AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0652520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0652520 MtrunA17_Chr4g0046231 81.953 338 48 2 62 399 1 325 0.0 525
Msa0652520 MtrunA17_Chr4g0046231 60.121 331 68 7 434 700 1 331 6.32e-102 315
Msa0652520 MtrunA17_Chr7g0223471 58.128 406 148 6 8 399 7 404 5.39e-148 436
Msa0652520 MtrunA17_Chr7g0223471 48.698 384 111 8 394 695 26 405 4.57e-99 310
Msa0652520 MtrunA17_Chr4g0046241 76.786 168 39 0 166 333 2 169 2.80e-82 258
Msa0652520 MtrunA17_Chr4g0046241 73.134 134 10 3 521 628 2 135 1.79e-51 176
Msa0652520 MtrunA17_Chr2g0283141 36.028 433 202 15 8 399 7 405 2.31e-54 193
Msa0652520 MtrunA17_Chr2g0283141 35.500 400 156 12 383 695 22 406 1.91e-48 177
Msa0652520 MtrunA17_Chr4g0046251 89.189 74 8 0 627 700 17 90 1.99e-42 148
Msa0652520 MtrunA17_Chr4g0046251 59.420 69 28 0 331 399 16 84 9.90e-23 92.8
Msa0652520 MtrunA17_Chr6g0460691 63.333 60 22 0 35 94 24 83 2.50e-20 92.4
Msa0652520 MtrunA17_Chr6g0460691 60.000 60 24 0 407 466 24 83 5.49e-19 88.2
Msa0652520 MtrunA17_Chr7g0254251 62.069 58 22 0 35 92 20 77 5.49e-18 84.7
Msa0652520 MtrunA17_Chr7g0254251 60.345 58 23 0 407 464 20 77 5.48e-17 81.6
Msa0652520 MtrunA17_Chr7g0254251 42.857 70 39 1 627 695 197 266 9.49e-11 63.2
Msa0652520 MtrunA17_Chr4g0043891 46.269 67 36 0 37 103 2 68 1.08e-15 77.4
Msa0652520 MtrunA17_Chr4g0043891 44.262 61 34 0 410 470 3 63 2.77e-12 67.4
Msa0652520 MtrunA17_Chr5g0436661 37.778 90 50 1 14 103 10 93 2.47e-15 74.7
Msa0652520 MtrunA17_Chr5g0436661 33.333 114 56 3 415 508 33 146 2.92e-11 63.2
Msa0652520 MtrunA17_Chr8g0392991 49.180 61 31 0 43 103 96 156 4.53e-15 77.4
Msa0652520 MtrunA17_Chr8g0392991 40.000 80 42 2 415 492 96 171 1.25e-11 67.0
Msa0652520 MtrunA17_Chr4g0031341 30.508 177 91 3 43 189 25 199 9.31e-15 75.1
Msa0652520 MtrunA17_Chr5g0405351 41.975 81 45 2 43 122 30 109 9.93e-14 72.8
Msa0652520 MtrunA17_Chr5g0405351 29.787 141 68 3 415 524 30 170 9.56e-11 63.5
Msa0652520 MtrunA17_Chr1g0153171 40.449 89 43 1 15 103 72 150 3.01e-13 70.1
Msa0652520 MtrunA17_Chr3g0144021 33.010 103 62 1 41 143 80 175 8.38e-13 68.2
Msa0652520 MtrunA17_Chr7g0238431 43.333 60 34 0 43 102 8 67 4.65e-12 65.9
Msa0652520 MtrunA17_Chr1g0212511 41.270 63 37 0 40 102 82 144 1.95e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0652520 AT5G45980.1 33.108 296 174 5 407 695 47 325 1.04e-34 135
Msa0652520 AT5G45980.1 47.244 127 51 2 9 119 8 134 2.51e-29 119
Msa0652520 AT2G33880.1 63.889 72 26 0 400 471 40 111 2.06e-26 112
Msa0652520 AT2G33880.1 45.205 73 36 1 327 399 309 377 1.67e-12 70.1
Msa0652520 AT2G33880.1 48.333 60 31 0 636 695 319 378 2.46e-12 69.7
Msa0652520 AT2G33880.2 63.014 73 27 0 400 472 40 112 2.65e-26 112
Msa0652520 AT2G33880.2 44.000 75 38 1 327 401 309 379 1.50e-12 70.5
Msa0652520 AT2G33880.2 49.180 61 31 0 636 696 319 379 2.12e-12 70.1
Msa0652520 AT3G03660.1 47.872 94 39 2 1 94 1 84 1.38e-19 89.7
Msa0652520 AT3G03660.1 61.111 54 21 0 413 466 31 84 3.81e-17 82.4
Msa0652520 AT3G03660.2 47.872 94 39 2 1 94 1 84 2.27e-19 89.7
Msa0652520 AT3G03660.2 61.111 54 21 0 413 466 31 84 6.33e-17 82.4
Msa0652520 AT3G03660.4 47.872 94 39 2 1 94 1 84 3.72e-19 89.0
Msa0652520 AT3G03660.4 61.111 54 21 0 413 466 31 84 8.69e-17 82.0
Msa0652520 AT5G17810.3 66.667 54 18 0 41 94 19 72 4.70e-19 88.2
Msa0652520 AT5G17810.3 62.963 54 20 0 413 466 19 72 1.69e-17 83.6
Msa0652520 AT5G17810.1 66.667 54 18 0 41 94 19 72 5.06e-19 88.2
Msa0652520 AT5G17810.1 62.963 54 20 0 413 466 19 72 1.76e-17 83.6
Msa0652520 AT5G17810.2 66.667 54 18 0 41 94 19 72 5.06e-19 88.2
Msa0652520 AT5G17810.2 62.963 54 20 0 413 466 19 72 1.76e-17 83.6
Msa0652520 AT3G03660.3 47.872 94 39 2 1 94 1 84 5.53e-19 89.4
Msa0652520 AT3G03660.3 61.111 54 21 0 413 466 31 84 1.40e-16 82.0
Msa0652520 AT3G18010.1 47.541 61 32 0 43 103 76 136 1.46e-14 76.3
Msa0652520 AT3G18010.1 44.643 56 31 0 415 470 76 131 9.04e-11 64.7
Msa0652520 AT1G46480.2 47.826 69 35 1 35 103 83 150 7.44e-14 71.2
Msa0652520 AT5G59340.1 26.667 180 122 4 43 216 14 189 8.92e-14 72.4
Msa0652520 AT5G05770.1 43.333 60 34 0 43 102 29 88 1.15e-13 68.6
Msa0652520 AT5G05770.1 36.000 75 41 1 415 482 29 103 6.52e-11 60.8
Msa0652520 AT3G11260.1 44.262 61 34 0 43 103 24 84 1.67e-13 70.1
Msa0652520 AT1G46480.1 47.826 69 35 1 35 103 83 150 3.42e-13 70.5
Msa0652520 AT2G17950.1 50.000 62 30 1 43 103 38 99 3.65e-13 71.2
Msa0652520 AT2G17950.1 41.250 80 45 2 415 492 38 117 1.03e-11 67.0
Msa0652520 AT2G01500.1 49.091 55 28 0 43 97 61 115 1.49e-12 68.9
Msa0652520 AT2G28610.1 42.424 66 38 0 37 102 2 67 5.92e-12 66.6
Msa0652520 AT4G35550.1 42.857 63 36 0 41 103 97 159 8.27e-12 66.6
Msa0652520 AT1G20700.2 41.270 63 37 0 41 103 31 93 1.59e-11 63.2
Msa0652520 AT1G20700.2 32.258 93 60 1 397 489 15 104 5.52e-11 61.6
Msa0652520 AT1G20700.1 36.486 74 47 0 30 103 82 155 1.93e-11 64.7
Msa0652520 AT1G20700.1 32.258 93 60 1 397 489 77 166 8.66e-11 62.8
Msa0652520 AT1G20700.3 36.486 74 47 0 30 103 82 155 2.13e-11 64.3

Find 191 sgRNAs with CRISPR-Local

Find 663 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGAACAATTAGAAGAATT+TGG 0.130042 4_3:+60248255 Msa0652520:CDS
CAAGACCCGCAATTTAATTT+TGG 0.177107 4_3:+60248891 Msa0652520:CDS
TTAGAAGAATTTGGGAAAAT+TGG 0.179693 4_3:+60248264 Msa0652520:CDS
CAAGACCCACAACTTAATTT+TGG 0.181827 4_3:+60257049 Msa0652520:CDS
TGTTTCCTGTTTCTTGTTAT+AGG 0.203606 4_3:-60256564 None:intergenic
CGTGGACAATTAGAAGAATT+TGG 0.217411 4_3:+60256470 Msa0652520:CDS
GGTAGGGATTGACTCATATT+TGG 0.224718 4_3:-60256896 None:intergenic
AAGAATTTACGAACGTTAAA+AGG 0.235477 4_3:-60257635 None:intergenic
TCATCTTCCTCTAACAATAT+TGG 0.243443 4_3:+60256653 Msa0652520:CDS
CCATTGAGAAAGAGGAAAAT+AGG 0.245649 4_3:-60248629 None:intergenic
GTTTCCTGTTTCTTGTTATA+GGG 0.246182 4_3:-60256563 None:intergenic
AATAAGTATCATCTTGCTTT+TGG 0.259990 4_3:-60248566 None:intergenic
AAAGGATTCACGAACGTTAA+AGG 0.277504 4_3:-60249286 None:intergenic
ATGCGGATTTGCTCAGGCTT+TGG 0.283372 4_3:-60248171 None:intergenic
ATGAACAATGAAAATGAAAA+TGG 0.285973 4_3:+60248792 Msa0652520:CDS
CCATGGGGCTGATTATTTCC+TGG 0.287811 4_3:+60257739 Msa0652520:CDS
GATAAGTACCACCTTGGTTT+TGG 0.292529 4_3:-60256736 None:intergenic
CACTCTCCCATCATTAATAT+TGG 0.292661 4_3:-60248511 None:intergenic
TTTAACGTTCGTAAATTCTT+TGG 0.298436 4_3:+60257638 Msa0652520:CDS
AGAGAGATTGCAGGTGAATT+AGG 0.299501 4_3:-60256710 None:intergenic
CACCGTCCCATCATTAATAT+TGG 0.306396 4_3:-60256681 None:intergenic
GCCTGAGCAAATCCGCATTC+TGG 0.308743 4_3:+60248176 Msa0652520:CDS
TGCGGATTTGCTCAGGCTTT+GGG 0.308960 4_3:-60248170 None:intergenic
TGCGGATTTGCTCAGGCTTT+GGG 0.317008 4_3:-60256385 None:intergenic
ATGCGGATTTGCTCAGGCTT+TGG 0.318582 4_3:-60256386 None:intergenic
TCAGGCTTTGGGATCCATCT+TGG 0.322557 4_3:-60256374 None:intergenic
TCAGGCTTTGGGTTCCATCT+TGG 0.322968 4_3:-60248159 None:intergenic
TTTCACTGGGAGAGGCTCTT+TGG 0.326910 4_3:-60248461 None:intergenic
GAAGTTGATCATCAGTAAAA+AGG 0.326950 4_3:-60249007 None:intergenic
TTTGGGTTCCATCTTGGCCT+TGG 0.327019 4_3:-60248153 None:intergenic
TTTGGGATCCATCTTGGCCT+TGG 0.327019 4_3:-60256368 None:intergenic
ATCACAATATCTAACAATAT+TGG 0.329123 4_3:+60248483 Msa0652520:CDS
GGAGAGATTGTGGATGAATT+AGG 0.338412 4_3:-60248540 None:intergenic
GGTGGTGGTGGTGGGATTTG+TGG 0.341213 4_3:-60248408 None:intergenic
GTGGTGGTGGTGGGATTTGT+GGG 0.343259 4_3:-60248407 None:intergenic
GGTGAGGGTTCAATCATATT+CGG 0.354951 4_3:-60248726 None:intergenic
CTCAAAGCCATCTATAACTC+AGG 0.355199 4_3:+60256410 Msa0652520:CDS
GGAGATTCCAATATTGTTAG+AGG 0.358018 4_3:-60256660 None:intergenic
ATTTGTGGGAGAGAGTTATT+AGG 0.358733 4_3:-60248393 None:intergenic
GTGAACAATTAGAAGAATTT+GGG 0.359582 4_3:+60248256 Msa0652520:CDS
TTCCATCTTGGCCTTGGTCC+AGG 0.361114 4_3:-60248147 None:intergenic
CTTGTTATAGGGTACTTTGT+TGG 0.367143 4_3:-60256552 None:intergenic
TGGTTGGAGTTCGACGAATT+TGG 0.370437 4_3:-60247541 None:intergenic
GATGGATTAGGTGGTGGTGG+TGG 0.376558 4_3:-60248417 None:intergenic
AGAGGCTCTTTGGTGATTAG+AGG 0.377467 4_3:-60248451 None:intergenic
TTTACTGATGATCAACTTCA+AGG 0.378920 4_3:+60249011 Msa0652520:CDS
AATTAAATTGCGGGTCTTGT+TGG 0.379122 4_3:-60248887 None:intergenic
CGTCATCCCTGAGTTATAGA+TGG 0.384216 4_3:-60256417 None:intergenic
