AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0638900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638900 MtrunA17_Chr4g0039741 92.373 354 4 2 1 343 1 342 0.0 658
Msa0638900 MtrunA17_Chr4g0039751 78.492 358 48 5 1 343 1 344 0.0 558
Msa0638900 MtrunA17_Chr7g0269641 62.304 191 51 5 21 197 2 185 1.32e-67 211
Msa0638900 MtrunA17_Chr7g0269651 65.432 81 26 1 256 336 1 79 1.51e-26 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638900 AT5G03415.1 59.030 371 91 10 21 343 28 385 1.44e-131 381
Msa0638900 AT5G03415.2 57.143 371 92 11 21 343 28 379 1.47e-123 360
Msa0638900 AT5G02470.3 46.522 230 91 5 63 280 32 241 1.74e-64 206
Msa0638900 AT5G02470.1 46.522 230 91 5 63 280 32 241 1.74e-64 206
Msa0638900 AT5G02470.2 46.522 230 91 5 63 280 32 241 1.74e-64 206

Find 172 sgRNAs with CRISPR-Local

Find 683 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATATATTGGTTGGTATT+TGG 0.123531 4_3:+34529073 Msa0638900:three_prime_UTR
AATCACAAAGGTATATTAAT+TGG 0.132489 4_3:-34533741 None:intergenic
ATGTACAGACATGCTTAATT+AGG 0.206763 4_3:-34533701 None:intergenic
GTTCTCAAGGCAATGGATTT+TGG 0.207282 4_3:+34528501 Msa0638900:CDS
TTGGCGGATGCTAACGATTT+AGG 0.230171 4_3:+34524491 None:intergenic
TTCGGGATTCACTAATTTAC+AGG 0.232522 4_3:+34529014 Msa0638900:three_prime_UTR
CTGTTTGTTTCTTTATCGTT+TGG 0.245613 4_3:+34528839 Msa0638900:three_prime_UTR
TGTTTGTTTCTTTATCGTTT+GGG 0.268735 4_3:+34528840 Msa0638900:three_prime_UTR
TCCACTCCCTGGAATATTAA+AGG 0.271571 4_3:+34528662 Msa0638900:CDS
CGTTTGCCTCTTTATTGTTT+AGG 0.272662 4_3:+34533815 Msa0638900:three_prime_UTR
TATGGATATATACTATATAT+TGG 0.278344 4_3:+34529062 Msa0638900:three_prime_UTR
CGAGGGAAAGAGGAGATCTT+AGG 0.279392 4_3:-34524596 None:intergenic
GGTTGTGGAACTACGCTTTC+CGG 0.284948 4_3:+34524865 Msa0638900:CDS
TATTATTGCTACAAGTTTGT+AGG 0.286595 4_3:+34527510 Msa0638900:CDS
TGTCCTGTTGCTTGTGTTGT+TGG 0.290846 4_3:+34529112 Msa0638900:three_prime_UTR
ATTGTTCATTTCGTTGAATA+AGG 0.299922 4_3:-34527542 None:intergenic
TTACAAATTACACTGTAAAT+CGG 0.306471 4_3:-34533979 None:intergenic
TATACCTGAACCAGAATAAA+AGG 0.312486 4_3:-34527606 None:intergenic
TAAATGTAGTAAATGATAAA+TGG 0.318350 4_3:-34528887 None:intergenic
TATACAACATAGGTTACTTT+CGG 0.325008 4_3:+34528996 Msa0638900:three_prime_UTR
ATACAACATAGGTTACTTTC+GGG 0.332484 4_3:+34528997 Msa0638900:three_prime_UTR
ACTCTTGCCTTTAATATTCC+AGG 0.333887 4_3:-34528669 None:intergenic
TGATGCTCTGAATGTTCTTA+TGG 0.333958 4_3:+34527091 Msa0638900:CDS
TACAAATTACACTGTAAATC+GGG 0.337435 4_3:-34533978 None:intergenic
AACCTTTCATACTAAATTGC+CGG 0.339281 4_3:-34525865 None:intergenic
TCCTGCTCGTTGAGCCTGAT+TGG 0.340052 4_3:-34524888 None:intergenic
TGGTGGTTTGTCCCCTGATC+AGG 0.346346 4_3:+34526925 Msa0638900:CDS
CAGTTTCAAACATGTTAGTT+AGG 0.354238 4_3:+34528625 Msa0638900:CDS
TGAAATTAATCCTATGTTGT+TGG 0.359723 4_3:-34533949 None:intergenic
GATTAACAGCGGCGGTTATT+CGG 0.366058 4_3:-34524619 None:intergenic
AAATGACTTGTCTGTATTGA+TGG 0.366464 4_3:-34533769 None:intergenic
GAAGATAAGAAAACCTGATC+AGG 0.380867 4_3:-34526938 None:intergenic
CGAAGAGGACGAGGAATTGA+TGG 0.402627 4_3:+34524843 Msa0638900:CDS
ACTACGCTTTCCGGCCAATC+AGG 0.405110 4_3:+34524874 Msa0638900:CDS
GAGAATCAGTTGTAATAAAT+CGG 0.409087 4_3:+34528968 Msa0638900:three_prime_UTR
TATTATGAAGGTCTATAATT+CGG 0.409699 4_3:-34528773 None:intergenic
ATACCAACAACACAAGCAAC+AGG 0.415272 4_3:-34529115 None:intergenic
AGAGAGAGGTGAGGTTGTGA+TGG 0.419891 4_3:-34524641 None:intergenic
TTAAATAGACACAGCGTCTT+GGG 0.420475 4_3:+34527292 Msa0638900:intron
ATCAATACAGACAAGTCATT+TGG 0.422322 4_3:+34533771 Msa0638900:three_prime_UTR
TAGGAGTTATGCAGGTAGGA+TGG 0.425576 4_3:+34524510 Msa0638900:five_prime_UTR
TGTACAGACATGCTTAATTA+GGG 0.426762 4_3:-34533700 None:intergenic
GGCTCAACGAGCAGGAGTGC+CGG 0.432075 4_3:+34524895 Msa0638900:CDS
GCCTTTAATATTCCAGGGAG+TGG 0.432840 4_3:-34528663 None:intergenic
ATCACAAAGGTATATTAATT+GGG 0.436078 4_3:-34533740 None:intergenic
GAAAGTAACCTATGTTGTAT+AGG 0.443564 4_3:-34528994 None:intergenic
TCTGCCAAGGTAGTAATTGA+TGG 0.444466 4_3:-34533858 None:intergenic
AGACACAGCGTCTTGGGCTT+AGG 0.448668 4_3:+34527298 Msa0638900:intron
CTTTATCGTTTGGGGTAGAC+TGG 0.450774 4_3:+34528849 Msa0638900:three_prime_UTR
TCCTCATGCAACTGTGGAAG+TGG 0.457569 4_3:+34528132 Msa0638900:CDS
TTCTTCATATTGCGTGCCCT+AGG 0.459014 4_3:+34524736 Msa0638900:five_prime_UTR
GTTAGTCATCAGTACAGCTT+TGG 0.461202 4_3:+34528796 Msa0638900:three_prime_UTR
ATTAAATAGACACAGCGTCT+TGG 0.463317 4_3:+34527291 Msa0638900:intron
GATATATACTATATATTGGT+TGG 0.464111 4_3:+34529066 Msa0638900:three_prime_UTR
GCCAATCAGGCTCAACGAGC+AGG 0.466675 4_3:+34524887 Msa0638900:CDS
GGGGAAGGTTCTAGCATGTC+AGG 0.468504 4_3:+34528576 Msa0638900:CDS
AGACTCACGCAACTACTGCC+TGG 0.468595 4_3:-34525020 None:intergenic
GACGAGGAATTGATGGGTTG+TGG 0.469944 4_3:+34524850 Msa0638900:CDS
AGCTTCAAAATCCTCACTAC+AGG 0.476383 4_3:+34524788 Msa0638900:five_prime_UTR
GGCTATGAATATTATTTCCA+AGG 0.477616 4_3:+34527112 Msa0638900:CDS
AGGTAAAGATACACCTCCAC+TGG 0.479385 4_3:-34527586 None:intergenic
CTGCTCAAGCTCCTGCAGAT+AGG 0.480130 4_3:-34527343 None:intergenic
GAGTGATATTGAAGAACTAA+AGG 0.483152 4_3:+34527178 Msa0638900:CDS
GAGGGAAAGAGGAGATCTTA+GGG 0.485171 4_3:-34524595 None:intergenic
GCTCAACGAGCAGGAGTGCC+GGG 0.485828 4_3:+34524896 Msa0638900:CDS
CTCCGGCAATTTAGTATGAA+AGG 0.485877 4_3:+34525863 Msa0638900:CDS
AGGAGTTATGCAGGTAGGAT+GGG 0.489677 4_3:+34524511 Msa0638900:five_prime_UTR
GCTCGTTGAGCCTGATTGGC+CGG 0.490544 4_3:-34524884 None:intergenic
CATTGTAGCTAGAGAGATCA+TGG 0.496810 4_3:+34533918 Msa0638900:three_prime_UTR
AATGAACAATTATATAGCTC+AGG 0.501710 4_3:+34527555 Msa0638900:CDS
TATACAGACATGCTTAAGTA+AGG 0.506147 4_3:-34528733 None:intergenic
AGCCGGAGTGAGCAGACCAC+GGG 0.509849 4_3:+34524928 Msa0638900:CDS
GGGGACAAACCACCATTGCT+TGG 0.511216 4_3:-34526917 None:intergenic
GACTCACGCAACTACTGCCT+GGG 0.512394 4_3:-34525019 None:intergenic
ATAAGAATGGAAGAGGGCTC+CGG 0.512718 4_3:+34525846 Msa0638900:CDS
GTCCGTGGACGAAGAGGACG+AGG 0.514783 4_3:+34524834 Msa0638900:CDS
CTCTTGCCTTTAATATTCCA+GGG 0.515553 4_3:-34528668 None:intergenic
ACTGATTCTCTCTTACTACA+TGG 0.516286 4_3:-34528955 None:intergenic
TGATACAAAACAAGATGCAT+TGG 0.516748 4_3:-34534042 None:intergenic
TGATGACGATGCTGCTTCCC+AGG 0.519370 4_3:+34525002 Msa0638900:CDS
GGTTATTCGGCGAGGGAAAG+AGG 0.520667 4_3:-34524606 None:intergenic
CAATTATGTTCTCAAGGCAA+TGG 0.525211 4_3:+34528494 Msa0638900:CDS
CCATCCATCAATTACTACCT+TGG 0.526291 4_3:+34533854 Msa0638900:three_prime_UTR
CCGACATCACCTCCACTCCC+TGG 0.527073 4_3:+34528651 Msa0638900:CDS
ATTTATGTGGATATTAGTTG+TGG 0.528580 4_3:+34534011 Msa0638900:three_prime_UTR
TTCCTCGTCCTCTTCGTCCA+CGG 0.529381 4_3:-34524836 None:intergenic
TCTTCATATTGCGTGCCCTA+GGG 0.533444 4_3:+34524737 Msa0638900:five_prime_UTR
GTCTAACCTAAACAATAAAG+AGG 0.536603 4_3:-34533821 None:intergenic
TTGGTAGGTCAGCAGCAGCT+TGG 0.538837 4_3:+34533790 Msa0638900:three_prime_UTR
TAACGATTTAGGAGTTATGC+AGG 0.543605 4_3:+34524502 None:intergenic
CTAAACAATAAAGAGGCAAA+CGG 0.550320 4_3:-34533814 None:intergenic
CTGATTCTCTCTTACTACAT+GGG 0.550977 4_3:-34528954 None:intergenic
GTCAGGCATGTATCAATCAC+AGG 0.555543 4_3:+34528593 Msa0638900:CDS
GTTTGTTTCTTTATCGTTTG+GGG 0.556298 4_3:+34528841 Msa0638900:three_prime_UTR
ACAGGACAAGCAAGATGCAT+TGG 0.558929 4_3:-34529097 None:intergenic
TTGTCGTCATGCAGCTCGAA+AGG 0.559999 4_3:-34528474 None:intergenic
AAGATAAGAAAACCTGATCA+GGG 0.563158 4_3:-34526937 None:intergenic
CACACAATATTGCGGATGGA+GGG 0.564114 4_3:+34528556 Msa0638900:CDS
GGCTTAGGAGTAGAATTGAA+AGG 0.565800 4_3:+34527313 Msa0638900:CDS
TTTAATATTCCAGGGAGTGG+AGG 0.566833 4_3:-34528660 None:intergenic
TGTAGTAAATGATAAATGGT+AGG 0.568227 4_3:-34528883 None:intergenic
GTCTGCTCACTCCGGCTAGA+CGG 0.569869 4_3:-34524922 None:intergenic
TTTGAGAGCAGCGTTATCAC+CGG 0.570401 4_3:-34524959 None:intergenic
TCAAAATCCTCACTACAGGA+TGG 0.572606 4_3:+34524792 Msa0638900:exon
CAGACCACGGGGACAGCCGC+CGG 0.573222 4_3:+34524940 Msa0638900:CDS
GTGCCGGGTTACCGTCTAGC+CGG 0.573556 4_3:+34524911 Msa0638900:CDS
AAGGAAAGCAGCCTATCTGC+AGG 0.574961 4_3:+34527332 Msa0638900:CDS
AATATTGCGGATGGAGGGGA+AGG 0.575401 4_3:+34528561 Msa0638900:CDS
TTCTTCAATATCACTCAGAC+TGG 0.575701 4_3:-34527171 None:intergenic
CTGATGACTAACTATTATGA+AGG 0.576595 4_3:-34528785 None:intergenic
CCAGGGAGTGGAGGTGATGT+CGG 0.580031 4_3:-34528651 None:intergenic
GGAATGGAGTCCAACAACAT+AGG 0.581085 4_3:+34533939 Msa0638900:three_prime_UTR
ACACAATATTGCGGATGGAG+GGG 0.585147 4_3:+34528557 Msa0638900:CDS
CAAAATCCTCACTACAGGAT+GGG 0.585807 4_3:+34524793 Msa0638900:exon
GAGGAGATCTTAGGGAACGC+GGG 0.588075 4_3:-34524587 None:intergenic
TAGGGCACGCAATATGAAGA+AGG 0.591113 4_3:-34524734 None:intergenic
