Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0634560 | AES87618.2 | 98.381 | 741 | 12 | 0 | 1 | 741 | 50 | 790 | 0.0 | 1504 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0634560 | sp|O81122|ETR1_MALDO | 83.941 | 741 | 118 | 1 | 2 | 741 | 1 | 741 | 0.0 | 1295 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0634560 | TR | Others |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0634560 | MtrunA17_Chr4g0013831 | 98.381 | 741 | 12 | 0 | 1 | 741 | 1 | 741 | 0.0 | 1502 |
Msa0634560 | MtrunA17_Chr7g0269631 | 73.280 | 625 | 163 | 2 | 1 | 623 | 1 | 623 | 0.0 | 900 |
Msa0634560 | MtrunA17_Chr1g0186431 | 41.689 | 746 | 406 | 18 | 5 | 739 | 29 | 756 | 2.78e-174 | 518 |
Msa0634560 | MtrunA17_Chr7g0274831 | 39.519 | 749 | 412 | 16 | 5 | 734 | 34 | 760 | 1.33e-163 | 491 |
Msa0634560 | MtrunA17_Chr1g0190021 | 38.235 | 748 | 430 | 18 | 3 | 734 | 26 | 757 | 6.49e-156 | 471 |
Msa0634560 | MtrunA17_Chr1g0168161 | 37.281 | 743 | 444 | 13 | 5 | 735 | 28 | 760 | 5.50e-150 | 456 |
Msa0634560 | MtrunA17_Chr3g0122391 | 28.177 | 362 | 213 | 6 | 335 | 655 | 431 | 786 | 1.94e-34 | 141 |
Msa0634560 | MtrunA17_Chr3g0122391 | 33.884 | 121 | 72 | 3 | 612 | 724 | 896 | 1016 | 7.95e-12 | 68.9 |
Msa0634560 | MtrunA17_Chr8g0377481 | 28.883 | 367 | 216 | 8 | 335 | 663 | 383 | 742 | 8.99e-34 | 139 |
Msa0634560 | MtrunA17_Chr8g0377481 | 31.081 | 148 | 85 | 5 | 593 | 724 | 813 | 959 | 2.19e-12 | 70.9 |
Msa0634560 | MtrunA17_Chr3g0136601 | 30.117 | 342 | 177 | 9 | 300 | 600 | 331 | 651 | 9.76e-33 | 135 |
Msa0634560 | MtrunA17_Chr5g0405701 | 30.640 | 297 | 178 | 6 | 334 | 605 | 499 | 792 | 1.85e-29 | 125 |
Msa0634560 | MtrunA17_Chr8g0371601 | 31.321 | 265 | 159 | 3 | 334 | 575 | 461 | 725 | 1.06e-28 | 123 |
Msa0634560 | MtrunA17_Chr5g0447641 | 28.736 | 348 | 203 | 5 | 338 | 646 | 611 | 952 | 2.68e-28 | 122 |
Msa0634560 | MtrunA17_Chr8g0392301 | 28.962 | 366 | 196 | 8 | 338 | 646 | 377 | 735 | 5.21e-28 | 121 |
Msa0634560 | MtrunA17_Chr1g0150511 | 38.095 | 147 | 88 | 2 | 348 | 493 | 380 | 524 | 4.52e-24 | 108 |
Msa0634560 | MtrunA17_Chr1g0194741 | 24.916 | 297 | 165 | 7 | 312 | 562 | 367 | 651 | 6.64e-14 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0634560 | AT1G66340.1 | 79.730 | 740 | 144 | 3 | 2 | 739 | 1 | 736 | 0.0 | 1207 |
Msa0634560 | AT2G40940.1 | 70.220 | 591 | 176 | 0 | 2 | 592 | 1 | 591 | 0.0 | 845 |
Msa0634560 | AT3G23150.1 | 38.421 | 760 | 411 | 18 | 5 | 732 | 32 | 766 | 8.15e-150 | 456 |
Msa0634560 | AT3G04580.2 | 38.255 | 745 | 437 | 16 | 4 | 733 | 26 | 762 | 4.08e-149 | 454 |
Msa0634560 | AT3G04580.1 | 38.255 | 745 | 437 | 16 | 4 | 733 | 26 | 762 | 4.08e-149 | 454 |
Msa0634560 | AT3G23150.2 | 44.720 | 483 | 248 | 8 | 5 | 480 | 32 | 502 | 4.18e-125 | 386 |
Msa0634560 | AT1G04310.1 | 39.165 | 503 | 281 | 9 | 5 | 492 | 34 | 526 | 2.55e-97 | 315 |
Msa0634560 | AT1G04310.2 | 39.165 | 503 | 281 | 9 | 5 | 492 | 34 | 526 | 2.55e-97 | 315 |
Msa0634560 | AT5G10720.1 | 33.449 | 287 | 165 | 8 | 323 | 590 | 339 | 618 | 4.05e-37 | 150 |
Msa0634560 | AT1G27320.1 | 26.350 | 463 | 292 | 10 | 304 | 728 | 410 | 861 | 1.26e-33 | 139 |
Msa0634560 | AT5G35750.1 | 29.444 | 360 | 190 | 6 | 335 | 646 | 578 | 921 | 6.67e-33 | 137 |
Msa0634560 | AT2G01830.5 | 28.451 | 355 | 204 | 6 | 338 | 646 | 455 | 805 | 2.87e-30 | 129 |
Msa0634560 | AT2G01830.2 | 28.451 | 355 | 204 | 6 | 338 | 646 | 466 | 816 | 3.45e-30 | 128 |
Msa0634560 | AT2G01830.1 | 28.451 | 355 | 204 | 6 | 338 | 646 | 443 | 793 | 3.79e-30 | 128 |
Msa0634560 | AT2G01830.4 | 28.451 | 355 | 204 | 6 | 338 | 646 | 443 | 793 | 3.79e-30 | 128 |
Msa0634560 | AT2G01830.6 | 28.451 | 355 | 204 | 6 | 338 | 646 | 443 | 793 | 3.79e-30 | 128 |
Msa0634560 | AT2G01830.3 | 28.451 | 355 | 204 | 6 | 338 | 646 | 443 | 793 | 3.79e-30 | 128 |
Msa0634560 | AT2G17820.1 | 31.228 | 285 | 169 | 7 | 314 | 575 | 472 | 752 | 2.36e-29 | 125 |
Msa0634560 | AT2G47430.1 | 28.846 | 312 | 176 | 12 | 318 | 592 | 373 | 675 | 7.39e-18 | 89.0 |
Msa0634560 | AT4G16250.1 | 23.045 | 243 | 158 | 7 | 330 | 567 | 918 | 1136 | 6.55e-13 | 73.2 |
Find 180 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTCAACTTGTTTGTATTTC+CGG | 0.166586 | 4_3:-21887920 | None:intergenic |
TTTGAAAATTAGAAAGATTT+AGG | 0.173765 | 4_3:-21885396 | None:intergenic |
GGAACACAAAGTCGTCTTTA+TGG | 0.212920 | 4_3:+21887804 | Msa0634560:CDS |
CCATGATTTACTAGAGCTTT+AGG | 0.235011 | 4_3:-21886872 | None:intergenic |
AAGGGACTTCTTATCCATTT+AGG | 0.238284 | 4_3:+21887727 | Msa0634560:CDS |
CTGGGGCAGTAGTTGCTATT+CGG | 0.247378 | 4_3:+21885365 | Msa0634560:CDS |
CAACACATCTAATAAATTTA+TGG | 0.259500 | 4_3:+21884834 | Msa0634560:CDS |
TTGGGCTTGCAATTTGTAAA+AGG | 0.274774 | 4_3:+21886612 | Msa0634560:CDS |
GCGGTCAAGTTCAATGAATT+TGG | 0.286523 | 4_3:-21883428 | None:intergenic |
TTGTGACATCGCATCCTAAA+TGG | 0.288123 | 4_3:-21887741 | None:intergenic |
CTAATATCCCGGAAGGATTC+AGG | 0.288250 | 4_3:-21886326 | None:intergenic |
ATCTCATGGAAGGACATATT+TGG | 0.289745 | 4_3:+21886753 | Msa0634560:CDS |
AACTAGAAGCTATGCTTTGA+TGG | 0.293229 | 4_3:+21885441 | Msa0634560:CDS |
AACAAAGCACTCACATAAAA+AGG | 0.294642 | 4_3:+21888148 | Msa0634560:three_prime_UTR |
CTGCAGTATTTCCATATAGA+TGG | 0.300370 | 4_3:+21884771 | Msa0634560:CDS |
GTTCTTGTCATGGATGATAA+TGG | 0.309504 | 4_3:+21886920 | Msa0634560:CDS |
CATGGATCTACAAACATTTC+CGG | 0.322079 | 4_3:+21886890 | Msa0634560:CDS |
TTCATCTTCTCAACAGAAAC+AGG | 0.336907 | 4_3:-21887988 | None:intergenic |
TGAACAAGGACCCATCTATA+TGG | 0.340257 | 4_3:-21884782 | None:intergenic |
AGCTCTCAAACAGTTCTCTT+TGG | 0.340716 | 4_3:-21887941 | None:intergenic |
CAAATTCTTCTCAATGTTGT+TGG | 0.342418 | 4_3:+21886245 | Msa0634560:CDS |
TTGTGAACTTCTCTTGTATA+CGG | 0.348610 | 4_3:-21887864 | None:intergenic |
TACCCTCGTCAACGATGTTT+TGG | 0.349557 | 4_3:+21885925 | Msa0634560:CDS |
TTGTGGCTCAATACAATTGC+AGG | 0.351088 | 4_3:-21884642 | None:intergenic |
CGGTAGAACTCTTGGGTTAG+AGG | 0.352498 | 4_3:+21885144 | Msa0634560:CDS |
AATCCCGTTGGAAGTGGGCT+TGG | 0.357776 | 4_3:+21886593 | Msa0634560:CDS |
TTAATGTAGTTATGTGATTA+CGG | 0.358336 | 4_3:+21884579 | Msa0634560:intron |