CTGGAAGCAATCTACAACTC+AGG 0.386585 4_3:+60248195 Msa0652520:CDS
GAAGATGATGAAGATGGATT+AGG 0.391757 4_3:-60248429 None:intergenic
TGACACCAAAATTAAATTGC+GGG 0.395460 4_3:-60248896 None:intergenic
AGTGGTGGTGTGGTGATTTG+TGG 0.396224 4_3:-60256617 None:intergenic
TGGGATAGATAGAGAAAGTA+AGG 0.397116 4_3:-60247448 None:intergenic
CCCCATTCATCGGTTAGAAC+CGG 0.398111 4_3:-60249345 None:intergenic
CCCGGTTCTAACCGATGAAT+GGG 0.399463 4_3:+60249344 Msa0652520:CDS
GTTGTAGATCGGTTTCAGTT+GGG 0.400667 4_3:-60248596 None:intergenic
GATAATGAAGAAAGAAATCC+TGG 0.405944 4_3:+60248129 Msa0652520:CDS
CCCCACTCATCGGTTAGAAC+CGG 0.406777 4_3:-60257695 None:intergenic
CATTGAGAAAGAGGAAAATA+GGG 0.407191 4_3:-60248628 None:intergenic
AACATCATGACCTATGGAAA+TGG 0.408768 4_3:+60256950 Msa0652520:CDS
ATTTGTGGGAGAGAGCTATC+TGG 0.415068 4_3:-60256602 None:intergenic
GTGCATGTGCATCATATTCA+TGG 0.415898 4_3:-60248865 None:intergenic
CCCTCAACTCACTCCACCAT+GGG 0.416100 4_3:+60257723 Msa0652520:CDS
TTAGGAGCTGGATCTGCAAT+TGG 0.417412 4_3:-60248375 None:intergenic
ATCCATCTTGGCCTTGGTCC+AGG 0.421536 4_3:-60256362 None:intergenic
TCCAGAATGCGGATTTGCTC+AGG 0.421812 4_3:-60248177 None:intergenic
GTTAGATATTGTGATTTCAC+TGG 0.434652 4_3:-60248475 None:intergenic
GGAATCTCCAATATTAATGA+TGG 0.434654 4_3:+60256674 Msa0652520:CDS
TTTAACGTTCGTGAATCCTT+TGG 0.434959 4_3:+60249288 Msa0652520:CDS
ATGATTCTCCATTGAGAAAG+AGG 0.435482 4_3:-60248637 None:intergenic
GGAATCTCCAATATTAATGA+TGG 0.437319 4_3:+60248504 Msa0652520:CDS
AATTAAGTTGTGGGTCTTGT+TGG 0.440039 4_3:-60257045 None:intergenic
TTGAGAATGCGGATTTGCTC+AGG 0.441470 4_3:-60256392 None:intergenic
GTGAGGGTTCAATCATATTC+GGG 0.442014 4_3:-60248725 None:intergenic
AAGGATTCACGAACGTTAAA+GGG 0.443421 4_3:-60249285 None:intergenic
ATCTTCTTGATTTCATCTAC+AGG 0.443482 4_3:-60248231 None:intergenic
GTGGTGGTGTGGTGATTTGT+GGG 0.445822 4_3:-60256616 None:intergenic
CTGATCGATCGTTGATATGC+TGG 0.450919 4_3:-60247468 None:intergenic
CCCCGGTTCTAACCGATGAA+TGG 0.455370 4_3:+60249343 Msa0652520:CDS
CCTCACACCCTCACTGGAAC+CGG 0.457199 4_3:+60256758 Msa0652520:CDS
GATGATGAAGAAAGAACTCC+TGG 0.460723 4_3:+60256344 Msa0652520:CDS
AGTTGTAGATCGGTTTCAGT+TGG 0.468112 4_3:-60248597 None:intergenic
ACTTGACTCCTCCGGTGTCC+CGG 0.468788 4_3:+60257676 Msa0652520:CDS
CCCATTCATCGGTTAGAACC+GGG 0.470305 4_3:-60249344 None:intergenic
ATGGATTAGGTGGTGGTGGT+GGG 0.472541 4_3:-60248416 None:intergenic
AGTACCCTATAACAAGAAAC+AGG 0.472976 4_3:+60256559 Msa0652520:CDS
ATGTCAATGGCCGGAGGTAG+AGG 0.473475 4_3:-60248960 None:intergenic
GGTGACTTTATAAACTTGCT+TGG 0.474802 4_3:-60247520 None:intergenic
TATGATAACATCATGACCTA+TGG 0.476880 4_3:+60256944 Msa0652520:CDS
ATGGAGAATCATGTTAATGA+AGG 0.479722 4_3:+60248648 Msa0652520:CDS
CCCGGTTCTAACCGATGAGT+GGG 0.480119 4_3:+60257694 Msa0652520:CDS
TTAGAAGAATTTGGACCGAT+TGG 0.480912 4_3:+60256479 Msa0652520:CDS
ACTTATCCTCACACCCTCAC+TGG 0.497083 4_3:+60256752 Msa0652520:CDS
CTCCTGGACCAAGGCCAAGA+TGG 0.498721 4_3:+60256360 Msa0652520:CDS
TTGTAGATCGGTTTCAGTTG+GGG 0.501118 4_3:-60248595 None:intergenic
GAAGATGGATTAGGTGGTGG+TGG 0.501572 4_3:-60248420 None:intergenic
GTTCGTAAATTCTTTGGCGA+TGG 0.502140 4_3:+60257644 Msa0652520:CDS
TAGTGCTTAATGACATGATA+AGG 0.507658 4_3:+60256843 Msa0652520:intron
CCCCATGGTGGAGTGAGTTG+AGG 0.511520 4_3:-60257724 None:intergenic
TATTGTGATTTCACTGGGAG+AGG 0.511945 4_3:-60248469 None:intergenic
GGGAGAGAGTTATTAGGAGC+TGG 0.513692 4_3:-60248387 None:intergenic
ACGATGGTACAGCAAAATGT+AGG 0.522895 4_3:+60257573 Msa0652520:CDS
GGTACATTCAAAGTTAATGC+AGG 0.526348 4_3:+60257611 Msa0652520:CDS
ATCCTGGACCAAGGCCAAGA+TGG 0.528279 4_3:+60248145 Msa0652520:CDS
CCCATGGTGGAGTGAGTTGA+GGG 0.532190 4_3:-60257723 None:intergenic
TGAGCAGTTTCCATTTCCAT+AGG 0.532338 4_3:-60256960 None:intergenic
GAGAAGTAATTAAACCCCTC+TGG 0.532494 4_3:-60256866 None:intergenic
TGACACCAAAATTAAGTTGT+GGG 0.534770 4_3:-60257054 None:intergenic
GGTGCACTCATGTCAATGGC+CGG 0.541661 4_3:-60248969 None:intergenic
AGCAGGTGCACTCATGTCAA+TGG 0.543766 4_3:-60248973 None:intergenic
GTTAACCTCGATTACTTCGT+TGG 0.544175 4_3:-60249256 None:intergenic
TTGTAGACCGGTTCCAGTGA+GGG 0.546990 4_3:-60256765 None:intergenic
AAAAGGAATGGAATATCAGC+AGG 0.549420 4_3:-60248990 None:intergenic
TCCATGGTAGAGTGAGTTGA+GGG 0.553586 4_3:-60249373 None:intergenic
TTCTTGATTTCATCTACAGG+TGG 0.556034 4_3:-60248228 None:intergenic
GAGGGTGACACCCCATTCAT+CGG 0.558082 4_3:-60249355 None:intergenic
TGGAGAATCATGTTAATGAA+GGG 0.558945 4_3:+60248649 Msa0652520:CDS
TGATCAAGTGAATGTTCAAG+AGG 0.560823 4_3:+60248839 Msa0652520:CDS
GTTTGACTCCTTCTGTACCC+CGG 0.561060 4_3:+60249326 Msa0652520:CDS
TCCCGGTTCTAACCGATGAG+TGG 0.562878 4_3:+60257693 Msa0652520:CDS
TTAGAGGAAGATGATGAAGA+TGG 0.564984 4_3:-60248435 None:intergenic
CTCCAATATTAATGATGGGA+CGG 0.566336 4_3:+60256679 Msa0652520:CDS
AACCATCAAAATCGTCTGCA+TGG 0.567329 4_3:+60247559 Msa0652520:CDS
CCCACTCATCGGTTAGAACC+GGG 0.569151 4_3:-60257694 None:intergenic
TATAGATGGCTTTGAGAATG+CGG 0.572647 4_3:-60256403 None:intergenic
ATCGGTTAGAACCGGGACAC+CGG 0.573165 4_3:-60257687 None:intergenic
ACCCTCAACTCACTCCACCA+TGG 0.573606 4_3:+60257722 Msa0652520:CDS
GAATCTCCAATATTAATGAT+GGG 0.575519 4_3:+60248505 Msa0652520:CDS
GAATCTCCAATATTAATGAT+GGG 0.575519 4_3:+60256675 Msa0652520:CDS
CGATGGTACAGCAAAATGTA+GGG 0.576909 4_3:+60257574 Msa0652520:CDS
GCAGTTCTACTTGACTCCTC+CGG 0.578536 4_3:+60257668 Msa0652520:CDS
GGTTAGAACCGGGGTACAGA+AGG 0.581477 4_3:-60249334 None:intergenic
TTAGATATTGTGATTTCACT+GGG 0.581998 4_3:-60248474 None:intergenic
TTGAAACCAATAAAAGACGC+TGG 0.582551 4_3:-60256507 None:intergenic
CTCCATGGTAGAGTGAGTTG+AGG 0.583077 4_3:-60249374 None:intergenic
TGATCTTGCTCCTCTACCTC+CGG 0.584790 4_3:+60248950 Msa0652520:CDS
CCGGTTCCAGTGAGGGTGTG+AGG 0.585988 4_3:-60256758 None:intergenic
GTGACACCAAAATTAAATTG+CGG 0.589142 4_3:-60248897 None:intergenic
TGGAAGCAATCTACAACTCA+GGG 0.590445 4_3:+60248196 Msa0652520:CDS
ATGTTATCATAATTAAGCAC+AGG 0.594226 4_3:-60248768 None:intergenic
GAGGGTGACACCCCACTCAT+CGG 0.597239 4_3:-60257705 None:intergenic
TTTCAAAACCGCAAGTCCAA+AGG 0.599228 4_3:+60248309 Msa0652520:CDS
AAGACGCTGGAATCACCAAT+CGG 0.600408 4_3:-60256494 None:intergenic
CCACGTAATAATCAGCTCCA+TGG 0.601206 4_3:-60249389 None:intergenic
TTATCAAGAGAATATTCAAG+AGG 0.601533 4_3:+60256997 Msa0652520:CDS
TGTAGATTGCTTCCAGAATG+CGG 0.605667 4_3:-60248188 None:intergenic
GAAGTAATCGAGGTTAACGC+AGG 0.607642 4_3:+60249261 Msa0652520:CDS
TACTGCCAACGAAGTAATCG+AGG 0.608047 4_3:+60249251 Msa0652520:CDS
TCAAAGCCATCTATAACTCA+GGG 0.608140 4_3:+60256411 Msa0652520:CDS
GTGACACCAAAATTAAGTTG+TGG 0.611199 4_3:-60257055 None:intergenic
GGAGAATCATGTTAATGAAG+GGG 0.615858 4_3:+60248650 Msa0652520:CDS
CAGAACTGCTCTATTACCAA+AGG 0.619722 4_3:-60249304 None:intergenic
TGATCGATCGTTGATATGCT+GGG 0.620933 4_3:-60247467 None:intergenic
TGTAGGGTGATTACTATCAA+CGG 0.630138 4_3:+60257590 Msa0652520:CDS
GGGATAGATAGAGAAAGTAA+GGG 0.630834 4_3:-60247447 None:intergenic
AATGACATGACAACACTAGA+GGG 0.631034 4_3:+60248681 Msa0652520:CDS
TGTGAGGATAAGTACCACCT+TGG 0.631687 4_3:-60256742 None:intergenic
TATCAACGATCGATCAGCAA+TGG 0.633740 4_3:+60247474 Msa0652520:exon
GGAAATAATCAGCCCCATGG+TGG 0.634153 4_3:-60257736 None:intergenic
GTACATTCAAAGTTAATGCA+GGG 0.634787 4_3:+60257612 Msa0652520:CDS
GTTGTAGACCGGTTCCAGTG+AGG 0.637143 4_3:-60256766 None:intergenic
ATCTCTCTGAGCCAAAACCA+AGG 0.639915 4_3:+60256725 Msa0652520:CDS
TATTAATGATGGGACGGTGA+TGG 0.642433 4_3:+60256685 Msa0652520:CDS
GATGATGAAGATGGATTAGG+TGG 0.643509 4_3:-60248426 None:intergenic
AAGAAAGAACTCCTGGACCA+AGG 0.644218 4_3:+60256351 Msa0652520:CDS
ACCCTCAACTCACTCTACCA+TGG 0.647606 4_3:+60249372 Msa0652520:CDS
TAATGACATGACAACACTAG+AGG 0.647700 4_3:+60248680 Msa0652520:CDS
GATGAAGATGGATTAGGTGG+TGG 0.649565 4_3:-60248423 None:intergenic
CTCGTAAGAAGAAAGTACAT+TGG 0.652355 4_3:+60247497 Msa0652520:CDS
CTCCCTCGAAGAAAGTACAT+TGG 0.654219 4_3:+60255682 Msa0652520:intron
AGATGAGTTGAGTGGTGGTG+TGG 0.655150 4_3:-60256627 None:intergenic
CCAGGAAATAATCAGCCCCA+TGG 0.655999 4_3:-60257739 None:intergenic
AAGAAAGAAATCCTGGACCA+AGG 0.658709 4_3:+60248136 Msa0652520:CDS
TAATGACATGATAAGGCCAG+AGG 0.662717 4_3:+60256850 Msa0652520:CDS
GGTTAGAACCGGGACACCGG+AGG 0.663701 4_3:-60257684 None:intergenic
CCATGGAGCTGATTATTACG+TGG 0.665604 4_3:+60249389 Msa0652520:CDS
