AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0633710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0633710 MtrunA17_Chr4g0025881 95.652 460 17 1 1 457 1 460 0.0 908
Msa0633710 MtrunA17_Chr1g0177351 58.314 439 170 7 19 451 25 456 3.77e-170 486
Msa0633710 MtrunA17_Chr3g0142581 47.569 288 141 3 126 413 93 370 2.71e-82 258
Msa0633710 MtrunA17_Chr4g0059551 46.269 67 36 0 135 201 17 83 7.00e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0633710 AT5G22220.2 57.306 438 149 10 19 430 13 438 2.22e-156 451
Msa0633710 AT5G22220.3 57.078 438 147 11 19 430 13 435 4.45e-154 446
Msa0633710 AT2G36010.1 52.174 437 156 12 19 420 39 457 3.26e-136 400
Msa0633710 AT2G36010.3 52.164 439 155 13 19 420 39 459 9.05e-135 397
Msa0633710 AT2G36010.2 42.887 478 169 14 19 420 39 488 5.10e-102 314
Msa0633710 AT1G47870.2 49.821 279 98 5 134 411 153 390 5.46e-78 248
Msa0633710 AT1G47870.1 49.821 279 98 5 134 411 154 391 5.68e-78 248
Msa0633710 AT5G14960.1 41.892 74 43 0 128 201 6 79 4.71e-12 67.8
Msa0633710 AT3G01330.1 37.647 85 48 1 135 219 21 100 6.05e-11 64.3
Msa0633710 AT3G48160.1 43.284 67 38 0 135 201 34 100 8.09e-11 63.9

Find 187 sgRNAs with CRISPR-Local

Find 492 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGGACTGGGTGGAAATT+TGG 0.170746 4_3:-19496757 None:intergenic
ATTTCCTTCCCTTTATCTTC+TGG 0.188827 4_3:-19496816 None:intergenic
CGGCGGTGGCGGGAGGAGTT+TGG 0.215958 4_3:-19491879 None:intergenic
CCAATATTTGAAGCATGATT+TGG 0.231140 4_3:-19497446 None:intergenic
CAACGATAGCTTCAGTTTCT+AGG 0.232583 4_3:-19492014 None:intergenic
CCAAATCATGCTTCAAATAT+TGG 0.245928 4_3:+19497446 Msa0633710:CDS
TTTCCTTCCCTTTATCTTCT+GGG 0.249433 4_3:-19496815 None:intergenic
CAATAGATGTTTACCTTGTT+AGG 0.273630 4_3:+19496522 Msa0633710:CDS
CTGGTCCGGCGCGGCGGTGG+CGG 0.277114 4_3:-19491890 None:intergenic
ATATGATGATGGAGGGAATT+TGG 0.281023 4_3:-19491724 None:intergenic
TTGTTAACTTTGTTAACTTC+TGG 0.286522 4_3:-19496774 None:intergenic
TGCAGAGTGATGCTGATTAC+TGG 0.287148 4_3:+19497149 Msa0633710:intron
AAAGAACTTGCCCTGCTTCC+AGG 0.295888 4_3:+19496179 Msa0633710:CDS
CAAACCCCTGGCTCAAATAT+TGG 0.299052 4_3:+19494422 Msa0633710:CDS
TCCAGCCAGACCTGCGAGTT+TGG 0.299194 4_3:+19497576 Msa0633710:three_prime_UTR
GGACTATCCTGTATCTTCTC+TGG 0.310480 4_3:-19496481 None:intergenic
CAATATTTGAAGCATGATTT+GGG 0.315454 4_3:-19497445 None:intergenic
GAGAGAAAGGGAAGAGGGAG+AGG 0.316103 4_3:-19491759 None:intergenic
GGCGGTGGCGGGAGGAGTTT+GGG 0.319463 4_3:-19491878 None:intergenic
CTAACAAGGTAAACATCTAT+TGG 0.320099 4_3:-19496521 None:intergenic
GCCGGTTGGATGAACAAATA+AGG 0.325041 4_3:+19495876 Msa0633710:CDS
AATTTGGCAGGTTCTCCTTC+AGG 0.331106 4_3:+19494615 Msa0633710:intron
AAGTTTCATATGACATTCTA+TGG 0.334315 4_3:+19497892 Msa0633710:three_prime_UTR
CTGCCGGCGATGGAAGGAAA+TGG 0.334804 4_3:-19491841 None:intergenic
TGGTCCGGCGCGGCGGTGGC+GGG 0.337037 4_3:-19491889 None:intergenic
AAGAACGCAACTTTCTCTTC+AGG 0.347009 4_3:-19497530 None:intergenic
TCTGTTCAGACGCCTGTATC+TGG 0.353596 4_3:+19494341 Msa0633710:CDS
CCCAACTTTGTATATTGTTA+TGG 0.357980 4_3:+19497754 Msa0633710:three_prime_UTR
CAGTTTCTAGGTCTTGATTC+CGG 0.365539 4_3:-19492002 None:intergenic
AACTTTGTTAACTTCTGGAC+TGG 0.365621 4_3:-19496769 None:intergenic
TCTTCTGGGACCACAGTTGA+TGG 0.368300 4_3:-19496801 None:intergenic
TGCCGGCGATGGAAGGAAAT+GGG 0.369744 4_3:-19491840 None:intergenic
GACCTGCGAGTTTGGATTGA+AGG 0.378224 4_3:+19497584 Msa0633710:three_prime_UTR
TCCTCTTAAATTACCTCATC+AGG 0.378875 4_3:-19496375 None:intergenic
TTGAAGCTGATTCAGGTGAT+AGG 0.380824 4_3:+19494285 Msa0633710:CDS
TAATGCTGCTGACACATTAG+AGG 0.382091 4_3:+19495246 Msa0633710:CDS
TGGAGCTTTAATTGCTATCA+AGG 0.383089 4_3:-19496325 None:intergenic
GAGAGATCTATGTATGTGTT+TGG 0.383335 4_3:-19491801 None:intergenic
TGTCGATATGACAGCTCATT+AGG 0.389268 4_3:+19494663 Msa0633710:CDS
ACCTTATTTGTTCATCCAAC+CGG 0.394452 4_3:-19495877 None:intergenic
GAGGTTTCATGGAGGAGAAA+GGG 0.395991 4_3:-19491933 None:intergenic
GACTATCCTGTATCTTCTCT+GGG 0.396885 4_3:-19496480 None:intergenic
TCTTGATTCCGGCGGTGATC+AGG 0.398412 4_3:-19491991 None:intergenic
TTGGGCCCATTGTGCTTCTC+AGG 0.407562 4_3:-19496502 None:intergenic
ACCATAACAATATACAAAGT+TGG 0.408444 4_3:-19497755 None:intergenic
TCAATTTGAAGAGAAGTTTG+AGG 0.408550 4_3:+19496710 Msa0633710:CDS
GGAGGTTTCATGGAGGAGAA+AGG 0.410632 4_3:-19491934 None:intergenic
AATTGAAAATTTAACAATTG+AGG 0.414178 4_3:+19495850 Msa0633710:CDS
TCCAAACTCGCAGGTCTGGC+TGG 0.414695 4_3:-19497577 None:intergenic
TGAAGTAGAATTTCGCTCTC+AGG 0.425268 4_3:+19497849 Msa0633710:three_prime_UTR
GACTGGCCATTCAGTTCCTC+AGG 0.425676 4_3:-19497649 None:intergenic
TCAATCCAAACTCGCAGGTC+TGG 0.426796 4_3:-19497581 None:intergenic
ACAAATGTTCTTGAAGGGAT+TGG 0.428377 4_3:+19495373 Msa0633710:CDS
GGCGAGAAAGGGAGGTTTCA+TGG 0.431767 4_3:-19491944 None:intergenic
TAACAAGGTAAACATCTATT+GGG 0.432965 4_3:-19496520 None:intergenic
TTGGCTGCTGCAGTGGATCC+AGG 0.433496 4_3:-19494314 None:intergenic
GATCTGGTCCGGCGCGGCGG+TGG 0.433940 4_3:-19491893 None:intergenic
CAGGTCTGGCTGGATGTCAT+AGG 0.435163 4_3:-19497567 None:intergenic
ACGTTCTGTTCTCCACATAT+CGG 0.435938 4_3:-19497200 None:intergenic
GGAAATAATCTCACCCCTGC+TGG 0.438993 4_3:+19494636 Msa0633710:CDS
CGGGAGAGAGAAAGGGAAGA+GGG 0.441997 4_3:-19491764 None:intergenic
GCGGGAGAGAGAAAGGGAAG+AGG 0.449496 4_3:-19491765 None:intergenic
GATATTACAAATGTTCTTGA+AGG 0.450884 4_3:+19495367 Msa0633710:CDS
TCCTCCCGCCACCGCCGCGC+CGG 0.451412 4_3:+19491885 Msa0633710:CDS
AGAGAAAGGGAAGAGGGAGA+GGG 0.453193 4_3:-19491758 None:intergenic
CGACATCCACCTGCCGGCGA+TGG 0.457326 4_3:-19491851 None:intergenic
CCATAACAATATACAAAGTT+GGG 0.461220 4_3:-19497754 None:intergenic
AGAAGAAGATGATATGATGA+TGG 0.461811 4_3:-19491735 None:intergenic
TATTTACAGCTGGGGTAGAA+TGG 0.463282 4_3:+19497366 Msa0633710:intron
ATGATGGAGGGAATTTGGTT+CGG 0.465060 4_3:-19491719 None:intergenic
CTGTGGTCCCAGAAGATAAA+GGG 0.466071 4_3:+19496808 Msa0633710:CDS
CATTTCCTTCCATCGCCGGC+AGG 0.467424 4_3:+19491842 Msa0633710:five_prime_UTR
AGGCGTCTGAACAGAACTAT+TGG 0.467482 4_3:-19494333 None:intergenic
TACAAAGTTGGGTTCACAAA+AGG 0.470204 4_3:-19497743 None:intergenic
TCATATCGACATGGACCAGC+AGG 0.470858 4_3:-19494651 None:intergenic
ATAATCTCCGGCGGCGAGAA+AGG 0.474469 4_3:-19491956 None:intergenic
CTGTAGGATGAAGCCTCAAA+AGG 0.476442 4_3:+19497495 Msa0633710:exon
GTTGACGTTGCTGCATGATC+TGG 0.476646 4_3:-19491909 None:intergenic
ATCGCCGGCAGGTGGATGTC+GGG 0.477202 4_3:+19491853 Msa0633710:exon
CATCGCCGGCAGGTGGATGT+CGG 0.479471 4_3:+19491852 Msa0633710:exon
ACGCCTGTATCTGGAAAAGC+GGG 0.480089 4_3:+19494350 Msa0633710:CDS
TATTCACCAATATTTGAGCC+AGG 0.483329 4_3:-19494428 None:intergenic
ACAGTAGTGTTGGATGTAGA+AGG 0.485534 4_3:-19497476 None:intergenic
TAAATTACCTCATCAGGATC+AGG 0.485605 4_3:-19496369 None:intergenic
TATGTATGTGTTTGGAAAGT+GGG 0.488736 4_3:-19491793 None:intergenic
AGAAGATGATATGATGATGG+AGG 0.491043 4_3:-19491732 None:intergenic
AACTTTGTATATTGTTATGG+TGG 0.492561 4_3:+19497757 Msa0633710:three_prime_UTR
GAACTGAATGGCCAGTCAAA+TGG 0.494260 4_3:+19497655 Msa0633710:three_prime_UTR