CCAAGGTAGTAATTGATGGA+TGG 0.596183 4_3:-34533854 None:intergenic
CATTTGATAGGGTCCTTGTG+AGG 0.596609 4_3:+34534063 Msa0638900:three_prime_UTR
ACAAATTACACTGTAAATCG+GGG 0.598164 4_3:-34533977 None:intergenic
CAGCGGCGGTTATTCGGCGA+GGG 0.598249 4_3:-34524613 None:intergenic
TCCCCGTGGTCTGCTCACTC+CGG 0.599110 4_3:-34524930 None:intergenic
ACACACAATATTGCGGATGG+AGG 0.602906 4_3:+34528555 Msa0638900:CDS
GAAGAGGACGAGGAATTGAT+GGG 0.603441 4_3:+34524844 Msa0638900:CDS
CTAAATTGATCGAAAACGAA+GGG 0.603489 4_3:-34524767 None:intergenic
GATCTCTCTAGCTACAATGC+GGG 0.606530 4_3:-34533914 None:intergenic
TGACGACAATTATGTTCTCA+AGG 0.607641 4_3:+34528488 Msa0638900:CDS
GATTTAGGAGTTATGCAGGT+AGG 0.608300 4_3:+34524506 Msa0638900:five_prime_UTR
TCCACTTCCACAGTTGCATG+AGG 0.608745 4_3:-34528133 None:intergenic
GCTAAATTGATCGAAAACGA+AGG 0.611313 4_3:-34524768 None:intergenic
GTCATCAGTACAGCTTTGGT+AGG 0.613336 4_3:+34528800 Msa0638900:three_prime_UTR
GTTACACACAATATTGCGGA+TGG 0.615879 4_3:+34528552 Msa0638900:CDS
TCGGGATTCACTAATTTACA+GGG 0.619569 4_3:+34529015 Msa0638900:three_prime_UTR
TGATTCTCTCTTACTACATG+GGG 0.619753 4_3:-34528953 None:intergenic
ACAGCGGCGGTTATTCGGCG+AGG 0.626330 4_3:-34524614 None:intergenic
TGCGTTCCCATCCTGTAGTG+AGG 0.626916 4_3:-34524799 None:intergenic
GGGAGTGGAGGTGATGTCGG+AGG 0.628434 4_3:-34528648 None:intergenic
AGGAGATCTTAGGGAACGCG+GGG 0.629465 4_3:-34524586 None:intergenic
TCAATCGTCCGTGGACGAAG+AGG 0.631369 4_3:+34524828 Msa0638900:CDS
ATCGGTAACCTATACAACAT+AGG 0.634392 4_3:+34528986 Msa0638900:three_prime_UTR
ATGGACAGTACGAAACGGAA+GGG 0.638006 4_3:-34529147 None:intergenic
CAATGTTACACACAATATTG+CGG 0.641067 4_3:+34528548 Msa0638900:CDS
TCAGGAAATCCTCCCAGTGG+AGG 0.644133 4_3:+34527573 Msa0638900:CDS
TAGCTAGAGAGATCATGGAA+TGG 0.647839 4_3:+34533923 Msa0638900:three_prime_UTR
ATACAGACAAGTCATTTGGT+AGG 0.648893 4_3:+34533775 Msa0638900:three_prime_UTR
GACACGTCCTCATGCAACTG+TGG 0.649899 4_3:+34528126 Msa0638900:intron
TAGCCGGAGTGAGCAGACCA+CGG 0.651050 4_3:+34524927 Msa0638900:CDS
TGTGTAACATTGTCACTCTG+TGG 0.651492 4_3:-34528537 None:intergenic
GGTCCTTGTGAGGCTCTCTG+TGG 0.654225 4_3:+34534073 Msa0638900:three_prime_UTR
ATCACCGGCGGCTGTCCCCG+TGG 0.656058 4_3:-34524944 None:intergenic
ACTCCGGCTAGACGGTAACC+CGG 0.657214 4_3:-34524914 None:intergenic
AGAGGAGATCTTAGGGAACG+CGG 0.674684 4_3:-34524588 None:intergenic
GAGCATCATAGACCCTTCGA+CGG 0.678223 4_3:-34527076 None:intergenic
GGTAAAGATACACCTCCACT+GGG 0.679973 4_3:-34527585 None:intergenic
AGACCACAGAGAGCCTCACA+AGG 0.680730 4_3:-34534076 None:intergenic
AGCTCAGGAAATCCTCCCAG+TGG 0.682103 4_3:+34527570 Msa0638900:CDS
GCAGCCGCATCAATCGTCCG+TGG 0.683605 4_3:+34524819 Msa0638900:CDS
AGATAAGAAAACCTGATCAG+GGG 0.686331 4_3:-34526936 None:intergenic
TTGTGATGGATTAACAGCGG+CGG 0.686374 4_3:-34524627 None:intergenic
TTGATGGCTAACAATCACAA+AGG 0.688839 4_3:-34533753 None:intergenic
ATAGGTGGCAGATGAACTTG+TGG 0.689893 4_3:+34526880 Msa0638900:intron
ATTCTCTCTTACTACATGGG+GGG 0.694106 4_3:-34528951 None:intergenic
GATTCTCTCTTACTACATGG+GGG 0.695878 4_3:-34528952 None:intergenic
AACATGTTTGAAACTGACTG+AGG 0.695881 4_3:-34528618 None:intergenic
TCGTCCACGGACGATTGATG+CGG 0.696336 4_3:-34524823 None:intergenic
GAGAGCAGCGTTATCACCGG+CGG 0.697043 4_3:-34524956 None:intergenic
TGATCTCTCTAGCTACAATG+CGG 0.705794 4_3:-34533915 None:intergenic
GGGGTGATAAGAATGGAAGA+GGG 0.716134 4_3:+34525840 Msa0638900:CDS
AAAGATACACCTCCACTGGG+AGG 0.724160 4_3:-34527582 None:intergenic
ATATCACTCAGACTGGTACG+AGG 0.734989 4_3:-34527164 None:intergenic
AGGTTGTGATGGATTAACAG+CGG 0.736581 4_3:-34524630 None:intergenic
GCCGGAGTGAGCAGACCACG+GGG 0.739516 4_3:+34524929 Msa0638900:CDS
GGAGATCTTAGGGAACGCGG+GGG 0.744362 4_3:-34524585 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAAAAAATTTTTTTTTT+AGG - chr4_3:34526845-34526864 None:intergenic 0.0%
!!! TATTTTTTTTTTTTAAATAT+AGG + chr4_3:34526862-34526881 Msa0638900:intron 0.0%
!! AAGTATAGATATAAATAAAA+AGG - chr4_3:34525699-34525718 None:intergenic 10.0%
!!! AATTTTTTTTTTAGGAAATA+AGG - chr4_3:34526837-34526856 None:intergenic 10.0%
!!! TTTTTTTTTTTAAATATAGG+TGG + chr4_3:34526865-34526884 Msa0638900:intron 10.0%
!! AAAGTTAAAACTAAAAAATA+GGG + chr4_3:34529289-34529308 Msa0638900:intron 10.0%
!! ATATTAAATATATTCTGAAT+AGG - chr4_3:34532214-34532233 None:intergenic 10.0%
!! TATTCAGAATATATTTAATA+TGG + chr4_3:34532213-34532232 Msa0638900:intron 10.0%
!! ATTCAGAATATATTTAATAT+GGG + chr4_3:34532214-34532233 Msa0638900:intron 10.0%
!! AAATTAATTAGTGGTTAATT+TGG + chr4_3:34525556-34525575 Msa0638900:intron 15.0%
!! TTATTTATATCTATACTTTG+TGG + chr4_3:34525701-34525720 Msa0638900:intron 15.0%
!! CTATTTAAAAAACTAATTGA+AGG - chr4_3:34526647-34526666 None:intergenic 15.0%
!!! CTTCAATTAGTTTTTTAAAT+AGG + chr4_3:34526645-34526664 Msa0638900:intron 15.0%
!!! ATCTTATGAACTTATTTTTT+TGG + chr4_3:34527011-34527030 Msa0638900:intron 15.0%
!!! TCTTATGAACTTATTTTTTT+GGG + chr4_3:34527012-34527031 Msa0638900:intron 15.0%
!!! AAATAATTTTCCCTTTTTTT+GGG + chr4_3:34527845-34527864 Msa0638900:intron 15.0%
!! TAAATGTAGTAAATGATAAA+TGG - chr4_3:34528890-34528909 None:intergenic 15.0%
!! TATGGATATATACTATATAT+TGG + chr4_3:34529062-34529081 Msa0638900:three_prime_UTR 15.0%
!! ATTTCGATGATAAATTAATA+TGG - chr4_3:34529169-34529188 None:intergenic 15.0%
!! CAAAGTTAAAACTAAAAAAT+AGG + chr4_3:34529288-34529307 Msa0638900:intron 15.0%
!!! ATGTTTTAAAAATTTGATCA+TGG - chr4_3:34529515-34529534 None:intergenic 15.0%
!!! ATATTTAGAATACTTATCTA+GGG - chr4_3:34531002-34531021 None:intergenic 15.0%
!!! TATTATTTCTAAGGATAAAA+AGG + chr4_3:34531926-34531945 Msa0638900:intron 15.0%
!! ATCAAATTAAGCAATTAAAA+TGG - chr4_3:34532105-34532124 None:intergenic 15.0%
!!! TTGTTCATTTTGATTTTAAT+AGG + chr4_3:34533142-34533161 Msa0638900:intron 15.0%
!! GGTTGCATAAAAATAAATTT+AGG + chr4_3:34524532-34524551 Msa0638900:five_prime_UTR 20.0%
!! TATAAATCCAATTTCATGTT+TGG + chr4_3:34525108-34525127 Msa0638900:intron 20.0%
!!! AAGATTTTCAATTAGTGAAA+AGG + chr4_3:34525215-34525234 Msa0638900:intron 20.0%
!! TTTATTCAAGGTCTAAAAAA+TGG + chr4_3:34525290-34525309 Msa0638900:intron 20.0%
!! TTAAAACCTGAATTAATTAG+TGG + chr4_3:34525446-34525465 Msa0638900:intron 20.0%
!! AATTAACCACTAATTAATTC+AGG - chr4_3:34525455-34525474 None:intergenic 20.0%
!! GAATTAATTAGTGGTTAATT+TGG + chr4_3:34525455-34525474 Msa0638900:intron 20.0%
!! TTCATTGCAAAATTAATTAG+TGG + chr4_3:34525547-34525566 Msa0638900:intron 20.0%
!! TAAGAATCAATCGAAAATAA+TGG - chr4_3:34525771-34525790 None:intergenic 20.0%
!! TAAAAAGTTAAAGATCAAAG+TGG - chr4_3:34525910-34525929 None:intergenic 20.0%
!!! AAAAAACTGGTTTAAAGTAA+AGG - chr4_3:34526427-34526446 None:intergenic 20.0%
!! TTCTATAAATACATACATGT+TGG + chr4_3:34526569-34526588 Msa0638900:intron 20.0%
!!! TATTTGCTATTTACACATTA+AGG + chr4_3:34526978-34526997 Msa0638900:intron 20.0%
!!! CTTATGAACTTATTTTTTTG+GGG + chr4_3:34527013-34527032 Msa0638900:intron 20.0%
!!! TTGTATTTCTTTTTTATCCT+TGG - chr4_3:34527132-34527151 None:intergenic 20.0%
!! AGGATAAAAAAGAAATACAA+TGG + chr4_3:34527132-34527151 Msa0638900:CDS 20.0%
!! TAAAAAAGAAATACAATGGA+AGG + chr4_3:34527136-34527155 Msa0638900:CDS 20.0%
!! AAAAAAGAAATACAATGGAA+GGG + chr4_3:34527137-34527156 Msa0638900:CDS 20.0%
!! AATTTAAAAAATAGCAATCC+AGG - chr4_3:34527415-34527434 None:intergenic 20.0%
!! ATGTAATATATTATCATCCA+AGG - chr4_3:34527695-34527714 None:intergenic 20.0%
!!! GAAATAATTTTCCCTTTTTT+TGG + chr4_3:34527844-34527863 Msa0638900:intron 20.0%
!!! TTGTTCATTTTGATTTCAAT+AGG + chr4_3:34528176-34528195 Msa0638900:CDS 20.0%
!! TATTATGAAGGTCTATAATT+CGG - chr4_3:34528776-34528795 None:intergenic 20.0%
!! GATATATACTATATATTGGT+TGG + chr4_3:34529066-34529085 Msa0638900:three_prime_UTR 20.0%
!! ATTAAATCATCTTGATATAC+AGG + chr4_3:34530366-34530385 Msa0638900:intron 20.0%
!!! CATATTTAGAATACTTATCT+AGG - chr4_3:34531003-34531022 None:intergenic 20.0%
!! TATCTAATATGTATCTGATA+CGG + chr4_3:34531140-34531159 Msa0638900:intron 20.0%
!! AAATAGAGATTAATATTGTG+AGG + chr4_3:34531280-34531299 Msa0638900:intron 20.0%
!!! TTATCATGATAGCTTTTTTT+TGG + chr4_3:34531500-34531519 Msa0638900:intron 20.0%
!!! TATCATGATAGCTTTTTTTT+GGG + chr4_3:34531501-34531520 Msa0638900:intron 20.0%
!! TGATCATGATGATTATTATT+GGG + chr4_3:34531532-34531551 Msa0638900:intron 20.0%
!! TTAAAGTCAAGAAATAAACT+GGG - chr4_3:34531657-34531676 None:intergenic 20.0%
!! ATTAAAGTCAAGAAATAAAC+TGG - chr4_3:34531658-34531677 None:intergenic 20.0%
!!! ATGTGATTGTTTTATATTGT+AGG + chr4_3:34531676-34531695 Msa0638900:intron 20.0%
!!! ACTATATCTGAAATTTTGAA+TGG - chr4_3:34531789-34531808 None:intergenic 20.0%
!! TAAATATATTCTGAATAGGA+TGG - chr4_3:34532210-34532229 None:intergenic 20.0%