AAGTAATCGAGGTTAACGCA+GGG 0.673390 4_3:+60249262 Msa0652520:CDS
ATGACATGACAACACTAGAG+GGG 0.676653 4_3:+60248682 Msa0652520:CDS
TATTAATGATGGGAGAGTGT+TGG 0.676983 4_3:+60248515 Msa0652520:CDS
TTCTTAATCTCATCTCTACG+TGG 0.679677 4_3:-60256443 None:intergenic
AATGACATGATAAGGCCAGA+GGG 0.681201 4_3:+60256851 Msa0652520:CDS
CCGGTTCTAACCGATGAATG+GGG 0.682846 4_3:+60249345 Msa0652520:CDS
CCGGTTCTAACCGATGAGTG+GGG 0.684812 4_3:+60257695 Msa0652520:CDS
CCATTCATCGGTTAGAACCG+GGG 0.687831 4_3:-60249343 None:intergenic
GCACTCATGTCAATGGCCGG+AGG 0.689498 4_3:-60248966 None:intergenic
ATGACATGATAAGGCCAGAG+GGG 0.698753 4_3:+60256852 Msa0652520:CDS
GATGATGAAGATGAGTTGAG+TGG 0.699555 4_3:-60256635 None:intergenic
CCTCAACTCACTCCACCATG+GGG 0.702965 4_3:+60257724 Msa0652520:CDS
GATGAGATTAAGAAGATACG+TGG 0.711435 4_3:+60256452 Msa0652520:CDS
GATGAAGATGAGTTGAGTGG+TGG 0.726884 4_3:-60256632 None:intergenic
TCTCTGAGCCAAAACCAAGG+TGG 0.727096 4_3:+60256728 Msa0652520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATAATAATAAAATAA+TGG + chr4_3:60249843-60249862 Msa0652520:intron 0.0%
!! TAATAATAATAAAAAGTAGA+AGG - chr4_3:60247622-60247641 None:intergenic 10.0%
!!! TTTCTAAAACTATTTTTTAT+GGG - chr4_3:60248001-60248020 None:intergenic 10.0%
!!! ATTTCTAAAACTATTTTTTA+TGG - chr4_3:60248002-60248021 None:intergenic 10.0%
!!! CTTTTTACTAAAAAAATTAA+AGG - chr4_3:60249817-60249836 None:intergenic 10.0%
!! AAAAATTTACTAAAAAAAAG+AGG + chr4_3:60249917-60249936 Msa0652520:intron 10.0%
!!! TTATTTTTCATATATAACTA+TGG + chr4_3:60250070-60250089 Msa0652520:intron 10.0%
!!! CTAAATAAAATATTCAATTT+TGG - chr4_3:60252080-60252099 None:intergenic 10.0%
!!! TTAAAATTAGGAAAATTTTA+TGG - chr4_3:60252668-60252687 None:intergenic 10.0%
!! CAAAAAAAAAAAAAAACATA+GGG - chr4_3:60253466-60253485 None:intergenic 10.0%
!! TCAAAAAAAAAAAAAAACAT+AGG - chr4_3:60253467-60253486 None:intergenic 10.0%
!!! TCAAGATATTTTTTTTTTTA+AGG + chr4_3:60253851-60253870 Msa0652520:intron 10.0%
!!! GATAATTTTATAAACAAAAA+AGG - chr4_3:60255349-60255368 None:intergenic 10.0%
!!! TTCTATAACTAATTTTTTAT+GGG - chr4_3:60256207-60256226 None:intergenic 10.0%
!!! TTTCTATAACTAATTTTTTA+TGG - chr4_3:60256208-60256227 None:intergenic 10.0%
!!! ATTTTTTTAAAGCTAAGATT+AGG - chr4_3:60247855-60247874 None:intergenic 15.0%
!! AATTACAAATATAGATGATT+TGG + chr4_3:60249532-60249551 Msa0652520:intron 15.0%
!! TATATAACTATGGATTTAAT+TGG + chr4_3:60250080-60250099 Msa0652520:intron 15.0%
!!! TTATTTTGAAAATTACGTAT+AGG + chr4_3:60250164-60250183 Msa0652520:intron 15.0%
!! TCCATATTACTATATTTATA+GGG + chr4_3:60251010-60251029 Msa0652520:intron 15.0%
!!! TTTTGAATACGATAATTTAA+AGG + chr4_3:60252232-60252251 Msa0652520:intron 15.0%
!! TTTGAATACGATAATTTAAA+GGG + chr4_3:60252233-60252252 Msa0652520:intron 15.0%
!!! CAATCAAAGTATTTAAAATT+AGG - chr4_3:60252680-60252699 None:intergenic 15.0%
!! TATGAAATTCTATAAGAAAT+TGG - chr4_3:60252962-60252981 None:intergenic 15.0%
!! ATTTCTTATAGAATTTCATA+AGG + chr4_3:60252962-60252981 Msa0652520:intron 15.0%
!! AAATTAGAACTATTTAAACT+TGG + chr4_3:60253382-60253401 Msa0652520:intron 15.0%
!! AATTAGAACTATTTAAACTT+GGG + chr4_3:60253383-60253402 Msa0652520:intron 15.0%
!!! AAACAAATTATATATCGATT+TGG + chr4_3:60255904-60255923 Msa0652520:intron 15.0%
!!! AACAAATCTTTTTTATTGAA+TGG + chr4_3:60255967-60255986 Msa0652520:intron 15.0%
!! ATTATGATTTATATATCTCA+TGG + chr4_3:60257451-60257470 Msa0652520:intron 15.0%
!!! TTTAGTTTTTTTTCCATGTT+AGG + chr4_3:60247776-60247795 Msa0652520:intron 20.0%
!!! TTAGTTTTTTTTCCATGTTA+GGG + chr4_3:60247777-60247796 Msa0652520:intron 20.0%
!!! AAGATCAAATAGTAGATTTT+AGG - chr4_3:60247885-60247904 None:intergenic 20.0%
!! GCTTATAACAAATATTGTTT+AGG + chr4_3:60248102-60248121 Msa0652520:intron 20.0%
!! TATAACAAATATTGTTTAGG+TGG + chr4_3:60248105-60248124 Msa0652520:intron 20.0%
!! ATCACAATATCTAACAATAT+TGG + chr4_3:60248483-60248502 Msa0652520:CDS 20.0%
!! ATGAACAATGAAAATGAAAA+TGG + chr4_3:60248792-60248811 Msa0652520:CDS 20.0%
!! TTTATAAGGGAAAATGATTT+GGG - chr4_3:60249655-60249674 None:intergenic 20.0%
!!! TTTTATAAGGGAAAATGATT+TGG - chr4_3:60249656-60249675 None:intergenic 20.0%
!!! GGGAACTTTTTTTTTTATAA+GGG - chr4_3:60249668-60249687 None:intergenic 20.0%
!!! TGGGAACTTTTTTTTTTATA+AGG - chr4_3:60249669-60249688 None:intergenic 20.0%
!! TTACCTAATCAAAATGATTT+GGG - chr4_3:60249688-60249707 None:intergenic 20.0%
!! ATTACCTAATCAAAATGATT+TGG - chr4_3:60249689-60249708 None:intergenic 20.0%
!! TTTGATTAGGTAATGATATT+TGG + chr4_3:60249695-60249714 Msa0652520:intron 20.0%
!!! AATTAGTGTTGAAGAATTAA+TGG - chr4_3:60249724-60249743 None:intergenic 20.0%
!! ATTTAATTGGTATACCTTAT+GGG + chr4_3:60250093-60250112 Msa0652520:intron 20.0%
!! AAAAAATATTTACACCCATA+AGG - chr4_3:60250110-60250129 None:intergenic 20.0%
!! CAAACATTTCATCAAATATA+TGG - chr4_3:60250462-60250481 None:intergenic 20.0%
!!! TCATAATTTTTCTTTCTTTC+CGG - chr4_3:60250625-60250644 None:intergenic 20.0%
!! ATTTATGTAATTAATGATCG+TGG + chr4_3:60250647-60250666 Msa0652520:intron 20.0%
!! AAACTAAATTCTTTCACATA+TGG - chr4_3:60250698-60250717 None:intergenic 20.0%
!!! CTTATTTTATTGTCAAAATG+AGG + chr4_3:60250876-60250895 Msa0652520:intron 20.0%
!! CTCCATATTACTATATTTAT+AGG + chr4_3:60251009-60251028 Msa0652520:intron 20.0%
!! ACCCTATAAATATAGTAATA+TGG - chr4_3:60251014-60251033 None:intergenic 20.0%
!! TATAATTCTCATTCACTATA+CGG - chr4_3:60251319-60251338 None:intergenic 20.0%
!!! TTGATTAAAAGAGTACTAAA+AGG - chr4_3:60251407-60251426 None:intergenic 20.0%
!! TATTTGATCTTATGATGATT+TGG - chr4_3:60251561-60251580 None:intergenic 20.0%
!! AGATCAAATAGATCTTATAT+AGG + chr4_3:60251571-60251590 Msa0652520:intron 20.0%
!! ATTAAATCAAACATCTTGAA+GGG - chr4_3:60251657-60251676 None:intergenic 20.0%
!! AATTAAATCAAACATCTTGA+AGG - chr4_3:60251658-60251677 None:intergenic 20.0%
!! AGAAATGTAAAAAATGCAAA+GGG - chr4_3:60251710-60251729 None:intergenic 20.0%
!! AAGAAATGTAAAAAATGCAA+AGG - chr4_3:60251711-60251730 None:intergenic 20.0%
!! TTTAATACACATACAAACAA+AGG - chr4_3:60251793-60251812 None:intergenic 20.0%
!! ACAAGTTAGTAGTATTAATT+AGG + chr4_3:60251834-60251853 Msa0652520:intron 20.0%
!! CAAGTTAGTAGTATTAATTA+GGG + chr4_3:60251835-60251854 Msa0652520:intron 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG + chr4_3:60251836-60251855 Msa0652520:intron 20.0%
!!! TATTCAAAATTTGCTAACTT+TGG - chr4_3:60252221-60252240 None:intergenic 20.0%
!!! TACAAGTACTATTTTATTGT+CGG + chr4_3:60252396-60252415 Msa0652520:intron 20.0%
!! CAAAAATTGAGTAATTTCAT+AGG + chr4_3:60252903-60252922 Msa0652520:intron 20.0%
!!! ATTGGAACTATATTTTTTCA+TGG - chr4_3:60252944-60252963 None:intergenic 20.0%
!! CCAATAAAAAGAATGAATAT+TGG - chr4_3:60253320-60253339 None:intergenic 20.0%
!!! CCAATATTCATTCTTTTTAT+TGG + chr4_3:60253317-60253336 Msa0652520:intron 20.0%
!! CGTGTAAAATAAAAAACATA+GGG - chr4_3:60253498-60253517 None:intergenic 20.0%
!! TCGTGTAAAATAAAAAACAT+AGG - chr4_3:60253499-60253518 None:intergenic 20.0%
!! TAGCATTTACTGTTATTAAT+TGG - chr4_3:60253571-60253590 None:intergenic 20.0%
!! AAATCAAATTCAATATCTTG+AGG - chr4_3:60253724-60253743 None:intergenic 20.0%
!! AATAAGAGTTTCAATAAAAC+TGG + chr4_3:60253900-60253919 Msa0652520:intron 20.0%
!! ATAAGAGTTTCAATAAAACT+GGG + chr4_3:60253901-60253920 Msa0652520:intron 20.0%
!! ACTTCTAAATATCTTGATAA+AGG - chr4_3:60254792-60254811 None:intergenic 20.0%
!!! TAGAAGTTTTGTTTTACTAA+AGG + chr4_3:60254805-60254824 Msa0652520:intron 20.0%
!! TACTCAAATTGTATTATTCA+GGG - chr4_3:60254995-60255014 None:intergenic 20.0%
!! TTACTCAAATTGTATTATTC+AGG - chr4_3:60254996-60255015 None:intergenic 20.0%
!! AATGTAAAGTTCTTTCTTTA+GGG - chr4_3:60255058-60255077 None:intergenic 20.0%
!! AAATGTAAAGTTCTTTCTTT+AGG - chr4_3:60255059-60255078 None:intergenic 20.0%
!! AAAGTAGAAACAAACAAAAA+CGG - chr4_3:60255287-60255306 None:intergenic 20.0%
!!! GATATATAATTTGTTTCGAT+TGG - chr4_3:60255900-60255919 None:intergenic 20.0%
!!! TAGTAAAGATCAAATTTGTT+TGG - chr4_3:60255997-60256016 None:intergenic 20.0%
!!! AATAGTTGATGTTTAGATTT+AGG - chr4_3:60256084-60256103 None:intergenic 20.0%
!! TTGAGAATCATATTAATGAA+AGG + chr4_3:60256819-60256838 Msa0652520:intron 20.0%
!! TGAGAATCATATTAATGAAA+GGG + chr4_3:60256820-60256839 Msa0652520:intron 20.0%