TCCGGCGCGGCGGTGGCGGG+AGG 0.494668 4_3:-19491886 None:intergenic
TGCGAAGCGGTGATAATCTC+CGG 0.499792 4_3:-19491968 None:intergenic
AGGGAAACTAACCTGGAAGC+AGG 0.501301 4_3:-19496190 None:intergenic
ATATTACAAATGTTCTTGAA+GGG 0.502697 4_3:+19495368 Msa0633710:CDS
ACTTTGTTAACTTCTGGACT+GGG 0.504154 4_3:-19496768 None:intergenic
AGCTCCACATGGTACCACTT+TGG 0.505985 4_3:+19496341 Msa0633710:CDS
ACTCACGAAGTCGTGATTGT+TGG 0.507659 4_3:-19496883 None:intergenic
ACTTTGTATATTGTTATGGT+GGG 0.509085 4_3:+19497758 Msa0633710:three_prime_UTR
AACAATCACGACTTCGTGAG+TGG 0.509503 4_3:+19496885 Msa0633710:CDS
ACTGTGGTCCCAGAAGATAA+AGG 0.510416 4_3:+19496807 Msa0633710:CDS
AAACTATCATCGGCCTCCCC+TGG 0.512893 4_3:-19495545 None:intergenic
AAACCTCCCTTTCTCGCCGC+CGG 0.513027 4_3:+19491949 Msa0633710:CDS
TTCCTTCCATCGCCGGCAGG+TGG 0.513681 4_3:+19491845 Msa0633710:five_prime_UTR
GGGCTGGATGTTTCAAAACC+AGG 0.516489 4_3:+19495527 Msa0633710:CDS
ATAGTCCTGAGAAGCACAAT+GGG 0.520665 4_3:+19496497 Msa0633710:CDS
AGAACTATTGGCTGCTGCAG+TGG 0.520736 4_3:-19494321 None:intergenic
TGTGTCTACAGGTGCAAAAG+AGG 0.522913 4_3:+19495335 Msa0633710:intron
TCAGGTGATAGGATGACTCC+TGG 0.524104 4_3:+19494296 Msa0633710:CDS
ATTATCCCCAGAGAAGATAC+AGG 0.527897 4_3:+19496474 Msa0633710:CDS
AACAATTGAGGAACGCCGGT+TGG 0.534246 4_3:+19495862 Msa0633710:CDS
TTCGCTCTCAGGCAAAGCGC+TGG 0.534642 4_3:+19497860 Msa0633710:three_prime_UTR
TGTATCTGGAAAAGCGGGGA+AGG 0.535094 4_3:+19494355 Msa0633710:CDS
ACTTCAAGAAGAATATTGTA+TGG 0.535285 4_3:+19497403 Msa0633710:CDS
ATCCACCTGCCGGCGATGGA+AGG 0.535692 4_3:-19491847 None:intergenic
CTTTGTATATTGTTATGGTG+GGG 0.538140 4_3:+19497759 Msa0633710:three_prime_UTR
TGGTTCGGATATTGATGTGG+AGG 0.543849 4_3:-19491704 None:intergenic
GCCGGCGATGGAAGGAAATG+GGG 0.546464 4_3:-19491839 None:intergenic
GCTTCATCCTACAGTAGTGT+TGG 0.548135 4_3:-19497486 None:intergenic
TTCACCAATATTTGAGCCAG+GGG 0.548468 4_3:-19494426 None:intergenic
TAATCTCCGGCGGCGAGAAA+GGG 0.551982 4_3:-19491955 None:intergenic
CGTTGCTGCATGATCTGGTC+CGG 0.555254 4_3:-19491904 None:intergenic
AAGTGACTTTGTACTTCTAG+AGG 0.555340 4_3:+19497707 Msa0633710:three_prime_UTR
GCGCGATGTATATGTTTGAA+AGG 0.555481 4_3:+19497798 Msa0633710:three_prime_UTR
TGTACAATTAGCCATTTGAC+TGG 0.562651 4_3:-19497666 None:intergenic
CATGATCTGGTCCGGCGCGG+CGG 0.564187 4_3:-19491896 None:intergenic
GTATCTGGAAAAGCGGGGAA+GGG 0.564530 4_3:+19494356 Msa0633710:CDS
GTGCAGAGACAAGATGGTGA+AGG 0.564861 4_3:+19496843 Msa0633710:CDS
AACCTTCAATCCAAACTCGC+AGG 0.568624 4_3:-19497586 None:intergenic
ATAGAAGTGCAGAGACAAGA+TGG 0.570446 4_3:+19496837 Msa0633710:CDS
GGTTCGGATATTGATGTGGA+GGG 0.573378 4_3:-19491703 None:intergenic
GGTGCCCGACATCCACCTGC+CGG 0.573384 4_3:-19491857 None:intergenic
ATTCACCAATATTTGAGCCA+GGG 0.575795 4_3:-19494427 None:intergenic
GGCTGGATGTTTCAAAACCA+GGG 0.577072 4_3:+19495528 Msa0633710:CDS
CTATGTATGTGTTTGGAAAG+TGG 0.579224 4_3:-19491794 None:intergenic
TCTGGAAAAGCGGGGAAGGG+AGG 0.580711 4_3:+19494359 Msa0633710:CDS
GCTTGTCCTGAGGAACTGAA+TGG 0.582233 4_3:+19497643 Msa0633710:three_prime_UTR
ATTTGGTTCGGATATTGATG+TGG 0.582286 4_3:-19491707 None:intergenic
GGATGTCATAGGTTCTCAGT+TGG 0.582778 4_3:-19497556 None:intergenic
TTGTTGGTAACATCTGTACT+AGG 0.584023 4_3:-19496867 None:intergenic
ATGTTAGCATAACCGATATG+TGG 0.584905 4_3:+19497188 Msa0633710:CDS
AGTGACTTTGTACTTCTAGA+GGG 0.585374 4_3:+19497708 Msa0633710:three_prime_UTR
TTAATAAAACAAGCAGAGGA+TGG 0.586297 4_3:+19495208 Msa0633710:CDS
CGAGTTAATAAAACAAGCAG+AGG 0.589364 4_3:+19495204 Msa0633710:CDS
GCTGGATGTTTCAAAACCAG+GGG 0.589441 4_3:+19495529 Msa0633710:CDS
TCTCCGGCGGCGAGAAAGGG+AGG 0.589461 4_3:-19491952 None:intergenic
AGAACTGGAACTCAAACCCC+TGG 0.591457 4_3:+19494410 Msa0633710:CDS
CCGGCGATGGAAGGAAATGG+GGG 0.591968 4_3:-19491838 None:intergenic
GGGATATGCAAGAAAGACTA+CGG 0.592203 4_3:+19495994 Msa0633710:intron
AACATTAAGCATACCTAACA+AGG 0.592586 4_3:-19496535 None:intergenic
TCTAGAAGTACAAAGTCACT+TGG 0.594365 4_3:-19497705 None:intergenic
TCTACATCCAACACTACTGT+AGG 0.599122 4_3:+19497479 Msa0633710:CDS
GAAGATGATATGATGATGGA+GGG 0.599295 4_3:-19491731 None:intergenic
ATGCTTACAGCAACATCTGA+AGG 0.604268 4_3:-19496924 None:intergenic
ATTTAACAATTGAGGAACGC+CGG 0.605519 4_3:+19495858 Msa0633710:CDS
GACGCCTGTATCTGGAAAAG+CGG 0.606450 4_3:+19494349 Msa0633710:CDS
GGGGTGAGATTATTTCCTGA+AGG 0.606593 4_3:-19494630 None:intergenic
CATATCGACATGGACCAGCA+GGG 0.607007 4_3:-19494650 None:intergenic
GGGAAACTAACCTGGAAGCA+GGG 0.607358 4_3:-19496189 None:intergenic
GCTTCGCACCTGATCACCGC+CGG 0.610030 4_3:+19491983 Msa0633710:CDS
TTGTTAACTTCTGGACTGGG+TGG 0.611129 4_3:-19496765 None:intergenic
TGCAGAGACAAGATGGTGAA+GGG 0.612592 4_3:+19496844 Msa0633710:CDS
AATATTTGAAGCATGATTTG+GGG 0.617491 4_3:-19497444 None:intergenic
AGCTCAAGAACAGAATTCAG+TGG 0.618807 4_3:+19495410 Msa0633710:CDS
GTCTACAGGTGCAAAAGAGG+AGG 0.622913 4_3:+19495338 Msa0633710:intron
GATAGTCCTGAGAAGCACAA+TGG 0.625691 4_3:+19496496 Msa0633710:CDS
ACAATCACGACTTCGTGAGT+GGG 0.632953 4_3:+19496886 Msa0633710:CDS
GGATGTTTCAAAACCAGGGG+AGG 0.633132 4_3:+19495532 Msa0633710:CDS
GGAAGTACCTGATCCTGATG+AGG 0.635583 4_3:+19496362 Msa0633710:CDS
GGCGGTGATCAGGTGCGAAG+CGG 0.638045 4_3:-19491981 None:intergenic
AGAAGTTAACAAAGTTAACA+AGG 0.642145 4_3:+19496776 Msa0633710:CDS
AGGATCAGGTACTTCCAAAG+TGG 0.647576 4_3:-19496355 None:intergenic
CTGCATGATCTGGTCCGGCG+CGG 0.652743 4_3:-19491899 None:intergenic
AAAGTAGAAGTTAATAACGA+GGG 0.654655 4_3:-19497933 None:intergenic
ATATCGACATGGACCAGCAG+GGG 0.655262 4_3:-19494649 None:intergenic
GAGAAGTTTGAGGAGATCCA+CGG 0.655684 4_3:+19496720 Msa0633710:CDS
TCATCAAGAAGCTTGTCCTG+AGG 0.669807 4_3:+19497633 Msa0633710:three_prime_UTR
TTTCTAGGTCTTGATTCCGG+CGG 0.678015 4_3:-19491999 None:intergenic
CATATCGGTTATGCTAACAT+CGG 0.684451 4_3:-19497185 None:intergenic
GGTCCCAGAAGATAAAGGGA+AGG 0.692159 4_3:+19496812 Msa0633710:CDS
GAAAGTAGAAGTTAATAACG+AGG 0.702569 4_3:-19497934 None:intergenic
AATGAGCTGTCATATCGACA+TGG 0.710086 4_3:-19494660 None:intergenic
ACTATCCTGTATCTTCTCTG+GGG 0.711189 4_3:-19496479 None:intergenic
ACTTCCAAAGTGGTACCATG+TGG 0.714904 4_3:-19496345 None:intergenic
TAACAAGGATCCATCAACTG+TGG 0.718425 4_3:+19496791 Msa0633710:CDS
ATAGCAATTAAAGCTCCACA+TGG 0.724971 4_3:+19496330 Msa0633710:CDS
GAAGCGGTGATAATCTCCGG+CGG 0.735687 4_3:-19491965 None:intergenic
GAGAAAGGGAGGTTTCATGG+AGG 0.761518 4_3:-19491941 None:intergenic
CGCCTGTATCTGGAAAAGCG+GGG 0.765173 4_3:+19494351 Msa0633710:CDS
TGGATGCAACATCAACACCG+TGG 0.767009 4_3:-19496737 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATTTTTTATATAAATT+TGG + chr4_3:19494599-19494618 Msa0633710:intron 0.0%
!!! TTTTTAACAATATGATATAT+AGG - chr4_3:19495155-19495174 None:intergenic 10.0%
!!! TCTTGTATATAAATTTATTT+TGG + chr4_3:19496264-19496283 Msa0633710:intron 10.0%
!! TAAAATGATTCAATTCAAAA+AGG - chr4_3:19493176-19493195 None:intergenic 15.0%
!!! AAATTTAGTGTTTTCAAAAT+TGG + chr4_3:19493852-19493871 Msa0633710:intron 15.0%
!!! AATTTAGTGTTTTCAAAATT+GGG + chr4_3:19493853-19493872 Msa0633710:intron 15.0%
!! ACAATCAATAGAAAATATTA+TGG - chr4_3:19494206-19494225 None:intergenic 15.0%