!! ATTGTTCATTTCGTTTAATA+AGG - chr4_3:34532358-34532377 None:intergenic 20.0%
!!! AAATATTTTATCAGCTCATT+TGG + chr4_3:34532864-34532883 Msa0638900:intron 20.0%
!!! TTTTATGACACTACTTAATT+AGG - chr4_3:34533254-34533273 None:intergenic 20.0%
!! AAAAGAGAGTAAACATAAAT+AGG - chr4_3:34533411-34533430 None:intergenic 20.0%
!!! ATCACAAAGGTATATTAATT+GGG - chr4_3:34533743-34533762 None:intergenic 20.0%
!!! AATCACAAAGGTATATTAAT+TGG - chr4_3:34533744-34533763 None:intergenic 20.0%
!! TTACAAATTACACTGTAAAT+CGG - chr4_3:34533982-34534001 None:intergenic 20.0%
!!! GTAAAGTTTTTCAATTTATG+TGG + chr4_3:34533998-34534017 Msa0638900:three_prime_UTR 20.0%
!!! TTGTTTTGTATCATTTGATA+GGG + chr4_3:34534052-34534071 Msa0638900:three_prime_UTR 20.0%
!!! ATGCGTTCAATTTTGATTTA+GGG + chr4_3:34525180-34525199 Msa0638900:intron 25.0%
! TGAAAAGGAAAATGATATAC+TGG + chr4_3:34525230-34525249 Msa0638900:intron 25.0%
!!! AATAAAAAGGTTTTGAATCG+TGG - chr4_3:34525686-34525705 None:intergenic 25.0%
! AATAAAAACAGAGAATTGAC+AGG - chr4_3:34525737-34525756 None:intergenic 25.0%
!! CAAATAAGTTGTTTCAAACA+AGG - chr4_3:34525970-34525989 None:intergenic 25.0%
! TGACATAAACATTTGTGTAA+AGG + chr4_3:34525996-34526015 Msa0638900:intron 25.0%
! TAAACATTTGTGTAAAGGTT+TGG + chr4_3:34526001-34526020 Msa0638900:intron 25.0%
!!! GACAGAGATTTATTTTATTC+AGG + chr4_3:34526281-34526300 Msa0638900:intron 25.0%
! GTAGAGAAAATTGTCAAAAA+TGG - chr4_3:34526307-34526326 None:intergenic 25.0%
!!! TGACAATTTTCTCTACTTTT+TGG + chr4_3:34526311-34526330 Msa0638900:intron 25.0%
! AATCAACAGTAAATTAGAGA+GGG - chr4_3:34526346-34526365 None:intergenic 25.0%
! AAATCAACAGTAAATTAGAG+AGG - chr4_3:34526347-34526366 None:intergenic 25.0%
!!! AGACTTTATATTTTAGAACG+TGG - chr4_3:34526527-34526546 None:intergenic 25.0%
! GATAAATCACAACATGAAAT+GGG - chr4_3:34526770-34526789 None:intergenic 25.0%
! TGATAAATCACAACATGAAA+TGG - chr4_3:34526771-34526790 None:intergenic 25.0%
! ATATTGAAGAACTAAAGGTT+TGG + chr4_3:34527183-34527202 Msa0638900:intron 25.0%
! GGTATTAAATCAATTAGAGT+GGG - chr4_3:34527382-34527401 None:intergenic 25.0%
!! CACTCTAATTGATTTAATAC+CGG + chr4_3:34527381-34527400 Msa0638900:intron 25.0%
! TATTATTGCTACAAGTTTGT+AGG + chr4_3:34527510-34527529 Msa0638900:CDS 25.0%
! ATTGTTCATTTCGTTGAATA+AGG - chr4_3:34527545-34527564 None:intergenic 25.0%
! AATGAACAATTATATAGCTC+AGG + chr4_3:34527555-34527574 Msa0638900:CDS 25.0%
!! TGTATCTTTACCTTTTATTC+TGG + chr4_3:34527596-34527615 Msa0638900:CDS 25.0%
! AATTGAACAACAATTTCTAC+TGG - chr4_3:34527669-34527688 None:intergenic 25.0%
! ATTACATGAACTTAAGTAGT+TGG + chr4_3:34527739-34527758 Msa0638900:intron 25.0%
! TAGTATATAGCAGTAACTTT+CGG - chr4_3:34527892-34527911 None:intergenic 25.0%
! ATAACATAGACCCATAAAAT+AGG - chr4_3:34527962-34527981 None:intergenic 25.0%
!! TATTTTATGGGTCTATGTTA+TGG + chr4_3:34527961-34527980 Msa0638900:intron 25.0%
!! ATTTTATGGGTCTATGTTAT+GGG + chr4_3:34527962-34527981 Msa0638900:intron 25.0%
! CTTTATGATACCACAAAATT+AGG - chr4_3:34528287-34528306 None:intergenic 25.0%
!!! ATTTTCAAGTAGATAAGTCT+TGG + chr4_3:34528365-34528384 Msa0638900:intron 25.0%
!!! TTTTCAAGTAGATAAGTCTT+GGG + chr4_3:34528366-34528385 Msa0638900:intron 25.0%
! AGAGAGTAAACATAAATAAG+TGG - chr4_3:34528444-34528463 None:intergenic 25.0%
!! TGTTTGTTTCTTTATCGTTT+GGG + chr4_3:34528840-34528859 Msa0638900:three_prime_UTR 25.0%
! TGTAGTAAATGATAAATGGT+AGG - chr4_3:34528886-34528905 None:intergenic 25.0%
! GAGAATCAGTTGTAATAAAT+CGG + chr4_3:34528968-34528987 Msa0638900:three_prime_UTR 25.0%
!! TATACAACATAGGTTACTTT+CGG + chr4_3:34528996-34529015 Msa0638900:three_prime_UTR 25.0%
!!! GCTAAGTTTTCTAGTTTATA+TGG + chr4_3:34529044-34529063 Msa0638900:three_prime_UTR 25.0%
!! ACTATATATTGGTTGGTATT+TGG + chr4_3:34529073-34529092 Msa0638900:three_prime_UTR 25.0%
! TACCTATAATCAAATCATTC+AGG + chr4_3:34529461-34529480 Msa0638900:intron 25.0%
! ACCTATAATCAAATCATTCA+GGG + chr4_3:34529462-34529481 Msa0638900:intron 25.0%
!! CTTTTGATATAAATTGGTGA+TGG - chr4_3:34529847-34529866 None:intergenic 25.0%
!!! AGTCGACTTTTGATATAAAT+TGG - chr4_3:34529853-34529872 None:intergenic 25.0%
! ATTTATATCAAAAGTCGACT+CGG + chr4_3:34529853-34529872 Msa0638900:intron 25.0%
! AAAAACCTTTCATGCTAAAT+TGG - chr4_3:34530621-34530640 None:intergenic 25.0%
!!! CATGAGAAATTTTGAAATTC+AGG + chr4_3:34530749-34530768 Msa0638900:intron 25.0%
! GATACATATGAAATACTTCA+AGG - chr4_3:34531039-34531058 None:intergenic 25.0%
!! TGAAGTATTTCATATGTATC+CGG + chr4_3:34531039-34531058 Msa0638900:intron 25.0%
! AATCTCTATTTACAAAGCAT+GGG - chr4_3:34531271-34531290 None:intergenic 25.0%
! TAATCTCTATTTACAAAGCA+TGG - chr4_3:34531272-34531291 None:intergenic 25.0%
!!! ATTAGCTTCTAATTGATTTG+TGG + chr4_3:34531327-34531346 Msa0638900:intron 25.0%
!!! ATCATGATAGCTTTTTTTTG+GGG + chr4_3:34531502-34531521 Msa0638900:intron 25.0%
! GTGATCATGATGATTATTAT+TGG + chr4_3:34531531-34531550 Msa0638900:intron 25.0%
!!! TGATTGTTTTATATTGTAGG+TGG + chr4_3:34531679-34531698 Msa0638900:intron 25.0%
!!! TATTGTAGACTTACTTTTTG+TGG + chr4_3:34531817-34531836 Msa0638900:intron 25.0%
!!! ATTGTAGACTTACTTTTTGT+GGG + chr4_3:34531818-34531837 Msa0638900:intron 25.0%
! AGGATAAAAAGGAAATACAA+TGG + chr4_3:34531937-34531956 Msa0638900:intron 25.0%
! TAAAAAGGAAATACAATGGA+AGG + chr4_3:34531941-34531960 Msa0638900:intron 25.0%
! AAAAAGGAAATACAATGGAA+GGG + chr4_3:34531942-34531961 Msa0638900:intron 25.0%
! AATGAACAATTATATAGCTC+TGG + chr4_3:34527555-34527574 Msa0638900:CDS 25.0%
!! TGTATCTTTACCTTTTATTC+TGG + chr4_3:34527596-34527615 Msa0638900:CDS 25.0%
! GAAACAAAACAAAACAATAG+AGG - chr4_3:34532460-34532479 None:intergenic 25.0%
! AATACAAATGCTTACAAAAG+CGG - chr4_3:34532794-34532813 None:intergenic 25.0%
! AGGATATGAGATTAATCAAA+TGG - chr4_3:34533054-34533073 None:intergenic 25.0%
! TTTGATTAATCTCATATCCT+TGG + chr4_3:34533054-34533073 Msa0638900:intron 25.0%
! GTGTCATAAAATCAGTAATT+TGG + chr4_3:34533263-34533282 Msa0638900:intron 25.0%
! AAAAGTTACCACAAAAAATG+TGG - chr4_3:34533894-34533913 None:intergenic 25.0%
! TGAAATTAATCCTATGTTGT+TGG - chr4_3:34533952-34533971 None:intergenic 25.0%
! TACAAATTACACTGTAAATC+GGG - chr4_3:34533981-34534000 None:intergenic 25.0%
! ATTTATGTGGATATTAGTTG+TGG + chr4_3:34534011-34534030 Msa0638900:three_prime_UTR 25.0%
!!! CTTGTTTTGTATCATTTGAT+AGG + chr4_3:34534051-34534070 Msa0638900:three_prime_UTR 25.0%
CTAAATTGATCGAAAACGAA+GGG - chr4_3:34524770-34524789 None:intergenic 30.0%
AGCTAAACCAAACATGAAAT+TGG - chr4_3:34525118-34525137 None:intergenic 30.0%
! ATTTCATGTTTGGTTTAGCT+TGG + chr4_3:34525118-34525137 Msa0638900:intron 30.0%
! TTTCATGTTTGGTTTAGCTT+GGG + chr4_3:34525119-34525138 Msa0638900:intron 30.0%
!!! CATGCGTTCAATTTTGATTT+AGG + chr4_3:34525179-34525198 Msa0638900:intron 30.0%
CCTTGAATAAAATGTACCAT+TGG - chr4_3:34525281-34525300 None:intergenic 30.0%
! CCAATGGTACATTTTATTCA+AGG + chr4_3:34525278-34525297 Msa0638900:intron 30.0%
TCTAAAAAATGGTCCGTTAT+AGG + chr4_3:34525301-34525320 Msa0638900:intron 30.0%
AACATAGTGAACAAACGTTA+TGG + chr4_3:34525343-34525362 Msa0638900:intron 30.0%
TTGTTCTATACCAATTACCA+TGG - chr4_3:34525375-34525394 None:intergenic 30.0%
! GCAATGAATTTTTCATAGAC+TGG - chr4_3:34525535-34525554 None:intergenic 30.0%
AACCTTTCATACTAAATTGC+CGG - chr4_3:34525868-34525887 None:intergenic 30.0%
!!! CAATTTTCTCTACTTTTTGG+TGG + chr4_3:34526314-34526333 Msa0638900:intron 30.0%
ATCAACAGTAAATTAGAGAG+GGG - chr4_3:34526345-34526364 None:intergenic 30.0%
! CTTTTAACGTGGTAAAAAAC+TGG - chr4_3:34526440-34526459 None:intergenic 30.0%
! GTTTTGTCAATGATTAAGCA+CGG + chr4_3:34526667-34526686 Msa0638900:intron 30.0%
! TAATTATTAGCCTCAGAAAC+TGG + chr4_3:34526718-34526737 Msa0638900:intron 30.0%
AAGATAAGAAAACCTGATCA+GGG - chr4_3:34526940-34526959 None:intergenic 30.0%
GGCTATGAATATTATTTCCA+AGG + chr4_3:34527112-34527131 Msa0638900:CDS 30.0%
GAGTGATATTGAAGAACTAA+AGG + chr4_3:34527178-34527197 Msa0638900:CDS 30.0%
CGGTATTAAATCAATTAGAG+TGG - chr4_3:34527383-34527402 None:intergenic 30.0%
!!! TTTACCTTTTATTCTGGTTC+AGG + chr4_3:34527602-34527621 Msa0638900:CDS 30.0%
TATACCTGAACCAGAATAAA+AGG - chr4_3:34527609-34527628 None:intergenic 30.0%
! ATTGTTGTTCAATTATGCCT+TGG + chr4_3:34527675-34527694 Msa0638900:intron 30.0%
CAAACAAATGCCCAAAAAAA+GGG - chr4_3:34527858-34527877 None:intergenic 30.0%
AGTTACTGCTATATACTAGA+TGG + chr4_3:34527894-34527913 Msa0638900:intron 30.0%
GTCTATGTTATGGGTTTATA+CGG + chr4_3:34527971-34527990 Msa0638900:intron 30.0%
AATCAAATATCAGCACCAAT+AGG - chr4_3:34528082-34528101 None:intergenic 30.0%
!! GTTATGATGTGATTAGCTTT+AGG + chr4_3:34528233-34528252 Msa0638900:intron 30.0%
AGGAAGTCTAAACATTAAGA+CGG - chr4_3:34528267-34528286 None:intergenic 30.0%
! GTTTAGACTTCCTAATTTTG+TGG + chr4_3:34528274-34528293 Msa0638900:intron 30.0%