CCACTTATAGTTGCTCTTAC+CGG | 0.360015 | 4_3:+21887901 | Msa0634560:CDS |
ACGTTATAGGTAAAAGATTC+AGG | 0.366131 | 4_3:+21886497 | Msa0634560:intron |
GCAAACTTAGTGAATAACTT+TGG | 0.366968 | 4_3:-21886545 | None:intergenic |
CTTGGTACTGGTAGGAAATC+AGG | 0.368046 | 4_3:-21886353 | None:intergenic |
TTGTAAAGCCTGAATCCTTC+CGG | 0.368840 | 4_3:+21886318 | Msa0634560:CDS |
ACATTTCGCATCAGATTTGC+CGG | 0.371012 | 4_3:+21886190 | Msa0634560:CDS |
TGAGGTCGTAATCTAGCAAC+TGG | 0.378008 | 4_3:-21885325 | None:intergenic |
TTATGGATGCCGACACGTAC+TGG | 0.379232 | 4_3:+21885175 | Msa0634560:CDS |
CCCTAGGCCACTGTTGAGTC+TGG | 0.379415 | 4_3:+21888182 | Msa0634560:three_prime_UTR |
TGGGGCAGTAGTTGCTATTC+GGG | 0.384904 | 4_3:+21885366 | Msa0634560:CDS |
CGGTCAAGTTCAATGAATTT+GGG | 0.386459 | 4_3:-21883427 | None:intergenic |
ATTCGTACGCAGGAAGAAAC+TGG | 0.390104 | 4_3:+21885040 | Msa0634560:CDS |
ATGCCTGCGTGTTGTTTCTC+TGG | 0.392416 | 4_3:+21887783 | Msa0634560:CDS |
GTTGAACTCGGTAGAACTCT+TGG | 0.392589 | 4_3:+21885136 | Msa0634560:CDS |
GATGTTTGTACAGGATTAGA+TGG | 0.394310 | 4_3:+21887826 | Msa0634560:CDS |
AGATGGGTCCTTGTTCAGTT+TGG | 0.394532 | 4_3:+21884788 | Msa0634560:CDS |
GAGGGCAAGGGATCAACTTA+TGG | 0.395439 | 4_3:+21885697 | Msa0634560:CDS |
TTATGTGATTACGGCCGAAT+TGG | 0.396186 | 4_3:+21884588 | Msa0634560:five_prime_UTR |
TGCGGAGCTTGATAGAGAAA+TGG | 0.397903 | 4_3:+21885012 | Msa0634560:CDS |
TAAGGTAGTTTATGTTCAAT+TGG | 0.398943 | 4_3:-21886845 | None:intergenic |
TGTTTGAGAGCTGGTGTAAA+TGG | 0.400397 | 4_3:+21887952 | Msa0634560:CDS |
GCAGAACCCTGCTGGATATA+CGG | 0.401781 | 4_3:+21885231 | Msa0634560:CDS |
ATCCCGTTGGAAGTGGGCTT+GGG | 0.404897 | 4_3:+21886594 | Msa0634560:CDS |
GCAGAATGTTGCACTTGATA+TGG | 0.405382 | 4_3:+21885721 | Msa0634560:CDS |
CAACAGGTTTAATCAAGTTA+AGG | 0.407192 | 4_3:-21886139 | None:intergenic |
AAGAAACTGGTCGACATGTT+AGG | 0.407386 | 4_3:+21885053 | Msa0634560:CDS |
TGCACTCTCTTCATTGATGC+AGG | 0.414560 | 4_3:+21885835 | Msa0634560:CDS |
TGTAAAGCCTGAATCCTTCC+GGG | 0.416876 | 4_3:+21886319 | Msa0634560:CDS |
TGGATTGAAAGCGAAGGTAT+TGG | 0.423019 | 4_3:+21886773 | Msa0634560:CDS |
CGGCCTCAAGGTTCTTGTCA+TGG | 0.425638 | 4_3:+21886910 | Msa0634560:CDS |
TTATGTTCAATTGGACGGTC+CGG | 0.429284 | 4_3:-21886836 | None:intergenic |
TTGATCACAGGAAAATTAAT+AGG | 0.429929 | 4_3:-21885256 | None:intergenic |
GTCTTTATGGATGTTTGTAC+AGG | 0.430729 | 4_3:+21887817 | Msa0634560:CDS |
TTCTTGTCATGGATGATAAT+GGG | 0.431607 | 4_3:+21886921 | Msa0634560:CDS |
TTGAACCACCTCAGCCAATT+CGG | 0.431697 | 4_3:-21884602 | None:intergenic |
CATGCTGCAAAATACATGCC+TGG | 0.434848 | 4_3:+21885346 | Msa0634560:CDS |
TTGAACTCGGTAGAACTCTT+GGG | 0.435191 | 4_3:+21885137 | Msa0634560:CDS |
GAATAATATGTACAAGCATA+AGG | 0.435805 | 4_3:-21884940 | None:intergenic |
ACTAGAGCTTTAGGTTTGTA+AGG | 0.436633 | 4_3:-21886863 | None:intergenic |
AAAGGAACGAATAGTGTTGC+AGG | 0.436853 | 4_3:-21883541 | None:intergenic |
TGAATTTGGGTGGGTCGAAA+AGG | 0.441649 | 4_3:-21883414 | None:intergenic |
GACTGCTGAGCAACGTCTAA+TGG | 0.441775 | 4_3:+21885868 | Msa0634560:CDS |
GGTTAGAGGAATGTGCGTTA+TGG | 0.446709 | 4_3:+21885158 | Msa0634560:CDS |
TAGGTAAAAGATTCAGGATC+AGG | 0.449935 | 4_3:+21886503 | Msa0634560:intron |
ACTTGTAATGCAGGGTGAGC+AGG | 0.452723 | 4_3:+21887695 | Msa0634560:intron |
CCTAAAGCTCTAGTAAATCA+TGG | 0.454091 | 4_3:+21886872 | Msa0634560:CDS |
GGTCGAGGTAGTTGCTGATC+AGG | 0.455884 | 4_3:+21885519 | Msa0634560:CDS |
GCTGTTAAGTTCACAAAAGA+AGG | 0.457297 | 4_3:+21886272 | Msa0634560:CDS |
AGCCCAAGCCCACTTCCAAC+GGG | 0.459934 | 4_3:-21886596 | None:intergenic |
TATGTTCAATTGGACGGTCC+GGG | 0.474743 | 4_3:-21886835 | None:intergenic |
TGAAGAAATCTGATATGTAT+TGG | 0.476642 | 4_3:-21884694 | None:intergenic |
CAAACTTAGTGAATAACTTT+GGG | 0.476701 | 4_3:-21886544 | None:intergenic |
GGTGAGCAGGTCAGCGACAA+AGG | 0.476867 | 4_3:+21887708 | Msa0634560:CDS |
TCCAGACTCAACAGTGGCCT+AGG | 0.478845 | 4_3:-21888183 | None:intergenic |
ATGCTGCAAAATACATGCCT+GGG | 0.488762 | 4_3:+21885347 | Msa0634560:CDS |
CTGAAGGAAGAGACAGGAAA+AGG | 0.495155 | 4_3:-21883559 | None:intergenic |
TTCATCAATAAATCATCTGC+TGG | 0.499714 | 4_3:-21884668 | None:intergenic |
GCGGAGCTTGATAGAGAAAT+GGG | 0.500423 | 4_3:+21885013 | Msa0634560:CDS |
AATAATATGTACAAGCATAA+GGG | 0.501867 | 4_3:-21884939 | None:intergenic |
TTGAGACAGCAGAACCCTGC+TGG | 0.507042 | 4_3:+21885223 | Msa0634560:CDS |
GATCTTTCACGGCTTGAAGA+TGG | 0.509985 | 4_3:+21885947 | Msa0634560:CDS |
GGTGCCTTCATAGTTCTATG+TGG | 0.510808 | 4_3:+21884809 | Msa0634560:CDS |
CCTCTCTAAACAACGAATGA+AGG | 0.512451 | 4_3:-21886000 | None:intergenic |
CCTGTACTCGCAAATAAAAG+TGG | 0.513892 | 4_3:-21886382 | None:intergenic |
GAATTTGGGTGGGTCGAAAA+GGG | 0.517674 | 4_3:-21883413 | None:intergenic |
AAGCCCAAGCCCACTTCCAA+CGG | 0.521714 | 4_3:-21886597 | None:intergenic |
CATTGTAAAACTCGGAATCC+CGG | 0.521822 | 4_3:+21886817 | Msa0634560:CDS |
TAGAAGAGTCGATGAGGGCA+AGG | 0.528388 | 4_3:+21885684 | Msa0634560:CDS |
CCGGTAAGAGCAACTATAAG+TGG | 0.528549 | 4_3:-21887901 | None:intergenic |
TACGGCCGAATTGGCTGAGG+TGG | 0.528924 | 4_3:+21884597 | Msa0634560:five_prime_UTR |
GTAGTTTATGTTCAATTGGA+CGG | 0.529052 | 4_3:-21886841 | None:intergenic |
AAGTGGCTATCACTTGGTAC+TGG | 0.534422 | 4_3:-21886365 | None:intergenic |
ATAGGTACCGTATATCCAGC+AGG | 0.535139 | 4_3:-21885238 | None:intergenic |
GTGGTTCAATTCAATCATGA+TGG | 0.535877 | 4_3:+21884616 | Msa0634560:exon |
GATTTGCCGGTGCATGCGAT+TGG | 0.537407 | 4_3:+21886203 | Msa0634560:CDS |
AATAACTTTGGGATGTCTTG+TGG | 0.537838 | 4_3:-21886533 | None:intergenic |
GAAAGCGAAGGTATTGGTAA+AGG | 0.545327 | 4_3:+21886779 | Msa0634560:CDS |
AAATAAAAGTGGCTATCACT+TGG | 0.546436 | 4_3:-21886371 | None:intergenic |
ATTAGATGGTTATGAATTAG+CGG | 0.546628 | 4_3:+21887840 | Msa0634560:CDS |
GTGAGCAGGTCAGCGACAAA+GGG | 0.547570 | 4_3:+21887709 | Msa0634560:CDS |
AGAAAACTGAAGGAAGAGAC+AGG | 0.547706 | 4_3:-21883565 | None:intergenic |
TCATCGCCAATCGCATGCAC+CGG | 0.548370 | 4_3:-21886209 | None:intergenic |
AAATCATCTGCTGGCCATTG+TGG | 0.550408 | 4_3:-21884659 | None:intergenic |