!!! ATTTTTTATATAAATTTGGC+AGG + chr4_3:19494603-19494622 Msa0633710:intron 15.0%
!! TCATATTGTTAAAAACAAAT+AGG + chr4_3:19495160-19495179 Msa0633710:intron 15.0%
!! TTTCTGACTTATATAATTTA+TGG + chr4_3:19495746-19495765 Msa0633710:intron 15.0%
!! TATTAAATCCTTATAAATGT+TGG + chr4_3:19495791-19495810 Msa0633710:intron 15.0%
!! AATTGAAAATTTAACAATTG+AGG + chr4_3:19495850-19495869 Msa0633710:CDS 15.0%
!!! TTTTATTTGTTTATTATTGC+AGG + chr4_3:19495973-19495992 Msa0633710:intron 15.0%
!! TTTATTTGTTTATTATTGCA+GGG + chr4_3:19495974-19495993 Msa0633710:intron 15.0%
!!! AATTTATTTTGGATTTTAAC+TGG + chr4_3:19496275-19496294 Msa0633710:intron 15.0%
!! AGGAAATTACAAAAAAATTA+TGG - chr4_3:19497341-19497360 None:intergenic 15.0%
!! AAAAAAAATAGAAAACTCAC+AGG - chr4_3:19492048-19492067 None:intergenic 20.0%
!!! TTGTTTTGTTTTTAGTTTAG+TGG + chr4_3:19492102-19492121 Msa0633710:intron 20.0%
!!! GTATTTAGTTGTTAATTTGT+TGG + chr4_3:19492176-19492195 Msa0633710:intron 20.0%
!! GAGGAAATTTAATTATATTG+AGG + chr4_3:19492285-19492304 Msa0633710:intron 20.0%
!!! GTGATTTTCTTAAATAAGTT+CGG + chr4_3:19492387-19492406 Msa0633710:intron 20.0%
!!! TGATTTTCTTAAATAAGTTC+GGG + chr4_3:19492388-19492407 Msa0633710:intron 20.0%
!! TTTATTTACCAAATTTCGTA+CGG - chr4_3:19493027-19493046 None:intergenic 20.0%
!! AATTTGGTAAATAAAGGAAA+TGG + chr4_3:19493032-19493051 Msa0633710:intron 20.0%
!! ATTTGGTAAATAAAGGAAAT+GGG + chr4_3:19493033-19493052 Msa0633710:intron 20.0%
!!! TATTGTAGAAGTTTTTTATG+CGG + chr4_3:19493077-19493096 Msa0633710:intron 20.0%
!! TTTGCAAAGAATAAGAAAAA+GGG - chr4_3:19493387-19493406 None:intergenic 20.0%
!!! TTTTGCAAAGAATAAGAAAA+AGG - chr4_3:19493388-19493407 None:intergenic 20.0%
!!! ATTGACATAGTTAAAAGTAT+TGG + chr4_3:19493411-19493430 Msa0633710:intron 20.0%
!!! TTGACATAGTTAAAAGTATT+GGG + chr4_3:19493412-19493431 Msa0633710:intron 20.0%
!! AGAAAAAAAGTAAAGAACAA+TGG + chr4_3:19493736-19493755 Msa0633710:intron 20.0%
!!! TCTAATTTTTAATATCAGGA+AGG + chr4_3:19493820-19493839 Msa0633710:intron 20.0%
!!! CTAATTTTTAATATCAGGAA+GGG + chr4_3:19493821-19493840 Msa0633710:intron 20.0%
!!! GATGTATTTTAGTCTTTTAT+AGG - chr4_3:19493944-19493963 None:intergenic 20.0%
!! GGCTTAAAAAAATGATTATA+TGG - chr4_3:19494150-19494169 None:intergenic 20.0%
!!! ATAATCATTTTTTTAAGCCA+CGG + chr4_3:19494151-19494170 Msa0633710:intron 20.0%
!!! TTTTCGAAACTTTGTTAAAT+AGG + chr4_3:19494454-19494473 Msa0633710:intron 20.0%
!!! TTTCCTTTAATTATCGATTT+TGG + chr4_3:19494565-19494584 Msa0633710:intron 20.0%
!!! TTCCTTTAATTATCGATTTT+GGG + chr4_3:19494566-19494585 Msa0633710:intron 20.0%
!! CTAATCAAAACTGAAAAATT+AGG - chr4_3:19494694-19494713 None:intergenic 20.0%
!! ATTAGTTAATTGTTGATCAT+CGG + chr4_3:19494709-19494728 Msa0633710:intron 20.0%
!! CAAATTATATTTAGTTAGGA+GGG - chr4_3:19494926-19494945 None:intergenic 20.0%
!!! TTTAAGTTGAACTAATGTTT+AGG + chr4_3:19495001-19495020 Msa0633710:intron 20.0%
!!! TTAAGTTGAACTAATGTTTA+GGG + chr4_3:19495002-19495021 Msa0633710:intron 20.0%
!! ATATTACAAATGTTCTTGAA+GGG + chr4_3:19495368-19495387 Msa0633710:CDS 20.0%
!!! CAACATTTTGGATAAAATTA+TGG - chr4_3:19495471-19495490 None:intergenic 20.0%
!! TAAACTAGAAAAACTATCAT+CGG - chr4_3:19495558-19495577 None:intergenic 20.0%
!!! AAGGATGAATTTTTTATCTT+TGG + chr4_3:19495587-19495606 Msa0633710:intron 20.0%
!! ATAAAATGATTTACAGATCA+GGG - chr4_3:19495672-19495691 None:intergenic 20.0%
!!! GTAAAGCATACTTTTTTATT+TGG + chr4_3:19495704-19495723 Msa0633710:intron 20.0%
!!! TTTTTCCTAAATCCATATTT+TGG + chr4_3:19496056-19496075 Msa0633710:intron 20.0%
!! AAATTATGAACATCTAAGTA+CGG - chr4_3:19496090-19496109 None:intergenic 20.0%
!! TTCATTGTAATTCATAGATA+GGG - chr4_3:19496212-19496231 None:intergenic 20.0%
!! ATTCATTGTAATTCATAGAT+AGG - chr4_3:19496213-19496232 None:intergenic 20.0%
!!! TTACAATGAATATTTTGATG+TGG + chr4_3:19496222-19496241 Msa0633710:intron 20.0%
!! AATTTATATACAAGAAGCAA+AGG - chr4_3:19496259-19496278 None:intergenic 20.0%
!!! TTTTGTATTTGCAATTTGTT+AGG + chr4_3:19496972-19496991 Msa0633710:intron 20.0%
!!! TTGCATGTTTTTTGTTTTAA+AGG + chr4_3:19497064-19497083 Msa0633710:intron 20.0%
!! TAGGGATCTATTGAATTTTA+GGG + chr4_3:19492145-19492164 Msa0633710:intron 25.0%
! CTTAGAGTTGAATATTAGTT+AGG + chr4_3:19492219-19492238 Msa0633710:intron 25.0%
!! TAGTTAGGTTTTACTAAAAG+AGG + chr4_3:19492234-19492253 Msa0633710:intron 25.0%
!! ATAAACCATTTTATCCAAAC+AGG - chr4_3:19492530-19492549 None:intergenic 25.0%
!!! CAATTTTCACAAGCTTTTTT+CGG - chr4_3:19492655-19492674 None:intergenic 25.0%
! CATGTTGCAATGAAAATAAT+TGG + chr4_3:19492850-19492869 Msa0633710:intron 25.0%
!! GAAAATAATTGGTCTATTCT+AGG + chr4_3:19492861-19492880 Msa0633710:intron 25.0%
! TATATTGCAAGGAAAAGAAT+TGG + chr4_3:19492894-19492913 Msa0633710:intron 25.0%
! AGTAAGCTCATAAACTAAAT+GGG - chr4_3:19492953-19492972 None:intergenic 25.0%
! AAGTAAGCTCATAAACTAAA+TGG - chr4_3:19492954-19492973 None:intergenic 25.0%
! GTACGAAATTTGGTAAATAA+AGG + chr4_3:19493026-19493045 Msa0633710:intron 25.0%
! TTCCTAAAAACGTATGTATT+TGG - chr4_3:19493224-19493243 None:intergenic 25.0%
! AATCATTATCTTACTCGTTA+AGG + chr4_3:19493266-19493285 Msa0633710:intron 25.0%
! ATTTCTCATAAATGCAAGTA+GGG + chr4_3:19493356-19493375 Msa0633710:intron 25.0%
! GTTGTGAAGCTATATATTTA+TGG + chr4_3:19493489-19493508 Msa0633710:intron 25.0%
!!! GTTCTTTACTTTTTTTCTGT+CGG - chr4_3:19493734-19493753 None:intergenic 25.0%
!! GAAGAAAGTATAAACAAGAA+AGG + chr4_3:19493770-19493789 Msa0633710:intron 25.0%
!! GCTGTCTAATTTTTAATATC+AGG + chr4_3:19493816-19493835 Msa0633710:intron 25.0%
!! TCTTTTATAGGTAGAAAAGA+GGG - chr4_3:19493932-19493951 None:intergenic 25.0%
! ATCGATAATTAAAGGAAAGA+TGG - chr4_3:19494563-19494582 None:intergenic 25.0%
! TACCCAAAATCGATAATTAA+AGG - chr4_3:19494571-19494590 None:intergenic 25.0%
! CCAAATTATATTTAGTTAGG+AGG - chr4_3:19494927-19494946 None:intergenic 25.0%
! CCTCCTAACTAAATATAATT+TGG + chr4_3:19494924-19494943 Msa0633710:intron 25.0%
! CCACCAAATTATATTTAGTT+AGG - chr4_3:19494930-19494949 None:intergenic 25.0%
! CCTAACTAAATATAATTTGG+TGG + chr4_3:19494927-19494946 Msa0633710:intron 25.0%
!! TAAGTTGAACTAATGTTTAG+GGG + chr4_3:19495003-19495022 Msa0633710:intron 25.0%
! CAGCAAAACATTTAAAGAAA+GGG - chr4_3:19495102-19495121 None:intergenic 25.0%
! GATATTACAAATGTTCTTGA+AGG + chr4_3:19495367-19495386 Msa0633710:CDS 25.0%
!!! TCTTGAGCTTTTTTTCTATA+AGG - chr4_3:19495399-19495418 None:intergenic 25.0%
!!! GTAAAAGTGTTTCAACATTT+TGG - chr4_3:19495483-19495502 None:intergenic 25.0%
!!! TGATAGTTTTTCTAGTTTAC+AGG + chr4_3:19495559-19495578 Msa0633710:CDS 25.0%
!! TCTTTAAAAGTTAGAAAGAC+TGG + chr4_3:19495630-19495649 Msa0633710:intron 25.0%
! CATAAAATGATTTACAGATC+AGG - chr4_3:19495673-19495692 None:intergenic 25.0%
! ATGGCATATAATAGATTTGA+TGG + chr4_3:19495765-19495784 Msa0633710:intron 25.0%
! ATCAAACACCAACATTTATA+AGG - chr4_3:19495802-19495821 None:intergenic 25.0%
! ATAAACTCTTAATAGACAAC+AGG - chr4_3:19495954-19495973 None:intergenic 25.0%
! AATGACCAAAATATGGATTT+AGG - chr4_3:19496064-19496083 None:intergenic 25.0%
! TAACAAGGTAAACATCTATT+GGG - chr4_3:19496523-19496542 None:intergenic 25.0%