!! GAATATTCTCTTGATAAAAA+AGG - chr4_3:60256994-60257013 None:intergenic 20.0%
!! TTCAAATATTCATCCTTAAT+TGG - chr4_3:60257245-60257264 None:intergenic 20.0%
!! ATATAAATCATAATCATACC+CGG - chr4_3:60257445-60257464 None:intergenic 20.0%
!!! TCGATATAATTTGTTTCGAT+TGG - chr4_3:60247756-60247775 None:intergenic 25.0%
!!! TAGTTTTTTTTCCATGTTAG+GGG + chr4_3:60247778-60247797 Msa0652520:intron 25.0%
!! TACTATTTGATCTTTTCCAA+TGG + chr4_3:60247891-60247910 Msa0652520:intron 25.0%
! GTGAACAATTAGAAGAATTT+GGG + chr4_3:60248256-60248275 Msa0652520:CDS 25.0%
! TTAGAAGAATTTGGGAAAAT+TGG + chr4_3:60248264-60248283 Msa0652520:CDS 25.0%
! TTAGATATTGTGATTTCACT+GGG - chr4_3:60248477-60248496 None:intergenic 25.0%
! GAATCTCCAATATTAATGAT+GGG + chr4_3:60248505-60248524 Msa0652520:CDS 25.0%
!! AATAAGTATCATCTTGCTTT+TGG - chr4_3:60248569-60248588 None:intergenic 25.0%
! ATGTTATCATAATTAAGCAC+AGG - chr4_3:60248771-60248790 None:intergenic 25.0%
!! TATAACGATTAGTTGATGTT+TGG + chr4_3:60249181-60249200 Msa0652520:intron 25.0%
!! TAATTTGTACGTGTCTAATA+TGG + chr4_3:60249765-60249784 Msa0652520:intron 25.0%
!!! CATCTTTTGATCATTTTTAG+AGG - chr4_3:60249792-60249811 None:intergenic 25.0%
! AAATAGAGAGATCAATAATG+TGG - chr4_3:60250007-60250026 None:intergenic 25.0%
! GATTTAATTGGTATACCTTA+TGG + chr4_3:60250092-60250111 Msa0652520:intron 25.0%
! GGAAAGAAAGAAAAATTATG+AGG + chr4_3:60250624-60250643 Msa0652520:intron 25.0%
! ATTCTTTCACATATGGTAAA+TGG - chr4_3:60250691-60250710 None:intergenic 25.0%
!! ATTTTATTGTCAAAATGAGG+AGG + chr4_3:60250879-60250898 Msa0652520:intron 25.0%
! AATCCAAAATCAAATTGAGT+AGG - chr4_3:60251280-60251299 None:intergenic 25.0%
!!! GCAATTATTTTGATTATCCT+TGG - chr4_3:60251632-60251651 None:intergenic 25.0%
! AAATGTAAAAAATGCAAAGG+GGG - chr4_3:60251708-60251727 None:intergenic 25.0%
! GAAATGTAAAAAATGCAAAG+GGG - chr4_3:60251709-60251728 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG + chr4_3:60251846-60251865 Msa0652520:intron 25.0%
! ATGCATCTAGTAATTTGAAA+AGG + chr4_3:60251882-60251901 Msa0652520:intron 25.0%
! TGCATCTAGTAATTTGAAAA+GGG + chr4_3:60251883-60251902 Msa0652520:intron 25.0%
! TCAAATGAGTGTTTAGATAT+AGG + chr4_3:60251932-60251951 Msa0652520:intron 25.0%
! CAAATGAGTGTTTAGATATA+GGG + chr4_3:60251933-60251952 Msa0652520:intron 25.0%
!! ATGAATTGATGATACTATGA+GGG + chr4_3:60252542-60252561 Msa0652520:intron 25.0%
!! AAAATTTTATGGTGAAGTCA+TGG - chr4_3:60252657-60252676 None:intergenic 25.0%
! TTGATTGTCATTATAGCTAT+CGG + chr4_3:60252693-60252712 Msa0652520:intron 25.0%
! ACTAGAAAACAAATATTCCT+TGG - chr4_3:60252770-60252789 None:intergenic 25.0%
! GAATTTCTTTCTATATCACT+TGG - chr4_3:60252801-60252820 None:intergenic 25.0%
! TAATTTCATAGGAGAGTTAT+TGG + chr4_3:60252914-60252933 Msa0652520:intron 25.0%
! ATCTTTACAACTATTATGCA+AGG + chr4_3:60253117-60253136 Msa0652520:intron 25.0%
! TTGATTTCCATTCATGAAAA+AGG + chr4_3:60253737-60253756 Msa0652520:intron 25.0%
! TTCTTTGCTTGAAAATTTGT+CGG - chr4_3:60254604-60254623 None:intergenic 25.0%
! AGATCATCAATTCAAAACAT+CGG + chr4_3:60254955-60254974 Msa0652520:intron 25.0%
! TAATTGAACGAGTAGAAAAT+GGG - chr4_3:60255096-60255115 None:intergenic 25.0%
! GTAGTAGTAAATAACTGTAA+TGG - chr4_3:60255128-60255147 None:intergenic 25.0%
! TATGCGTTGTATTAAATAGA+AGG + chr4_3:60255394-60255413 Msa0652520:intron 25.0%
!!! CTTTCTTCATGTTATTTTGA+CGG - chr4_3:60255429-60255448 None:intergenic 25.0%
! TGCAAAGAGTAAATAAAAGA+GGG - chr4_3:60255479-60255498 None:intergenic 25.0%
! TTGCAAAGAGTAAATAAAAG+AGG - chr4_3:60255480-60255499 None:intergenic 25.0%
! AGGAGAAGAAATATATAGAA+TGG - chr4_3:60255515-60255534 None:intergenic 25.0%
! AAAAATTAGAAGGAGTTGTT+TGG - chr4_3:60255800-60255819 None:intergenic 25.0%
!!! ATTTGGTTTTTTTCCTTGTT+GGG + chr4_3:60255921-60255940 Msa0652520:intron 25.0%
!! AACTATTTGATCTTTTCCAA+TGG + chr4_3:60256097-60256116 Msa0652520:intron 25.0%
! TTTACATTGTCAAGCAAATA+TGG - chr4_3:60256128-60256147 None:intergenic 25.0%
! TTGCTTGACAATGTAAATTT+AGG + chr4_3:60256131-60256150 Msa0652520:intron 25.0%
! ATCAGAATATTAATACTCCA+TGG + chr4_3:60256229-60256248 Msa0652520:intron 25.0%
!!! GCTTACGACAAATATTTTTT+AGG + chr4_3:60256317-60256336 Msa0652520:intron 25.0%
!!! TACGACAAATATTTTTTAGG+TGG + chr4_3:60256320-60256339 Msa0652520:intron 25.0%
! GAATCTCCAATATTAATGAT+GGG + chr4_3:60248505-60248524 Msa0652520:CDS 25.0%
! TCATTAATATGATTCTCAAC+CGG - chr4_3:60256818-60256837 None:intergenic 25.0%
! TTATCAAGAGAATATTCAAG+AGG + chr4_3:60256997-60257016 Msa0652520:CDS 25.0%
! GTGCTAAATAATTCCAATTA+AGG + chr4_3:60257229-60257248 Msa0652520:intron 25.0%
! AAAAATTGTTCAAACTAGCT+AGG - chr4_3:60257285-60257304 None:intergenic 25.0%
! AAGAATTTACGAACGTTAAA+AGG - chr4_3:60257638-60257657 None:intergenic 25.0%
! TTTAACGTTCGTAAATTCTT+TGG + chr4_3:60257638-60257657 Msa0652520:CDS 25.0%
AAAAAGTAGAAGGAGTTGTT+TGG - chr4_3:60247612-60247631 None:intergenic 30.0%
TACTAGAGATCATGTTTGTT+TGG - chr4_3:60247822-60247841 None:intergenic 30.0%
TTAGGATTTCAATGCAAGTA+AGG + chr4_3:60247943-60247962 Msa0652520:intron 30.0%
TTGCTTGAATGTGTGAATTT+AGG - chr4_3:60247972-60247991 None:intergenic 30.0%
GTAAACTTTGCATGTTTGAT+CGG + chr4_3:60248080-60248099 Msa0652520:intron 30.0%
GATAATGAAGAAAGAAATCC+TGG + chr4_3:60248129-60248148 Msa0652520:CDS 30.0%
ATCTTCTTGATTTCATCTAC+AGG - chr4_3:60248234-60248253 None:intergenic 30.0%
CGTGAACAATTAGAAGAATT+TGG + chr4_3:60248255-60248274 Msa0652520:CDS 30.0%
!!! TGCTTTTTTGTTTTTGCCTT+TGG - chr4_3:60248328-60248347 None:intergenic 30.0%
!!! GTTGTCTTTTTGATTTCTTG+GGG - chr4_3:60248356-60248375 None:intergenic 30.0%
!!! GGTTGTCTTTTTGATTTCTT+GGG - chr4_3:60248357-60248376 None:intergenic 30.0%
!!! TGGTTGTCTTTTTGATTTCT+TGG - chr4_3:60248358-60248377 None:intergenic 30.0%
GTTAGATATTGTGATTTCAC+TGG - chr4_3:60248478-60248497 None:intergenic 30.0%
GGAATCTCCAATATTAATGA+TGG + chr4_3:60248504-60248523 Msa0652520:CDS 30.0%
! AAAGAGGAAAATAGGGTTTT+AGG - chr4_3:60248624-60248643 None:intergenic 30.0%
CATTGAGAAAGAGGAAAATA+GGG - chr4_3:60248631-60248650 None:intergenic 30.0%
ATGGAGAATCATGTTAATGA+AGG + chr4_3:60248648-60248667 Msa0652520:CDS 30.0%
TGGAGAATCATGTTAATGAA+GGG + chr4_3:60248649-60248668 Msa0652520:CDS 30.0%
CACTTGATCAAAAAGATCAT+TGG - chr4_3:60248829-60248848 None:intergenic 30.0%
TGACACCAAAATTAAATTGC+GGG - chr4_3:60248899-60248918 None:intergenic 30.0%
GTGACACCAAAATTAAATTG+CGG - chr4_3:60248900-60248919 None:intergenic 30.0%
TGATCATCAGTAAAAAGGAA+TGG - chr4_3:60249005-60249024 None:intergenic 30.0%
! GAAGTTGATCATCAGTAAAA+AGG - chr4_3:60249010-60249029 None:intergenic 30.0%
TTTACTGATGATCAACTTCA+AGG + chr4_3:60249011-60249030 Msa0652520:CDS 30.0%
!!! TTAGTTGATGTTTGGTTTTC+AGG + chr4_3:60249189-60249208 Msa0652520:intron 30.0%
!!! GTTCCCAAATCATTTTGATT+AGG + chr4_3:60249682-60249701 Msa0652520:intron 30.0%
CTAATATAGATCAAGTCCAA+TGG - chr4_3:60249948-60249967 None:intergenic 30.0%
! ACTATATACGCACAATCTTT+TGG + chr4_3:60250282-60250301 Msa0652520:intron 30.0%
ATGCTGATAACTCAATTGTA+AGG - chr4_3:60250551-60250570 None:intergenic 30.0%
TGTTAGCTCATTTCAACTAT+AGG - chr4_3:60250602-60250621 None:intergenic 30.0%
!! AAGAATTTAGTTTGCGTGTT+AGG + chr4_3:60250705-60250724 Msa0652520:intron 30.0%
!!! TTGGTTTGTTAATGCACTTT+TGG + chr4_3:60250737-60250756 Msa0652520:intron 30.0%
!! GTGTATTGATAGCATGTTTT+CGG + chr4_3:60250774-60250793 Msa0652520:intron 30.0%
!! TTGCCTACTCAATTTGATTT+TGG + chr4_3:60251274-60251293 Msa0652520:intron 30.0%
TCATTGCTGATAAAGATTTG+TGG - chr4_3:60251609-60251628 None:intergenic 30.0%
AATGTAAAAAATGCAAAGGG+GGG - chr4_3:60251707-60251726 None:intergenic 30.0%
CATACAAACAAAGGACAATT+TGG - chr4_3:60251784-60251803 None:intergenic 30.0%
GCATCTAGTAATTTGAAAAG+GGG + chr4_3:60251884-60251903 Msa0652520:intron 30.0%
TTGAAAAGGGGTTTACATTT+AGG + chr4_3:60251896-60251915 Msa0652520:intron 30.0%
TGAAAAGGGGTTTACATTTA+GGG + chr4_3:60251897-60251916 Msa0652520:intron 30.0%
!! AGTCATAAAAGCATTCAGTA+CGG - chr4_3:60252050-60252069 None:intergenic 30.0%
! TATGATTCTAGTTGTTAGAC+AGG + chr4_3:60252128-60252147 Msa0652520:intron 30.0%
! ATGATTCTAGTTGTTAGACA+GGG + chr4_3:60252129-60252148 Msa0652520:intron 30.0%
TTGGATTTACAATGACAAAC+TGG + chr4_3:60252152-60252171 Msa0652520:intron 30.0%
TAATTTAAAGGGAGCTTCTA+TGG + chr4_3:60252244-60252263 Msa0652520:intron 30.0%