! CAGATAAATTTTCCAACACA+GGG - chr4_3:34528421-34528440 None:intergenic 30.0%
CAATGTTACACACAATATTG+CGG + chr4_3:34528548-34528567 Msa0638900:CDS 30.0%
CAGTTTCAAACATGTTAGTT+AGG + chr4_3:34528625-34528644 Msa0638900:CDS 30.0%
TATACAGACATGCTTAAGTA+AGG - chr4_3:34528736-34528755 None:intergenic 30.0%
CTGATGACTAACTATTATGA+AGG - chr4_3:34528788-34528807 None:intergenic 30.0%
! CTGTTTGTTTCTTTATCGTT+TGG + chr4_3:34528839-34528858 Msa0638900:three_prime_UTR 30.0%
! GTTTGTTTCTTTATCGTTTG+GGG + chr4_3:34528841-34528860 Msa0638900:three_prime_UTR 30.0%
GAAAGTAACCTATGTTGTAT+AGG - chr4_3:34528997-34529016 None:intergenic 30.0%
! ATACAACATAGGTTACTTTC+GGG + chr4_3:34528997-34529016 Msa0638900:three_prime_UTR 30.0%
TTAATATGGACAGTACGAAA+CGG - chr4_3:34529155-34529174 None:intergenic 30.0%
AGTAATTTAGCAAGTCTAGT+GGG + chr4_3:34529191-34529210 Msa0638900:intron 30.0%
ACCCTGAATGATTTGATTAT+AGG - chr4_3:34529466-34529485 None:intergenic 30.0%
TCATGGAATAAGTGATGTTT+CGG - chr4_3:34529498-34529517 None:intergenic 30.0%
TCCATTACCTCAAATCTAAA+TGG + chr4_3:34529618-34529637 Msa0638900:intron 30.0%
! ACCATTTAGATTTGAGGTAA+TGG - chr4_3:34529622-34529641 None:intergenic 30.0%
!!! GGTGTTGCTTTTATAGATAA+CGG + chr4_3:34529639-34529658 Msa0638900:intron 30.0%
AAAATATTACGTAGACCTTG+AGG - chr4_3:34529684-34529703 None:intergenic 30.0%
CGTAGAATATTCAATGTTTG+AGG + chr4_3:34529705-34529724 Msa0638900:intron 30.0%
! ATGTGAAATATGGTGTGTTT+TGG - chr4_3:34529773-34529792 None:intergenic 30.0%
GTATTATGCGATGTGAAATA+TGG - chr4_3:34529783-34529802 None:intergenic 30.0%
AAAAAGTAGATCTGATAGAG+GGG - chr4_3:34529998-34530017 None:intergenic 30.0%
GAAAAAGTAGATCTGATAGA+GGG - chr4_3:34529999-34530018 None:intergenic 30.0%
ATGAAATTGAAGAAGGGAAA+GGG - chr4_3:34530063-34530082 None:intergenic 30.0%
AATGAAATTGAAGAAGGGAA+AGG - chr4_3:34530064-34530083 None:intergenic 30.0%
GTGTGAAAAATGAAGAATTG+CGG - chr4_3:34530088-34530107 None:intergenic 30.0%
GAAGAATCATCATTCATCAA+TGG - chr4_3:34530862-34530881 None:intergenic 30.0%
ATCTATAATGTGTTGTGATC+AGG - chr4_3:34530932-34530951 None:intergenic 30.0%
GATTGTGAAATTTGTAGAAG+TGG + chr4_3:34531235-34531254 Msa0638900:intron 30.0%
AATTGATATCTTGCTTCGTA+TGG + chr4_3:34531442-34531461 Msa0638900:intron 30.0%
! TAGACAATATGGATTATGGA+CGG - chr4_3:34531595-34531614 None:intergenic 30.0%
! CAGATAGACAATATGGATTA+TGG - chr4_3:34531599-34531618 None:intergenic 30.0%
AGATAGTCAGATAGACAATA+TGG - chr4_3:34531606-34531625 None:intergenic 30.0%
AAGAAATAAACTGGGAAAAC+AGG - chr4_3:34531649-34531668 None:intergenic 30.0%
TGAATGGCAAACACAATTAA+AGG - chr4_3:34531773-34531792 None:intergenic 30.0%
!!! TTGTAGACTTACTTTTTGTG+GGG + chr4_3:34531819-34531838 Msa0638900:intron 30.0%
!! GGCAATGGATATTATTTCTA+AGG + chr4_3:34531917-34531936 Msa0638900:intron 30.0%
GAATGATATTGAAGAGCTAA+AGG + chr4_3:34531983-34532002 Msa0638900:intron 30.0%
AAGTTATAACTCAAGACTGT+GGG - chr4_3:34532013-34532032 None:intergenic 30.0%
AAAGTTATAACTCAAGACTG+TGG - chr4_3:34532014-34532033 None:intergenic 30.0%
CTAATCCCAAAATTCAATGA+AGG + chr4_3:34532078-34532097 Msa0638900:intron 30.0%
! ATGGACCTTCATTGAATTTT+GGG - chr4_3:34532086-34532105 None:intergenic 30.0%
! AATGGACCTTCATTGAATTT+TGG - chr4_3:34532087-34532106 None:intergenic 30.0%
! TTTACCTTTTATTCTGGTAC+AGG + chr4_3:34532415-34532434 Msa0638900:intron 30.0%
TTTACCTGTACCAGAATAAA+AGG - chr4_3:34532422-34532441 None:intergenic 30.0%
! AAATGTTGCCAATTTTTCCT+TGG + chr4_3:34532630-34532649 Msa0638900:intron 30.0%
TTGAAGATCCAAGGAAAAAT+TGG - chr4_3:34532641-34532660 None:intergenic 30.0%
ATCATACAATTGAAGATCCA+AGG - chr4_3:34532650-34532669 None:intergenic 30.0%
ATACAAATGCTTACAAAAGC+GGG - chr4_3:34532793-34532812 None:intergenic 30.0%
TCAAGTTATAAACTTTCCTG+TGG - chr4_3:34532969-34532988 None:intergenic 30.0%
!!! TCTACAGTTTTAAAAAGCCA+AGG - chr4_3:34533074-34533093 None:intergenic 30.0%
! GAAAGAATTTTCATGTAGAG+AGG + chr4_3:34533323-34533342 Msa0638900:intron 30.0%
! ATTTTCATGTAGAGAGGTTT+TGG + chr4_3:34533329-34533348 Msa0638900:intron 30.0%
! TTTTCATGTAGAGAGGTTTT+GGG + chr4_3:34533330-34533349 Msa0638900:intron 30.0%
GAGTAAACATAAATAGGAAG+TGG - chr4_3:34533405-34533424 None:intergenic 30.0%
TGTACAGACATGCTTAATTA+GGG - chr4_3:34533703-34533722 None:intergenic 30.0%
ATGTACAGACATGCTTAATT+AGG - chr4_3:34533704-34533723 None:intergenic 30.0%
! AAATGACTTGTCTGTATTGA+TGG - chr4_3:34533772-34533791 None:intergenic 30.0%
ATCAATACAGACAAGTCATT+TGG + chr4_3:34533771-34533790 Msa0638900:three_prime_UTR 30.0%
CTAAACAATAAAGAGGCAAA+CGG - chr4_3:34533817-34533836 None:intergenic 30.0%
GTCTAACCTAAACAATAAAG+AGG - chr4_3:34533824-34533843 None:intergenic 30.0%
!! TTTTTCCTCCACATTTTTTG+TGG + chr4_3:34533883-34533902 Msa0638900:three_prime_UTR 30.0%
ACAAATTACACTGTAAATCG+GGG - chr4_3:34533980-34533999 None:intergenic 30.0%
TGATACAAAACAAGATGCAT+TGG - chr4_3:34534045-34534064 None:intergenic 30.0%
GCTAAATTGATCGAAAACGA+AGG - chr4_3:34524771-34524790 None:intergenic 35.0%
! AATCTAGAAAGTGCAGAGAT+TGG - chr4_3:34525049-34525068 None:intergenic 35.0%
ATTGGAAGTAATGTATAGCC+AGG - chr4_3:34525263-34525282 None:intergenic 35.0%
TGGCTATACATTACTTCCAA+TGG + chr4_3:34525262-34525281 Msa0638900:intron 35.0%
GTATCAGACACTACCTATAA+CGG - chr4_3:34525317-34525336 None:intergenic 35.0%
GTTATAGGTAGTGTCTGATA+CGG + chr4_3:34525316-34525335 Msa0638900:intron 35.0%
TTTCATGACTTTGGCTGTTA+CGG - chr4_3:34525651-34525670 None:intergenic 35.0%
CGCTAAGAATTTCATGACTT+TGG - chr4_3:34525660-34525679 None:intergenic 35.0%
GTACTGCATAAACATTGAGT+GGG - chr4_3:34525794-34525813 None:intergenic 35.0%
AGAGTTTATGCATAAGCTCT+TGG + chr4_3:34526132-34526151 Msa0638900:intron 35.0%
TGTGAGAAGGTAGAAAGTAA+AGG + chr4_3:34526376-34526395 Msa0638900:intron 35.0%
AGGAAGAACAACTTACAATG+AGG + chr4_3:34526396-34526415 Msa0638900:intron 35.0%
GAACAACTTACAATGAGGTT+AGG + chr4_3:34526401-34526420 Msa0638900:intron 35.0%
! AAAAGCACAGTTCTCAATCA+TGG + chr4_3:34526455-34526474 Msa0638900:intron 35.0%
CTCAATCATGGATAGCAAAT+CGG + chr4_3:34526467-34526486 Msa0638900:intron 35.0%
CGCTATAGCATTTATTGAGT+TGG - chr4_3:34526498-34526517 None:intergenic 35.0%
!!! ATTAAGCACGGTGGTTTTTT+GGG + chr4_3:34526679-34526698 Msa0638900:intron 35.0%
! TCTGAGGCTAATAATTACCA+CGG - chr4_3:34526715-34526734 None:intergenic 35.0%
AATCACAACATGAAATGGGT+AGG - chr4_3:34526766-34526785 None:intergenic 35.0%
! GAATTTTCTGATCCAAGCAA+TGG + chr4_3:34526905-34526924 Msa0638900:CDS 35.0%
AGATAAGAAAACCTGATCAG+GGG - chr4_3:34526939-34526958 None:intergenic 35.0%
GAAGATAAGAAAACCTGATC+AGG - chr4_3:34526941-34526960 None:intergenic 35.0%
! TGATGCTCTGAATGTTCTTA+TGG + chr4_3:34527091-34527110 Msa0638900:CDS 35.0%
TTCTTCAATATCACTCAGAC+TGG - chr4_3:34527174-34527193 None:intergenic 35.0%
TTAGATCAGAACATCACTGA+AGG - chr4_3:34527253-34527272 None:intergenic 35.0%
ATTAAATAGACACAGCGTCT+TGG + chr4_3:34527291-34527310 Msa0638900:intron 35.0%
TTAAATAGACACAGCGTCTT+GGG + chr4_3:34527292-34527311 Msa0638900:intron 35.0%
TTAAATCAATTAGAGTGGGC+TGG - chr4_3:34527378-34527397 None:intergenic 35.0%
!!! ATCTCAGTATCTGCCTTTTT+TGG + chr4_3:34527634-34527653 Msa0638900:intron 35.0%
CTGGACAAAATGACCAAAAA+AGG - chr4_3:34527650-34527669 None:intergenic 35.0%
ATGAACTTAAGTAGTTGGCT+TGG + chr4_3:34527744-34527763 Msa0638900:intron 35.0%
GAAAATAGATCTTATCCAGC+TGG + chr4_3:34527806-34527825 Msa0638900:intron 35.0%
TAGTTAATTCACTAACCAGC+TGG - chr4_3:34527824-34527843 None:intergenic 35.0%
CCAAACAAATGCCCAAAAAA+AGG - chr4_3:34527859-34527878 None:intergenic 35.0%
!!! CCTTTTTTTGGGCATTTGTT+TGG + chr4_3:34527856-34527875 Msa0638900:intron 35.0%
! TTGTTTAGTTCAGCTTACTC+TGG + chr4_3:34527933-34527952 Msa0638900:intron 35.0%
! TACTCTGGTTGCCTATTTTA+TGG + chr4_3:34527948-34527967 Msa0638900:intron 35.0%
! ACTCTGGTTGCCTATTTTAT+GGG + chr4_3:34527949-34527968 Msa0638900:intron 35.0%
GAATAATATGCTCATCCTGT+TGG + chr4_3:34528040-34528059 Msa0638900:intron 35.0%
AACTCAGATAATGACAAGCA+AGG - chr4_3:34528216-34528235 None:intergenic 35.0%
! TTTTGTGGTATCATAAAGCC+CGG + chr4_3:34528289-34528308 Msa0638900:intron 35.0%
! ATACACTAGTTTCCACTTTC+CGG - chr4_3:34528311-34528330 None:intergenic 35.0%
GAAACTAGTGTATCCTATTG+TGG + chr4_3:34528318-34528337 Msa0638900:intron 35.0%
! GCAGATAAATTTTCCAACAC+AGG - chr4_3:34528422-34528441 None:intergenic 35.0%
TGACGACAATTATGTTCTCA+AGG + chr4_3:34528488-34528507 Msa0638900:CDS 35.0%
CAATTATGTTCTCAAGGCAA+TGG + chr4_3:34528494-34528513 Msa0638900:CDS 35.0%
! AACATGTTTGAAACTGACTG+AGG - chr4_3:34528621-34528640 None:intergenic 35.0%
CTCTTGCCTTTAATATTCCA+GGG - chr4_3:34528671-34528690 None:intergenic 35.0%
ACTCTTGCCTTTAATATTCC+AGG - chr4_3:34528672-34528691 None:intergenic 35.0%