CTAAATACGTGGTTGATCAC+AGG | 0.551611 | 4_3:-21885268 | None:intergenic |
TACAAACATTTCCGGCCTCA+AGG | 0.553478 | 4_3:+21886898 | Msa0634560:CDS |
TATGGATGCCGACACGTACT+GGG | 0.553493 | 4_3:+21885176 | Msa0634560:CDS |
TGCAGTATTTCCATATAGAT+GGG | 0.553503 | 4_3:+21884772 | Msa0634560:CDS |
GCCACTTTCATTGTAAAACT+CGG | 0.554108 | 4_3:+21886809 | Msa0634560:CDS |
TCAAGTTCAATGAATTTGGG+TGG | 0.562533 | 4_3:-21883424 | None:intergenic |
AAAGAGAACTGTTTGAGAGC+TGG | 0.562595 | 4_3:+21887943 | Msa0634560:CDS |
ACAAAGTAGATAAGCTCGAG+CGG | 0.563726 | 4_3:-21884740 | None:intergenic |
CCTTCATTCGTTGTTTAGAG+AGG | 0.564263 | 4_3:+21886000 | Msa0634560:CDS |
AATCAGGAAATCTAATATCC+CGG | 0.566463 | 4_3:-21886337 | None:intergenic |
TAGCTTCTAGTTGAAACCTC+AGG | 0.568702 | 4_3:-21885430 | None:intergenic |
CGAATAGCAACTACTGCCCC+AGG | 0.569883 | 4_3:-21885364 | None:intergenic |
CCAGACTCAACAGTGGCCTA+GGG | 0.573398 | 4_3:-21888182 | None:intergenic |
GAATAATAGAAGAAAACTGA+AGG | 0.574450 | 4_3:-21883575 | None:intergenic |
TAACAGAACTCTTGGAGCGT+CGG | 0.575513 | 4_3:+21888019 | Msa0634560:CDS |
TGCTCCACATAGAACTATGA+AGG | 0.577986 | 4_3:-21884813 | None:intergenic |
TGAAGGCACCAAACTGAACA+AGG | 0.580571 | 4_3:-21884796 | None:intergenic |
CAAAGTAGATAAGCTCGAGC+GGG | 0.583205 | 4_3:-21884739 | None:intergenic |
TACGACAGCAGTTAAAACCT+TGG | 0.584957 | 4_3:-21884903 | None:intergenic |
CAAGTTCAATGAATTTGGGT+GGG | 0.589055 | 4_3:-21883423 | None:intergenic |
CTTTACAACAACCACAGCGA+TGG | 0.589457 | 4_3:-21886303 | None:intergenic |
AAAACGACCCTTGTTGAACT+CGG | 0.590308 | 4_3:+21885124 | Msa0634560:CDS |
GAGCAGGTTTGTGAATCTCA+TGG | 0.590609 | 4_3:+21886739 | Msa0634560:intron |
AAATTAGAAAGATTTAGGAG+AGG | 0.591308 | 4_3:-21885391 | None:intergenic |
GCATGTACATGAGTTAGAGC+TGG | 0.591900 | 4_3:+21885498 | Msa0634560:CDS |
GACAGCAGTTAAAACCTTGG+CGG | 0.594497 | 4_3:-21884900 | None:intergenic |
CATGACAAGAACCTTGAGGC+CGG | 0.595442 | 4_3:-21886909 | None:intergenic |
ATGTACAAGCATAAGGGCAG+TGG | 0.596476 | 4_3:-21884933 | None:intergenic |
GGTTCTTGTATGAATTGTGA+AGG | 0.598228 | 4_3:-21884858 | None:intergenic |
CACGGTTGCTACTAAATACG+TGG | 0.605909 | 4_3:-21885279 | None:intergenic |
GATGCCGACACGTACTGGGT+TGG | 0.605973 | 4_3:+21885180 | Msa0634560:CDS |
AATTGTAATGACCACCGCCA+AGG | 0.606041 | 4_3:+21884886 | Msa0634560:CDS |
AATGGGCTTGATTCGTACGC+AGG | 0.607550 | 4_3:+21885030 | Msa0634560:CDS |
AGCAGTTAAAACCTTGGCGG+TGG | 0.608870 | 4_3:-21884897 | None:intergenic |
AGGAAATCTAATATCCCGGA+AGG | 0.610494 | 4_3:-21886333 | None:intergenic |
GATCCAAAACATCGTTGACG+AGG | 0.611768 | 4_3:-21885928 | None:intergenic |
CACTGTCTAGCACTATCAGA+TGG | 0.612788 | 4_3:-21885475 | None:intergenic |
GGTGGTCATTACAATTGCCA+CGG | 0.613246 | 4_3:-21884879 | None:intergenic |
AAAGGTGTAAAGGAAGCCCT+AGG | 0.617921 | 4_3:+21888166 | Msa0634560:three_prime_UTR |
GAGTTCTACCGAGTTCAACA+AGG | 0.619729 | 4_3:-21885132 | None:intergenic |
AGGTTTGTGAATCTCATGGA+AGG | 0.621756 | 4_3:+21886743 | Msa0634560:intron |
AGAAGAGTCGATGAGGGCAA+GGG | 0.622079 | 4_3:+21885685 | Msa0634560:CDS |
CATATTTGGATTGAAAGCGA+AGG | 0.630241 | 4_3:+21886767 | Msa0634560:CDS |
GTTTCTGTTGAGAAGATGAA+AGG | 0.632532 | 4_3:+21887991 | Msa0634560:CDS |
GCAATTGTATTGAGCCACAA+TGG | 0.634157 | 4_3:+21884645 | Msa0634560:CDS |
TGCTGAGCAACGTCTAATGG+TGG | 0.634295 | 4_3:+21885871 | Msa0634560:CDS |
AGTGCAATAATTGCATGCAT+CGG | 0.638531 | 4_3:-21885818 | None:intergenic |
CCACCACTGCAAAACATCAG+AGG | 0.648470 | 4_3:-21888274 | None:intergenic |
AGCTCCAACCCAGTACGTGT+CGG | 0.649105 | 4_3:-21885184 | None:intergenic |
TAGTAAAGTAATGCATGTGG+CGG | 0.650070 | 4_3:-21883447 | None:intergenic |
TCAAATATATGATTGGCCTG+AGG | 0.650243 | 4_3:+21885414 | Msa0634560:CDS |
GATTACGGCCGAATTGGCTG+AGG | 0.651356 | 4_3:+21884594 | Msa0634560:five_prime_UTR |
CAATCTTAGAAGAGTCGATG+AGG | 0.659708 | 4_3:+21885678 | Msa0634560:CDS |
GCGGGATCGAGAAATAAGCA+AGG | 0.660212 | 4_3:-21884721 | None:intergenic |
TAGGTACCGTATATCCAGCA+GGG | 0.660703 | 4_3:-21885237 | None:intergenic |
ATCCAAAACATCGTTGACGA+GGG | 0.663430 | 4_3:-21885927 | None:intergenic |
ACATGAGTTAGAGCTGGTCG+AGG | 0.664742 | 4_3:+21885504 | Msa0634560:CDS |
CGGGATCGAGAAATAAGCAA+GGG | 0.666665 | 4_3:-21884720 | None:intergenic |
AAATAGTAAAGTAATGCATG+TGG | 0.667110 | 4_3:-21883450 | None:intergenic |
AATCTTAGAAGAGTCGATGA+GGG | 0.669206 | 4_3:+21885679 | Msa0634560:CDS |
AGGCAGCATTTCCATCGCTG+TGG | 0.669524 | 4_3:+21886292 | Msa0634560:CDS |
GGCTATCACTTGGTACTGGT+AGG | 0.678294 | 4_3:-21886361 | None:intergenic |
AGTTCTACCGAGTTCAACAA+GGG | 0.685205 | 4_3:-21885131 | None:intergenic |
TGCTGCAAAATACATGCCTG+GGG | 0.686693 | 4_3:+21885348 | Msa0634560:CDS |
CACAATTCATACAAGAACCG+TGG | 0.691719 | 4_3:+21884862 | Msa0634560:CDS |
GAGGTCGTAATCTAGCAACT+GGG | 0.705400 | 4_3:-21885324 | None:intergenic |
CATCCATGACAAGAACCTTG+AGG | 0.710914 | 4_3:-21886913 | None:intergenic |
CATCTGATAGTGCTAGACAG+TGG | 0.733689 | 4_3:+21885476 | Msa0634560:CDS |
TAACAATCCAGACTCAACAG+TGG | 0.750275 | 4_3:-21888189 | None:intergenic |
GTTCCAGAGAAACAACACGC+AGG | 0.758519 | 4_3:-21887786 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GATTAAAAAAAGATTAAAAT+AGG | - | chr4_3:21883648-21883667 | None:intergenic | 10.0% |
!! | AAAACAAATTTACAAAAAAT+AGG | - | chr4_3:21883793-21883812 | None:intergenic | 10.0% |
!!! | TAGTATAAATTTAAACTTTT+AGG | + | chr4_3:21887469-21887488 | Msa0634560:intron | 10.0% |
!! | CTAAATTACATATACTAATT+TGG | + | chr4_3:21883865-21883884 | Msa0634560:intron | 15.0% |
!!! | TACAAATACTTTTCAAAATA+TGG | - | chr4_3:21884155-21884174 | None:intergenic | 15.0% |
!! | TTTGAAAATTAGAAAGATTT+AGG | - | chr4_3:21885399-21885418 | None:intergenic | 15.0% |
!!! | CTAATTTTCAAATATATGAT+TGG | + | chr4_3:21885407-21885426 | Msa0634560:CDS | 15.0% |
!!! | TTTTATAGAAAAGTAAACTT+AGG | + | chr4_3:21887002-21887021 | Msa0634560:intron | 15.0% |
!!! | TTTTTAAAACATTGCTTTTA+GGG | - | chr4_3:21887184-21887203 | None:intergenic | 15.0% |
!! | AAATTGTCAAATAAAAATTC+AGG | - | chr4_3:21887503-21887522 | None:intergenic | 15.0% |