TCTTAAGTGTTACACTTTGT+GGG + chr4_3:60252461-60252480 Msa0652520:intron 30.0%
! GATGAATTGATGATACTATG+AGG + chr4_3:60252541-60252560 Msa0652520:intron 30.0%
! ATGATGGAACTATTTAGAGT+GGG - chr4_3:60252834-60252853 None:intergenic 30.0%
ACTCTAAATAGTTCCATCAT+GGG + chr4_3:60252834-60252853 Msa0652520:intron 30.0%
TTGATATGAAGAAGAAGACA+TGG + chr4_3:60252997-60253016 Msa0652520:intron 30.0%
!!! ATGTTCTTTTCAAGTATGAG+CGG + chr4_3:60253063-60253082 Msa0652520:intron 30.0%
AAAAAGATCGCAGTTGTTTA+TGG + chr4_3:60253157-60253176 Msa0652520:intron 30.0%
TTCCTAGAGTCTATAAAGAA+AGG + chr4_3:60253437-60253456 Msa0652520:intron 30.0%
TTCCTTTCTTTATAGACTCT+AGG - chr4_3:60253442-60253461 None:intergenic 30.0%
!! TCATGTTCCTTTTTCATGAA+TGG - chr4_3:60253747-60253766 None:intergenic 30.0%
GGGTATTTCAAAATAAACAG+CGG + chr4_3:60253921-60253940 Msa0652520:intron 30.0%
GGTATTTCAAAATAAACAGC+GGG + chr4_3:60253922-60253941 Msa0652520:intron 30.0%
!!! TGCTTTATTTTCCAACTCTA+GGG - chr4_3:60254019-60254038 None:intergenic 30.0%
AGAGATAATGCAACCAAATT+CGG + chr4_3:60254056-60254075 Msa0652520:intron 30.0%
ACATCAACTTAAACAAGACA+AGG + chr4_3:60254204-60254223 Msa0652520:intron 30.0%
! ACAAGGTAATGACAAAGTTT+TGG + chr4_3:60254221-60254240 Msa0652520:intron 30.0%
AACTAGCAATTTCTCAAGTT+TGG + chr4_3:60254930-60254949 Msa0652520:intron 30.0%
GTAATTGAACGAGTAGAAAA+TGG - chr4_3:60255097-60255116 None:intergenic 30.0%
TACAACGCATACATATAGAA+GGG - chr4_3:60255385-60255404 None:intergenic 30.0%
ATACAACGCATACATATAGA+AGG - chr4_3:60255386-60255405 None:intergenic 30.0%
!!! TGTTATTTTGACGGAAAATG+TGG - chr4_3:60255420-60255439 None:intergenic 30.0%
CTACAGTTACATATACAAAG+CGG + chr4_3:60255616-60255635 Msa0652520:intron 30.0%
!!! GATTTGGTTTTTTTCCTTGT+TGG + chr4_3:60255920-60255939 Msa0652520:intron 30.0%
!!! TTTGGTTTTTTTCCTTGTTG+GGG + chr4_3:60255922-60255941 Msa0652520:intron 30.0%
TTGCTTGAATGTGTGAATTT+AGG - chr4_3:60247972-60247991 None:intergenic 30.0%
CTAAACTTTGCATGTTTGAT+TGG + chr4_3:60256295-60256314 Msa0652520:intron 30.0%
! GTTTCCTGTTTCTTGTTATA+GGG - chr4_3:60256566-60256585 None:intergenic 30.0%
! TGTTTCCTGTTTCTTGTTAT+AGG - chr4_3:60256567-60256586 None:intergenic 30.0%
TCATCTTCCTCTAACAATAT+TGG + chr4_3:60256653-60256672 Msa0652520:CDS 30.0%
GGAATCTCCAATATTAATGA+TGG + chr4_3:60248504-60248523 Msa0652520:CDS 30.0%
CATTAATATGATTCTCAACC+GGG - chr4_3:60256817-60256836 None:intergenic 30.0%
TAGTGCTTAATGACATGATA+AGG + chr4_3:60256843-60256862 Msa0652520:intron 30.0%
! ATCAACATTTTCTTGAGGTA+GGG - chr4_3:60256915-60256934 None:intergenic 30.0%
TATGATAACATCATGACCTA+TGG + chr4_3:60256944-60256963 Msa0652520:CDS 30.0%
! TGACACCAAAATTAAGTTGT+GGG - chr4_3:60257057-60257076 None:intergenic 30.0%
TTTACTGACGATCAATTTCA+AGG + chr4_3:60257169-60257188 Msa0652520:intron 30.0%
GTACATTCAAAGTTAATGCA+GGG + chr4_3:60257612-60257631 Msa0652520:CDS 30.0%
GGGATAGATAGAGAAAGTAA+GGG - chr4_3:60247450-60247469 None:intergenic 35.0%
TGGGATAGATAGAGAAAGTA+AGG - chr4_3:60247451-60247470 None:intergenic 35.0%
! CTCGTAAGAAGAAAGTACAT+TGG + chr4_3:60247497-60247516 Msa0652520:CDS 35.0%
! GGTGACTTTATAAACTTGCT+TGG - chr4_3:60247523-60247542 None:intergenic 35.0%
TGTTTATATGTCCCCTAACA+TGG - chr4_3:60247792-60247811 None:intergenic 35.0%
TTTACACCGTCAAGCAAATA+TGG - chr4_3:60247922-60247941 None:intergenic 35.0%
TTGCTTGACGGTGTAAATTT+AGG + chr4_3:60247925-60247944 Msa0652520:intron 35.0%
TTCTTGATTTCATCTACAGG+TGG - chr4_3:60248231-60248250 None:intergenic 35.0%
!!! CTTTTTGATTTCTTGGGGTA+GGG - chr4_3:60248351-60248370 None:intergenic 35.0%
!!! TCTTTTTGATTTCTTGGGGT+AGG - chr4_3:60248352-60248371 None:intergenic 35.0%
ATTTGTGGGAGAGAGTTATT+AGG - chr4_3:60248396-60248415 None:intergenic 35.0%
! GAAGATGATGAAGATGGATT+AGG - chr4_3:60248432-60248451 None:intergenic 35.0%
TTAGAGGAAGATGATGAAGA+TGG - chr4_3:60248438-60248457 None:intergenic 35.0%
CACTCTCCCATCATTAATAT+TGG - chr4_3:60248514-60248533 None:intergenic 35.0%
! TATTAATGATGGGAGAGTGT+TGG + chr4_3:60248515-60248534 Msa0652520:CDS 35.0%
!! GTATCATCTTGCTTTTGGTT+CGG - chr4_3:60248564-60248583 None:intergenic 35.0%
!!! GGTTTTAGGTAGTTGTAGAT+CGG - chr4_3:60248610-60248629 None:intergenic 35.0%
CCATTGAGAAAGAGGAAAAT+AGG - chr4_3:60248632-60248651 None:intergenic 35.0%
! CCTATTTTCCTCTTTCTCAA+TGG + chr4_3:60248629-60248648 Msa0652520:CDS 35.0%
ATGATTCTCCATTGAGAAAG+AGG - chr4_3:60248640-60248659 None:intergenic 35.0%
GGAGAATCATGTTAATGAAG+GGG + chr4_3:60248650-60248669 Msa0652520:CDS 35.0%
TAATGACATGACAACACTAG+AGG + chr4_3:60248680-60248699 Msa0652520:CDS 35.0%
AATGACATGACAACACTAGA+GGG + chr4_3:60248681-60248700 Msa0652520:CDS 35.0%
! TCAACATTTTGTTGAGGTGA+GGG - chr4_3:60248744-60248763 None:intergenic 35.0%
! ATCAACATTTTGTTGAGGTG+AGG - chr4_3:60248745-60248764 None:intergenic 35.0%
! GGAAGATCAACATTTTGTTG+AGG - chr4_3:60248750-60248769 None:intergenic 35.0%
TGATCAAGTGAATGTTCAAG+AGG + chr4_3:60248839-60248858 Msa0652520:CDS 35.0%
! AATTAAATTGCGGGTCTTGT+TGG - chr4_3:60248890-60248909 None:intergenic 35.0%
!! CAAGACCCGCAATTTAATTT+TGG + chr4_3:60248891-60248910 Msa0652520:CDS 35.0%
AAAAGGAATGGAATATCAGC+AGG - chr4_3:60248993-60249012 None:intergenic 35.0%
ACCCAAAATTTCAAGCACAA+GGG + chr4_3:60249067-60249086 Msa0652520:intron 35.0%
! ACCCTTGTGCTTGAAATTTT+GGG - chr4_3:60249071-60249090 None:intergenic 35.0%
! TACCCTTGTGCTTGAAATTT+TGG - chr4_3:60249072-60249091 None:intergenic 35.0%
!!! GATGTTTGGTTTTCAGGTTT+TGG + chr4_3:60249195-60249214 Msa0652520:intron 35.0%
AAGGATTCACGAACGTTAAA+GGG - chr4_3:60249288-60249307 None:intergenic 35.0%
AAAGGATTCACGAACGTTAA+AGG - chr4_3:60249289-60249308 None:intergenic 35.0%
TTTAACGTTCGTGAATCCTT+TGG + chr4_3:60249288-60249307 Msa0652520:CDS 35.0%
AAAAAAAGAGGATCCACCAT+TGG + chr4_3:60249929-60249948 Msa0652520:intron 35.0%
ATATAGATCAAGTCCAATGG+TGG - chr4_3:60249945-60249964 None:intergenic 35.0%
TGTGAAGTGATAGGAAAAGA+GGG - chr4_3:60249977-60249996 None:intergenic 35.0%
GGTAAATAGTGTGAAGTGAT+AGG - chr4_3:60249986-60250005 None:intergenic 35.0%
!!! GACACGCATTTTTTTCAAAC+TGG + chr4_3:60250310-60250329 Msa0652520:intron 35.0%
GATGAAATGTTTGAGAGTGA+TGG + chr4_3:60250469-60250488 Msa0652520:intron 35.0%
ACAATTGAGTTATCAGCATG+CGG + chr4_3:60250552-60250571 Msa0652520:intron 35.0%
TAGTTGAAATGAGCTAACAC+CGG + chr4_3:60250603-60250622 Msa0652520:intron 35.0%
! TGTTTTCGGCTTTCAAAATG+TGG + chr4_3:60250788-60250807 Msa0652520:intron 35.0%
TCAAAATGAGGAGGAGATAA+TGG + chr4_3:60250888-60250907 Msa0652520:intron 35.0%
!!! GCGCGTTTTTGAAACAATTT+TGG + chr4_3:60250983-60251002 Msa0652520:intron 35.0%
TTACTGAACTCAATCACTTG+CGG + chr4_3:60251054-60251073 Msa0652520:intron 35.0%
TTGAAGTCTATCTTGAACAG+AGG + chr4_3:60251098-60251117 Msa0652520:intron 35.0%
TCTTCATCGTTGTTGTATGA+AGG - chr4_3:60251158-60251177 None:intergenic 35.0%
! CTACTTCAAGAGCATATTCA+AGG + chr4_3:60251502-60251521 Msa0652520:intron 35.0%
ATCTTTATCAGCAATGACCA+AGG + chr4_3:60251612-60251631 Msa0652520:intron 35.0%
TGAGTGTTTAGATATAGGGA+CGG + chr4_3:60251937-60251956 Msa0652520:intron 35.0%
AAGTAAACTCTTGATCTGAG+TGG + chr4_3:60251983-60252002 Msa0652520:intron 35.0%
TAGTAATGCTTGCAACATCT+TGG + chr4_3:60252370-60252389 Msa0652520:intron 35.0%
GTCTTAAGTGTTACACTTTG+TGG + chr4_3:60252460-60252479 Msa0652520:intron 35.0%
CTTAAGTGTTACACTTTGTG+GGG + chr4_3:60252462-60252481 Msa0652520:intron 35.0%
TGTTACGCTTATAACAAGGT+AGG + chr4_3:60252485-60252504 Msa0652520:intron 35.0%
TGATGCCATTGTACAAACAA+TGG + chr4_3:60252574-60252593 Msa0652520:intron 35.0%
GATGCCATTGTACAAACAAT+GGG + chr4_3:60252575-60252594 Msa0652520:intron 35.0%
ATGCCATTGTACAAACAATG+GGG + chr4_3:60252576-60252595 Msa0652520:intron 35.0%
TCCATTAAAGAAGTTGACCA+AGG + chr4_3:60252750-60252769 Msa0652520:intron 35.0%
TCCTTGGTCAACTTCTTTAA+TGG - chr4_3:60252754-60252773 None:intergenic 35.0%
! GAACTATTTAGAGTGGGATT+TGG - chr4_3:60252828-60252847 None:intergenic 35.0%
! CATGATGGAACTATTTAGAG+TGG - chr4_3:60252835-60252854 None:intergenic 35.0%
CACTCTAAATAGTTCCATCA+TGG + chr4_3:60252833-60252852 Msa0652520:intron 35.0%
GGGTTTATGTCAGAAGAATT+TGG + chr4_3:60252879-60252898 Msa0652520:intron 35.0%
AGACATGGAACAGTATAAAG+AGG + chr4_3:60253012-60253031 Msa0652520:intron 35.0%
ATGGTTTGAGAAATTGCAAG+CGG + chr4_3:60253176-60253195 Msa0652520:intron 35.0%