!! TTAGGTATGCTTAATGTTTT+TGG + chr4_3:19496540-19496559 Msa0633710:intron 25.0%
!! TAGGTATGCTTAATGTTTTT+GGG + chr4_3:19496541-19496560 Msa0633710:intron 25.0%
! TTGTTAACTTTGTTAACTTC+TGG - chr4_3:19496777-19496796 None:intergenic 25.0%
! AGAAGTTAACAAAGTTAACA+AGG + chr4_3:19496776-19496795 Msa0633710:CDS 25.0%
! TACAAAAAACAAATATCCCA+CGG - chr4_3:19496959-19496978 None:intergenic 25.0%
! TTCTGATAAGAAAAAAACCT+TGG + chr4_3:19497099-19497118 Msa0633710:intron 25.0%
! ACTTCAAGAAGAATATTGTA+TGG + chr4_3:19497403-19497422 Msa0633710:CDS 25.0%
!! AATATTTGAAGCATGATTTG+GGG - chr4_3:19497447-19497466 None:intergenic 25.0%
!! CAATATTTGAAGCATGATTT+GGG - chr4_3:19497448-19497467 None:intergenic 25.0%
!! GTTCAAAATAAATCCTTTTG+AGG - chr4_3:19497511-19497530 None:intergenic 25.0%
! CCATAACAATATACAAAGTT+GGG - chr4_3:19497757-19497776 None:intergenic 25.0%
! ACCATAACAATATACAAAGT+TGG - chr4_3:19497758-19497777 None:intergenic 25.0%
! AACTTTGTATATTGTTATGG+TGG + chr4_3:19497757-19497776 Msa0633710:three_prime_UTR 25.0%
! ACTTTGTATATTGTTATGGT+GGG + chr4_3:19497758-19497777 Msa0633710:three_prime_UTR 25.0%
! AAGTTTCATATGACATTCTA+TGG + chr4_3:19497892-19497911 Msa0633710:three_prime_UTR 25.0%
! AAAGTAGAAGTTAATAACGA+GGG - chr4_3:19497936-19497955 None:intergenic 25.0%
AGAAGAAGATGATATGATGA+TGG - chr4_3:19491738-19491757 None:intergenic 30.0%
TATGTATGTGTTTGGAAAGT+GGG - chr4_3:19491796-19491815 None:intergenic 30.0%
!!! GTTTTTAGTTTAGTGGTGTA+AGG + chr4_3:19492109-19492128 Msa0633710:intron 30.0%
TAAGGTGATTTAAGGAACTA+GGG + chr4_3:19492127-19492146 Msa0633710:intron 30.0%
! CTAGGGATCTATTGAATTTT+AGG + chr4_3:19492144-19492163 Msa0633710:intron 30.0%
! TTAATAGATGAAGAGTGTGT+GGG + chr4_3:19492452-19492471 Msa0633710:intron 30.0%
TGTTCAGTTATATGAGCTTT+AGG + chr4_3:19492503-19492522 Msa0633710:intron 30.0%
GTTCAGTTATATGAGCTTTA+GGG + chr4_3:19492504-19492523 Msa0633710:intron 30.0%
AATGGTTTATTTGCAGCTTA+TGG + chr4_3:19492540-19492559 Msa0633710:intron 30.0%
!!! TAAGTTTTGTGAGAGTGTTT+GGG - chr4_3:19492702-19492721 None:intergenic 30.0%
!!! ATAAGTTTTGTGAGAGTGTT+TGG - chr4_3:19492703-19492722 None:intergenic 30.0%
GTACTAAACCTAAAGACTAA+GGG - chr4_3:19492763-19492782 None:intergenic 30.0%
AGTACTAAACCTAAAGACTA+AGG - chr4_3:19492764-19492783 None:intergenic 30.0%
AGTACTTGATCAATGTATTG+AGG + chr4_3:19492778-19492797 Msa0633710:intron 30.0%
! AATAATTGGTCTATTCTAGG+TGG + chr4_3:19492864-19492883 Msa0633710:intron 30.0%
AAGGAAAAGAATTGGTGTAT+TGG + chr4_3:19492902-19492921 Msa0633710:intron 30.0%
GTAAGCTCATAAACTAAATG+GGG - chr4_3:19492952-19492971 None:intergenic 30.0%
AACCTCATTTAAAAACAACC+AGG - chr4_3:19492983-19493002 None:intergenic 30.0%
! TTTTAAATGAGGTTTCTGTC+TGG + chr4_3:19492989-19493008 Msa0633710:intron 30.0%
ACTAAAATACTAACGAAACG+CGG - chr4_3:19493128-19493147 None:intergenic 30.0%
! TGCCAAATACATACGTTTTT+AGG + chr4_3:19493219-19493238 Msa0633710:intron 30.0%
ATGATTGAATGACTCATTTG+CGG - chr4_3:19493252-19493271 None:intergenic 30.0%
CTACTTGCATTTATGAGAAA+TGG - chr4_3:19493357-19493376 None:intergenic 30.0%
CATTTCTCATAAATGCAAGT+AGG + chr4_3:19493355-19493374 Msa0633710:intron 30.0%
!! TGAATTGTGGCTTTGTAATA+CGG + chr4_3:19493537-19493556 Msa0633710:intron 30.0%
!! GTAAAGAACAATGGATTAGA+AGG + chr4_3:19493745-19493764 Msa0633710:intron 30.0%
! GAAAGTATAAACAAGAAAGG+AGG + chr4_3:19493773-19493792 Msa0633710:intron 30.0%
! CTTTTATAGGTAGAAAAGAG+GGG - chr4_3:19493931-19493950 None:intergenic 30.0%
! GTCTTTTATAGGTAGAAAAG+AGG - chr4_3:19493933-19493952 None:intergenic 30.0%
TAAATCAACGTTGTTGATCT+CGG - chr4_3:19494078-19494097 None:intergenic 30.0%
!! AGATCAACAACGTTGATTTA+TGG + chr4_3:19494078-19494097 Msa0633710:intron 30.0%
ATACATTTCAGCAATTGAAG+CGG + chr4_3:19494243-19494262 Msa0633710:intron 30.0%
GCAATGTGTAAAGTAAACAA+TGG - chr4_3:19494904-19494923 None:intergenic 30.0%
! ACTAAATATAATTTGGTGGC+AGG + chr4_3:19494931-19494950 Msa0633710:intron 30.0%
AAGTTGAACTAATGTTTAGG+GGG + chr4_3:19495004-19495023 Msa0633710:intron 30.0%
CCAGCAAAACATTTAAAGAA+AGG - chr4_3:19495103-19495122 None:intergenic 30.0%
! CCTTTCTTTAAATGTTTTGC+TGG + chr4_3:19495100-19495119 Msa0633710:intron 30.0%
TTAATAAAACAAGCAGAGGA+TGG + chr4_3:19495208-19495227 Msa0633710:CDS 30.0%
TGGTCAATTATCAAAGGAAT+TGG - chr4_3:19495505-19495524 None:intergenic 30.0%
! AATTCCTTTGATAATTGACC+AGG + chr4_3:19495504-19495523 Msa0633710:intron 30.0%
! ATTCCTTTGATAATTGACCA+GGG + chr4_3:19495505-19495524 Msa0633710:intron 30.0%
!!! GTTTTTCTAGTTTACAGGTT+AGG + chr4_3:19495564-19495583 Msa0633710:intron 30.0%
TTGGATGAACAAATAAGGTT+TGG + chr4_3:19495881-19495900 Msa0633710:intron 30.0%
TGGATGAACAAATAAGGTTT+GGG + chr4_3:19495882-19495901 Msa0633710:intron 30.0%
TAATCTCTTTCCACTCTTAA+AGG + chr4_3:19496130-19496149 Msa0633710:intron 30.0%
! CAAAAAGAATCCTTTAAGAG+TGG - chr4_3:19496143-19496162 None:intergenic 30.0%
CTAACAAGGTAAACATCTAT+TGG - chr4_3:19496524-19496543 None:intergenic 30.0%
CAATAGATGTTTACCTTGTT+AGG + chr4_3:19496522-19496541 Msa0633710:CDS 30.0%
AACATTAAGCATACCTAACA+AGG - chr4_3:19496538-19496557 None:intergenic 30.0%
! TTTTGCTAACATTTGCTTCA+AGG + chr4_3:19496566-19496585 Msa0633710:intron 30.0%
TTTGCTAACATTTGCTTCAA+GGG + chr4_3:19496567-19496586 Msa0633710:intron 30.0%
TCTCTTCAAATTGACTACAA+TGG - chr4_3:19496704-19496723 None:intergenic 30.0%
TCAATTTGAAGAGAAGTTTG+AGG + chr4_3:19496710-19496729 Msa0633710:CDS 30.0%
ACAATTTCAAATTAGCTCCA+AGG - chr4_3:19497119-19497138 None:intergenic 30.0%
AATGAATGAAATGGAGACTA+AGG - chr4_3:19497240-19497259 None:intergenic 30.0%
TGTGTGTGTAATGAATGAAA+TGG - chr4_3:19497249-19497268 None:intergenic 30.0%
TTCCTTGATATATTTACAGC+TGG + chr4_3:19497356-19497375 Msa0633710:intron 30.0%
TCCTTGATATATTTACAGCT+GGG + chr4_3:19497357-19497376 Msa0633710:intron 30.0%
! CCAATATTTGAAGCATGATT+TGG - chr4_3:19497449-19497468 None:intergenic 30.0%
CCAAATCATGCTTCAAATAT+TGG + chr4_3:19497446-19497465 Msa0633710:CDS 30.0%
CCCAACTTTGTATATTGTTA+TGG + chr4_3:19497754-19497773 Msa0633710:three_prime_UTR 30.0%
CTTTGTATATTGTTATGGTG+GGG + chr4_3:19497759-19497778 Msa0633710:three_prime_UTR 30.0%
GAAAGTAGAAGTTAATAACG+AGG - chr4_3:19497937-19497956 None:intergenic 30.0%
!! ATTTGGTTCGGATATTGATG+TGG - chr4_3:19491710-19491729 None:intergenic 35.0%
!! ATATGATGATGGAGGGAATT+TGG - chr4_3:19491727-19491746 None:intergenic 35.0%
!! GAAGATGATATGATGATGGA+GGG - chr4_3:19491734-19491753 None:intergenic 35.0%
!! AGAAGATGATATGATGATGG+AGG - chr4_3:19491735-19491754 None:intergenic 35.0%
CTATGTATGTGTTTGGAAAG+TGG - chr4_3:19491797-19491816 None:intergenic 35.0%
GAGAGATCTATGTATGTGTT+TGG - chr4_3:19491804-19491823 None:intergenic 35.0%
TAGTGGTGTAAGGTGATTTA+AGG + chr4_3:19492119-19492138 Msa0633710:intron 35.0%
GTAAGGTGATTTAAGGAACT+AGG + chr4_3:19492126-19492145 Msa0633710:intron 35.0%
CTCTTCAAATTTAGTGCTTG+AGG + chr4_3:19492266-19492285 Msa0633710:intron 35.0%
! CTTAATAGATGAAGAGTGTG+TGG + chr4_3:19492451-19492470 Msa0633710:intron 35.0%
TCAAATAAGCCAATCCAAAC+TGG + chr4_3:19492737-19492756 Msa0633710:intron 35.0%
AATGTATTGAGGAACTTGAG+AGG + chr4_3:19492789-19492808 Msa0633710:intron 35.0%