!!! | ATTATGTATATTTTCTTTTC+TGG | - | chr4_3:21887553-21887572 | None:intergenic | 15.0% |
!! | TAGAGTTTATACAATTAAAG+AGG | - | chr4_3:21883714-21883733 | None:intergenic | 20.0% |
!! | GGTGAATCAAATATAATTAT+GGG | - | chr4_3:21883772-21883791 | None:intergenic | 20.0% |
!! | AGGTGAATCAAATATAATTA+TGG | - | chr4_3:21883773-21883792 | None:intergenic | 20.0% |
!! | CATGTAGTTATAATTAGTAA+AGG | + | chr4_3:21883826-21883845 | Msa0634560:intron | 20.0% |
!! | TATGAGAATTGTTTAATAGA+AGG | + | chr4_3:21884075-21884094 | Msa0634560:intron | 20.0% |
!! | ATGAGAATTGTTTAATAGAA+GGG | + | chr4_3:21884076-21884095 | Msa0634560:intron | 20.0% |
!! | TAACAATTGAACATTAAGAA+CGG | - | chr4_3:21884472-21884491 | None:intergenic | 20.0% |
!! | TTAATGTAGTTATGTGATTA+CGG | + | chr4_3:21884579-21884598 | Msa0634560:intron | 20.0% |
!! | CAACACATCTAATAAATTTA+TGG | + | chr4_3:21884834-21884853 | Msa0634560:CDS | 20.0% |
!! | AATAATATGTACAAGCATAA+GGG | - | chr4_3:21884942-21884961 | None:intergenic | 20.0% |
!!! | AGTTTTAACACTTAATAGAT+CGG | - | chr4_3:21884966-21884985 | None:intergenic | 20.0% |
!!! | AGAATTATTTTTGAAGAACA+AGG | + | chr4_3:21884988-21885007 | Msa0634560:CDS | 20.0% |
!!! | ACTAATATAGTTGAACTTTT+CGG | - | chr4_3:21886045-21886064 | None:intergenic | 20.0% |
!!! | TTACTAATTTTCTTCTGTTT+TGG | + | chr4_3:21886421-21886440 | Msa0634560:intron | 20.0% |
!!! | TAATTTGTTCTCTTCAATAT+TGG | + | chr4_3:21886672-21886691 | Msa0634560:intron | 20.0% |
!! | TGATGTATATAGATTTACTT+TGG | - | chr4_3:21887128-21887147 | None:intergenic | 20.0% |
!! | AAGTAAATCTATATACATCA+AGG | + | chr4_3:21887128-21887147 | Msa0634560:intron | 20.0% |
!!! | GTTTTTAAAACATTGCTTTT+AGG | - | chr4_3:21887185-21887204 | None:intergenic | 20.0% |
!!! | AAATTTAAACTTTTAGGTGA+AGG | + | chr4_3:21887475-21887494 | Msa0634560:intron | 20.0% |
!!! | ACAACAAAAGTTTTCATAAT+AGG | - | chr4_3:21888082-21888101 | None:intergenic | 20.0% |
! | AAATAGTAAAGTAATGCATG+TGG | - | chr4_3:21883453-21883472 | None:intergenic | 25.0% |
! | GAATAATAGAAGAAAACTGA+AGG | - | chr4_3:21883578-21883597 | None:intergenic | 25.0% |
! | AGTTTATACAATTAAAGAGG+AGG | - | chr4_3:21883711-21883730 | None:intergenic | 25.0% |
!! | TCTTAGCAATTTTCTATGAT+TGG | + | chr4_3:21883912-21883931 | Msa0634560:intron | 25.0% |
!! | CTTAGCAATTTTCTATGATT+GGG | + | chr4_3:21883913-21883932 | Msa0634560:intron | 25.0% |
!! | TTGATAGCTGTATGAAATTA+TGG | + | chr4_3:21883950-21883969 | Msa0634560:intron | 25.0% |
! | TGATAGCTGTATGAAATTAT+GGG | + | chr4_3:21883951-21883970 | Msa0634560:intron | 25.0% |
!!! | GGGTAAGTTTTTTATTTCTA+TGG | + | chr4_3:21884096-21884115 | Msa0634560:intron | 25.0% |
! | TGATAATTGCATTAACCTAT+TGG | + | chr4_3:21884273-21884292 | Msa0634560:intron | 25.0% |
!! | AAAATTAAAGCATCAGACAT+GGG | - | chr4_3:21884552-21884571 | None:intergenic | 25.0% |
!! | TAAAATTAAAGCATCAGACA+TGG | - | chr4_3:21884553-21884572 | None:intergenic | 25.0% |
! | TGAAGAAATCTGATATGTAT+TGG | - | chr4_3:21884697-21884716 | None:intergenic | 25.0% |
! | GAATAATATGTACAAGCATA+AGG | - | chr4_3:21884943-21884962 | None:intergenic | 25.0% |
!!! | GTTTTAACACTTAATAGATC+GGG | - | chr4_3:21884965-21884984 | None:intergenic | 25.0% |
! | TTGATCACAGGAAAATTAAT+AGG | - | chr4_3:21885259-21885278 | None:intergenic | 25.0% |
! | AAATTAGAAAGATTTAGGAG+AGG | - | chr4_3:21885394-21885413 | None:intergenic | 25.0% |
! | ACAAAGGAAACTGAATAAAA+TGG | - | chr4_3:21885556-21885575 | None:intergenic | 25.0% |
!! | CTAATATAGTTGAACTTTTC+GGG | - | chr4_3:21886044-21886063 | None:intergenic | 25.0% |
!!! | TATTTTGTTTTCCACGTTAT+AGG | + | chr4_3:21886484-21886503 | Msa0634560:intron | 25.0% |
! | CAAACTTAGTGAATAACTTT+GGG | - | chr4_3:21886547-21886566 | None:intergenic | 25.0% |
!!! | GATTTTTTGTTGCTAATGTT+TGG | - | chr4_3:21886577-21886596 | None:intergenic | 25.0% |
! | TAAGGTAGTTTATGTTCAAT+TGG | - | chr4_3:21886848-21886867 | None:intergenic | 25.0% |
! | ATGCTTTCAAGAATATCATT+AGG | - | chr4_3:21887062-21887081 | None:intergenic | 25.0% |
! | TTCTTTAAACAGTTAGAACA+CGG | - | chr4_3:21887269-21887288 | None:intergenic | 25.0% |
!! | TAAGTCTTTTCATAGTAAGT+GGG | - | chr4_3:21887399-21887418 | None:intergenic | 25.0% |
! | ACTAGAAATATTCCTTGATA+TGG | - | chr4_3:21887453-21887472 | None:intergenic | 25.0% |
! | ATTAGATGGTTATGAATTAG+CGG | + | chr4_3:21887840-21887859 | Msa0634560:CDS | 25.0% |
! | ATGAACTTTGTTCACAAAAA+TGG | - | chr4_3:21888218-21888237 | None:intergenic | 25.0% |
TTATACAATTAAAGAGGAGG+TGG | - | chr4_3:21883708-21883727 | None:intergenic | 30.0% | |
! | TTAGTAAAGGCTAGAGTATT+AGG | + | chr4_3:21883839-21883858 | Msa0634560:intron | 30.0% |
! | AATTATGGGTGTGATGATTT+TGG | + | chr4_3:21883965-21883984 | Msa0634560:intron | 30.0% |
! | ATTATGGGTGTGATGATTTT+GGG | + | chr4_3:21883966-21883985 | Msa0634560:intron | 30.0% |
GTTAATAATAGACACTGTGT+TGG | + | chr4_3:21884049-21884068 | Msa0634560:intron | 30.0% | |
ATTTCTATGGTAGTTCTTTG+TGG | + | chr4_3:21884109-21884128 | Msa0634560:intron | 30.0% | |
ACTAAAACTCGTTAACCAAT+AGG | - | chr4_3:21884291-21884310 | None:intergenic | 30.0% | |
!! | TGGTTAACGAGTTTTAGTAA+AGG | + | chr4_3:21884293-21884312 | Msa0634560:intron | 30.0% |
TTCATCAATAAATCATCTGC+TGG | - | chr4_3:21884671-21884690 | None:intergenic | 30.0% | |
TGCAGTATTTCCATATAGAT+GGG | + | chr4_3:21884772-21884791 | Msa0634560:CDS | 30.0% | |
!!! | TCGATGAAATTTTAACTGCA+CGG | - | chr4_3:21885300-21885319 | None:intergenic | 30.0% |
TGTAAAGAAATACGCTACAA+AGG | - | chr4_3:21885572-21885591 | None:intergenic | 30.0% | |
AGGTCCATGTAAAAGAATAT+CGG | - | chr4_3:21885620-21885639 | None:intergenic | 30.0% | |
CAACAGGTTTAATCAAGTTA+AGG | - | chr4_3:21886142-21886161 | None:intergenic | 30.0% | |
CAAATTCTTCTCAATGTTGT+TGG | + | chr4_3:21886245-21886264 | Msa0634560:CDS | 30.0% | |
AATCAGGAAATCTAATATCC+CGG | - | chr4_3:21886340-21886359 | None:intergenic | 30.0% | |
AAATAAAAGTGGCTATCACT+TGG | - | chr4_3:21886374-21886393 | None:intergenic | 30.0% | |
! | TGAATCTTTTACCTATAACG+TGG | - | chr4_3:21886498-21886517 | None:intergenic | 30.0% |
ACGTTATAGGTAAAAGATTC+AGG | + | chr4_3:21886497-21886516 | Msa0634560:intron | 30.0% | |