ACATGGTGTTTGTGATCTAA+TGG + chr4_3:60253220-60253239 Msa0652520:intron 35.0%
! TCACTTGAGTTTAAAGCAAG+TGG + chr4_3:60253678-60253697 Msa0652520:intron 35.0%
! TTGAGTTTAAAGCAAGTGGT+TGG + chr4_3:60253682-60253701 Msa0652520:intron 35.0%
!! TTTATTTTCCAACTCTAGGG+TGG - chr4_3:60254016-60254035 None:intergenic 35.0%
!!! CTGCTTTATTTTCCAACTCT+AGG - chr4_3:60254020-60254039 None:intergenic 35.0%
! ACTAGTTGATGCAAGAACAA+CGG + chr4_3:60254429-60254448 Msa0652520:intron 35.0%
AAAATGACAGTCGTAGATGA+TGG + chr4_3:60254624-60254643 Msa0652520:intron 35.0%
! ATACAGGTTTGGAATAAAGG+TGG - chr4_3:60254687-60254706 None:intergenic 35.0%
! GCTATACAGGTTTGGAATAA+AGG - chr4_3:60254690-60254709 None:intergenic 35.0%
TTCCAAACCTGTATAGCAAA+CGG + chr4_3:60254693-60254712 Msa0652520:intron 35.0%
ACGTGTACTAACTTTAACCA+TGG + chr4_3:60254901-60254920 Msa0652520:intron 35.0%
TACTAACTTTAACCATGGTG+TGG + chr4_3:60254906-60254925 Msa0652520:intron 35.0%
!! GTTCTTTCTTTAGGGTTTCT+TGG - chr4_3:60255050-60255069 None:intergenic 35.0%
CTACTTTCCCTTTACTTCAT+TGG + chr4_3:60255300-60255319 Msa0652520:intron 35.0%
CACATCACCAATGAAGTAAA+GGG - chr4_3:60255310-60255329 None:intergenic 35.0%
ACACATCACCAATGAAGTAA+AGG - chr4_3:60255311-60255330 None:intergenic 35.0%
CTTACACTGAAGAAAATTGC+TGG - chr4_3:60255590-60255609 None:intergenic 35.0%
! AGATCGATAGTTGATGTACT+GGG - chr4_3:60255655-60255674 None:intergenic 35.0%
ATGCAGAAGATTCTGATTGT+TGG - chr4_3:60255745-60255764 None:intergenic 35.0%
AACAATCAGAATCTTCTGCA+TGG + chr4_3:60255744-60255763 Msa0652520:intron 35.0%
AAACCATTGAAGAGAGAAGA+GGG - chr4_3:60255777-60255796 None:intergenic 35.0%
!!! TTGGTTTTTTTCCTTGTTGG+GGG + chr4_3:60255923-60255942 Msa0652520:intron 35.0%
TCATTACACTGTATGAACCA+TGG - chr4_3:60256249-60256268 None:intergenic 35.0%
!! TATAGATGGCTTTGAGAATG+CGG - chr4_3:60256406-60256425 None:intergenic 35.0%
TCAAAGCCATCTATAACTCA+GGG + chr4_3:60256411-60256430 Msa0652520:CDS 35.0%
TTCTTAATCTCATCTCTACG+TGG - chr4_3:60256446-60256465 None:intergenic 35.0%
GATGAGATTAAGAAGATACG+TGG + chr4_3:60256452-60256471 Msa0652520:CDS 35.0%
CGTGGACAATTAGAAGAATT+TGG + chr4_3:60256470-60256489 Msa0652520:CDS 35.0%
TTAGAAGAATTTGGACCGAT+TGG + chr4_3:60256479-60256498 Msa0652520:CDS 35.0%
TTGAAACCAATAAAAGACGC+TGG - chr4_3:60256510-60256529 None:intergenic 35.0%
! CTTGTTATAGGGTACTTTGT+TGG - chr4_3:60256555-60256574 None:intergenic 35.0%
AGTACCCTATAACAAGAAAC+AGG + chr4_3:60256559-60256578 Msa0652520:CDS 35.0%
GGAGATTCCAATATTGTTAG+AGG - chr4_3:60248493-60248512 None:intergenic 35.0%
! CTCCAATATTAATGATGGGA+CGG + chr4_3:60248509-60248528 Msa0652520:CDS 35.0%
! GATCAACATTTTCTTGAGGT+AGG - chr4_3:60256916-60256935 None:intergenic 35.0%
! AGCAGATCAACATTTTCTTG+AGG - chr4_3:60256920-60256939 None:intergenic 35.0%
AACATCATGACCTATGGAAA+TGG + chr4_3:60256950-60256969 Msa0652520:CDS 35.0%
! AATTAAGTTGTGGGTCTTGT+TGG - chr4_3:60257048-60257067 None:intergenic 35.0%
! CAAGACCCACAACTTAATTT+TGG + chr4_3:60257049-60257068 Msa0652520:CDS 35.0%
! GTGACACCAAAATTAAGTTG+TGG - chr4_3:60257058-60257077 None:intergenic 35.0%
AAAGAGGAATGGAACATCAT+GGG - chr4_3:60257152-60257171 None:intergenic 35.0%
TAAAGAGGAATGGAACATCA+TGG - chr4_3:60257153-60257172 None:intergenic 35.0%
GAAATTGATCGTCAGTAAAG+AGG - chr4_3:60257168-60257187 None:intergenic 35.0%
! TACCCGGTGCTTTATATTTT+GGG - chr4_3:60257429-60257448 None:intergenic 35.0%
! ATACCCGGTGCTTTATATTT+TGG - chr4_3:60257430-60257449 None:intergenic 35.0%
AATTGTTGTGTGTGTTTCTC+AGG + chr4_3:60257539-60257558 Msa0652520:intron 35.0%
TGTAGGGTGATTACTATCAA+CGG + chr4_3:60257590-60257609 Msa0652520:CDS 35.0%
GGTACATTCAAAGTTAATGC+AGG + chr4_3:60257611-60257630 Msa0652520:CDS 35.0%
TGATCGATCGTTGATATGCT+GGG - chr4_3:60247470-60247489 None:intergenic 40.0%
TATCAACGATCGATCAGCAA+TGG + chr4_3:60247474-60247493 Msa0652520:exon 40.0%
!! ATGCAGACGATTTTGATGGT+TGG - chr4_3:60247560-60247579 None:intergenic 40.0%
AACCATCAAAATCGTCTGCA+TGG + chr4_3:60247559-60247578 Msa0652520:CDS 40.0%
! TACCATGCAGACGATTTTGA+TGG - chr4_3:60247564-60247583 None:intergenic 40.0%
AGCAAATATGGTCAGACCAT+TGG - chr4_3:60247910-60247929 None:intergenic 40.0%
GTCTGACCATATTTGCTTGA+CGG + chr4_3:60247913-60247932 Msa0652520:intron 40.0%
AAGAAAGAAATCCTGGACCA+AGG + chr4_3:60248136-60248155 Msa0652520:CDS 40.0%
TGTAGATTGCTTCCAGAATG+CGG - chr4_3:60248191-60248210 None:intergenic 40.0%
TGGAAGCAATCTACAACTCA+GGG + chr4_3:60248196-60248215 Msa0652520:CDS 40.0%
! GTGATTCGAGTGTCTTTTAC+TGG + chr4_3:60248286-60248305 Msa0652520:CDS 40.0%
TTTCAAAACCGCAAGTCCAA+AGG + chr4_3:60248309-60248328 Msa0652520:CDS 40.0%
!! TGTTTTTGCCTTTGGACTTG+CGG - chr4_3:60248320-60248339 None:intergenic 40.0%
!! GATGATGAAGATGGATTAGG+TGG - chr4_3:60248429-60248448 None:intergenic 40.0%
TATTGTGATTTCACTGGGAG+AGG - chr4_3:60248472-60248491 None:intergenic 40.0%
GGAGAGATTGTGGATGAATT+AGG - chr4_3:60248543-60248562 None:intergenic 40.0%
! TTGTAGATCGGTTTCAGTTG+GGG - chr4_3:60248598-60248617 None:intergenic 40.0%
! GTTGTAGATCGGTTTCAGTT+GGG - chr4_3:60248599-60248618 None:intergenic 40.0%
! AGTTGTAGATCGGTTTCAGT+TGG - chr4_3:60248600-60248619 None:intergenic 40.0%
ATGACATGACAACACTAGAG+GGG + chr4_3:60248682-60248701 Msa0652520:CDS 40.0%
GTGAGGGTTCAATCATATTC+GGG - chr4_3:60248728-60248747 None:intergenic 40.0%
GGTGAGGGTTCAATCATATT+CGG - chr4_3:60248729-60248748 None:intergenic 40.0%
GTGCATGTGCATCATATTCA+TGG - chr4_3:60248868-60248887 None:intergenic 40.0%
CACCCAAAATTTCAAGCACA+AGG + chr4_3:60249066-60249085 Msa0652520:intron 40.0%
!!! TTGGTTTTCAGGTTTTGGTG+AGG + chr4_3:60249200-60249219 Msa0652520:intron 40.0%
GTTAACCTCGATTACTTCGT+TGG - chr4_3:60249259-60249278 None:intergenic 40.0%
AAGTAATCGAGGTTAACGCA+GGG + chr4_3:60249262-60249281 Msa0652520:CDS 40.0%
CAGAACTGCTCTATTACCAA+AGG - chr4_3:60249307-60249326 None:intergenic 40.0%
TGAGTGAACAACAGTTGCTT+AGG + chr4_3:60249506-60249525 Msa0652520:intron 40.0%
TGAAGTGATAGGAAAAGAGG+GGG - chr4_3:60249975-60249994 None:intergenic 40.0%
GTGAAGTGATAGGAAAAGAG+GGG - chr4_3:60249976-60249995 None:intergenic 40.0%
GTGTGAAGTGATAGGAAAAG+AGG - chr4_3:60249978-60249997 None:intergenic 40.0%
TTATCAGCATGCGGTTGAAT+TGG + chr4_3:60250561-60250580 Msa0652520:intron 40.0%
GCGTGTTAGGATTAAGAGTT+TGG + chr4_3:60250718-60250737 Msa0652520:intron 40.0%
TTCGGCTTTCAAAATGTGGA+CGG + chr4_3:60250792-60250811 Msa0652520:intron 40.0%
!! ATGAGGAGGAGATAATGGAA+CGG + chr4_3:60250893-60250912 Msa0652520:intron 40.0%
TGTTTAGATATAGGGACGGA+GGG + chr4_3:60251941-60251960 Msa0652520:intron 40.0%
! TTCTAGTTGTTAGACAGGGT+TGG + chr4_3:60252133-60252152 Msa0652520:intron 40.0%
! ATTGATGATACTATGAGGGC+TGG + chr4_3:60252546-60252565 Msa0652520:intron 40.0%
ACACCCCATTGTTTGTACAA+TGG - chr4_3:60252582-60252601 None:intergenic 40.0%
! ATTTAGAGTGGGATTTGGCT+AGG - chr4_3:60252823-60252842 None:intergenic 40.0%
CAAGTGTACCATATGCGATA+GGG + chr4_3:60252859-60252878 Msa0652520:intron 40.0%
GACATAAACCCTATCGCATA+TGG - chr4_3:60252870-60252889 None:intergenic 40.0%
GAAGTCATGAAGTGATGCTA+AGG + chr4_3:60253040-60253059 Msa0652520:intron 40.0%
TGGTGTTTGTGATCTAATGG+CGG + chr4_3:60253223-60253242 Msa0652520:intron 40.0%
TGTTAGGGATGTGGAAGTTT+GGG - chr4_3:60253275-60253294 None:intergenic 40.0%
GTGAGACATAAAACTGCTTC+AGG - chr4_3:60253413-60253432 None:intergenic 40.0%
!! TGACATGCAATTTGATAGCG+CGG - chr4_3:60254142-60254161 None:intergenic 40.0%
GTTTGCACTCAGCTTTACAA+TGG - chr4_3:60254170-60254189 None:intergenic 40.0%
! CTCTGATGGTACTTTTGTTC+TGG - chr4_3:60254247-60254266 None:intergenic 40.0%
ATCTGTGTTCATGACTCTGA+TGG - chr4_3:60254261-60254280 None:intergenic 40.0%
! CTAGTTGATGCAAGAACAAC+GGG + chr4_3:60254430-60254449 Msa0652520:intron 40.0%
! TATGGTCACTGATTGACAGT+TGG - chr4_3:60254466-60254485 None:intergenic 40.0%
GTCAATCAGTGACCATATTC+CGG + chr4_3:60254469-60254488 Msa0652520:intron 40.0%
TCAATCAGTGACCATATTCC+GGG + chr4_3:60254470-60254489 Msa0652520:intron 40.0%
! CAACTGTAATGTGGAGCATT+TGG - chr4_3:60254560-60254579 None:intergenic 40.0%
AACGTCTGACAACTGTAATG+TGG - chr4_3:60254569-60254588 None:intergenic 40.0%
TTGGAATAAAGGTGGCCTAT+GGG - chr4_3:60254679-60254698 None:intergenic 40.0%
! TTTGGAATAAAGGTGGCCTA+TGG - chr4_3:60254680-60254699 None:intergenic 40.0%