ATTGTAAGCTGGTCAATTCT+AGG + chr4_3:19492817-19492836 Msa0633710:intron 35.0%
GTGGAAAGGATTATATTGCA+AGG + chr4_3:19492883-19492902 Msa0633710:intron 35.0%
! TAAACTAAATGGGGCTTTTC+AGG - chr4_3:19492943-19492962 None:intergenic 35.0%
!!! TGCCTGGTTGTTTTTAAATG+AGG + chr4_3:19492978-19492997 Msa0633710:intron 35.0%
! GAGATTTTCCGTACGAAATT+TGG + chr4_3:19493016-19493035 Msa0633710:intron 35.0%
TGCCTCATTACATTGAATTG+TGG + chr4_3:19493524-19493543 Msa0633710:intron 35.0%
AGCCACAATTCAATGTAATG+AGG - chr4_3:19493529-19493548 None:intergenic 35.0%
AGGAAAAGAAACTGCAATGT+GGG + chr4_3:19493793-19493812 Msa0633710:intron 35.0%
TAGGAAAACAAAAAGGAGTG+TGG - chr4_3:19493902-19493921 None:intergenic 35.0%
CGCTATTAAAAAGAGGAGAA+GGG - chr4_3:19493993-19494012 None:intergenic 35.0%
! CCTTCTCCTCTTTTTAATAG+CGG + chr4_3:19493991-19494010 Msa0633710:intron 35.0%
ATGACAAAAAGCAACAGAAC+TGG + chr4_3:19494395-19494414 Msa0633710:CDS 35.0%
ATTCACCAATATTTGAGCCA+GGG - chr4_3:19494430-19494449 None:intergenic 35.0%
TATTCACCAATATTTGAGCC+AGG - chr4_3:19494431-19494450 None:intergenic 35.0%
AGTTAATTGTTGATCATCGG+TGG + chr4_3:19494712-19494731 Msa0633710:intron 35.0%
TGGTGGAGGTTATTTGAAAA+CGG - chr4_3:19494796-19494815 None:intergenic 35.0%
TGTCATGAAAAAAAGGTTGG+TGG - chr4_3:19494813-19494832 None:intergenic 35.0%
CTGTGTCATGAAAAAAAGGT+TGG - chr4_3:19494816-19494835 None:intergenic 35.0%
GTGTCTGTGTCATGAAAAAA+AGG - chr4_3:19494820-19494839 None:intergenic 35.0%
TCAACTTAAACCAGAGTTGA+GGG - chr4_3:19494850-19494869 None:intergenic 35.0%
TTCAACTTAAACCAGAGTTG+AGG - chr4_3:19494851-19494870 None:intergenic 35.0%
AGTTGAACTAATGTTTAGGG+GGG + chr4_3:19495005-19495024 Msa0633710:intron 35.0%
TAATGTTTAGGGGGGTTAAA+TGG + chr4_3:19495013-19495032 Msa0633710:intron 35.0%
AATGGCTAAAACAGGTTAAG+TGG + chr4_3:19495031-19495050 Msa0633710:intron 35.0%
ATGGCTAAAACAGGTTAAGT+GGG + chr4_3:19495032-19495051 Msa0633710:intron 35.0%
TCCGAAATGTGTGAAAGTAA+CGG + chr4_3:19495059-19495078 Msa0633710:intron 35.0%
CGAGTTAATAAAACAAGCAG+AGG + chr4_3:19495204-19495223 Msa0633710:CDS 35.0%
AAAGATTCCTTGCTCATTAC+TGG + chr4_3:19495288-19495307 Msa0633710:intron 35.0%
AAACATTCCAGTAATGAGCA+AGG - chr4_3:19495298-19495317 None:intergenic 35.0%
ACAAATGTTCTTGAAGGGAT+TGG + chr4_3:19495373-19495392 Msa0633710:CDS 35.0%
! TTCCTTTGATAATTGACCAG+GGG + chr4_3:19495506-19495525 Msa0633710:intron 35.0%
!! TTCTAGTTTACAGGTTAGGA+AGG + chr4_3:19495568-19495587 Msa0633710:intron 35.0%
!! TGTTTTTGTTTCCCATATGC+AGG + chr4_3:19495823-19495842 Msa0633710:intron 35.0%
ATTTAACAATTGAGGAACGC+CGG + chr4_3:19495858-19495877 Msa0633710:CDS 35.0%
! ACCTTATTTGTTCATCCAAC+CGG - chr4_3:19495880-19495899 None:intergenic 35.0%
CAACAAAGAAGAATCAGCAA+AGG - chr4_3:19495914-19495933 None:intergenic 35.0%
ACGGCTAAATGACCAAAATA+TGG - chr4_3:19496071-19496090 None:intergenic 35.0%
! AAGGATTCTTTTTGTCACTG+AGG + chr4_3:19496149-19496168 Msa0633710:intron 35.0%
TTGCTATCAAGGTTTCATTC+TGG - chr4_3:19496317-19496336 None:intergenic 35.0%
! TGGAGCTTTAATTGCTATCA+AGG - chr4_3:19496328-19496347 None:intergenic 35.0%
ATAGCAATTAAAGCTCCACA+TGG + chr4_3:19496330-19496349 Msa0633710:CDS 35.0%
TAAATTACCTCATCAGGATC+AGG - chr4_3:19496372-19496391 None:intergenic 35.0%
TCCTGATGAGGTAATTTAAG+AGG + chr4_3:19496374-19496393 Msa0633710:intron 35.0%
TCCTCTTAAATTACCTCATC+AGG - chr4_3:19496378-19496397 None:intergenic 35.0%
! CAAATTCCCTTTTTCCTGTT+AGG + chr4_3:19496445-19496464 Msa0633710:intron 35.0%
GGGTCATTTAGCTATTACAA+TGG + chr4_3:19496587-19496606 Msa0633710:intron 35.0%
ACTTTGTTAACTTCTGGACT+GGG - chr4_3:19496771-19496790 None:intergenic 35.0%
AACTTTGTTAACTTCTGGAC+TGG - chr4_3:19496772-19496791 None:intergenic 35.0%
TTTCCTTCCCTTTATCTTCT+GGG - chr4_3:19496818-19496837 None:intergenic 35.0%
ATTTCCTTCCCTTTATCTTC+TGG - chr4_3:19496819-19496838 None:intergenic 35.0%
!! TTGTTGGTAACATCTGTACT+AGG - chr4_3:19496870-19496889 None:intergenic 35.0%
! AGATAACACGCTTCAGATTT+TGG - chr4_3:19497026-19497045 None:intergenic 35.0%
! CATATCGGTTATGCTAACAT+CGG - chr4_3:19497188-19497207 None:intergenic 35.0%
ATGTTAGCATAACCGATATG+TGG + chr4_3:19497188-19497207 Msa0633710:CDS 35.0%
CCTTGATATATTTACAGCTG+GGG + chr4_3:19497358-19497377 Msa0633710:intron 35.0%
TGTACAATTAGCCATTTGAC+TGG - chr4_3:19497669-19497688 None:intergenic 35.0%
! TCTAGAAGTACAAAGTCACT+TGG - chr4_3:19497708-19497727 None:intergenic 35.0%
AAGTGACTTTGTACTTCTAG+AGG + chr4_3:19497707-19497726 Msa0633710:three_prime_UTR 35.0%
AGTGACTTTGTACTTCTAGA+GGG + chr4_3:19497708-19497727 Msa0633710:three_prime_UTR 35.0%
TACAAAGTTGGGTTCACAAA+AGG - chr4_3:19497746-19497765 None:intergenic 35.0%
! ATGATGGAGGGAATTTGGTT+CGG - chr4_3:19491722-19491741 None:intergenic 40.0%
TTTGGAAAGTGGGAAAAAGC+GGG - chr4_3:19491786-19491805 None:intergenic 40.0%
GTTTGGAAAGTGGGAAAAAG+CGG - chr4_3:19491787-19491806 None:intergenic 40.0%
! CAGTTTCTAGGTCTTGATTC+CGG - chr4_3:19492005-19492024 None:intergenic 40.0%
CAACGATAGCTTCAGTTTCT+AGG - chr4_3:19492017-19492036 None:intergenic 40.0%
TAGGGCCTGTTTGGATAAAA+TGG + chr4_3:19492522-19492541 Msa0633710:intron 40.0%
GAGAGGATGTAATTGTAAGC+TGG + chr4_3:19492806-19492825 Msa0633710:intron 40.0%
TTGGTCTATTCTAGGTGGAA+AGG + chr4_3:19492869-19492888 Msa0633710:intron 40.0%
!!! GGCTTTTCAGGAGCATTTTA+AGG - chr4_3:19492931-19492950 None:intergenic 40.0%
! ATGAGCTTACTTCTTTTGCC+TGG + chr4_3:19492962-19492981 Msa0633710:intron 40.0%
!! AGGAAATGGGTTACCATACT+TGG + chr4_3:19493046-19493065 Msa0633710:intron 40.0%
GAAATCAAGTGTGGTGTTTG+CGG + chr4_3:19493599-19493618 Msa0633710:intron 40.0%
AATTCATGGCCAGAGTGAAT+GGG - chr4_3:19493670-19493689 None:intergenic 40.0%
GGCAAGAAACTTCCAATTCA+TGG - chr4_3:19493684-19493703 None:intergenic 40.0%
TACTGAAAAACACCAGCTCA+TGG - chr4_3:19493705-19493724 None:intergenic 40.0%
GAGGAAAAGAAACTGCAATG+TGG + chr4_3:19493792-19493811 Msa0633710:intron 40.0%
GGAAAAGAAACTGCAATGTG+GGG + chr4_3:19493794-19493813 Msa0633710:intron 40.0%
GCGTAGGTAGGAAAACAAAA+AGG - chr4_3:19493909-19493928 None:intergenic 40.0%
AGGGGTAAAAGAAGTGAGAT+CGG - chr4_3:19493966-19493985 None:intergenic 40.0%
AAAAGAGGAGAAGGGAAAGA+GGG - chr4_3:19493985-19494004 None:intergenic 40.0%
AAAAAGAGGAGAAGGGAAAG+AGG - chr4_3:19493986-19494005 None:intergenic 40.0%
CCGCTATTAAAAAGAGGAGA+AGG - chr4_3:19493994-19494013 None:intergenic 40.0%
GGATAGCCGCTATTAAAAAG+AGG - chr4_3:19494000-19494019 None:intergenic 40.0%
CACTATCCCAGTTGTACAAT+CGG + chr4_3:19494035-19494054 Msa0633710:intron 40.0%
!! TATTATGGATTAGTCTCCGC+AGG - chr4_3:19494191-19494210 None:intergenic 40.0%
!!! GCTGATTTTGAAGCTGATTC+AGG + chr4_3:19494278-19494297 Msa0633710:CDS 40.0%
! TTGAAGCTGATTCAGGTGAT+AGG + chr4_3:19494285-19494304 Msa0633710:CDS 40.0%
!!! GTTGCTTTTTGTCATCCTAG+AGG - chr4_3:19494390-19494409 None:intergenic 40.0%
TTCACCAATATTTGAGCCAG+GGG - chr4_3:19494429-19494448 None:intergenic 40.0%
AATGAGCTGTCATATCGACA+TGG - chr4_3:19494663-19494682 None:intergenic 40.0%
TGTCGATATGACAGCTCATT+AGG + chr4_3:19494663-19494682 Msa0633710:CDS 40.0%
GGTGGAGGTTATTTGAAAAC+GGG - chr4_3:19494795-19494814 None:intergenic 40.0%