AGAGTTACGGTAAAAATACG+CGG - chr4_3:34528927-34528946 None:intergenic 35.0%
TGATTCTCTCTTACTACATG+GGG - chr4_3:34528956-34528975 None:intergenic 35.0%
CTGATTCTCTCTTACTACAT+GGG - chr4_3:34528957-34528976 None:intergenic 35.0%
! ACTGATTCTCTCTTACTACA+TGG - chr4_3:34528958-34528977 None:intergenic 35.0%
ATCGGTAACCTATACAACAT+AGG + chr4_3:34528986-34529005 Msa0638900:three_prime_UTR 35.0%
TTCGGGATTCACTAATTTAC+AGG + chr4_3:34529014-34529033 Msa0638900:three_prime_UTR 35.0%
TCGGGATTCACTAATTTACA+GGG + chr4_3:34529015-34529034 Msa0638900:three_prime_UTR 35.0%
CAGTAATTTAGCAAGTCTAG+TGG + chr4_3:34529190-34529209 Msa0638900:intron 35.0%
AAGTCTAGTGGGAAATTGAT+TGG + chr4_3:34529202-34529221 Msa0638900:intron 35.0%
CGGCTTAACTCGATAAAAAT+TGG + chr4_3:34529345-34529364 Msa0638900:intron 35.0%
CATGGAATAAGTGATGTTTC+GGG - chr4_3:34529497-34529516 None:intergenic 35.0%
AGCAACACCATTTAGATTTG+AGG - chr4_3:34529628-34529647 None:intergenic 35.0%
!! GACTCGGTTGATAAAAAGAT+AGG + chr4_3:34529869-34529888 Msa0638900:intron 35.0%
TTTGTAACAATACGAGCGTA+GGG + chr4_3:34529898-34529917 Msa0638900:intron 35.0%
TACTAGGGATTGGAGAATTT+AGG + chr4_3:34529922-34529941 Msa0638900:intron 35.0%
AAAAGTAGATCTGATAGAGG+GGG - chr4_3:34529997-34530016 None:intergenic 35.0%
GGAAAAAGTAGATCTGATAG+AGG - chr4_3:34530000-34530019 None:intergenic 35.0%
GCGGAAATGAAATTGAAGAA+GGG - chr4_3:34530069-34530088 None:intergenic 35.0%
TGCGGAAATGAAATTGAAGA+AGG - chr4_3:34530070-34530089 None:intergenic 35.0%
!! GAGGAAGAATTTGAGTTGTA+GGG - chr4_3:34530110-34530129 None:intergenic 35.0%
!! TGAGGAAGAATTTGAGTTGT+AGG - chr4_3:34530111-34530130 None:intergenic 35.0%
!! CGATTTCTGAAGTGAAATGA+TGG - chr4_3:34530139-34530158 None:intergenic 35.0%
GCAAAACCTTAATTGAGAGA+GGG - chr4_3:34530182-34530201 None:intergenic 35.0%
AGCAAAACCTTAATTGAGAG+AGG - chr4_3:34530183-34530202 None:intergenic 35.0%
CATGTCATGCAAATTGCTTA+TGG + chr4_3:34530448-34530467 Msa0638900:intron 35.0%
CTTGTGATGCAAATTGCTTA+TGG + chr4_3:34530510-34530529 Msa0638900:intron 35.0%
! TTTTCTTCTTGCTACTGCAT+AGG - chr4_3:34530546-34530565 None:intergenic 35.0%
AGTAGCAAGAAGAAAAAGAG+AGG + chr4_3:34530550-34530569 Msa0638900:intron 35.0%
TGTGAGAAGGTAGAAAGTAA+AGG + chr4_3:34526376-34526395 Msa0638900:intron 35.0%
AGGAAGAACAACTTACAATG+AGG + chr4_3:34526396-34526415 Msa0638900:intron 35.0%
!!! TAGCTTTTTTTTGGGGATGA+AGG + chr4_3:34531509-34531528 Msa0638900:intron 35.0%
ATTATTGGGTCAAGAACTTG+TGG + chr4_3:34531546-34531565 Msa0638900:intron 35.0%
GATTATGGACGGATGATAAA+AGG - chr4_3:34531584-34531603 None:intergenic 35.0%
AAGGAGAGAAAACCTTATCA+GGG - chr4_3:34531754-34531773 None:intergenic 35.0%
AAAGGAGAGAAAACCTTATC+AGG - chr4_3:34531755-34531774 None:intergenic 35.0%
ATGAGAAAAACATTCGTCGA+AGG + chr4_3:34531868-34531887 Msa0638900:intron 35.0%
TGAGAAAAACATTCGTCGAA+GGG + chr4_3:34531869-34531888 Msa0638900:intron 35.0%
ATATCATTCAGACTAGTACG+AGG - chr4_3:34531972-34531991 None:intergenic 35.0%
CAGGTAAAGCATAAGATACA+TGG - chr4_3:34532043-34532062 None:intergenic 35.0%
TTAGCTCAGAATATCATTGC+AGG - chr4_3:34532062-34532081 None:intergenic 35.0%
TGCAATTTCAAATGCAGCAA+AGG - chr4_3:34532248-34532267 None:intergenic 35.0%
TATTGTCGCATCAAGTTTGT+AGG + chr4_3:34532323-34532342 Msa0638900:intron 35.0%
AATAGAGGAAGTTGAGATGA+TGG - chr4_3:34532445-34532464 None:intergenic 35.0%
!!! TGTTTTGTTTCGTTTCCCAT+AGG + chr4_3:34532469-34532488 Msa0638900:intron 35.0%
ATCATGTTTGACACTGAATG+TGG + chr4_3:34532510-34532529 Msa0638900:intron 35.0%
TCATGTTTGACACTGAATGT+GGG + chr4_3:34532511-34532530 Msa0638900:intron 35.0%
! AAATTGGCAACATTTGCTAC+TGG - chr4_3:34532625-34532644 None:intergenic 35.0%
ATATAAAGCCAAAAGGCAAC+CGG - chr4_3:34532906-34532925 None:intergenic 35.0%
TGAGCAGATATAAAGCCAAA+AGG - chr4_3:34532913-34532932 None:intergenic 35.0%
ATATCTGCTCAATGCTATGT+TGG + chr4_3:34532922-34532941 Msa0638900:intron 35.0%
TATCTGCTCAATGCTATGTT+GGG + chr4_3:34532923-34532942 Msa0638900:intron 35.0%
GGTAAAACTTCACTTTCCTT+TGG + chr4_3:34533163-34533182 Msa0638900:intron 35.0%
TAACTTAGAAAGAACGCCAA+AGG - chr4_3:34533182-34533201 None:intergenic 35.0%
TTGGCGTTCTTTCTAAGTTA+TGG + chr4_3:34533182-34533201 Msa0638900:intron 35.0%
AAGTTATGGCGTGATTATCT+AGG + chr4_3:34533196-34533215 Msa0638900:intron 35.0%
TTCTTTCTGTTGCCTCTATT+CGG - chr4_3:34533310-34533329 None:intergenic 35.0%
TGACGACAATTATGTGCTTA+AGG + chr4_3:34533461-34533480 Msa0638900:intron 35.0%
CAATTATGTGCTTAAGGCAA+TGG + chr4_3:34533467-34533486 Msa0638900:intron 35.0%
GTTACACACAATGTTACAGA+TGG + chr4_3:34533519-34533538 Msa0638900:intron 35.0%
CTCTTGCCTTTAATATTCCA+GGG - chr4_3:34528671-34528690 None:intergenic 35.0%
ACTCTTGCCTTTAATATTCC+AGG - chr4_3:34528672-34528691 None:intergenic 35.0%
! TTGATGGCTAACAATCACAA+AGG - chr4_3:34533756-34533775 None:intergenic 35.0%
ATACAGACAAGTCATTTGGT+AGG + chr4_3:34533775-34533794 Msa0638900:three_prime_UTR 35.0%
CGTTTGCCTCTTTATTGTTT+AGG + chr4_3:34533815-34533834 Msa0638900:three_prime_UTR 35.0%
AGTTACCACAAAAAATGTGG+AGG - chr4_3:34533891-34533910 None:intergenic 35.0%
GATTTAGGAGTTATGCAGGT+AGG + chr4_3:34524506-34524525 Msa0638900:five_prime_UTR 40.0%
!! AGGTTGTGATGGATTAACAG+CGG - chr4_3:34524633-34524652 None:intergenic 40.0%
AGCTTCAAAATCCTCACTAC+AGG + chr4_3:34524788-34524807 Msa0638900:five_prime_UTR 40.0%
TCAAAATCCTCACTACAGGA+TGG + chr4_3:34524792-34524811 Msa0638900:exon 40.0%
CAAAATCCTCACTACAGGAT+GGG + chr4_3:34524793-34524812 Msa0638900:exon 40.0%
!! TTTAGCTTGGGATGAGATTC+TGG + chr4_3:34525131-34525150 Msa0638900:intron 40.0%
TGATATACTGGACTTGAACC+TGG + chr4_3:34525242-34525261 Msa0638900:intron 40.0%
GTGAACAAACGTTATGGAAG+CGG + chr4_3:34525349-34525368 Msa0638900:intron 40.0%
GGTACTGCATAAACATTGAG+TGG - chr4_3:34525795-34525814 None:intergenic 40.0%
GTACCAAGAAGAAAAAGCGA+CGG + chr4_3:34525810-34525829 Msa0638900:intron 40.0%
TACCAAGAAGAAAAAGCGAC+GGG + chr4_3:34525811-34525830 Msa0638900:CDS 40.0%
CTCCGGCAATTTAGTATGAA+AGG + chr4_3:34525863-34525882 Msa0638900:CDS 40.0%
AGGATAAGTGCAACTTTGCA+AGG - chr4_3:34525950-34525969 None:intergenic 40.0%
TGCTTCGATAAGCTATTGTG+AGG - chr4_3:34526064-34526083 None:intergenic 40.0%
TCAGCATTCAGCATACTAAG+GGG - chr4_3:34526210-34526229 None:intergenic 40.0%
CTCAGCATTCAGCATACTAA+GGG - chr4_3:34526211-34526230 None:intergenic 40.0%
ACTCAGCATTCAGCATACTA+AGG - chr4_3:34526212-34526231 None:intergenic 40.0%
AATTGTGAAACTTGCAGCAG+TGG + chr4_3:34526243-34526262 Msa0638900:intron 40.0%
! ATTTTCTGCAGTGTGTGAGA+AGG + chr4_3:34526363-34526382 Msa0638900:intron 40.0%
! TGAGAACTGTGCTTTTAACG+TGG - chr4_3:34526451-34526470 None:intergenic 40.0%
TTGTCAATGATTAAGCACGG+TGG + chr4_3:34526670-34526689 Msa0638900:intron 40.0%
!!! GATTAAGCACGGTGGTTTTT+TGG + chr4_3:34526678-34526697 Msa0638900:intron 40.0%
! TTTTCTGATCCAAGCAATGG+TGG + chr4_3:34526908-34526927 Msa0638900:CDS 40.0%
ATGAGAAAAACATCCGTCGA+AGG + chr4_3:34527063-34527082 Msa0638900:CDS 40.0%
TGAGAAAAACATCCGTCGAA+GGG + chr4_3:34527064-34527083 Msa0638900:CDS 40.0%
GGCTTAGGAGTAGAATTGAA+AGG + chr4_3:34527313-34527332 Msa0638900:CDS 40.0%
TTAATACCGGAATGCTAACC+TGG + chr4_3:34527394-34527413 Msa0638900:intron 40.0%
AAAGGCAGATACTGAGATGA+TGG - chr4_3:34527632-34527651 None:intergenic 40.0%
!! ACTTTCTAAGATCCATGACC+AGG - chr4_3:34528003-34528022 None:intergenic 40.0%
! TACACTAGTTTCCACTTTCC+GGG - chr4_3:34528310-34528329 None:intergenic 40.0%
TCCTATTGTGGTCAAACACT+CGG + chr4_3:34528330-34528349 Msa0638900:intron 40.0%
ATAAGTCTTGGGAGCTAGTT+AGG + chr4_3:34528377-34528396 Msa0638900:intron 40.0%
TAAGTCTTGGGAGCTAGTTA+GGG + chr4_3:34528378-34528397 Msa0638900:intron 40.0%
!! GTTCTCAAGGCAATGGATTT+TGG + chr4_3:34528501-34528520 Msa0638900:CDS 40.0%
!! TCAAGGCAATGGATTTTGGT+GGG + chr4_3:34528505-34528524 Msa0638900:CDS 40.0%
TGTGTAACATTGTCACTCTG+TGG - chr4_3:34528540-34528559 None:intergenic 40.0%
GTTACACACAATATTGCGGA+TGG + chr4_3:34528552-34528571 Msa0638900:CDS 40.0%
TTTAATATTCCAGGGAGTGG+AGG - chr4_3:34528663-34528682 None:intergenic 40.0%
TCCACTCCCTGGAATATTAA+AGG + chr4_3:34528662-34528681 Msa0638900:CDS 40.0%
GTTAGTCATCAGTACAGCTT+TGG + chr4_3:34528796-34528815 Msa0638900:three_prime_UTR 40.0%
ATTCTCTCTTACTACATGGG+GGG - chr4_3:34528954-34528973 None:intergenic 40.0%
GATTCTCTCTTACTACATGG+GGG - chr4_3:34528955-34528974 None:intergenic 40.0%
ATACCAACAACACAAGCAAC+AGG - chr4_3:34529118-34529137 None:intergenic 40.0%
ATACTTGAGCAAATGCAGAC+CGG - chr4_3:34529246-34529265 None:intergenic 40.0%
ACTCAAGTTCGCAAACATCT+TGG + chr4_3:34529384-34529403 Msa0638900:intron 40.0%
!! AAGTGATGTTTCGGGTTTGT+GGG - chr4_3:34529489-34529508 None:intergenic 40.0%
!! TAAGTGATGTTTCGGGTTTG+TGG - chr4_3:34529490-34529509 None:intergenic 40.0%