GCAAACTTAGTGAATAACTT+TGG | - | chr4_3:21886548-21886567 | None:intergenic | 30.0% | |
GTAGTTTATGTTCAATTGGA+CGG | - | chr4_3:21886844-21886863 | None:intergenic | 30.0% | |
TTCTTGTCATGGATGATAAT+GGG | + | chr4_3:21886921-21886940 | Msa0634560:CDS | 30.0% | |
AAATTTCACAACTGAAGGTA+CGG | - | chr4_3:21886965-21886984 | None:intergenic | 30.0% | |
GTAACAAATTTCACAACTGA+AGG | - | chr4_3:21886970-21886989 | None:intergenic | 30.0% | |
!! | GTGAAATTTGTTACTATGTC+TGG | + | chr4_3:21886976-21886995 | Msa0634560:intron | 30.0% |
AATGCTGTTCACAATTTAAC+AGG | + | chr4_3:21887301-21887320 | Msa0634560:intron | 30.0% | |
! | AAGTCTTTTCATAGTAAGTG+GGG | - | chr4_3:21887398-21887417 | None:intergenic | 30.0% |
! | GTAAGTCTTTTCATAGTAAG+TGG | - | chr4_3:21887400-21887419 | None:intergenic | 30.0% |
CTTACTATGAAAAGACTTAC+TGG | + | chr4_3:21887400-21887419 | Msa0634560:intron | 30.0% | |
! | CAAGCTTTAATACCATATCA+AGG | + | chr4_3:21887438-21887457 | Msa0634560:intron | 30.0% |
AAGTCAGATGAATTGTTTAG+TGG | + | chr4_3:21887616-21887635 | Msa0634560:intron | 30.0% | |
TTGTGAACTTCTCTTGTATA+CGG | - | chr4_3:21887867-21887886 | None:intergenic | 30.0% | |
! | AACAAAGCACTCACATAAAA+AGG | + | chr4_3:21888148-21888167 | Msa0634560:three_prime_UTR | 30.0% |
! | ACTCACATAAAAAGGTGTAA+AGG | + | chr4_3:21888156-21888175 | Msa0634560:three_prime_UTR | 30.0% |
CAAGTTCAATGAATTTGGGT+GGG | - | chr4_3:21883426-21883445 | None:intergenic | 35.0% | |
TCAAGTTCAATGAATTTGGG+TGG | - | chr4_3:21883427-21883446 | None:intergenic | 35.0% | |
CGGTCAAGTTCAATGAATTT+GGG | - | chr4_3:21883430-21883449 | None:intergenic | 35.0% | |
TAGTAAAGTAATGCATGTGG+CGG | - | chr4_3:21883450-21883469 | None:intergenic | 35.0% | |
GTGTGATCTTGAAACTTACA+TGG | - | chr4_3:21883626-21883645 | None:intergenic | 35.0% | |
! | TTATGGGTGTGATGATTTTG+GGG | + | chr4_3:21883967-21883986 | Msa0634560:intron | 35.0% |
TGGTAGTTCTTTGTGGTAAT+TGG | + | chr4_3:21884116-21884135 | Msa0634560:intron | 35.0% | |
GGTAGTTCTTTGTGGTAATT+GGG | + | chr4_3:21884117-21884136 | Msa0634560:intron | 35.0% | |
!!! | TCACTGGTTTTGTAGTTCTA+TGG | + | chr4_3:21884223-21884242 | Msa0634560:intron | 35.0% |
TAAACTGTTCCACACAAAGT+TGG | - | chr4_3:21884345-21884364 | None:intergenic | 35.0% | |
CTTACATTTCAGTCAAACTC+CGG | + | chr4_3:21884365-21884384 | Msa0634560:intron | 35.0% | |
!! | AACTGGTGCTACAAGTTATT+AGG | + | chr4_3:21884423-21884442 | Msa0634560:intron | 35.0% |
GTGGTTCAATTCAATCATGA+TGG | + | chr4_3:21884616-21884635 | Msa0634560:exon | 35.0% | |
CTGCAGTATTTCCATATAGA+TGG | + | chr4_3:21884771-21884790 | Msa0634560:CDS | 35.0% | |
GGTTCTTGTATGAATTGTGA+AGG | - | chr4_3:21884861-21884880 | None:intergenic | 35.0% | |
!! | ATTTTTGAAGAACAAGGCTG+CGG | + | chr4_3:21884994-21885013 | Msa0634560:CDS | 35.0% |
!! | TCAAATATATGATTGGCCTG+AGG | + | chr4_3:21885414-21885433 | Msa0634560:CDS | 35.0% |
AACTAGAAGCTATGCTTTGA+TGG | + | chr4_3:21885441-21885460 | Msa0634560:CDS | 35.0% | |
! | TCGACCGATATTCTTTTACA+TGG | + | chr4_3:21885613-21885632 | Msa0634560:intron | 35.0% |
AATCTTAGAAGAGTCGATGA+GGG | + | chr4_3:21885679-21885698 | Msa0634560:CDS | 35.0% | |
AGTGCAATAATTGCATGCAT+CGG | - | chr4_3:21885821-21885840 | None:intergenic | 35.0% | |
!! | ACGATGTTTTGGATCTTTCA+CGG | + | chr4_3:21885936-21885955 | Msa0634560:CDS | 35.0% |
!! | AGTTGAACTTTTCGGGATTT+AGG | - | chr4_3:21886037-21886056 | None:intergenic | 35.0% |
CTCAAAGATCATAAGCTACT+AGG | - | chr4_3:21886071-21886090 | None:intergenic | 35.0% | |
!! | AGACTTGTTATTCTGATTGC+AGG | + | chr4_3:21886115-21886134 | Msa0634560:intron | 35.0% |
! | AGCTTTTTAACAGATGCAAC+AGG | - | chr4_3:21886158-21886177 | None:intergenic | 35.0% |
GCTGTTAAGTTCACAAAAGA+AGG | + | chr4_3:21886272-21886291 | Msa0634560:CDS | 35.0% | |
TAGGTAAAAGATTCAGGATC+AGG | + | chr4_3:21886503-21886522 | Msa0634560:intron | 35.0% | |
!! | AATAACTTTGGGATGTCTTG+TGG | - | chr4_3:21886536-21886555 | None:intergenic | 35.0% |
TTAGCAACAAAAAATCCCGT+TGG | + | chr4_3:21886581-21886600 | Msa0634560:CDS | 35.0% | |
TTGGGCTTGCAATTTGTAAA+AGG | + | chr4_3:21886612-21886631 | Msa0634560:CDS | 35.0% | |
!! | GATTTTCTATTGATTGCGTC+CGG | + | chr4_3:21886702-21886721 | Msa0634560:intron | 35.0% |
TGCTCACAGATTAAAGATAC+CGG | - | chr4_3:21886724-21886743 | None:intergenic | 35.0% | |
ATCTCATGGAAGGACATATT+TGG | + | chr4_3:21886753-21886772 | Msa0634560:CDS | 35.0% | |
CATATTTGGATTGAAAGCGA+AGG | + | chr4_3:21886767-21886786 | Msa0634560:CDS | 35.0% | |
! | GCCACTTTCATTGTAAAACT+CGG | + | chr4_3:21886809-21886828 | Msa0634560:CDS | 35.0% |
! | TCCGAGTTTTACAATGAAAG+TGG | - | chr4_3:21886813-21886832 | None:intergenic | 35.0% |
!! | ACTAGAGCTTTAGGTTTGTA+AGG | - | chr4_3:21886866-21886885 | None:intergenic | 35.0% |
CCATGATTTACTAGAGCTTT+AGG | - | chr4_3:21886875-21886894 | None:intergenic | 35.0% | |
! | CCTAAAGCTCTAGTAAATCA+TGG | + | chr4_3:21886872-21886891 | Msa0634560:CDS | 35.0% |
CATGGATCTACAAACATTTC+CGG | + | chr4_3:21886890-21886909 | Msa0634560:CDS | 35.0% | |
GTTCTTGTCATGGATGATAA+TGG | + | chr4_3:21886920-21886939 | Msa0634560:CDS | 35.0% | |
TGCAATAAACCACTCAAACT+GGG | + | chr4_3:21887237-21887256 | Msa0634560:intron | 35.0% | |
AAGGACTATGAAAAGCAAAC+CGG | - | chr4_3:21887336-21887355 | None:intergenic | 35.0% | |
!! | TTGCTTTTCATAGTCCTTGA+TGG | + | chr4_3:21887338-21887357 | Msa0634560:intron | 35.0% |
! | TGCTTTTCATAGTCCTTGAT+GGG | + | chr4_3:21887339-21887358 | Msa0634560:intron | 35.0% |
AAAACCATAATGTCCCATCA+AGG | - | chr4_3:21887355-21887374 | None:intergenic | 35.0% | |
ACTATGAAAAGACTTACTGG+TGG | + | chr4_3:21887403-21887422 | Msa0634560:intron | 35.0% | |
CTTCTACTTGCAATCTAACT+TGG | + | chr4_3:21887593-21887612 | Msa0634560:intron | 35.0% | |
ATCAGTTATGAGACAAGCAA+GGG | - | chr4_3:21887669-21887688 | None:intergenic | 35.0% | |
ATGGTGAAACTTGTAATGCA+GGG | + | chr4_3:21887687-21887706 | Msa0634560:intron | 35.0% | |
AAGGGACTTCTTATCCATTT+AGG | + | chr4_3:21887727-21887746 | Msa0634560:CDS | 35.0% | |
GTCTTTATGGATGTTTGTAC+AGG | + | chr4_3:21887817-21887836 | Msa0634560:CDS | 35.0% | |