!! CATGAAAAAAAGGTTGGTGG+AGG - chr4_3:19494810-19494829 None:intergenic 40.0%
! CCCGTTACTTTCACACATTT+CGG - chr4_3:19495063-19495082 None:intergenic 40.0%
CCGAAATGTGTGAAAGTAAC+GGG + chr4_3:19495060-19495079 Msa0633710:intron 40.0%
CGAAATGTGTGAAAGTAACG+GGG + chr4_3:19495061-19495080 Msa0633710:intron 40.0%
GAAATGTGTGAAAGTAACGG+GGG + chr4_3:19495062-19495081 Msa0633710:intron 40.0%
TGCTGGTGAGTAAAGTTTGA+AGG + chr4_3:19495117-19495136 Msa0633710:intron 40.0%
TAATGCTGCTGACACATTAG+AGG + chr4_3:19495246-19495265 Msa0633710:CDS 40.0%
TGAGCAAGGAATCTTTAGAC+AGG - chr4_3:19495284-19495303 None:intergenic 40.0%
TTCATGAAGCTTGTGTCTAC+AGG + chr4_3:19495324-19495343 Msa0633710:intron 40.0%
AGCTCAAGAACAGAATTCAG+TGG + chr4_3:19495410-19495429 Msa0633710:CDS 40.0%
AGAACAGAATTCAGTGGAAG+TGG + chr4_3:19495416-19495435 Msa0633710:intron 40.0%
GAACAGAATTCAGTGGAAGT+GGG + chr4_3:19495417-19495436 Msa0633710:intron 40.0%
! TCCTTTGATAATTGACCAGG+GGG + chr4_3:19495507-19495526 Msa0633710:intron 40.0%
!! TTTTGTTTCCCATATGCAGG+CGG + chr4_3:19495826-19495845 Msa0633710:intron 40.0%
TTCAATTTCCGCCTGCATAT+GGG - chr4_3:19495837-19495856 None:intergenic 40.0%
TTTCAATTTCCGCCTGCATA+TGG - chr4_3:19495838-19495857 None:intergenic 40.0%
GGGATATGCAAGAAAGACTA+CGG + chr4_3:19495994-19496013 Msa0633710:intron 40.0%
CATAGATAGGGAAACTAACC+TGG - chr4_3:19496200-19496219 None:intergenic 40.0%
CAAGGTTTCATTCTGGCAAT+AGG - chr4_3:19496310-19496329 None:intergenic 40.0%
CAACAGCCTAACAGGAAAAA+GGG - chr4_3:19496454-19496473 None:intergenic 40.0%
TCAACAGCCTAACAGGAAAA+AGG - chr4_3:19496455-19496474 None:intergenic 40.0%
ATTATCCCCAGAGAAGATAC+AGG + chr4_3:19496474-19496493 Msa0633710:CDS 40.0%
ACTATCCTGTATCTTCTCTG+GGG - chr4_3:19496482-19496501 None:intergenic 40.0%
GACTATCCTGTATCTTCTCT+GGG - chr4_3:19496483-19496502 None:intergenic 40.0%
! ATAGTCCTGAGAAGCACAAT+GGG + chr4_3:19496497-19496516 Msa0633710:CDS 40.0%
TCAAGCATCATCGCTTCATA+TGG - chr4_3:19496630-19496649 None:intergenic 40.0%
GACTACAATGGCAGTGAAAA+GGG - chr4_3:19496692-19496711 None:intergenic 40.0%
TGACTACAATGGCAGTGAAA+AGG - chr4_3:19496693-19496712 None:intergenic 40.0%
TAACAAGGATCCATCAACTG+TGG + chr4_3:19496791-19496810 Msa0633710:CDS 40.0%
! ATAGAAGTGCAGAGACAAGA+TGG + chr4_3:19496837-19496856 Msa0633710:CDS 40.0%
ATGCTTACAGCAACATCTGA+AGG - chr4_3:19496927-19496946 None:intergenic 40.0%
!! CTTCAGATTTTGGTACTCTG+TGG - chr4_3:19497016-19497035 None:intergenic 40.0%
ACGTTCTGTTCTCCACATAT+CGG - chr4_3:19497203-19497222 None:intergenic 40.0%
CCCCAGCTGTAAATATATCA+AGG - chr4_3:19497361-19497380 None:intergenic 40.0%
TATTTACAGCTGGGGTAGAA+TGG + chr4_3:19497366-19497385 Msa0633710:intron 40.0%
! ACAGTAGTGTTGGATGTAGA+AGG - chr4_3:19497479-19497498 None:intergenic 40.0%
TCTACATCCAACACTACTGT+AGG + chr4_3:19497479-19497498 Msa0633710:CDS 40.0%
AAGAACGCAACTTTCTCTTC+AGG - chr4_3:19497533-19497552 None:intergenic 40.0%
GCGCGATGTATATGTTTGAA+AGG + chr4_3:19497798-19497817 Msa0633710:three_prime_UTR 40.0%
TGAAGTAGAATTTCGCTCTC+AGG + chr4_3:19497849-19497868 Msa0633710:three_prime_UTR 40.0%
GGTTCGGATATTGATGTGGA+GGG - chr4_3:19491706-19491725 None:intergenic 45.0%
! TGGTTCGGATATTGATGTGG+AGG - chr4_3:19491707-19491726 None:intergenic 45.0%
GAAAAAGCGGGAGAGAGAAA+GGG - chr4_3:19491774-19491793 None:intergenic 45.0%
GAGGTTTCATGGAGGAGAAA+GGG - chr4_3:19491936-19491955 None:intergenic 45.0%
TTTCTAGGTCTTGATTCCGG+CGG - chr4_3:19492002-19492021 None:intergenic 45.0%
!! TATGAGCTTTAGGGCCTGTT+TGG + chr4_3:19492513-19492532 Msa0633710:intron 45.0%
CTAAAGACTAAGGGCCAGTT+TGG - chr4_3:19492754-19492773 None:intergenic 45.0%
! CAAACTGGCCCTTAGTCTTT+AGG + chr4_3:19492752-19492771 Msa0633710:intron 45.0%
GTAAGCTGGTCAATTCTAGG+TGG + chr4_3:19492820-19492839 Msa0633710:intron 45.0%
GGTTACCATACTTGGTCGAA+GGG + chr4_3:19493054-19493073 Msa0633710:intron 45.0%
CAATACCCTTCGACCAAGTA+TGG - chr4_3:19493062-19493081 None:intergenic 45.0%
!! TTGTGGCTTTGTAATACGGC+TGG + chr4_3:19493541-19493560 Msa0633710:intron 45.0%
GACGCTAAATGCAAATGCAG+CGG + chr4_3:19493577-19493596 Msa0633710:intron 45.0%
AATGCAGCGGAAATCAAGTG+TGG + chr4_3:19493590-19493609 Msa0633710:intron 45.0%
! GTGCAGTAAGACCCTTGTTT+CGG - chr4_3:19493644-19493663 None:intergenic 45.0%
CAATTCATGGCCAGAGTGAA+TGG - chr4_3:19493671-19493690 None:intergenic 45.0%
CATTCACTCTGGCCATGAAT+TGG + chr4_3:19493669-19493688 Msa0633710:intron 45.0%
AAAGAGGAGAAGGGAAAGAG+GGG - chr4_3:19493984-19494003 None:intergenic 45.0%
GAGCAACCGATTGTACAACT+GGG - chr4_3:19494044-19494063 None:intergenic 45.0%
AGAGCAACCGATTGTACAAC+TGG - chr4_3:19494045-19494064 None:intergenic 45.0%
AGGCGTCTGAACAGAACTAT+TGG - chr4_3:19494336-19494355 None:intergenic 45.0%
CAAACCCCTGGCTCAAATAT+TGG + chr4_3:19494422-19494441 Msa0633710:CDS 45.0%
AATTTGGCAGGTTCTCCTTC+AGG + chr4_3:19494615-19494634 Msa0633710:intron 45.0%
GGGGTGAGATTATTTCCTGA+AGG - chr4_3:19494633-19494652 None:intergenic 45.0%
ACTTAAACCAGAGTTGAGGG+AGG - chr4_3:19494847-19494866 None:intergenic 45.0%
GGGGGTTAAATGGCTAAAAC+AGG + chr4_3:19495023-19495042 Msa0633710:intron 45.0%
TGTGTCTACAGGTGCAAAAG+AGG + chr4_3:19495335-19495354 Msa0633710:intron 45.0%
GGCTGGATGTTTCAAAACCA+GGG + chr4_3:19495528-19495547 Msa0633710:CDS 45.0%
GCTGGATGTTTCAAAACCAG+GGG + chr4_3:19495529-19495548 Msa0633710:CDS 45.0%
GCCGGTTGGATGAACAAATA+AGG + chr4_3:19495876-19495895 Msa0633710:CDS 45.0%
ACTTCCAAAGTGGTACCATG+TGG - chr4_3:19496348-19496367 None:intergenic 45.0%
AGGATCAGGTACTTCCAAAG+TGG - chr4_3:19496358-19496377 None:intergenic 45.0%
GGGATAATCAACAGCCTAAC+AGG - chr4_3:19496462-19496481 None:intergenic 45.0%
GGACTATCCTGTATCTTCTC+TGG - chr4_3:19496484-19496503 None:intergenic 45.0%
! GATAGTCCTGAGAAGCACAA+TGG + chr4_3:19496496-19496515 Msa0633710:CDS 45.0%
GAGAAGTTTGAGGAGATCCA+CGG + chr4_3:19496720-19496739 Msa0633710:CDS 45.0%
! TTCTGGACTGGGTGGAAATT+TGG - chr4_3:19496760-19496779 None:intergenic 45.0%
! TTGTTAACTTCTGGACTGGG+TGG - chr4_3:19496768-19496787 None:intergenic 45.0%
ACTGTGGTCCCAGAAGATAA+AGG + chr4_3:19496807-19496826 Msa0633710:CDS 45.0%
CTGTGGTCCCAGAAGATAAA+GGG + chr4_3:19496808-19496827 Msa0633710:CDS 45.0%
TGCAGAGACAAGATGGTGAA+GGG + chr4_3:19496844-19496863 Msa0633710:CDS 45.0%
ACTCACGAAGTCGTGATTGT+TGG - chr4_3:19496886-19496905 None:intergenic 45.0%
AACAATCACGACTTCGTGAG+TGG + chr4_3:19496885-19496904 Msa0633710:CDS 45.0%
ACAATCACGACTTCGTGAGT+GGG + chr4_3:19496886-19496905 Msa0633710:CDS 45.0%
! AACAAATATCCCACGGACTG+AGG - chr4_3:19496952-19496971 None:intergenic 45.0%
! TGCAGAGTGATGCTGATTAC+TGG + chr4_3:19497149-19497168 Msa0633710:intron 45.0%
GCAAACACGCCAAAAGAGAA+GGG + chr4_3:19497304-19497323 Msa0633710:intron 45.0%
CAAACACGCCAAAAGAGAAG+GGG + chr4_3:19497305-19497324 Msa0633710:intron 45.0%
! CTTCCAAACCCCTTCTCTTT+TGG - chr4_3:19497316-19497335 None:intergenic 45.0%
GCTTCATCCTACAGTAGTGT+TGG - chr4_3:19497489-19497508 None:intergenic 45.0%
CTGTAGGATGAAGCCTCAAA+AGG + chr4_3:19497495-19497514 Msa0633710:exon 45.0%
GGATGTCATAGGTTCTCAGT+TGG - chr4_3:19497559-19497578 None:intergenic 45.0%
AACCTTCAATCCAAACTCGC+AGG - chr4_3:19497589-19497608 None:intergenic 45.0%