!!! TGTGTTTTGGTTGTCATGGA+TGG - chr4_3:34529760-34529779 None:intergenic 40.0%
!!! ATGGTGTGTTTTGGTTGTCA+TGG - chr4_3:34529764-34529783 None:intergenic 40.0%
CTTTGTAACAATACGAGCGT+AGG + chr4_3:34529897-34529916 Msa0638900:intron 40.0%
! TGTTTGTTGAGTAGCAGCAA+CGG - chr4_3:34529965-34529984 None:intergenic 40.0%
!!! AGATCTACTTTTTCCCTCAC+CGG + chr4_3:34530005-34530024 Msa0638900:intron 40.0%
AAATTGAAGAAGGGAAAGGG+CGG - chr4_3:34530060-34530079 None:intergenic 40.0%
CGAAGAGGAAACTACGATTT+CGG + chr4_3:34530243-34530262 Msa0638900:intron 40.0%
GAAGAGGAAACTACGATTTC+GGG + chr4_3:34530244-34530263 Msa0638900:intron 40.0%
AACTTACGCAACTACTCCTT+GGG - chr4_3:34530407-34530426 None:intergenic 40.0%
AAACTTACGCAACTACTCCT+TGG - chr4_3:34530408-34530427 None:intergenic 40.0%
!! TCTTCCACTTTTATCACCTC+CGG - chr4_3:34530590-34530609 None:intergenic 40.0%
GAGGTGATAAAAGTGGAAGA+GGG + chr4_3:34530590-34530609 Msa0638900:intron 40.0%
CTTCGCCAATTTAGCATGAA+AGG + chr4_3:34530613-34530632 Msa0638900:intron 40.0%
!! TCCAGGTTTCATAGTTTGCT+AGG - chr4_3:34530692-34530711 None:intergenic 40.0%
!! TGGATACCTAGTACTGATGT+GGG + chr4_3:34530708-34530727 Msa0638900:intron 40.0%
GGGTACATGTGAGAAATTAG+TGG - chr4_3:34530982-34531001 None:intergenic 40.0%
TGATACGGATGTCTCCAATT+TGG + chr4_3:34531155-34531174 Msa0638900:intron 40.0%
GTCTCCAATTTGGATTATCC+AGG + chr4_3:34531165-34531184 Msa0638900:intron 40.0%
GAAGCCTGGATAATCCAAAT+TGG - chr4_3:34531172-34531191 None:intergenic 40.0%
!! CGTGCTGACAATTTTCTTTC+TGG + chr4_3:34531304-34531323 Msa0638900:intron 40.0%
GTTCTTTGTAGTGTGTGAGA+AGG + chr4_3:34531349-34531368 Msa0638900:intron 40.0%
CAACTTACAATGAGGTTAGC+TGG + chr4_3:34531390-34531409 Msa0638900:intron 40.0%
AGGAGAGAAAACCTTATCAG+GGG - chr4_3:34531753-34531772 None:intergenic 40.0%
!!! GACTTACTTTTTGTGGGGAT+TGG + chr4_3:34531824-34531843 Msa0638900:intron 40.0%
! TGATGCTCTGAATGTTCTCA+TGG + chr4_3:34531896-34531915 Msa0638900:intron 40.0%
TCTGAATGTTCTCATGGCAA+TGG + chr4_3:34531902-34531921 Msa0638900:intron 40.0%
! ATTTAACAGACAGAGCGTCT+TGG + chr4_3:34532123-34532142 Msa0638900:intron 40.0%
! TTTAACAGACAGAGCGTCTT+GGG + chr4_3:34532124-34532143 Msa0638900:intron 40.0%
GGCTCAGGAATAGAATTGAA+AGG + chr4_3:34532145-34532164 Msa0638900:intron 40.0%
AAGGAAATCATCCTATCTGC+AGG + chr4_3:34532164-34532183 Msa0638900:intron 40.0%
AACATGATTACCTCCAGTGA+AGG - chr4_3:34532498-34532517 None:intergenic 40.0%
ATCAAAAGAGACACCAACTG+AGG - chr4_3:34532594-34532613 None:intergenic 40.0%
GTACATGTTGTGCAGTGAAT+TGG - chr4_3:34532678-34532697 None:intergenic 40.0%
TGCTTACAAAAGCGGGAAAA+AGG - chr4_3:34532786-34532805 None:intergenic 40.0%
TGGTCGAGTTCACTTTATTC+CGG + chr4_3:34532884-34532903 Msa0638900:intron 40.0%
! ACTTTATTCCGGTTGCCTTT+TGG + chr4_3:34532895-34532914 Msa0638900:intron 40.0%
GGGTCTATACGTTGAATTCT+TGG + chr4_3:34532943-34532962 Msa0638900:intron 40.0%
CGTGATTATCTAGGTCTGAA+TGG + chr4_3:34533205-34533224 Msa0638900:intron 40.0%
GGAACTAGTGTCTCCTATTA+TGG + chr4_3:34533284-34533303 Msa0638900:intron 40.0%
TTGTCGTCATGCAACTCAAA+AGG - chr4_3:34533450-34533469 None:intergenic 40.0%
GTGCTTAAGGCAATGGAATT+TGG + chr4_3:34533474-34533493 Msa0638900:intron 40.0%
ACACACAATGTTACAGATGG+AGG + chr4_3:34533522-34533541 Msa0638900:intron 40.0%
CACACAATGTTACAGATGGA+GGG + chr4_3:34533523-34533542 Msa0638900:intron 40.0%
ACACAATGTTACAGATGGAG+GGG + chr4_3:34533524-34533543 Msa0638900:intron 40.0%
TTTAATATTCCAGGGAGTGG+AGG - chr4_3:34528663-34528682 None:intergenic 40.0%
TCCACTCCCTGGAATATTAA+AGG + chr4_3:34528662-34528681 Msa0638900:CDS 40.0%
CCAAGGTAGTAATTGATGGA+TGG - chr4_3:34533857-34533876 None:intergenic 40.0%
CCATCCATCAATTACTACCT+TGG + chr4_3:34533854-34533873 Msa0638900:three_prime_UTR 40.0%
TCTGCCAAGGTAGTAATTGA+TGG - chr4_3:34533861-34533880 None:intergenic 40.0%
TGGAGGAAAAAAATCTGCCA+AGG - chr4_3:34533874-34533893 None:intergenic 40.0%
TGATCTCTCTAGCTACAATG+CGG - chr4_3:34533918-34533937 None:intergenic 40.0%
CATTGTAGCTAGAGAGATCA+TGG + chr4_3:34533918-34533937 Msa0638900:three_prime_UTR 40.0%
TAGCTAGAGAGATCATGGAA+TGG + chr4_3:34533923-34533942 Msa0638900:three_prime_UTR 40.0%
TAGGAGTTATGCAGGTAGGA+TGG + chr4_3:34524510-34524529 Msa0638900:five_prime_UTR 45.0%
AGGAGTTATGCAGGTAGGAT+GGG + chr4_3:34524511-34524530 Msa0638900:five_prime_UTR 45.0%
GAGGGAAAGAGGAGATCTTA+GGG - chr4_3:34524598-34524617 None:intergenic 45.0%
GATTAACAGCGGCGGTTATT+CGG - chr4_3:34524622-34524641 None:intergenic 45.0%
!! TTGTGATGGATTAACAGCGG+CGG - chr4_3:34524630-34524649 None:intergenic 45.0%
TAGGGCACGCAATATGAAGA+AGG - chr4_3:34524737-34524756 None:intergenic 45.0%
TTCTTCATATTGCGTGCCCT+AGG + chr4_3:34524736-34524755 Msa0638900:five_prime_UTR 45.0%
TCTTCATATTGCGTGCCCTA+GGG + chr4_3:34524737-34524756 Msa0638900:five_prime_UTR 45.0%
ACGAAGGGAGAAAAACCCTA+GGG - chr4_3:34524755-34524774 None:intergenic 45.0%
AACGAAGGGAGAAAAACCCT+AGG - chr4_3:34524756-34524775 None:intergenic 45.0%
GAAGAGGACGAGGAATTGAT+GGG + chr4_3:34524844-34524863 Msa0638900:CDS 45.0%
TTTGAGAGCAGCGTTATCAC+CGG - chr4_3:34524962-34524981 None:intergenic 45.0%
! GTTATGGATTGTGGTCGTTG+CGG - chr4_3:34525621-34525640 None:intergenic 45.0%
! GGATGTTGCGTTATGGATTG+TGG - chr4_3:34525630-34525649 None:intergenic 45.0%
CTGTTACGGATGTTGCGTTA+TGG - chr4_3:34525637-34525656 None:intergenic 45.0%
GGGGTGATAAGAATGGAAGA+GGG + chr4_3:34525840-34525859 Msa0638900:CDS 45.0%
ATAAGAATGGAAGAGGGCTC+CGG + chr4_3:34525846-34525865 Msa0638900:CDS 45.0%
!!! TTTTGGGATCAAGTTGTCCG+TGG + chr4_3:34526695-34526714 Msa0638900:intron 45.0%
TTAGCCTCAGAAACTGGTAG+TGG + chr4_3:34526724-34526743 Msa0638900:intron 45.0%
AAGTCCACTACCAGTTTCTG+AGG - chr4_3:34526731-34526750 None:intergenic 45.0%
ACAACATGAAATGGGTAGGC+AGG - chr4_3:34526762-34526781 None:intergenic 45.0%
ATAGGTGGCAGATGAACTTG+TGG + chr4_3:34526880-34526899 Msa0638900:intron 45.0%
ATATCACTCAGACTGGTACG+AGG - chr4_3:34527167-34527186 None:intergenic 45.0%
! CTGTATCTTTTCTCTCTGCG+TGG + chr4_3:34527216-34527235 Msa0638900:intron 45.0%
AGCAATCCAGGTTAGCATTC+CGG - chr4_3:34527403-34527422 None:intergenic 45.0%
GGTAAAGATACACCTCCACT+GGG - chr4_3:34527588-34527607 None:intergenic 45.0%
AGGTAAAGATACACCTCCAC+TGG - chr4_3:34527589-34527608 None:intergenic 45.0%
GGGTTTATACGGAGAATTCC+TGG + chr4_3:34527982-34528001 Msa0638900:intron 45.0%
ATACGGAGAATTCCTGGTCA+TGG + chr4_3:34527988-34528007 Msa0638900:intron 45.0%
GTATCATAAAGCCCGGAAAG+TGG + chr4_3:34528296-34528315 Msa0638900:intron 45.0%
TCCGAGTGTTTGACCACAAT+AGG - chr4_3:34528334-34528353 None:intergenic 45.0%
!! CTCAAGGCAATGGATTTTGG+TGG + chr4_3:34528504-34528523 Msa0638900:CDS 45.0%
!! CAAGGCAATGGATTTTGGTG+GGG + chr4_3:34528506-34528525 Msa0638900:CDS 45.0%
!! AAGGCAATGGATTTTGGTGG+GGG + chr4_3:34528507-34528526 Msa0638900:CDS 45.0%
ACACACAATATTGCGGATGG+AGG + chr4_3:34528555-34528574 Msa0638900:CDS 45.0%
CACACAATATTGCGGATGGA+GGG + chr4_3:34528556-34528575 Msa0638900:CDS 45.0%
ACACAATATTGCGGATGGAG+GGG + chr4_3:34528557-34528576 Msa0638900:CDS 45.0%
GTCAGGCATGTATCAATCAC+AGG + chr4_3:34528593-34528612 Msa0638900:CDS 45.0%
GCCTTTAATATTCCAGGGAG+TGG - chr4_3:34528666-34528685 None:intergenic 45.0%
! GTCATCAGTACAGCTTTGGT+AGG + chr4_3:34528800-34528819 Msa0638900:three_prime_UTR 45.0%
! CTTTATCGTTTGGGGTAGAC+TGG + chr4_3:34528849-34528868 Msa0638900:three_prime_UTR 45.0%
ACAGGACAAGCAAGATGCAT+TGG - chr4_3:34529100-34529119 None:intergenic 45.0%
! TGTCCTGTTGCTTGTGTTGT+TGG + chr4_3:34529112-34529131 Msa0638900:three_prime_UTR 45.0%
ATGGACAGTACGAAACGGAA+GGG - chr4_3:34529150-34529169 None:intergenic 45.0%
TATGGACAGTACGAAACGGA+AGG - chr4_3:34529151-34529170 None:intergenic 45.0%
TACTTGAGCAAATGCAGACC+GGG - chr4_3:34529245-34529264 None:intergenic 45.0%
GAGTCGATCCAAACTTGACT+CGG + chr4_3:34529325-34529344 Msa0638900:intron 45.0%
GAGTTAAGCCGAGTCAAGTT+TGG - chr4_3:34529336-34529355 None:intergenic 45.0%
TCTGTATTACGTACGCCTCA+AGG + chr4_3:34529666-34529685 Msa0638900:intron 45.0%
AATACGAGCGTAGGGATACT+AGG + chr4_3:34529906-34529925 Msa0638900:intron 45.0%
ATACGAGCGTAGGGATACTA+GGG + chr4_3:34529907-34529926 Msa0638900:intron 45.0%
AATTGAAGAAGGGAAAGGGC+GGG - chr4_3:34530059-34530078 None:intergenic 45.0%
!! AGTGAAATGATGGAGTGCTG+AGG - chr4_3:34530129-34530148 None:intergenic 45.0%
TTGCAGCCCTCTCTCAATTA+AGG + chr4_3:34530173-34530192 Msa0638900:intron 45.0%
! AAGGTTTTGCTGCCAAACGA+TGG + chr4_3:34530192-34530211 Msa0638900:intron 45.0%
! AGGTTTTGCTGCCAAACGAT+GGG + chr4_3:34530193-34530212 Msa0638900:intron 45.0%
ACTACGATTTCGGGACAATC+AGG + chr4_3:34530253-34530272 Msa0638900:intron 45.0%
GGAGGTGATAAAAGTGGAAG+AGG + chr4_3:34530589-34530608 Msa0638900:intron 45.0%
GCCTAGCAAACTATGAAACC+TGG + chr4_3:34530688-34530707 Msa0638900:intron 45.0%