GATGTTTGTACAGGATTAGA+TGG | + | chr4_3:21887826-21887845 | Msa0634560:CDS | 35.0% | |
! | GGTCAACTTGTTTGTATTTC+CGG | - | chr4_3:21887923-21887942 | None:intergenic | 35.0% |
TTCATCTTCTCAACAGAAAC+AGG | - | chr4_3:21887991-21888010 | None:intergenic | 35.0% | |
GTTTCTGTTGAGAAGATGAA+AGG | + | chr4_3:21887991-21888010 | Msa0634560:CDS | 35.0% | |
!!! | AGGTGTTTTAACAGAACTCT+TGG | + | chr4_3:21888011-21888030 | Msa0634560:CDS | 35.0% |
! | TTTTGTGTCTCTGTCAGATG+CGG | + | chr4_3:21883384-21883403 | Msa0634560:five_prime_UTR | 40.0% |
GCGGTCAAGTTCAATGAATT+TGG | - | chr4_3:21883431-21883450 | None:intergenic | 40.0% | |
AAAGGAACGAATAGTGTTGC+AGG | - | chr4_3:21883544-21883563 | None:intergenic | 40.0% | |
AGAAAACTGAAGGAAGAGAC+AGG | - | chr4_3:21883568-21883587 | None:intergenic | 40.0% | |
! | TATGGGTGTGATGATTTTGG+GGG | + | chr4_3:21883968-21883987 | Msa0634560:intron | 40.0% |
TTTGTGGTAATTGGGTGTAG+AGG | + | chr4_3:21884125-21884144 | Msa0634560:intron | 40.0% | |
TGAGATGAGATTGTCTTCAC+TGG | + | chr4_3:21884207-21884226 | Msa0634560:intron | 40.0% | |
TATGGTCACGATTGTTTCGA+GGG | + | chr4_3:21884241-21884260 | Msa0634560:intron | 40.0% | |
! | ATTCGAGTTCCAACTTTGTG+TGG | + | chr4_3:21884333-21884352 | Msa0634560:intron | 40.0% |
!! | TGGTGCTACAAGTTATTAGG+AGG | + | chr4_3:21884426-21884445 | Msa0634560:intron | 40.0% |
! | GGTGCTACAAGTTATTAGGA+GGG | + | chr4_3:21884427-21884446 | Msa0634560:intron | 40.0% |
! | AAAGCATCAGACATGGGAAA+TGG | - | chr4_3:21884546-21884565 | None:intergenic | 40.0% |
TTATGTGATTACGGCCGAAT+TGG | + | chr4_3:21884588-21884607 | Msa0634560:five_prime_UTR | 40.0% | |
TTGTGGCTCAATACAATTGC+AGG | - | chr4_3:21884645-21884664 | None:intergenic | 40.0% | |
GCAATTGTATTGAGCCACAA+TGG | + | chr4_3:21884645-21884664 | Msa0634560:CDS | 40.0% | |
ACAAAGTAGATAAGCTCGAG+CGG | - | chr4_3:21884743-21884762 | None:intergenic | 40.0% | |
TGAACAAGGACCCATCTATA+TGG | - | chr4_3:21884785-21884804 | None:intergenic | 40.0% | |
TGCTCCACATAGAACTATGA+AGG | - | chr4_3:21884816-21884835 | None:intergenic | 40.0% | |
CACAATTCATACAAGAACCG+TGG | + | chr4_3:21884862-21884881 | Msa0634560:CDS | 40.0% | |
TACGACAGCAGTTAAAACCT+TGG | - | chr4_3:21884906-21884925 | None:intergenic | 40.0% | |
AAGAAACTGGTCGACATGTT+AGG | + | chr4_3:21885053-21885072 | Msa0634560:CDS | 40.0% | |
AAAACGACCCTTGTTGAACT+CGG | + | chr4_3:21885124-21885143 | Msa0634560:CDS | 40.0% | |
AGTTCTACCGAGTTCAACAA+GGG | - | chr4_3:21885134-21885153 | None:intergenic | 40.0% | |
TTGAACTCGGTAGAACTCTT+GGG | + | chr4_3:21885137-21885156 | Msa0634560:CDS | 40.0% | |
CTAAATACGTGGTTGATCAC+AGG | - | chr4_3:21885271-21885290 | None:intergenic | 40.0% | |
ATGCTGCAAAATACATGCCT+GGG | + | chr4_3:21885347-21885366 | Msa0634560:CDS | 40.0% | |
! | TAGCTTCTAGTTGAAACCTC+AGG | - | chr4_3:21885433-21885452 | None:intergenic | 40.0% |
CAATCTTAGAAGAGTCGATG+AGG | + | chr4_3:21885678-21885697 | Msa0634560:CDS | 40.0% | |
GCAGAATGTTGCACTTGATA+TGG | + | chr4_3:21885721-21885740 | Msa0634560:CDS | 40.0% | |
! | TCATGCTCGCAATGACTTTT+TGG | + | chr4_3:21885769-21885788 | Msa0634560:CDS | 40.0% |
ATCCAAAACATCGTTGACGA+GGG | - | chr4_3:21885930-21885949 | None:intergenic | 40.0% | |
CCTCTCTAAACAACGAATGA+AGG | - | chr4_3:21886003-21886022 | None:intergenic | 40.0% | |
CCTTCATTCGTTGTTTAGAG+AGG | + | chr4_3:21886000-21886019 | Msa0634560:CDS | 40.0% | |
ACATTTCGCATCAGATTTGC+CGG | + | chr4_3:21886190-21886209 | Msa0634560:CDS | 40.0% | |
TTGTAAAGCCTGAATCCTTC+CGG | + | chr4_3:21886318-21886337 | Msa0634560:CDS | 40.0% | |
AGGAAATCTAATATCCCGGA+AGG | - | chr4_3:21886336-21886355 | None:intergenic | 40.0% | |
CCTGTACTCGCAAATAAAAG+TGG | - | chr4_3:21886385-21886404 | None:intergenic | 40.0% | |
!! | CCACTTTTATTTGCGAGTAC+AGG | + | chr4_3:21886382-21886401 | Msa0634560:CDS | 40.0% |
CGTCTGTTATCTGATTTCGA+AGG | + | chr4_3:21886454-21886473 | Msa0634560:intron | 40.0% | |
CTGTTATCTGATTTCGAAGG+TGG | + | chr4_3:21886457-21886476 | Msa0634560:intron | 40.0% | |
ACAAAAAATCCCGTTGGAAG+TGG | + | chr4_3:21886587-21886606 | Msa0634560:CDS | 40.0% | |
CAAAAAATCCCGTTGGAAGT+GGG | + | chr4_3:21886588-21886607 | Msa0634560:CDS | 40.0% | |
GGTATCTTTAATCTGTGAGC+AGG | + | chr4_3:21886723-21886742 | Msa0634560:intron | 40.0% | |
AGGTTTGTGAATCTCATGGA+AGG | + | chr4_3:21886743-21886762 | Msa0634560:intron | 40.0% | |
! | TGGATTGAAAGCGAAGGTAT+TGG | + | chr4_3:21886773-21886792 | Msa0634560:CDS | 40.0% |
!! | GAAAGCGAAGGTATTGGTAA+AGG | + | chr4_3:21886779-21886798 | Msa0634560:CDS | 40.0% |
CATTGTAAAACTCGGAATCC+CGG | + | chr4_3:21886817-21886836 | Msa0634560:CDS | 40.0% | |
TTATGTTCAATTGGACGGTC+CGG | - | chr4_3:21886839-21886858 | None:intergenic | 40.0% | |
ATCATTAGGACCCAAGAAGT+CGG | - | chr4_3:21887048-21887067 | None:intergenic | 40.0% | |
ACTGAATCAGAGAGACATCT+TGG | + | chr4_3:21887203-21887222 | Msa0634560:intron | 40.0% | |
CTGCAATAAACCACTCAAAC+TGG | + | chr4_3:21887236-21887255 | Msa0634560:intron | 40.0% | |
ATTTAACAGGCTGAACTGTC+CGG | + | chr4_3:21887314-21887333 | Msa0634560:intron | 40.0% | |
TAGTCCTTGATGGGACATTA+TGG | + | chr4_3:21887348-21887367 | Msa0634560:intron | 40.0% | |
AAAGACTTACTGGTGGTTGT+TGG | + | chr4_3:21887410-21887429 | Msa0634560:intron | 40.0% | |
CATCAGTTATGAGACAAGCA+AGG | - | chr4_3:21887670-21887689 | None:intergenic | 40.0% | |
CTTGCTTGTCTCATAACTGA+TGG | + | chr4_3:21887668-21887687 | Msa0634560:intron | 40.0% | |
GATGGTGAAACTTGTAATGC+AGG | + | chr4_3:21887686-21887705 | Msa0634560:intron | 40.0% | |
TTGTGACATCGCATCCTAAA+TGG | - | chr4_3:21887744-21887763 | None:intergenic | 40.0% | |
GGAACACAAAGTCGTCTTTA+TGG | + | chr4_3:21887804-21887823 | Msa0634560:CDS | 40.0% | |
CCACTTATAGTTGCTCTTAC+CGG | + | chr4_3:21887901-21887920 | Msa0634560:CDS | 40.0% | |
AGCTCTCAAACAGTTCTCTT+TGG | - | chr4_3:21887944-21887963 | None:intergenic | 40.0% | |
AAAGAGAACTGTTTGAGAGC+TGG | + | chr4_3:21887943-21887962 | Msa0634560:CDS | 40.0% | |
TGTTTGAGAGCTGGTGTAAA+TGG | + | chr4_3:21887952-21887971 | Msa0634560:CDS | 40.0% | |
TAACAATCCAGACTCAACAG+TGG | - | chr4_3:21888192-21888211 | None:intergenic | 40.0% | |