TCATCAAGAAGCTTGTCCTG+AGG + chr4_3:19497633-19497652 Msa0633710:three_prime_UTR 45.0%
GAACTGAATGGCCAGTCAAA+TGG + chr4_3:19497655-19497674 Msa0633710:three_prime_UTR 45.0%
!!! TTATTTTCTTTTAATATATT+AGG - chr4_3:19494499-19494518 None:intergenic 5.0%
!!! TTAAAAGAAAATAAATATTT+TGG + chr4_3:19494505-19494524 Msa0633710:intron 5.0%
AGAGAAAGGGAAGAGGGAGA+GGG - chr4_3:19491761-19491780 None:intergenic 50.0%
GGAAAAAGCGGGAGAGAGAA+AGG - chr4_3:19491775-19491794 None:intergenic 50.0%
GTTGACGTTGCTGCATGATC+TGG - chr4_3:19491912-19491931 None:intergenic 50.0%
GGAGGTTTCATGGAGGAGAA+AGG - chr4_3:19491937-19491956 None:intergenic 50.0%
GAGAAAGGGAGGTTTCATGG+AGG - chr4_3:19491944-19491963 None:intergenic 50.0%
TGCGAAGCGGTGATAATCTC+CGG - chr4_3:19491971-19491990 None:intergenic 50.0%
CACAAGTGTTAGTGTCGTGC+CGG - chr4_3:19492352-19492371 None:intergenic 50.0%
CGACATGTTAGTGTCGTGTC+AGG + chr4_3:19492414-19492433 Msa0633710:intron 50.0%
GACTAAGGGCCAGTTTGGAT+TGG - chr4_3:19492749-19492768 None:intergenic 50.0%
GGGTTACCATACTTGGTCGA+AGG + chr4_3:19493053-19493072 Msa0633710:intron 50.0%
!! TGGCTTTGTAATACGGCTGG+AGG + chr4_3:19493544-19493563 Msa0633710:intron 50.0%
GTGTTTGCGGCTGCATTTCA+TGG + chr4_3:19493612-19493631 Msa0633710:intron 50.0%
TTTGCGGCTGCATTTCATGG+TGG + chr4_3:19493615-19493634 Msa0633710:intron 50.0%
CTGCACAAACCCATTCACTC+TGG + chr4_3:19493658-19493677 Msa0633710:intron 50.0%
GGAAGTTTCTTGCCATGAGC+TGG + chr4_3:19493690-19493709 Msa0633710:intron 50.0%
! TAGAAAAGAGGGGCGTAGGT+AGG - chr4_3:19493921-19493940 None:intergenic 50.0%
! TAGGTAGAAAAGAGGGGCGT+AGG - chr4_3:19493925-19493944 None:intergenic 50.0%
ATAGTGCTTGAGAGGAGAGC+GGG - chr4_3:19494021-19494040 None:intergenic 50.0%
GATAGTGCTTGAGAGGAGAG+CGG - chr4_3:19494022-19494041 None:intergenic 50.0%
CAACTGGGATAGTGCTTGAG+AGG - chr4_3:19494029-19494048 None:intergenic 50.0%
ACGTTGTTGATCTCGGACAG+TGG - chr4_3:19494071-19494090 None:intergenic 50.0%
TCAGGTGATAGGATGACTCC+TGG + chr4_3:19494296-19494315 Msa0633710:CDS 50.0%
! AGAACTATTGGCTGCTGCAG+TGG - chr4_3:19494324-19494343 None:intergenic 50.0%
TCTGTTCAGACGCCTGTATC+TGG + chr4_3:19494341-19494360 Msa0633710:CDS 50.0%
GACGCCTGTATCTGGAAAAG+CGG + chr4_3:19494349-19494368 Msa0633710:CDS 50.0%
ACGCCTGTATCTGGAAAAGC+GGG + chr4_3:19494350-19494369 Msa0633710:CDS 50.0%
!! TTCCCCGCTTTTCCAGATAC+AGG - chr4_3:19494356-19494375 None:intergenic 50.0%
TGTATCTGGAAAAGCGGGGA+AGG + chr4_3:19494355-19494374 Msa0633710:CDS 50.0%
GTATCTGGAAAAGCGGGGAA+GGG + chr4_3:19494356-19494375 Msa0633710:CDS 50.0%
GGAAGGGAGGAAAAACCTCT+AGG + chr4_3:19494372-19494391 Msa0633710:CDS 50.0%
AGAACTGGAACTCAAACCCC+TGG + chr4_3:19494410-19494429 Msa0633710:CDS 50.0%
GGAAATAATCTCACCCCTGC+TGG + chr4_3:19494636-19494655 Msa0633710:CDS 50.0%
ATATCGACATGGACCAGCAG+GGG - chr4_3:19494652-19494671 None:intergenic 50.0%
CATATCGACATGGACCAGCA+GGG - chr4_3:19494653-19494672 None:intergenic 50.0%
TCATATCGACATGGACCAGC+AGG - chr4_3:19494654-19494673 None:intergenic 50.0%
CACTTAACCTCCCTCAACTC+TGG + chr4_3:19494837-19494856 Msa0633710:intron 50.0%
GTCTACAGGTGCAAAAGAGG+AGG + chr4_3:19495338-19495357 Msa0633710:intron 50.0%
GCCCCCTGGTCAATTATCAA+AGG - chr4_3:19495511-19495530 None:intergenic 50.0%
! TTGATAATTGACCAGGGGGC+TGG + chr4_3:19495511-19495530 Msa0633710:intron 50.0%
!!! TTTTGAAACATCCAGCCCCC+TGG - chr4_3:19495525-19495544 None:intergenic 50.0%
GGGCTGGATGTTTCAAAACC+AGG + chr4_3:19495527-19495546 Msa0633710:CDS 50.0%
GGATGTTTCAAAACCAGGGG+AGG + chr4_3:19495532-19495551 Msa0633710:CDS 50.0%
AACAATTGAGGAACGCCGGT+TGG + chr4_3:19495862-19495881 Msa0633710:CDS 50.0%
AAAGAACTTGCCCTGCTTCC+AGG + chr4_3:19496179-19496198 Msa0633710:CDS 50.0%
GGGAAACTAACCTGGAAGCA+GGG - chr4_3:19496192-19496211 None:intergenic 50.0%
AGGGAAACTAACCTGGAAGC+AGG - chr4_3:19496193-19496212 None:intergenic 50.0%
AGCTCCACATGGTACCACTT+TGG + chr4_3:19496341-19496360 Msa0633710:CDS 50.0%
!! GGAAGTACCTGATCCTGATG+AGG + chr4_3:19496362-19496381 Msa0633710:CDS 50.0%
TGGATGCAACATCAACACCG+TGG - chr4_3:19496740-19496759 None:intergenic 50.0%
!! TCTTCTGGGACCACAGTTGA+TGG - chr4_3:19496804-19496823 None:intergenic 50.0%
GGTCCCAGAAGATAAAGGGA+AGG + chr4_3:19496812-19496831 Msa0633710:CDS 50.0%
GTGCAGAGACAAGATGGTGA+AGG + chr4_3:19496843-19496862 Msa0633710:CDS 50.0%
TAAGCATCACCTCAGTCCGT+GGG + chr4_3:19496940-19496959 Msa0633710:intron 50.0%
! GGAGACTAAGGTGTCTAGAG+AGG - chr4_3:19497228-19497247 None:intergenic 50.0%
CGCAAACACGCCAAAAGAGA+AGG + chr4_3:19497303-19497322 Msa0633710:intron 50.0%
ACGCCAAAAGAGAAGGGGTT+TGG + chr4_3:19497310-19497329 Msa0633710:intron 50.0%
TCAATCCAAACTCGCAGGTC+TGG - chr4_3:19497584-19497603 None:intergenic 50.0%
GACCTGCGAGTTTGGATTGA+AGG + chr4_3:19497584-19497603 Msa0633710:three_prime_UTR 50.0%
GCTTGTCCTGAGGAACTGAA+TGG + chr4_3:19497643-19497662 Msa0633710:three_prime_UTR 50.0%
GAGAGAAAGGGAAGAGGGAG+AGG - chr4_3:19491762-19491781 None:intergenic 55.0%
CGGGAGAGAGAAAGGGAAGA+GGG - chr4_3:19491767-19491786 None:intergenic 55.0%
TGCCGGCGATGGAAGGAAAT+GGG - chr4_3:19491843-19491862 None:intergenic 55.0%
CGTTGCTGCATGATCTGGTC+CGG - chr4_3:19491907-19491926 None:intergenic 55.0%
GGCGAGAAAGGGAGGTTTCA+TGG - chr4_3:19491947-19491966 None:intergenic 55.0%
TAATCTCCGGCGGCGAGAAA+GGG - chr4_3:19491958-19491977 None:intergenic 55.0%
ATAATCTCCGGCGGCGAGAA+AGG - chr4_3:19491959-19491978 None:intergenic 55.0%
GAAGCGGTGATAATCTCCGG+CGG - chr4_3:19491968-19491987 None:intergenic 55.0%
TCTTGATTCCGGCGGTGATC+AGG - chr4_3:19491994-19492013 None:intergenic 55.0%
TGTAATACGGCTGGAGGCCT+TGG + chr4_3:19493550-19493569 Msa0633710:intron 55.0%
TGCATTTAGCGTCGCAGCCA+AGG - chr4_3:19493570-19493589 None:intergenic 55.0%
CGCCTGTATCTGGAAAAGCG+GGG + chr4_3:19494351-19494370 Msa0633710:CDS 55.0%
AAACTATCATCGGCCTCCCC+TGG - chr4_3:19495548-19495567 None:intergenic 55.0%
TTGGGCCCATTGTGCTTCTC+AGG - chr4_3:19496505-19496524 None:intergenic 55.0%
GTAAGCATCACCTCAGTCCG+TGG + chr4_3:19496939-19496958 Msa0633710:intron 55.0%
CAGGTCTGGCTGGATGTCAT+AGG - chr4_3:19497570-19497589 None:intergenic 55.0%
! GACTGGCCATTCAGTTCCTC+AGG - chr4_3:19497652-19497671 None:intergenic 55.0%
GCGGGAGAGAGAAAGGGAAG+AGG - chr4_3:19491768-19491787 None:intergenic 60.0%
CCGGCGATGGAAGGAAATGG+GGG - chr4_3:19491841-19491860 None:intergenic 60.0%
CCCCCATTTCCTTCCATCGC+CGG + chr4_3:19491838-19491857 Msa0633710:five_prime_UTR 60.0%
GCCGGCGATGGAAGGAAATG+GGG - chr4_3:19491842-19491861 None:intergenic 60.0%
CTGCCGGCGATGGAAGGAAA+TGG - chr4_3:19491844-19491863 None:intergenic 60.0%
CATTTCCTTCCATCGCCGGC+AGG + chr4_3:19491842-19491861 Msa0633710:five_prime_UTR 60.0%
AAACCTCCCTTTCTCGCCGC+CGG + chr4_3:19491949-19491968 Msa0633710:CDS 60.0%
GTCCGACACGTGTCAGACAC+CGG + chr4_3:19492330-19492349 Msa0633710:intron 60.0%
TGCCGGTGTCTGACACGTGT+CGG - chr4_3:19492335-19492354 None:intergenic 60.0%
GCGGCTGCATTTCATGGTGG+CGG + chr4_3:19493618-19493637 Msa0633710:intron 60.0%
!! TCATGGTGGCGGCCGAAACA+AGG + chr4_3:19493629-19493648 Msa0633710:intron 60.0%
!! CATGGTGGCGGCCGAAACAA+GGG + chr4_3:19493630-19493649 Msa0633710:intron 60.0%