CACATCAGTACTAGGTATCC+AGG - chr4_3:34530709-34530728 None:intergenic 45.0%
!! CTGGATACCTAGTACTGATG+TGG + chr4_3:34530707-34530726 Msa0638900:intron 45.0%
CAAGACAGTACAGTGCAGTA+TGG - chr4_3:34530778-34530797 None:intergenic 45.0%
ACTTCACGAATACTCACTCG+TGG - chr4_3:34531115-34531134 None:intergenic 45.0%
GGGGTCAAAACACTGTTGAT+TGG - chr4_3:34531734-34531753 None:intergenic 45.0%
!!! CAGTGTTTTGACCCCTGATA+AGG + chr4_3:34531739-34531758 Msa0638900:intron 45.0%
GGTAAAGATACACCTCCACT+GGG - chr4_3:34527588-34527607 None:intergenic 45.0%
AGGTAAAGATACACCTCCAC+TGG - chr4_3:34527589-34527608 None:intergenic 45.0%
AAGAGACACCAACTGAGGTT+GGG - chr4_3:34532589-34532608 None:intergenic 45.0%
AAAGAGACACCAACTGAGGT+TGG - chr4_3:34532590-34532609 None:intergenic 45.0%
TACGTTGAATTCTTGGCCAC+AGG + chr4_3:34532950-34532969 Msa0638900:intron 45.0%
! GAAGAATTTGCTTGTCCTGC+TGG + chr4_3:34532999-34533018 Msa0638900:intron 45.0%
GGATGTGATATGGCTCTTAG+TGG + chr4_3:34533023-34533042 Msa0638900:intron 45.0%
TCCTCATGCAACTGTTGAAG+TGG + chr4_3:34533098-34533117 Msa0638900:intron 45.0%
TCCACTTCAACAGTTGCATG+AGG - chr4_3:34533102-34533121 None:intergenic 45.0%
CTCCTATTATGGCCGAATAG+AGG + chr4_3:34533295-34533314 Msa0638900:intron 45.0%
TGCCTCTATTCGGCCATAAT+AGG - chr4_3:34533300-34533319 None:intergenic 45.0%
!!! TCATGTAGAGAGGTTTTGGG+AGG + chr4_3:34533333-34533352 Msa0638900:intron 45.0%
AATGTTACAGATGGAGGGGA+AGG + chr4_3:34533528-34533547 Msa0638900:intron 45.0%
GCCTTTAATATTCCAGGGAG+TGG - chr4_3:34528666-34528685 None:intergenic 45.0%
GATCTCTCTAGCTACAATGC+GGG - chr4_3:34533917-34533936 None:intergenic 45.0%
GGAATGGAGTCCAACAACAT+AGG + chr4_3:34533939-34533958 Msa0638900:three_prime_UTR 45.0%
CATTTGATAGGGTCCTTGTG+AGG + chr4_3:34534063-34534082 Msa0638900:three_prime_UTR 45.0%
!! AAAAAAAAATATAAGTAATA+CGG - chr4_3:34526799-34526818 None:intergenic 5.0%
!!! TTTAATCAAATTTATATTTT+TGG - chr4_3:34527277-34527296 None:intergenic 5.0%
!!! TTTTATATAAAATATTTTAC+CGG - chr4_3:34531061-34531080 None:intergenic 5.0%
! GGGGGCACGAAATACGAATA+CGG - chr4_3:34524570-34524589 None:intergenic 50.0%
AGAGGAGATCTTAGGGAACG+CGG - chr4_3:34524591-34524610 None:intergenic 50.0%
CGAGGGAAAGAGGAGATCTT+AGG - chr4_3:34524599-34524618 None:intergenic 50.0%
AGAGAGAGGTGAGGTTGTGA+TGG - chr4_3:34524644-34524663 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr4_3:34524656-34524675 None:intergenic 50.0%
CGAAGAGGACGAGGAATTGA+TGG + chr4_3:34524843-34524862 Msa0638900:CDS 50.0%
!! GACGAGGAATTGATGGGTTG+TGG + chr4_3:34524850-34524869 Msa0638900:CDS 50.0%
GGTTGTGGAACTACGCTTTC+CGG + chr4_3:34524865-34524884 Msa0638900:CDS 50.0%
AAACGTTATGGAAGCGGCCA+TGG + chr4_3:34525355-34525374 Msa0638900:intron 50.0%
ATGGAAGCGGCCATGGTAAT+TGG + chr4_3:34525362-34525381 Msa0638900:intron 50.0%
!!! AGCCCGTCGCTTTTTCTTCT+TGG - chr4_3:34525816-34525835 None:intergenic 50.0%
!! AAGAAAAAGCGACGGGCTGT+TGG + chr4_3:34525818-34525837 Msa0638900:CDS 50.0%
!! AGAAAAAGCGACGGGCTGTT+GGG + chr4_3:34525819-34525838 Msa0638900:CDS 50.0%
GCTGTTGGGGGTGATAAGAA+TGG + chr4_3:34525833-34525852 Msa0638900:CDS 50.0%
GGGGGTGATAAGAATGGAAG+AGG + chr4_3:34525839-34525858 Msa0638900:CDS 50.0%
GAGCATCATAGACCCTTCGA+CGG - chr4_3:34527079-34527098 None:intergenic 50.0%
AAGGAAAGCAGCCTATCTGC+AGG + chr4_3:34527332-34527351 Msa0638900:CDS 50.0%
AAAGATACACCTCCACTGGG+AGG - chr4_3:34527585-34527604 None:intergenic 50.0%
TGCTGTGATGTGGCTCCTAT+TGG + chr4_3:34528064-34528083 Msa0638900:intron 50.0%
TCCTCATGCAACTGTGGAAG+TGG + chr4_3:34528132-34528151 Msa0638900:CDS 50.0%
TCCACTTCCACAGTTGCATG+AGG - chr4_3:34528136-34528155 None:intergenic 50.0%
! TGGTGCTTTTGTCCCTGTGT+TGG + chr4_3:34528406-34528425 Msa0638900:intron 50.0%
TTGTCGTCATGCAGCTCGAA+AGG - chr4_3:34528477-34528496 None:intergenic 50.0%
AATATTGCGGATGGAGGGGA+AGG + chr4_3:34528561-34528580 Msa0638900:CDS 50.0%
TCTCTTACTACATGGGGGGA+AGG - chr4_3:34528950-34528969 None:intergenic 50.0%
GTCTTCATGACTGCAATGCC+CGG + chr4_3:34529224-34529243 Msa0638900:intron 50.0%
AGCGTAGGGATACTAGGGAT+TGG + chr4_3:34529912-34529931 Msa0638900:intron 50.0%
GCAGCAACGGAATACGAATG+CGG - chr4_3:34529952-34529971 None:intergenic 50.0%
TAGATCTGATAGAGGGGGAG+CGG - chr4_3:34529992-34530011 None:intergenic 50.0%
AGAGGGCTGCAATTCAGTTG+CGG - chr4_3:34530165-34530184 None:intergenic 50.0%
GCGATCTTGTTCCCATCGTT+TGG - chr4_3:34530207-34530226 None:intergenic 50.0%
TCTGAGAGCAGTGCTATCAC+CGG - chr4_3:34530347-34530366 None:intergenic 50.0%
! GATGATGATGCTGCATCCCA+AGG + chr4_3:34530388-34530407 Msa0638900:intron 50.0%
AGAGGCCAACAAAGAGCTAC+CGG + chr4_3:34530568-34530587 Msa0638900:intron 50.0%
GCTACCGGAGGTGATAAAAG+TGG + chr4_3:34530583-34530602 Msa0638900:intron 50.0%
ATCGCACCCACATCAGTACT+AGG - chr4_3:34530717-34530736 None:intergenic 50.0%
CGTTGCTAGCAAAGCACGTT+TGG + chr4_3:34531191-34531210 Msa0638900:intron 50.0%
GTAGGTGGCAGATGAACTTG+TGG + chr4_3:34531694-34531713 Msa0638900:intron 50.0%
ATCCTATCTGCAGGAGCTAG+AGG + chr4_3:34532173-34532192 Msa0638900:intron 50.0%
! TTCCTCTAGCTCCTGCAGAT+AGG - chr4_3:34532178-34532197 None:intergenic 50.0%
AAAGATACACCTCCACTGGG+AGG - chr4_3:34527585-34527604 None:intergenic 50.0%
TTCCCATAGGCTTCCTTCAC+TGG + chr4_3:34532482-34532501 Msa0638900:intron 50.0%
CTCCAGTGAAGGAAGCCTAT+GGG - chr4_3:34532487-34532506 None:intergenic 50.0%
GTCTCCCATAACGTGAAACC+CGG - chr4_3:34532549-34532568 None:intergenic 50.0%
GAGGTTGGGTATAGCAGAAG+AGG - chr4_3:34532575-34532594 None:intergenic 50.0%
CTGCTATACCCAACCTCAGT+TGG + chr4_3:34532578-34532597 Msa0638900:intron 50.0%
! GAATTTGCTTGTCCTGCTGG+CGG + chr4_3:34533002-34533021 Msa0638900:intron 50.0%
!!! GAGGTTTTGGGAGGCTGTTA+TGG + chr4_3:34533342-34533361 Msa0638900:intron 50.0%
GTTGACACGCTTGAAGCTGA+AGG - chr4_3:34533591-34533610 None:intergenic 50.0%
AGGAGATCTTAGGGAACGCG+GGG - chr4_3:34524589-34524608 None:intergenic 55.0%
GAGGAGATCTTAGGGAACGC+GGG - chr4_3:34524590-34524609 None:intergenic 55.0%
GGTTATTCGGCGAGGGAAAG+AGG - chr4_3:34524609-34524628 None:intergenic 55.0%
GAGAGAGAGAGAGAGAGGTG+AGG - chr4_3:34524653-34524672 None:intergenic 55.0%
TGCGTTCCCATCCTGTAGTG+AGG - chr4_3:34524802-34524821 None:intergenic 55.0%
TCGTCCACGGACGATTGATG+CGG - chr4_3:34524826-34524845 None:intergenic 55.0%
TCAATCGTCCGTGGACGAAG+AGG + chr4_3:34524828-34524847 Msa0638900:CDS 55.0%
TTCCTCGTCCTCTTCGTCCA+CGG - chr4_3:34524839-34524858 None:intergenic 55.0%
ACTACGCTTTCCGGCCAATC+AGG + chr4_3:34524874-34524893 Msa0638900:CDS 55.0%
TCCTGCTCGTTGAGCCTGAT+TGG - chr4_3:34524891-34524910 None:intergenic 55.0%
! TGATGACGATGCTGCTTCCC+AGG + chr4_3:34525002-34525021 Msa0638900:CDS 55.0%
GACTCACGCAACTACTGCCT+GGG - chr4_3:34525022-34525041 None:intergenic 55.0%
AGACTCACGCAACTACTGCC+TGG - chr4_3:34525023-34525042 None:intergenic 55.0%
!! GAAAAAGCGACGGGCTGTTG+GGG + chr4_3:34525820-34525839 Msa0638900:CDS 55.0%
!! AAAAAGCGACGGGCTGTTGG+GGG + chr4_3:34525821-34525840 Msa0638900:CDS 55.0%
CATGAAATGGGTAGGCAGGC+AGG - chr4_3:34526758-34526777 None:intergenic 55.0%
GGGGACAAACCACCATTGCT+TGG - chr4_3:34526920-34526939 None:intergenic 55.0%
! TGGTGGTTTGTCCCCTGATC+AGG + chr4_3:34526925-34526944 Msa0638900:CDS 55.0%
AGACACAGCGTCTTGGGCTT+AGG + chr4_3:34527298-34527317 Msa0638900:intron 55.0%
CTGCTCAAGCTCCTGCAGAT+AGG - chr4_3:34527346-34527365 None:intergenic 55.0%
AGCTCAGGAAATCCTCCCAG+TGG + chr4_3:34527570-34527589 Msa0638900:CDS 55.0%
TCAGGAAATCCTCCCAGTGG+AGG + chr4_3:34527573-34527592 Msa0638900:CDS 55.0%
! TCCTGTTGGCTGCTGTGATG+TGG + chr4_3:34528054-34528073 Msa0638900:intron 55.0%
GACACGTCCTCATGCAACTG+TGG + chr4_3:34528126-34528145 Msa0638900:intron 55.0%
GTCTTGGGAGCTAGTTAGGG+TGG + chr4_3:34528381-34528400 Msa0638900:intron 55.0%
! GGGGAAGGTTCTAGCATGTC+AGG + chr4_3:34528576-34528595 Msa0638900:CDS 55.0%
CATGGGGGGAAGGAGAGTTA+CGG - chr4_3:34528940-34528959 None:intergenic 55.0%
AGATCTGATAGAGGGGGAGC+GGG - chr4_3:34529991-34530010 None:intergenic 55.0%
! TGGTGAGGGATGGTGGTTAC+CGG - chr4_3:34530027-34530046 None:intergenic 55.0%
! GAAAGTACGGTGGTGAGGGA+TGG - chr4_3:34530037-34530056 None:intergenic 55.0%
AGGGAAAGGGCGGGAAAGTA+CGG - chr4_3:34530050-34530069 None:intergenic 55.0%
GCAATCGTGCGTAGACGAAG+AGG + chr4_3:34530228-34530247 Msa0638900:intron 55.0%
GACAATCAGGCTCAACCAGC+AGG + chr4_3:34530266-34530285 Msa0638900:intron 55.0%
CACCTCCGGTAGCTCTTTGT+TGG - chr4_3:34530576-34530595 None:intergenic 55.0%
GCTTTGCTAGCAACGAAGCC+TGG - chr4_3:34531186-34531205 None:intergenic 55.0%
!! AGCTCTGGAAATCCTCCCAG+TGG + chr4_3:34532383-34532402 Msa0638900:intron 55.0%
TCTGGAAATCCTCCCAGTGG+AGG + chr4_3:34532386-34532405 Msa0638900:intron 55.0%
CCTCCAGTGAAGGAAGCCTA+TGG - chr4_3:34532488-34532507 None:intergenic 55.0%
