGAGGAAGAAAATCACATTGTTGAACTTCATGCAGTACTAGGAAATAGATGGTCTCAAATTGCGGCGCAATTGCCGGGAAGGACAGACAATGAAATGAATCTATGGAACTCATGTTTGAAGAAGAGACTGAGGCAAAAAGGTATAGATCCTGTGACTCATAAACCATTGTCTGAGGTTGAGAATAATGGAGAGGAAAATGCTAATAAGAGTCAAGAGAAAGCACCGGAGATATTATTATCCAATGAATTGAACCTTTTGAAATCAGAGAGTTCAAAATCAGATGCAGCTTCTAGCTATGAGCAAAGAACATCTTCAATTTCACCAAAAGCATATGCAATGGAAATGGAAGGTTCTTGCAACAAAGAGTTTTTCATAGATAGAGTTAGTTTCGAAACTTTTGTTTTGACTGTTTGTGCCTTGCAGTTGAAGTCTCCTTCAGTTTCAAGGAAACCATTGAAACCTGATAACAAGAAACATTTTAACGAGGACGATTCATGTTCAGTTGCTTCTGGAACTGCAACTTCTGTGAGGTCGTTCAAATCCAGGGCGACTGTTGCTTCTGCTCCAAGCTTTTGGTCAACTGAACGTGCACAAAGAAGAAAGGAGTTCTATTCAAAATCAAGCAATGGAAGCTGA
Protein sequence

>Msa0629860

MLNLANLAEEVQIAYRRRIKLPKKGDFADENSAITELDIEETFKRLVTELKKTPLEVFDVLKNQTVDLVIIAHPTQSIRRSLLQKHGRKMVFLLHVCFLYAVIDITRKVVLHPNGAIALQKHFESEKEKIVASQPAFSGEGGSWTANGLLEQLSQTWDKSDYLCYMTENLYVQIFDLFDVKRKGVVDFDDFVRSLNVFHPNAALEDNIEFSFRLYDLHITGFIERPKVKQMLIALLFEFEMKLADDVIETILDKSTCRINIVADRTTYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENHIVELHAVLGNRWSQIAAQLPGRTDNEMNLWNSCLKKRLRQKGIDPVTHKPLSEVENNGEENANKSQEKAPEILLSNELNLLKSESSKSDAASSYEQRTSSISPKAYAMEMEGSCNKEFFIDRVSFETFVLTVCALQLKSPSVSRKPLKPDNKKHFNEDDSCSVASGTATSVRSFKSRATVASAPSFWSTERAQRRKEFYSKSSNGS*