GAATTTGGGTGGGTCGAAAA+GGG | - | chr4_3:21883416-21883435 | None:intergenic | 45.0% | |
TGAATTTGGGTGGGTCGAAA+AGG | - | chr4_3:21883417-21883436 | None:intergenic | 45.0% | |
CTGAAGGAAGAGACAGGAAA+AGG | - | chr4_3:21883562-21883581 | None:intergenic | 45.0% | |
! | ATGGGTGTGATGATTTTGGG+GGG | + | chr4_3:21883969-21883988 | Msa0634560:intron | 45.0% |
TTGGGGGGTTTAGTTAGCAA+TGG | + | chr4_3:21883984-21884003 | Msa0634560:intron | 45.0% | |
TGGGGGGTTTAGTTAGCAAT+GGG | + | chr4_3:21883985-21884004 | Msa0634560:intron | 45.0% | |
CTATGGTCACGATTGTTTCG+AGG | + | chr4_3:21884240-21884259 | Msa0634560:intron | 45.0% | |
AGTCAAACTCCGGATTACCA+GGG | + | chr4_3:21884375-21884394 | Msa0634560:intron | 45.0% | |
CAGTTAATCCACCAGTTTCC+GGG | - | chr4_3:21884408-21884427 | None:intergenic | 45.0% | |
CCAGTTAATCCACCAGTTTC+CGG | - | chr4_3:21884409-21884428 | None:intergenic | 45.0% | |
TTGAACCACCTCAGCCAATT+CGG | - | chr4_3:21884605-21884624 | None:intergenic | 45.0% | |
AAATCATCTGCTGGCCATTG+TGG | - | chr4_3:21884662-21884681 | None:intergenic | 45.0% | |
CGGGATCGAGAAATAAGCAA+GGG | - | chr4_3:21884723-21884742 | None:intergenic | 45.0% | |
CAAAGTAGATAAGCTCGAGC+GGG | - | chr4_3:21884742-21884761 | None:intergenic | 45.0% | |
AGATGGGTCCTTGTTCAGTT+TGG | + | chr4_3:21884788-21884807 | Msa0634560:CDS | 45.0% | |
!! | TGAAGGCACCAAACTGAACA+AGG | - | chr4_3:21884799-21884818 | None:intergenic | 45.0% |
! | GGTGCCTTCATAGTTCTATG+TGG | + | chr4_3:21884809-21884828 | Msa0634560:CDS | 45.0% |
GGTGGTCATTACAATTGCCA+CGG | - | chr4_3:21884882-21884901 | None:intergenic | 45.0% | |
AATTGTAATGACCACCGCCA+AGG | + | chr4_3:21884886-21884905 | Msa0634560:CDS | 45.0% | |
GACAGCAGTTAAAACCTTGG+CGG | - | chr4_3:21884903-21884922 | None:intergenic | 45.0% | |
ATGTACAAGCATAAGGGCAG+TGG | - | chr4_3:21884936-21884955 | None:intergenic | 45.0% | |
TGCGGAGCTTGATAGAGAAA+TGG | + | chr4_3:21885012-21885031 | Msa0634560:CDS | 45.0% | |
GCGGAGCTTGATAGAGAAAT+GGG | + | chr4_3:21885013-21885032 | Msa0634560:CDS | 45.0% | |
ATTCGTACGCAGGAAGAAAC+TGG | + | chr4_3:21885040-21885059 | Msa0634560:CDS | 45.0% | |
GAGTTCTACCGAGTTCAACA+AGG | - | chr4_3:21885135-21885154 | None:intergenic | 45.0% | |
GTTGAACTCGGTAGAACTCT+TGG | + | chr4_3:21885136-21885155 | Msa0634560:CDS | 45.0% | |
GGTTAGAGGAATGTGCGTTA+TGG | + | chr4_3:21885158-21885177 | Msa0634560:CDS | 45.0% | |
! | TAGGTACCGTATATCCAGCA+GGG | - | chr4_3:21885240-21885259 | None:intergenic | 45.0% |
! | ATAGGTACCGTATATCCAGC+AGG | - | chr4_3:21885241-21885260 | None:intergenic | 45.0% |
CACGGTTGCTACTAAATACG+TGG | - | chr4_3:21885282-21885301 | None:intergenic | 45.0% | |
GAGGTCGTAATCTAGCAACT+GGG | - | chr4_3:21885327-21885346 | None:intergenic | 45.0% | |
TGAGGTCGTAATCTAGCAAC+TGG | - | chr4_3:21885328-21885347 | None:intergenic | 45.0% | |
! | GGCATGTATTTTGCAGCATG+AGG | - | chr4_3:21885346-21885365 | None:intergenic | 45.0% |
CATGCTGCAAAATACATGCC+TGG | + | chr4_3:21885346-21885365 | Msa0634560:CDS | 45.0% | |
TGCTGCAAAATACATGCCTG+GGG | + | chr4_3:21885348-21885367 | Msa0634560:CDS | 45.0% | |
CACTGTCTAGCACTATCAGA+TGG | - | chr4_3:21885478-21885497 | None:intergenic | 45.0% | |
! | CATCTGATAGTGCTAGACAG+TGG | + | chr4_3:21885476-21885495 | Msa0634560:CDS | 45.0% |
GCATGTACATGAGTTAGAGC+TGG | + | chr4_3:21885498-21885517 | Msa0634560:CDS | 45.0% | |
!!! | CATGGACCTGTTTTTACACC+AGG | + | chr4_3:21885631-21885650 | Msa0634560:intron | 45.0% |
CAGCTACCTGGTGTAAAAAC+AGG | - | chr4_3:21885640-21885659 | None:intergenic | 45.0% | |
TGCACTCTCTTCATTGATGC+AGG | + | chr4_3:21885835-21885854 | Msa0634560:CDS | 45.0% | |
! | TACCCTCGTCAACGATGTTT+TGG | + | chr4_3:21885925-21885944 | Msa0634560:CDS | 45.0% |
GATCCAAAACATCGTTGACG+AGG | - | chr4_3:21885931-21885950 | None:intergenic | 45.0% | |
GATCTTTCACGGCTTGAAGA+TGG | + | chr4_3:21885947-21885966 | Msa0634560:CDS | 45.0% | |
CTTTACAACAACCACAGCGA+TGG | - | chr4_3:21886306-21886325 | None:intergenic | 45.0% | |
TGTAAAGCCTGAATCCTTCC+GGG | + | chr4_3:21886319-21886338 | Msa0634560:CDS | 45.0% | |
CTAATATCCCGGAAGGATTC+AGG | - | chr4_3:21886329-21886348 | None:intergenic | 45.0% | |
!! | CTTGGTACTGGTAGGAAATC+AGG | - | chr4_3:21886356-21886375 | None:intergenic | 45.0% |
AAGTGGCTATCACTTGGTAC+TGG | - | chr4_3:21886368-21886387 | None:intergenic | 45.0% | |
GAGCAGGTTTGTGAATCTCA+TGG | + | chr4_3:21886739-21886758 | Msa0634560:intron | 45.0% | |
TATGTTCAATTGGACGGTCC+GGG | - | chr4_3:21886838-21886857 | None:intergenic | 45.0% | |
TACAAACATTTCCGGCCTCA+AGG | + | chr4_3:21886898-21886917 | Msa0634560:CDS | 45.0% | |
CATCCATGACAAGAACCTTG+AGG | - | chr4_3:21886916-21886935 | None:intergenic | 45.0% | |
TACTTTAAGCCCCGACTTCT+TGG | + | chr4_3:21887034-21887053 | Msa0634560:intron | 45.0% | |
ACTTTAAGCCCCGACTTCTT+GGG | + | chr4_3:21887035-21887054 | Msa0634560:intron | 45.0% | |
TCATTAGGACCCAAGAAGTC+GGG | - | chr4_3:21887047-21887066 | None:intergenic | 45.0% | |
TCAGAGAGACATCTTGGTCA+TGG | + | chr4_3:21887209-21887228 | Msa0634560:intron | 45.0% | |
CCGGTAAGAGCAACTATAAG+TGG | - | chr4_3:21887904-21887923 | None:intergenic | 45.0% | |
TAACAGAACTCTTGGAGCGT+CGG | + | chr4_3:21888019-21888038 | Msa0634560:CDS | 45.0% | |
! | AAAGGTGTAAAGGAAGCCCT+AGG | + | chr4_3:21888166-21888185 | Msa0634560:three_prime_UTR | 45.0% |
! | AGACCTCTGATGTTTTGCAG+TGG | + | chr4_3:21888271-21888290 | Msa0634560:three_prime_UTR | 45.0% |
CAGTCAAACTCCGGATTACC+AGG | + | chr4_3:21884374-21884393 | Msa0634560:intron | 50.0% | |
!! | CCGGAAACTGGTGGATTAAC+TGG | + | chr4_3:21884406-21884425 | Msa0634560:intron | 50.0% |
GCGGGATCGAGAAATAAGCA+AGG | - | chr4_3:21884724-21884743 | None:intergenic | 50.0% | |
AGCAGTTAAAACCTTGGCGG+TGG | - | chr4_3:21884900-21884919 | None:intergenic | 50.0% | |
! | AATGGGCTTGATTCGTACGC+AGG | + | chr4_3:21885030-21885049 | Msa0634560:CDS | 50.0% |
! | CGGTAGAACTCTTGGGTTAG+AGG | + | chr4_3:21885144-21885163 | Msa0634560:CDS | 50.0% |
TTATGGATGCCGACACGTAC+TGG | + | chr4_3:21885175-21885194 | Msa0634560:CDS | 50.0% | |
TATGGATGCCGACACGTACT+GGG | + | chr4_3:21885176-21885195 | Msa0634560:CDS | 50.0% | |