TAGTCTCCGCAGGTGCTCGT+GGG - chr4_3:19494181-19494200 None:intergenic 60.0%
TTAGTCTCCGCAGGTGCTCG+TGG - chr4_3:19494182-19494201 None:intergenic 60.0%
TTGGCTGCTGCAGTGGATCC+AGG - chr4_3:19494317-19494336 None:intergenic 60.0%
TCTGGAAAAGCGGGGAAGGG+AGG + chr4_3:19494359-19494378 Msa0633710:CDS 60.0%
TCCAGCCAGACCTGCGAGTT+TGG + chr4_3:19497576-19497595 Msa0633710:three_prime_UTR 60.0%
TCCAAACTCGCAGGTCTGGC+TGG - chr4_3:19497580-19497599 None:intergenic 60.0%
TTCGCTCTCAGGCAAAGCGC+TGG + chr4_3:19497860-19497879 Msa0633710:three_prime_UTR 60.0%
TTCCTTCCATCGCCGGCAGG+TGG + chr4_3:19491845-19491864 Msa0633710:five_prime_UTR 65.0%
ATCCACCTGCCGGCGATGGA+AGG - chr4_3:19491850-19491869 None:intergenic 65.0%
CATCGCCGGCAGGTGGATGT+CGG + chr4_3:19491852-19491871 Msa0633710:exon 65.0%
ATCGCCGGCAGGTGGATGTC+GGG + chr4_3:19491853-19491872 Msa0633710:exon 65.0%
CTGCATGATCTGGTCCGGCG+CGG - chr4_3:19491902-19491921 None:intergenic 65.0%
GGCGGTGATCAGGTGCGAAG+CGG - chr4_3:19491984-19492003 None:intergenic 65.0%
GCTTCGCACCTGATCACCGC+CGG + chr4_3:19491983-19492002 Msa0633710:CDS 65.0%
AGGTGCTCGTGGGGATACCG+TGG - chr4_3:19494171-19494190 None:intergenic 65.0%
GGTATCCCCACGAGCACCTG+CGG + chr4_3:19494172-19494191 Msa0633710:intron 65.0%
AGTCTCCGCAGGTGCTCGTG+GGG - chr4_3:19494180-19494199 None:intergenic 65.0%
CGACATCCACCTGCCGGCGA+TGG - chr4_3:19491854-19491873 None:intergenic 70.0%
GGTGCCCGACATCCACCTGC+CGG - chr4_3:19491860-19491879 None:intergenic 70.0%
!! GGCGGTGGCGGGAGGAGTTT+GGG - chr4_3:19491881-19491900 None:intergenic 70.0%
CATGATCTGGTCCGGCGCGG+CGG - chr4_3:19491899-19491918 None:intergenic 70.0%
TCTCCGGCGGCGAGAAAGGG+AGG - chr4_3:19491955-19491974 None:intergenic 70.0%
!! CGGCGGTGGCGGGAGGAGTT+TGG - chr4_3:19491882-19491901 None:intergenic 75.0%
! GATCTGGTCCGGCGCGGCGG+TGG - chr4_3:19491896-19491915 None:intergenic 80.0%
! TCCTCCCGCCACCGCCGCGC+CGG + chr4_3:19491885-19491904 Msa0633710:CDS 85.0%
! TGGTCCGGCGCGGCGGTGGC+GGG - chr4_3:19491892-19491911 None:intergenic 85.0%
! CTGGTCCGGCGCGGCGGTGG+CGG - chr4_3:19491893-19491912 None:intergenic 85.0%
!!! TCCGGCGCGGCGGTGGCGGG+AGG - chr4_3:19491889-19491908 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 19491698 19497957 19491698 ID=Msa0633710;Name=Msa0633710
chr4_3 mRNA 19491698 19497957 19491698 ID=Msa0633710-mRNA-1;Parent=Msa0633710;Name=Msa0633710-mRNA-1;_AED=0.09;_eAED=0.09;_QI=170|0.92|0.92|1|1|1|14|452|457
chr4_3 exon 19491698 19492047 19491698 ID=Msa0633710-mRNA-1:exon:5325;Parent=Msa0633710-mRNA-1
chr4_3 exon 19494263 19494443 19494263 ID=Msa0633710-mRNA-1:exon:5326;Parent=Msa0633710-mRNA-1
chr4_3 exon 19494625 19494684 19494625 ID=Msa0633710-mRNA-1:exon:5327;Parent=Msa0633710-mRNA-1
chr4_3 exon 19495182 19495267 19495182 ID=Msa0633710-mRNA-1:exon:5328;Parent=Msa0633710-mRNA-1
chr4_3 exon 19495346 19495434 19495346 ID=Msa0633710-mRNA-1:exon:5329;Parent=Msa0633710-mRNA-1
chr4_3 exon 19495526 19495580 19495526 ID=Msa0633710-mRNA-1:exon:5330;Parent=Msa0633710-mRNA-1
chr4_3 exon 19495845 19495897 19495845 ID=Msa0633710-mRNA-1:exon:5331;Parent=Msa0633710-mRNA-1
chr4_3 exon 19495995 19496045 19495995 ID=Msa0633710-mRNA-1:exon:5332;Parent=Msa0633710-mRNA-1
chr4_3 exon 19496152 19496200 19496152 ID=Msa0633710-mRNA-1:exon:5333;Parent=Msa0633710-mRNA-1
chr4_3 exon 19496318 19496383 19496318 ID=Msa0633710-mRNA-1:exon:5334;Parent=Msa0633710-mRNA-1
chr4_3 exon 19496467 19496543 19496467 ID=Msa0633710-mRNA-1:exon:5335;Parent=Msa0633710-mRNA-1
chr4_3 exon 19496710 19496938 19496710 ID=Msa0633710-mRNA-1:exon:5336;Parent=Msa0633710-mRNA-1
chr4_3 exon 19497154 19497220 19497154 ID=Msa0633710-mRNA-1:exon:5337;Parent=Msa0633710-mRNA-1
chr4_3 exon 19497375 19497957 19497375 ID=Msa0633710-mRNA-1:exon:5338;Parent=Msa0633710-mRNA-1
chr4_3 five_prime_UTR 19491698 19491867 19491698 ID=Msa0633710-mRNA-1:five_prime_utr;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19491868 19492047 19491868 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19494263 19494443 19494263 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19494625 19494684 19494625 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19495182 19495267 19495182 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19495346 19495434 19495346 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19495526 19495580 19495526 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19495845 19495897 19495845 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19495995 19496045 19495995 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19496152 19496200 19496152 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19496318 19496383 19496318 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19496467 19496543 19496467 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19496710 19496938 19496710 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19497154 19497220 19497154 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 CDS 19497375 19497505 19497375 ID=Msa0633710-mRNA-1:cds;Parent=Msa0633710-mRNA-1
chr4_3 three_prime_UTR 19497506 19497957 19497506 ID=Msa0633710-mRNA-1:three_prime_utr;Parent=Msa0633710-mRNA-1
Gene Sequence

>Msa0633710

ATGTCGGGCACCCAAACTCCTCCCGCCACCGCCGCGCCGGACCAGATCATGCAGCAACGTCAACTCCCTTTCTCCTCCATGAAACCTCCCTTTCTCGCCGCCGGAGATTATCACCGCTTCGCACCTGATCACCGCCGGAATCAAGACCTAGAAACTGAAGCTATCGTTGTTAAAACTCCTCGGAAGAGTGAAGCAGCTGATTTTGAAGCTGATTCAGGTGATAGGATGACTCCTGGATCCACTGCAGCAGCCAATAGTTCTGTTCAGACGCCTGTATCTGGAAAAGCGGGGAAGGGAGGAAAAACCTCTAGGATGACAAAAAGCAACAGAACTGGAACTCAAACCCCTGGCTCAAATATTGGTTCTCCTTCAGGAAATAATCTCACCCCTGCTGGTCCATGTCGATATGACAGCTCATTAGGTCTGTTGACAAAAAAGTTCATCGAGTTAATAAAACAAGCAGAGGATGGTATTCTTGATCTAAATAATGCTGCTGACACATTAGAGGTGCAAAAGAGGAGGATATATGATATTACAAATGTTCTTGAAGGGATTGGCCTTATAGAAAAAAAGCTCAAGAACAGAATTCAGTGGAAGGGGCTGGATGTTTCAAAACCAGGGGAGGCCGATGATAGTTTTTCTAGTTTACAGGCGGAAATTGAAAATTTAACAATTGAGGAACGCCGGTTGGATGAACAAATAAGGGATATGCAAGAAAGACTACGGAATCTCAGTGAAGATGAAAATAATGAGAAGATTCTTTTTGTCACTGAGGAAGATATAAAGAACTTGCCCTGCTTCCAGAATGAAACCTTGATAGCAATTAAAGCTCCACATGGTACCACTTTGGAAGTACCTGATCCTGATGAGGCTGTTGATTATCCCCAGAGAAGATACAGGATAGTCCTGAGAAGCACAATGGGCCCAATAGATGTTTACCTTGTTAGTCAATTTGAAGAGAAGTTTGAGGAGATCCACGGTGTTGATGTTGCATCCAAATTTCCACCCAGTCCAGAAGTTAACAAAGTTAACAAGGATCCATCAACTGTGGTCCCAGAAGATAAAGGGAAGGAAATAGAAGTGCAGAGACAAGATGGTGAAGGGCCTAGTACAGATGTTACCAACAATCACGACTTCGTGAGTGGGATCATGAAGATTGTTCCTTCAGATGTTGCTAGTGATGCTGATTACTGGCTTTTATCTGATGCCGATGTTAGCATAACCGATATGTGGAGAACAGAACCTGGGGTAGAATGGAATGAACTCGAAGCACTTCAAGAAGAATATTGTATGGCTCGTGAGCAAACTACAACCCCAAATCATGCTTCAAATATTGGTGAAGTGCCTTCTACATCCAACACTACTGTAGGATGA

Protein sequence

>Msa0633710

MSGTQTPPATAAPDQIMQQRQLPFSSMKPPFLAAGDYHRFAPDHRRNQDLETEAIVVKTPRKSEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKTSRMTKSNRTGTQTPGSNIGSPSGNNLTPAGPCRYDSSLGLLTKKFIELIKQAEDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSKPGEADDSFSSLQAEIENLTIEERRLDEQIRDMQERLRNLSEDENNEKILFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEIHGVDVASKFPPSPEVNKVNKDPSTVVPEDKGKEIEVQRQDGEGPSTDVTNNHDFVSGIMKIVPSDVASDADYWLLSDADVSITDMWRTEPGVEWNELEALQEEYCMAREQTTTPNHASNIGEVPSTSNTTVG*