AATTGCTAGTTACCACACCA+TGG - chr4_3:60254921-60254940 None:intergenic 40.0%
TGAACGAGTAGAAAATGGGA+GGG - chr4_3:60255092-60255111 None:intergenic 40.0%
TTGAACGAGTAGAAAATGGG+AGG - chr4_3:60255093-60255112 None:intergenic 40.0%
TTTCACGCAAGTATGATCGA+TGG - chr4_3:60255171-60255190 None:intergenic 40.0%
GCAAGTAAAGCTGACAAACA+TGG + chr4_3:60255236-60255255 Msa0652520:intron 40.0%
! CAGATCGATAGTTGATGTAC+TGG - chr4_3:60255656-60255675 None:intergenic 40.0%
CATCAACTATCGATCTGTGA+TGG + chr4_3:60255659-60255678 Msa0652520:intron 40.0%
GACCAATGTACTTTCTTCGA+GGG - chr4_3:60255687-60255706 None:intergenic 40.0%
TGACCAATGTACTTTCTTCG+AGG - chr4_3:60255688-60255707 None:intergenic 40.0%
! AGAAAGTACATTGGTCAGAC+AGG + chr4_3:60255691-60255710 Msa0652520:intron 40.0%
AACCATTGAAGAGAGAAGAG+GGG - chr4_3:60255776-60255795 None:intergenic 40.0%
GAAACCATTGAAGAGAGAAG+AGG - chr4_3:60255778-60255797 None:intergenic 40.0%
AGCAAATATGGTCAGACCAT+TGG - chr4_3:60247910-60247929 None:intergenic 40.0%
GATGATGAAGAAAGAACTCC+TGG + chr4_3:60256344-60256363 Msa0652520:CDS 40.0%
CTCAAAGCCATCTATAACTC+AGG + chr4_3:60256410-60256429 Msa0652520:CDS 40.0%
! GTGATTCCAGCGTCTTTTAT+TGG + chr4_3:60256501-60256520 Msa0652520:CDS 40.0%
! GATGATGAAGATGAGTTGAG+TGG - chr4_3:60256638-60256657 None:intergenic 40.0%
CACCGTCCCATCATTAATAT+TGG - chr4_3:60256684-60256703 None:intergenic 40.0%
! TATTAATGATGGGACGGTGA+TGG + chr4_3:60256685-60256704 Msa0652520:CDS 40.0%
AGAGAGATTGCAGGTGAATT+AGG - chr4_3:60256713-60256732 None:intergenic 40.0%
! GATAAGTACCACCTTGGTTT+TGG - chr4_3:60256739-60256758 None:intergenic 40.0%
TAATGACATGATAAGGCCAG+AGG + chr4_3:60256850-60256869 Msa0652520:CDS 40.0%
AATGACATGATAAGGCCAGA+GGG + chr4_3:60256851-60256870 Msa0652520:CDS 40.0%
GAGAAGTAATTAAACCCCTC+TGG - chr4_3:60248699-60248718 None:intergenic 40.0%
! GGTAGGGATTGACTCATATT+TGG - chr4_3:60256899-60256918 None:intergenic 40.0%
TGAGCAGTTTCCATTTCCAT+AGG - chr4_3:60256963-60256982 None:intergenic 40.0%
AAGAGGAATGGAACATCATG+GGG - chr4_3:60257151-60257170 None:intergenic 40.0%
TGATCGTCAGTAAAGAGGAA+TGG - chr4_3:60257163-60257182 None:intergenic 40.0%
!! TTTTCAGGAAGTGACTAGCT+AGG - chr4_3:60257344-60257363 None:intergenic 40.0%
GCTAGTCACTTCCTGAAAAA+CGG + chr4_3:60257345-60257364 Msa0652520:intron 40.0%
!! GTCTAAACCTTCCGTTTTTC+AGG - chr4_3:60257359-60257378 None:intergenic 40.0%
! ACCCGGTGCTTTATATTTTG+GGG - chr4_3:60257428-60257447 None:intergenic 40.0%
! TGTGTGTGTTTCTCAGGTTT+TGG + chr4_3:60257545-60257564 Msa0652520:intron 40.0%
ACGATGGTACAGCAAAATGT+AGG + chr4_3:60257573-60257592 Msa0652520:CDS 40.0%
CGATGGTACAGCAAAATGTA+GGG + chr4_3:60257574-60257593 Msa0652520:CDS 40.0%
GTTCGTAAATTCTTTGGCGA+TGG + chr4_3:60257644-60257663 Msa0652520:CDS 40.0%
CTGATCGATCGTTGATATGC+TGG - chr4_3:60247471-60247490 None:intergenic 45.0%
TGGTTGGAGTTCGACGAATT+TGG - chr4_3:60247544-60247563 None:intergenic 45.0%
AGACCATTGAAGAGAGAGGA+GGG - chr4_3:60247589-60247608 None:intergenic 45.0%
TTGGAGACCATTGAAGAGAG+AGG - chr4_3:60247593-60247612 None:intergenic 45.0%
CTGGAAGCAATCTACAACTC+AGG + chr4_3:60248195-60248214 Msa0652520:CDS 45.0%
TTAGGAGCTGGATCTGCAAT+TGG - chr4_3:60248378-60248397 None:intergenic 45.0%
!! GATGAAGATGGATTAGGTGG+TGG - chr4_3:60248426-60248445 None:intergenic 45.0%
! AGAGGCTCTTTGGTGATTAG+AGG - chr4_3:60248454-60248473 None:intergenic 45.0%
!!! CTTTTGGTTCGGAGAGATTG+TGG - chr4_3:60248553-60248572 None:intergenic 45.0%
TGCACATTGCACACGTCTAT+GGG - chr4_3:60249113-60249132 None:intergenic 45.0%
ATGCACATTGCACACGTCTA+TGG - chr4_3:60249114-60249133 None:intergenic 45.0%
ATAGACGTGTGCAATGTGCA+TGG + chr4_3:60249113-60249132 Msa0652520:intron 45.0%
!! TCAGGTTTTGGTGAGGAAGA+TGG + chr4_3:60249207-60249226 Msa0652520:intron 45.0%
TACTGCCAACGAAGTAATCG+AGG + chr4_3:60249251-60249270 Msa0652520:CDS 45.0%
GAAGTAATCGAGGTTAACGC+AGG + chr4_3:60249261-60249280 Msa0652520:CDS 45.0%
! TCCATGGTAGAGTGAGTTGA+GGG - chr4_3:60249376-60249395 None:intergenic 45.0%
CCACGTAATAATCAGCTCCA+TGG - chr4_3:60249392-60249411 None:intergenic 45.0%
CCATGGAGCTGATTATTACG+TGG + chr4_3:60249389-60249408 Msa0652520:CDS 45.0%
TCGGCTTTCAAAATGTGGAC+GGG + chr4_3:60250793-60250812 Msa0652520:intron 45.0%
!! AGGAGATAATGGAACGGCTA+GGG + chr4_3:60250899-60250918 Msa0652520:intron 45.0%
TTGCAGTTGCTGAACTTCAG+AGG + chr4_3:60251198-60251217 Msa0652520:intron 45.0%
CTGAACTTCAGAGGAGGATA+CGG + chr4_3:60251207-60251226 Msa0652520:intron 45.0%
ACGTTGCTTCTTCGTGATGA+TGG + chr4_3:60251236-60251255 Msa0652520:intron 45.0%
CGTTGCTTCTTCGTGATGAT+GGG + chr4_3:60251237-60251256 Msa0652520:intron 45.0%
GCAAAGGGGGGTTACATTAA+GGG - chr4_3:60251695-60251714 None:intergenic 45.0%
TGCAAAGGGGGGTTACATTA+AGG - chr4_3:60251696-60251715 None:intergenic 45.0%
GTGTTTAGATATAGGGACGG+AGG + chr4_3:60251940-60251959 Msa0652520:intron 45.0%
! GGGGTGTTACGCTTATAACA+AGG + chr4_3:60252481-60252500 Msa0652520:intron 45.0%
CCTATCGCATATGGTACACT+TGG - chr4_3:60252861-60252880 None:intergenic 45.0%
CCAAGTGTACCATATGCGAT+AGG + chr4_3:60252858-60252877 Msa0652520:intron 45.0%
AATTGCAAGCGGATGTCAAG+AGG + chr4_3:60253187-60253206 Msa0652520:intron 45.0%
GTGTTAGGGATGTGGAAGTT+TGG - chr4_3:60253276-60253295 None:intergenic 45.0%
!! GTCGTTTCTAGCTGGTGTTA+GGG - chr4_3:60253290-60253309 None:intergenic 45.0%
!! TGTCGTTTCTAGCTGGTGTT+AGG - chr4_3:60253291-60253310 None:intergenic 45.0%
ACACCAGCTAGAAACGACAA+TGG + chr4_3:60253292-60253311 Msa0652520:intron 45.0%
AGTCTTGATCCTATGCATGC+TGG + chr4_3:60253343-60253362 Msa0652520:intron 45.0%
GTCTTGATCCTATGCATGCT+GGG + chr4_3:60253344-60253363 Msa0652520:intron 45.0%
! AAGAGCATGAGCAACCTCAT+TGG + chr4_3:60253972-60253991 Msa0652520:intron 45.0%
!! ACTCTAGGGTGGAGTTTGTT+AGG - chr4_3:60254005-60254024 None:intergenic 45.0%
AACAAACTCCACCCTAGAGT+TGG + chr4_3:60254005-60254024 Msa0652520:intron 45.0%
AGGAACGACACATCCGAATT+TGG - chr4_3:60254072-60254091 None:intergenic 45.0%
GTCGTTCCTGTCAGAAAGAA+AGG + chr4_3:60254083-60254102 Msa0652520:intron 45.0%
CTGATGCCTTTCTTTCTGAC+AGG - chr4_3:60254092-60254111 None:intergenic 45.0%
!! TGATAGCGCGGCTTTTGAAA+CGG - chr4_3:60254130-60254149 None:intergenic 45.0%
CACAGATGCCAATACCTCTT+CGG + chr4_3:60254274-60254293 Msa0652520:intron 45.0%
CATTTATATCTCCCCGCCAT+AGG + chr4_3:60254330-60254349 Msa0652520:intron 45.0%
TGTCACAGAAACCAGCACTA+TGG - chr4_3:60254508-60254527 None:intergenic 45.0%
CTTCCCAAACTCGAAGATTG+CGG + chr4_3:60254529-60254548 Msa0652520:intron 45.0%
! ACACCGCAATCTTCGAGTTT+GGG - chr4_3:60254535-60254554 None:intergenic 45.0%
! AACACCGCAATCTTCGAGTT+TGG - chr4_3:60254536-60254555 None:intergenic 45.0%
CGTGTTGAATAGAACCCCAT+AGG + chr4_3:60254661-60254680 Msa0652520:intron 45.0%
TGGAATAAAGGTGGCCTATG+GGG - chr4_3:60254678-60254697 None:intergenic 45.0%
!! GTCCGTTTGCTATACAGGTT+TGG - chr4_3:60254698-60254717 None:intergenic 45.0%
!! CTCTTGTCCGTTTGCTATAC+AGG - chr4_3:60254703-60254722 None:intergenic 45.0%
!! GGTTTCTTGGATTGACTCGA+AGG - chr4_3:60255037-60255056 None:intergenic 45.0%
TCGATGGAAGAGAAGAGAAG+AGG - chr4_3:60255155-60255174 None:intergenic 45.0%
GGATGAATCGATGGAAGAGA+AGG - chr4_3:60255535-60255554 None:intergenic 45.0%
!! AGCAATGGTGGATGAATCGA+TGG - chr4_3:60255544-60255563 None:intergenic 45.0%
! CTCCCTCGAAGAAAGTACAT+TGG + chr4_3:60255682-60255701 Msa0652520:intron 45.0%
CGTTTATATGACCCCCAACA+AGG - chr4_3:60255937-60255956 None:intergenic 45.0%
AAGAAAGAACTCCTGGACCA+AGG + chr4_3:60256351-60256370 Msa0652520:CDS 45.0%
! TTGAGAATGCGGATTTGCTC+AGG - chr4_3:60256395-60256414 None:intergenic 45.0%
CGTCATCCCTGAGTTATAGA+TGG - chr4_3:60256420-60256439 None:intergenic 45.0%
AAGACGCTGGAATCACCAAT+CGG - chr4_3:60256497-60256516 None:intergenic 45.0%
ATTTGTGGGAGAGAGCTATC+TGG - chr4_3:60256605-60256624 None:intergenic 45.0%
! GATGAAGATGAGTTGAGTGG+TGG - chr4_3:60256635-60256654 None:intergenic 45.0%
!!! TTTTGGCTCAGAGAGATTGC+AGG - chr4_3:60256722-60256741 None:intergenic 45.0%
ATCTCTCTGAGCCAAAACCA+AGG + chr4_3:60256725-60256744 Msa0652520:CDS 45.0%
TGTGAGGATAAGTACCACCT+TGG - chr4_3:60256745-60256764 None:intergenic 45.0%
! AAAGAGGAAAACGAGGGTGT+AGG - chr4_3:60256794-60256813 None:intergenic 45.0%
ATGATTCTCAACCGGGAAAG+AGG - chr4_3:60256810-60256829 None:intergenic 45.0%
ATGACATGATAAGGCCAGAG+GGG + chr4_3:60256852-60256871 Msa0652520:CDS 45.0%