CCATAGGCTTCCTTCACTGG+AGG + chr4_3:34532485-34532504 Msa0638900:intron 55.0%
TCCAGCCGGGTTTCACGTTA+TGG + chr4_3:34532541-34532560 Msa0638900:intron 55.0%
CCAGCCGGGTTTCACGTTAT+GGG + chr4_3:34532542-34532561 Msa0638900:intron 55.0%
! TCCTGCTGGCGGATGTGATA+TGG + chr4_3:34533013-34533032 Msa0638900:intron 55.0%
! GGGGAAGGTTCTAGCATGTC+AGG + chr4_3:34528576-34528595 Msa0638900:CDS 55.0%
GTCAGGCATGCATCAGTCAC+AGG + chr4_3:34533560-34533579 Msa0638900:intron 55.0%
GACACGCTTGAAGCTGAAGG+AGG - chr4_3:34533588-34533607 None:intergenic 55.0%
TTGGTAGGTCAGCAGCAGCT+TGG + chr4_3:34533790-34533809 Msa0638900:three_prime_UTR 55.0%
AGACCACAGAGAGCCTCACA+AGG - chr4_3:34534079-34534098 None:intergenic 55.0%
GGAGATCTTAGGGAACGCGG+GGG - chr4_3:34524588-34524607 None:intergenic 60.0%
GCTCGTTGAGCCTGATTGGC+CGG - chr4_3:34524887-34524906 None:intergenic 60.0%
GCCAATCAGGCTCAACGAGC+AGG + chr4_3:34524887-34524906 Msa0638900:CDS 60.0%
ACTCCGGCTAGACGGTAACC+CGG - chr4_3:34524917-34524936 None:intergenic 60.0%
GTCTGCTCACTCCGGCTAGA+CGG - chr4_3:34524925-34524944 None:intergenic 60.0%
TAGCCGGAGTGAGCAGACCA+CGG + chr4_3:34524927-34524946 Msa0638900:CDS 60.0%
GAGAGCAGCGTTATCACCGG+CGG - chr4_3:34524959-34524978 None:intergenic 60.0%
GCCACATCACAGCAGCCAAC+AGG - chr4_3:34528058-34528077 None:intergenic 60.0%
GGGAGCTAGTTAGGGTGGTG+TGG + chr4_3:34528386-34528405 Msa0638900:intron 60.0%
CCAGGGAGTGGAGGTGATGT+CGG - chr4_3:34528654-34528673 None:intergenic 60.0%
GATCTGATAGAGGGGGAGCG+GGG - chr4_3:34529990-34530009 None:intergenic 60.0%
! GGGATGGTGGTTACCGGTGA+GGG - chr4_3:34530021-34530040 None:intergenic 60.0%
! AGGGATGGTGGTTACCGGTG+AGG - chr4_3:34530022-34530041 None:intergenic 60.0%
AGTACGGTGGTGAGGGATGG+TGG - chr4_3:34530034-34530053 None:intergenic 60.0%
! GCGGGAAAGTACGGTGGTGA+GGG - chr4_3:34530041-34530060 None:intergenic 60.0%
! GAAAGGGCGGGAAAGTACGG+TGG - chr4_3:34530047-34530066 None:intergenic 60.0%
GGCCAACAAAGAGCTACCGG+AGG + chr4_3:34530571-34530590 Msa0638900:intron 60.0%
! AGACAGAGCGTCTTGGGCTC+AGG + chr4_3:34532130-34532149 Msa0638900:intron 60.0%
ATGTGGGCACCTCTTCCAGC+CGG + chr4_3:34532527-34532546 Msa0638900:intron 60.0%
ACGTGAAACCCGGCTGGAAG+AGG - chr4_3:34532539-34532558 None:intergenic 60.0%
CCCATAACGTGAAACCCGGC+TGG - chr4_3:34532545-34532564 None:intergenic 60.0%
GCCATATCACATCCGCCAGC+AGG - chr4_3:34533017-34533036 None:intergenic 60.0%
GGGAGTGGAGGTGATGTTGG+AGG - chr4_3:34533618-34533637 None:intergenic 60.0%
CCAGGGAGTGGAGGTGATGT+TGG - chr4_3:34528654-34528673 None:intergenic 60.0%
CCAACATCACCTCCACTCCC+TGG + chr4_3:34533618-34533637 Msa0638900:intron 60.0%
GGTCCTTGTGAGGCTCTCTG+TGG + chr4_3:34534073-34534092 Msa0638900:three_prime_UTR 60.0%
CAGCGGCGGTTATTCGGCGA+GGG - chr4_3:34524616-34524635 None:intergenic 65.0%
ACAGCGGCGGTTATTCGGCG+AGG - chr4_3:34524617-34524636 None:intergenic 65.0%
GCAGCCGCATCAATCGTCCG+TGG + chr4_3:34524819-34524838 Msa0638900:CDS 65.0%
GTCCGTGGACGAAGAGGACG+AGG + chr4_3:34524834-34524853 Msa0638900:CDS 65.0%
! GGCTCAACGAGCAGGAGTGC+CGG + chr4_3:34524895-34524914 Msa0638900:CDS 65.0%
!! GCTCAACGAGCAGGAGTGCC+GGG + chr4_3:34524896-34524915 Msa0638900:CDS 65.0%
GTGCCGGGTTACCGTCTAGC+CGG + chr4_3:34524911-34524930 Msa0638900:CDS 65.0%
AGCCGGAGTGAGCAGACCAC+GGG + chr4_3:34524928-34524947 Msa0638900:CDS 65.0%
TCCCCGTGGTCTGCTCACTC+CGG - chr4_3:34524933-34524952 None:intergenic 65.0%
GGGAGTGGAGGTGATGTCGG+AGG - chr4_3:34528651-34528670 None:intergenic 65.0%
CCGACATCACCTCCACTCCC+TGG + chr4_3:34528651-34528670 Msa0638900:CDS 65.0%
! GGCGGGAAAGTACGGTGGTG+AGG - chr4_3:34530042-34530061 None:intergenic 65.0%
! GGCTCAACCAGCAGGAGTGC+CGG + chr4_3:34530274-34530293 Msa0638900:intron 65.0%
!! TCAACCAGCAGGAGTGCCGG+CGG + chr4_3:34530277-34530296 Msa0638900:intron 65.0%
GTCTGCTCGCTCCGGCTAGA+CGG - chr4_3:34530310-34530329 None:intergenic 65.0%
AGCCGGAGCGAGCAGACGAT+CGG + chr4_3:34530313-34530332 Msa0638900:intron 65.0%
TCCCGATCGTCTGCTCGCTC+CGG - chr4_3:34530318-34530337 None:intergenic 65.0%
CAGACGATCGGGACAGTCGC+CGG + chr4_3:34530325-34530344 Msa0638900:intron 65.0%
TGTGGGCACCTCTTCCAGCC+GGG + chr4_3:34532528-34532547 Msa0638900:intron 65.0%
GCCGGAGTGAGCAGACCACG+GGG + chr4_3:34524929-34524948 Msa0638900:CDS 70.0%
GCCGGAGCGAGCAGACGATC+GGG + chr4_3:34530314-34530333 Msa0638900:intron 70.0%
CAGACCACGGGGACAGCCGC+CGG + chr4_3:34524940-34524959 Msa0638900:CDS 75.0%
ATCACCGGCGGCTGTCCCCG+TGG - chr4_3:34524947-34524966 None:intergenic 75.0%
!! ACCAGCAGGAGTGCCGGCGG+CGG + chr4_3:34530280-34530299 Msa0638900:intron 75.0%
GCTAGACGGCAACCCGCCGC+CGG - chr4_3:34530296-34530315 None:intergenic 75.0%
!! GCGGCGGGTTGCCGTCTAGC+CGG + chr4_3:34530296-34530315 Msa0638900:intron 75.0%
!!! CCAGCAGGAGTGCCGGCGGC+GGG + chr4_3:34530281-34530300 Msa0638900:intron 80.0%
! CCCGCCGCCGGCACTCCTGC+TGG - chr4_3:34530284-34530303 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 34524505 34534110 34524505 ID=Msa0638900;Name=Msa0638900
chr4_3 mRNA 34524505 34534110 34524505 ID=Msa0638900-mRNA-1;Parent=Msa0638900;Name=Msa0638900-mRNA-1;_AED=0.27;_eAED=0.28;_QI=306|0.77|0.8|1|0.88|0.8|10|907|343
chr4_3 exon 34524505 34525034 34524505 ID=Msa0638900-mRNA-1:exon:7987;Parent=Msa0638900-mRNA-1
chr4_3 exon 34525811 34525884 34525811 ID=Msa0638900-mRNA-1:exon:7988;Parent=Msa0638900-mRNA-1
chr4_3 exon 34526374 34526384 34526374 ID=Msa0638900-mRNA-1:exon:7989;Parent=Msa0638900-mRNA-1
chr4_3 exon 34526884 34526946 34526884 ID=Msa0638900-mRNA-1:exon:7990;Parent=Msa0638900-mRNA-1
chr4_3 exon 34527053 34527199 34527053 ID=Msa0638900-mRNA-1:exon:7991;Parent=Msa0638900-mRNA-1
chr4_3 exon 34527300 34527368 34527300 ID=Msa0638900-mRNA-1:exon:7992;Parent=Msa0638900-mRNA-1
chr4_3 exon 34527489 34527623 34527489 ID=Msa0638900-mRNA-1:exon:7993;Parent=Msa0638900-mRNA-1
chr4_3 exon 34528127 34528197 34528127 ID=Msa0638900-mRNA-1:exon:7994;Parent=Msa0638900-mRNA-1
chr4_3 exon 34528470 34529154 34528470 ID=Msa0638900-mRNA-1:exon:7995;Parent=Msa0638900-mRNA-1
chr4_3 exon 34533651 34534110 34533651 ID=Msa0638900-mRNA-1:exon:7996;Parent=Msa0638900-mRNA-1
chr4_3 five_prime_UTR 34524505 34524810 34524505 ID=Msa0638900-mRNA-1:five_prime_utr;Parent=Msa0638900-mRNA-1
chr4_3 CDS 34524811 34525034 34524811 ID=Msa0638900-mRNA-1:cds;Parent=Msa0638900-mRNA-1
chr4_3 CDS 34525811 34525884 34525811 ID=Msa0638900-mRNA-1:cds;Parent=Msa0638900-mRNA-1
chr4_3 CDS 34526374 34526384 34526374 ID=Msa0638900-mRNA-1:cds;Parent=Msa0638900-mRNA-1
chr4_3 CDS 34526884 34526946 34526884 ID=Msa0638900-mRNA-1:cds;Parent=Msa0638900-mRNA-1
chr4_3 CDS 34527053 34527199 34527053 ID=Msa0638900-mRNA-1:cds;Parent=Msa0638900-mRNA-1
chr4_3 CDS 34527300 34527368 34527300 ID=Msa0638900-mRNA-1:cds;Parent=Msa0638900-mRNA-1
chr4_3 CDS 34527489 34527623 34527489 ID=Msa0638900-mRNA-1:cds;Parent=Msa0638900-mRNA-1
chr4_3 CDS 34528127 34528197 34528127 ID=Msa0638900-mRNA-1:cds;Parent=Msa0638900-mRNA-1
chr4_3 CDS 34528470 34528707 34528470 ID=Msa0638900-mRNA-1:cds;Parent=Msa0638900-mRNA-1
chr4_3 three_prime_UTR 34528708 34529154 34528708 ID=Msa0638900-mRNA-1:three_prime_utr;Parent=Msa0638900-mRNA-1
chr4_3 three_prime_UTR 34533651 34534110 34533651 ID=Msa0638900-mRNA-1:three_prime_utr;Parent=Msa0638900-mRNA-1
Gene Sequence

>Msa0638900

ATGGGAACGCAGCCGCATCAATCGTCCGTGGACGAAGAGGACGAGGAATTGATGGGTTGTGGAACTACGCTTTCCGGCCAATCAGGCTCAACGAGCAGGAGTGCCGGGTTACCGTCTAGCCGGAGTGAGCAGACCACGGGGACAGCCGCCGGTGATAACGCTGCTCTCAAATTGAATCATCTTGATATACATGATGACGATGCTGCTTCCCAGGCAGTAGTTGCTACCAAGAAGAAAAAGCGACGGGCTGTTGGGGGTGATAAGAATGGAAGAGGGCTCCGGCAATTTAGTATGAAAGTGTGTGAGAAGGTGGCAGATGAACTTGTGGCTGAATTTTCTGATCCAAGCAATGGTGGTTTGTCCCCTGATCAGCAACAATATGATGAGAAAAACATCCGTCGAAGGGTCTATGATGCTCTGAATGTTCTTATGGCTATGAATATTATTTCCAAGGATAAAAAAGAAATACAATGGAAGGGTCTTCCTCGTACCAGTCTGAGTGATATTGAAGAACTAAAGACACAGCGTCTTGGGCTTAGGAGTAGAATTGAAAGGAAAGCAGCCTATCTGCAGGAGCTTGAGCAGCAATTTCTGTTTGCTAACTGCTTTTATTATTGCTACAAGTTTGTAGGTCTTCAGAACCTTATTCAACGAAATGAACAATTATATAGCTCAGGAAATCCTCCCAGTGGAGGTGTATCTTTACCTTTTATTCTGGTTCAGACACGTCCTCATGCAACTGTGGAAGTGGAAATATCAGAAGACATGCAGCTTGTTCATTTTGATTTCAATAGTTCTCCTTTCGAGCTGCATGACGACAATTATGTTCTCAAGGCAATGGATTTTGGTGGGGGTGAGAGACCACAGAGTGACAATGTTACACACAATATTGCGGATGGAGGGGAAGGTTCTAGCATGTCAGGCATGTATCAATCACAGGTTCCTCAGTCAGTTTCAAACATGTTAGTTAGGCCTCCGACATCACCTCCACTCCCTGGAATATTAAAGGCAAGAGTTAAGCAAGAGAATTGA
Protein sequence

>Msa0638900

MGTQPHQSSVDEEDEELMGCGTTLSGQSGSTSRSAGLPSSRSEQTTGTAAGDNAALKLNHLDIHDDDAASQAVVATKKKKRRAVGGDKNGRGLRQFSMKVCEKVADELVAEFSDPSNGGLSPDQQQYDEKNIRRRVYDALNVLMAMNIISKDKKEIQWKGLPRTSLSDIEELKTQRLGLRSRIERKAAYLQELEQQFLFANCFYYCYKFVGLQNLIQRNEQLYSSGNPPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSSPFELHDDNYVLKAMDFGGGERPQSDNVTHNIADGGEGSSMSGMYQSQVPQSVSNMLVRPPTSPPLPGILKARVKQEN*