GCAGAACCCTGCTGGATATA+CGG | + | chr4_3:21885231-21885250 | Msa0634560:CDS | 50.0% | |
! | CTGGGGCAGTAGTTGCTATT+CGG | + | chr4_3:21885365-21885384 | Msa0634560:CDS | 50.0% |
! | TGGGGCAGTAGTTGCTATTC+GGG | + | chr4_3:21885366-21885385 | Msa0634560:CDS | 50.0% |
ACATGAGTTAGAGCTGGTCG+AGG | + | chr4_3:21885504-21885523 | Msa0634560:CDS | 50.0% | |
GAGAAAGAGCAACAGCTACC+TGG | - | chr4_3:21885652-21885671 | None:intergenic | 50.0% | |
TAGAAGAGTCGATGAGGGCA+AGG | + | chr4_3:21885684-21885703 | Msa0634560:CDS | 50.0% | |
AGAAGAGTCGATGAGGGCAA+GGG | + | chr4_3:21885685-21885704 | Msa0634560:CDS | 50.0% | |
GAGGGCAAGGGATCAACTTA+TGG | + | chr4_3:21885697-21885716 | Msa0634560:CDS | 50.0% | |
GACTGCTGAGCAACGTCTAA+TGG | + | chr4_3:21885868-21885887 | Msa0634560:CDS | 50.0% | |
TGCTGAGCAACGTCTAATGG+TGG | + | chr4_3:21885871-21885890 | Msa0634560:CDS | 50.0% | |
!! | GGCTATCACTTGGTACTGGT+AGG | - | chr4_3:21886364-21886383 | None:intergenic | 50.0% |
CATGACAAGAACCTTGAGGC+CGG | - | chr4_3:21886912-21886931 | None:intergenic | 50.0% | |
CATTAGGACCCAAGAAGTCG+GGG | - | chr4_3:21887046-21887065 | None:intergenic | 50.0% | |
!! | CGGTTTTGTCCCAGTTTGAG+TGG | - | chr4_3:21887249-21887268 | None:intergenic | 50.0% |
ACTTGTAATGCAGGGTGAGC+AGG | + | chr4_3:21887695-21887714 | Msa0634560:intron | 50.0% | |
!! | ATGCCTGCGTGTTGTTTCTC+TGG | + | chr4_3:21887783-21887802 | Msa0634560:CDS | 50.0% |
GTTCCAGAGAAACAACACGC+AGG | - | chr4_3:21887789-21887808 | None:intergenic | 50.0% | |
CCACCACTGCAAAACATCAG+AGG | - | chr4_3:21888277-21888296 | None:intergenic | 50.0% | |
! | CCTCTGATGTTTTGCAGTGG+TGG | + | chr4_3:21888274-21888293 | Msa0634560:three_prime_UTR | 50.0% |
TCCACCAGTTTCCGGGCAAA+GGG | - | chr4_3:21884401-21884420 | None:intergenic | 55.0% | |
ATCCACCAGTTTCCGGGCAA+AGG | - | chr4_3:21884402-21884421 | None:intergenic | 55.0% | |
GATTACGGCCGAATTGGCTG+AGG | + | chr4_3:21884594-21884613 | Msa0634560:five_prime_UTR | 55.0% | |
AGCTCCAACCCAGTACGTGT+CGG | - | chr4_3:21885187-21885206 | None:intergenic | 55.0% | |
TTGAGACAGCAGAACCCTGC+TGG | + | chr4_3:21885223-21885242 | Msa0634560:CDS | 55.0% | |
CGAATAGCAACTACTGCCCC+AGG | - | chr4_3:21885367-21885386 | None:intergenic | 55.0% | |
GGTCGAGGTAGTTGCTGATC+AGG | + | chr4_3:21885519-21885538 | Msa0634560:CDS | 55.0% | |
GATTTGCCGGTGCATGCGAT+TGG | + | chr4_3:21886203-21886222 | Msa0634560:CDS | 55.0% | |
TCATCGCCAATCGCATGCAC+CGG | - | chr4_3:21886212-21886231 | None:intergenic | 55.0% | |
AGGCAGCATTTCCATCGCTG+TGG | + | chr4_3:21886292-21886311 | Msa0634560:CDS | 55.0% | |
! | AATCCCGTTGGAAGTGGGCT+TGG | + | chr4_3:21886593-21886612 | Msa0634560:CDS | 55.0% |
! | ATCCCGTTGGAAGTGGGCTT+GGG | + | chr4_3:21886594-21886613 | Msa0634560:CDS | 55.0% |
AAGCCCAAGCCCACTTCCAA+CGG | - | chr4_3:21886600-21886619 | None:intergenic | 55.0% | |
CGGCCTCAAGGTTCTTGTCA+TGG | + | chr4_3:21886910-21886929 | Msa0634560:CDS | 55.0% | |
GTGAGCAGGTCAGCGACAAA+GGG | + | chr4_3:21887709-21887728 | Msa0634560:CDS | 55.0% | |
CCAGACTCAACAGTGGCCTA+GGG | - | chr4_3:21888185-21888204 | None:intergenic | 55.0% | |
TCCAGACTCAACAGTGGCCT+AGG | - | chr4_3:21888186-21888205 | None:intergenic | 55.0% | |
GGCAAAGGGCCCTGGTAATC+CGG | - | chr4_3:21884387-21884406 | None:intergenic | 60.0% | |
GATTACCAGGGCCCTTTGCC+CGG | + | chr4_3:21884387-21884406 | Msa0634560:intron | 60.0% | |
TACGGCCGAATTGGCTGAGG+TGG | + | chr4_3:21884597-21884616 | Msa0634560:five_prime_UTR | 60.0% | |
GATGCCGACACGTACTGGGT+TGG | + | chr4_3:21885180-21885199 | Msa0634560:CDS | 60.0% | |
AGCCCAAGCCCACTTCCAAC+GGG | - | chr4_3:21886599-21886618 | None:intergenic | 60.0% | |
GGTGAGCAGGTCAGCGACAA+AGG | + | chr4_3:21887708-21887727 | Msa0634560:CDS | 60.0% | |
CCCTAGGCCACTGTTGAGTC+TGG | + | chr4_3:21888182-21888201 | Msa0634560:three_prime_UTR | 60.0% | |
AGTTTCCGGGCAAAGGGCCC+TGG | - | chr4_3:21884395-21884414 | None:intergenic | 65.0% | |
AGGGCCCTTTGCCCGGAAAC+TGG | + | chr4_3:21884394-21884413 | Msa0634560:intron | 65.0% | |
GCCCTTTGCCCGGAAACTGG+TGG | + | chr4_3:21884397-21884416 | Msa0634560:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 21883379 | 21888307 | 21883379 | ID=Msa0634560;Name=Msa0634560 |
chr4_3 | mRNA | 21883379 | 21888307 | 21883379 | ID=Msa0634560-mRNA-1;Parent=Msa0634560;Name=Msa0634560-mRNA-1;_AED=0.06;_eAED=0.06;_QI=292|1|1|1|0.83|0.71|7|245|741 |
chr4_3 | exon | 21883379 | 21883626 | 21883379 | ID=Msa0634560-mRNA-1:exon:5677;Parent=Msa0634560-mRNA-1 |
chr4_3 | exon | 21884588 | 21885540 | 21884588 | ID=Msa0634560-mRNA-1:exon:5678;Parent=Msa0634560-mRNA-1 |
chr4_3 | exon | 21885653 | 21886021 | 21885653 | ID=Msa0634560-mRNA-1:exon:5679;Parent=Msa0634560-mRNA-1 |
chr4_3 | exon | 21886137 | 21886403 | 21886137 | ID=Msa0634560-mRNA-1:exon:5680;Parent=Msa0634560-mRNA-1 |
chr4_3 | exon | 21886506 | 21886633 | 21886506 | ID=Msa0634560-mRNA-1:exon:5681;Parent=Msa0634560-mRNA-1 |
chr4_3 | exon | 21886745 | 21886942 | 21886745 | ID=Msa0634560-mRNA-1:exon:5682;Parent=Msa0634560-mRNA-1 |
chr4_3 | exon | 21887708 | 21888307 | 21887708 | ID=Msa0634560-mRNA-1:exon:5683;Parent=Msa0634560-mRNA-1 |
chr4_3 | five_prime_UTR | 21883379 | 21883626 | 21883379 | ID=Msa0634560-mRNA-1:five_prime_utr;Parent=Msa0634560-mRNA-1 |
chr4_3 | five_prime_UTR | 21884588 | 21884631 | 21884588 | ID=Msa0634560-mRNA-1:five_prime_utr;Parent=Msa0634560-mRNA-1 |
chr4_3 | CDS | 21884632 | 21885540 | 21884632 | ID=Msa0634560-mRNA-1:cds;Parent=Msa0634560-mRNA-1 |
chr4_3 | CDS | 21885653 | 21886021 | 21885653 | ID=Msa0634560-mRNA-1:cds;Parent=Msa0634560-mRNA-1 |
chr4_3 | CDS | 21886137 | 21886403 | 21886137 | ID=Msa0634560-mRNA-1:cds;Parent=Msa0634560-mRNA-1 |
chr4_3 | CDS | 21886506 | 21886633 | 21886506 | ID=Msa0634560-mRNA-1:cds;Parent=Msa0634560-mRNA-1 |
chr4_3 | CDS | 21886745 | 21886942 | 21886745 | ID=Msa0634560-mRNA-1:cds;Parent=Msa0634560-mRNA-1 |
chr4_3 | CDS | 21887708 | 21888062 | 21887708 | ID=Msa0634560-mRNA-1:cds;Parent=Msa0634560-mRNA-1 |
chr4_3 | three_prime_UTR | 21888063 | 21888307 | 21888063 | ID=Msa0634560-mRNA-1:three_prime_utr;Parent=Msa0634560-mRNA-1 |
Gene Sequence |
Protein sequence |