ATGGGGTGCACTATTGTCAA+TGG - chr4_3:60257134-60257153 None:intergenic 45.0%
GTCACTTCCTGAAAAACGGA+AGG + chr4_3:60257349-60257368 Msa0652520:intron 45.0%
!! CCGGTGCTTTATATTTTGGG+GGG - chr4_3:60257426-60257445 None:intergenic 45.0%
CCCCCCAAAATATAAAGCAC+CGG + chr4_3:60257423-60257442 Msa0652520:intron 45.0%
!! CCCGGTGCTTTATATTTTGG+GGG - chr4_3:60257427-60257446 None:intergenic 45.0%
! CCCCCAAAATATAAAGCACC+GGG + chr4_3:60257424-60257443 Msa0652520:intron 45.0%
!! GTGTTTCTCAGGTTTTGGTG+AGG + chr4_3:60257550-60257569 Msa0652520:intron 45.0%
!! TAATAATAATAAAAATTAGA+AGG - chr4_3:60255810-60255829 None:intergenic 5.0%
AACCCCTCCTCTCTCTTCAA+TGG + chr4_3:60247583-60247602 Msa0652520:intron 50.0%
GACCATTGAAGAGAGAGGAG+GGG - chr4_3:60247588-60247607 None:intergenic 50.0%
GAGACCATTGAAGAGAGAGG+AGG - chr4_3:60247590-60247609 None:intergenic 50.0%
! TTTGGGTTCCATCTTGGCCT+TGG - chr4_3:60248156-60248175 None:intergenic 50.0%
!! TCAGGCTTTGGGTTCCATCT+TGG - chr4_3:60248162-60248181 None:intergenic 50.0%
! TGCGGATTTGCTCAGGCTTT+GGG - chr4_3:60248173-60248192 None:intergenic 50.0%
! ATGCGGATTTGCTCAGGCTT+TGG - chr4_3:60248174-60248193 None:intergenic 50.0%
! TCCAGAATGCGGATTTGCTC+AGG - chr4_3:60248180-60248199 None:intergenic 50.0%
GGGAGAGAGTTATTAGGAGC+TGG - chr4_3:60248390-60248409 None:intergenic 50.0%
!! ATGGATTAGGTGGTGGTGGT+GGG - chr4_3:60248419-60248438 None:intergenic 50.0%
!! GAAGATGGATTAGGTGGTGG+TGG - chr4_3:60248423-60248442 None:intergenic 50.0%
TTTCACTGGGAGAGGCTCTT+TGG - chr4_3:60248464-60248483 None:intergenic 50.0%
TGATCTTGCTCCTCTACCTC+CGG + chr4_3:60248950-60248969 Msa0652520:CDS 50.0%
AGCAGGTGCACTCATGTCAA+TGG - chr4_3:60248976-60248995 None:intergenic 50.0%
GTTTGACTCCTTCTGTACCC+CGG + chr4_3:60249326-60249345 Msa0652520:CDS 50.0%
! CCATTCATCGGTTAGAACCG+GGG - chr4_3:60249346-60249365 None:intergenic 50.0%
! CCCATTCATCGGTTAGAACC+GGG - chr4_3:60249347-60249366 None:intergenic 50.0%
! CCCGGTTCTAACCGATGAAT+GGG + chr4_3:60249344-60249363 Msa0652520:CDS 50.0%
! CCCCATTCATCGGTTAGAAC+CGG - chr4_3:60249348-60249367 None:intergenic 50.0%
! CCGGTTCTAACCGATGAATG+GGG + chr4_3:60249345-60249364 Msa0652520:CDS 50.0%
ACCCTCAACTCACTCTACCA+TGG + chr4_3:60249372-60249391 Msa0652520:CDS 50.0%
CTCCATGGTAGAGTGAGTTG+AGG - chr4_3:60249377-60249396 None:intergenic 50.0%
!! GAGGAGATAATGGAACGGCT+AGG + chr4_3:60250898-60250917 Msa0652520:intron 50.0%
CAGTTGCTGAACTTCAGAGG+AGG + chr4_3:60251201-60251220 Msa0652520:intron 50.0%
AACTTCAGAGGAGGATACGG+AGG + chr4_3:60251210-60251229 Msa0652520:intron 50.0%
ACTTCAGAGGAGGATACGGA+GGG + chr4_3:60251211-60251230 Msa0652520:intron 50.0%
GGGTTACATTAAGGGACGGA+GGG - chr4_3:60251687-60251706 None:intergenic 50.0%
AGGGGGGTTACATTAAGGGA+CGG - chr4_3:60251691-60251710 None:intergenic 50.0%
TGGTACACTTGGACCCATGA+TGG - chr4_3:60252850-60252869 None:intergenic 50.0%
GGATGTCAAGAGGTCTGCAA+AGG + chr4_3:60253197-60253216 Msa0652520:intron 50.0%
CAAGAGGTCTGCAAAGGACA+TGG + chr4_3:60253203-60253222 Msa0652520:intron 50.0%
!! AATGGCGGATGACATTTGCG+AGG + chr4_3:60253238-60253257 Msa0652520:intron 50.0%
! TCTAGCTGGTGTTAGGGATG+TGG - chr4_3:60253284-60253303 None:intergenic 50.0%
TCATGATGCCCAGCATGCAT+AGG - chr4_3:60253355-60253374 None:intergenic 50.0%
TGTTAGGCGACAAGCCAATG+AGG - chr4_3:60253989-60254008 None:intergenic 50.0%
GTTGATGTGCGTGAAGCTCT+TGG - chr4_3:60254192-60254211 None:intergenic 50.0%
TGCCAATACCTCTTCGGTTG+AGG + chr4_3:60254280-60254299 Msa0652520:intron 50.0%
GCCAATACCTCTTCGGTTGA+GGG + chr4_3:60254281-60254300 Msa0652520:intron 50.0%
! TCCCTCAACCGAAGAGGTAT+TGG - chr4_3:60254285-60254304 None:intergenic 50.0%
AATACCTCTTCGGTTGAGGG+AGG + chr4_3:60254284-60254303 Msa0652520:intron 50.0%
TTATATCTCCCCGCCATAGG+AGG + chr4_3:60254333-60254352 Msa0652520:intron 50.0%
CCTCACCTAATGGTCGAAAG+TGG - chr4_3:60254362-60254381 None:intergenic 50.0%
CCACTTTCGACCATTAGGTG+AGG + chr4_3:60254359-60254378 Msa0652520:intron 50.0%
! AGTCGTCATTGCCACTTGAG+GGG - chr4_3:60254402-60254421 None:intergenic 50.0%
! CAGTCGTCATTGCCACTTGA+GGG - chr4_3:60254403-60254422 None:intergenic 50.0%
TCATTCCACCACCATAGTGC+TGG + chr4_3:60254494-60254513 Msa0652520:intron 50.0%
AGAAACCAGCACTATGGTGG+TGG - chr4_3:60254502-60254521 None:intergenic 50.0%
CACAGAAACCAGCACTATGG+TGG - chr4_3:60254505-60254524 None:intergenic 50.0%
TTCATGATCTGATGCGCAGC+TGG + chr4_3:60254743-60254762 Msa0652520:intron 50.0%
AGTAGAAAATGGGAGGGTGG+AGG - chr4_3:60255086-60255105 None:intergenic 50.0%
ACGAGTAGAAAATGGGAGGG+TGG - chr4_3:60255089-60255108 None:intergenic 50.0%
CTCCCCTCTTCTCTCTTCAA+TGG + chr4_3:60255771-60255790 Msa0652520:intron 50.0%
! TTTGGGATCCATCTTGGCCT+TGG - chr4_3:60256371-60256390 None:intergenic 50.0%
!! TCAGGCTTTGGGATCCATCT+TGG - chr4_3:60256377-60256396 None:intergenic 50.0%
! TGCGGATTTGCTCAGGCTTT+GGG - chr4_3:60248173-60248192 None:intergenic 50.0%
! ATGCGGATTTGCTCAGGCTT+TGG - chr4_3:60248174-60248193 None:intergenic 50.0%
! GTGGTGGTGTGGTGATTTGT+GGG - chr4_3:60256619-60256638 None:intergenic 50.0%
! AGTGGTGGTGTGGTGATTTG+TGG - chr4_3:60256620-60256639 None:intergenic 50.0%
! AGATGAGTTGAGTGGTGGTG+TGG - chr4_3:60256630-60256649 None:intergenic 50.0%
TCTCTGAGCCAAAACCAAGG+TGG + chr4_3:60256728-60256747 Msa0652520:CDS 50.0%
ACTTATCCTCACACCCTCAC+TGG + chr4_3:60256752-60256771 Msa0652520:CDS 50.0%
! TTGTAGACCGGTTCCAGTGA+GGG - chr4_3:60256768-60256787 None:intergenic 50.0%
GGGTGTAGGTAGTTGTAGAC+CGG - chr4_3:60256780-60256799 None:intergenic 50.0%
! ACCCTCGTTTTCCTCTTTCC+CGG + chr4_3:60256796-60256815 Msa0652520:intron 50.0%
ACCGGGAAAGAGGAAAACGA+GGG - chr4_3:60256800-60256819 None:intergenic 50.0%
AACCGGGAAAGAGGAAAACG+AGG - chr4_3:60256801-60256820 None:intergenic 50.0%
CACTATTGTCAATGGCCGGA+GGG - chr4_3:60257126-60257145 None:intergenic 50.0%
GGTGCACTATTGTCAATGGC+CGG - chr4_3:60257130-60257149 None:intergenic 50.0%
!! TCAGGTTTTGGTGAGGACGA+TGG + chr4_3:60257557-60257576 Msa0652520:intron 50.0%
GCAGTTCTACTTGACTCCTC+CGG + chr4_3:60257668-60257687 Msa0652520:CDS 50.0%
GGAAATAATCAGCCCCATGG+TGG - chr4_3:60257739-60257758 None:intergenic 50.0%
CCAGGAAATAATCAGCCCCA+TGG - chr4_3:60257742-60257761 None:intergenic 50.0%
CCATGGGGCTGATTATTTCC+TGG + chr4_3:60257739-60257758 Msa0652520:CDS 50.0%
ATCCTGGACCAAGGCCAAGA+TGG + chr4_3:60248145-60248164 Msa0652520:CDS 55.0%
!! TTCCATCTTGGCCTTGGTCC+AGG - chr4_3:60248150-60248169 None:intergenic 55.0%
GCCTGAGCAAATCCGCATTC+TGG + chr4_3:60248176-60248195 Msa0652520:CDS 55.0%
!! GTGGTGGTGGTGGGATTTGT+GGG - chr4_3:60248410-60248429 None:intergenic 55.0%
!! GATGGATTAGGTGGTGGTGG+TGG - chr4_3:60248420-60248439 None:intergenic 55.0%
ATGTCAATGGCCGGAGGTAG+AGG - chr4_3:60248963-60248982 None:intergenic 55.0%
GGTGCACTCATGTCAATGGC+CGG - chr4_3:60248972-60248991 None:intergenic 55.0%
GGTTAGAACCGGGGTACAGA+AGG - chr4_3:60249337-60249356 None:intergenic 55.0%
! CCCCGGTTCTAACCGATGAA+TGG + chr4_3:60249343-60249362 Msa0652520:CDS 55.0%
GAGGGTGACACCCCATTCAT+CGG - chr4_3:60249358-60249377 None:intergenic 55.0%
GGGGTTACATTAAGGGACGG+AGG - chr4_3:60251688-60251707 None:intergenic 55.0%
GGACGGAGGGAGTAGATCTT+AGG + chr4_3:60251954-60251973 Msa0652520:intron 55.0%
GGAGCTTCTATGGTGCAGTC+AGG + chr4_3:60252254-60252273 Msa0652520:intron 55.0%
!! GCGCCATTGTCGTTTCTAGC+TGG - chr4_3:60253298-60253317 None:intergenic 55.0%
AAAGTGGCAGCCTCCTATGG+CGG - chr4_3:60254346-60254365 None:intergenic 55.0%
TCGAAAGTGGCAGCCTCCTA+TGG - chr4_3:60254349-60254368 None:intergenic 55.0%
!! GGCTGCCACTTTCGACCATT+AGG + chr4_3:60254354-60254373 Msa0652520:intron 55.0%
ACCATTAGGTGAGGCCGAAG+TGG + chr4_3:60254368-60254387 Msa0652520:intron 55.0%
TCCACTTCGGCCTCACCTAA+TGG - chr4_3:60254372-60254391 None:intergenic 55.0%
TTAGGTGAGGCCGAAGTGGA+AGG + chr4_3:60254372-60254391 Msa0652520:intron 55.0%
! TCGTCATTGCCACTTGAGGG+GGG - chr4_3:60254400-60254419 None:intergenic 55.0%
! GTCGTCATTGCCACTTGAGG+GGG - chr4_3:60254401-60254420 None:intergenic 55.0%
! CCAGTCGTCATTGCCACTTG+AGG - chr4_3:60254404-60254423 None:intergenic 55.0%
CCTCAAGTGGCAATGACGAC+TGG + chr4_3:60254401-60254420 Msa0652520:intron 55.0%
GGTGGAATGAGCCCGGAATA+TGG - chr4_3:60254484-60254503 None:intergenic 55.0%
!! CTATGGTGGTGGAATGAGCC+CGG - chr4_3:60254491-60254510 None:intergenic 55.0%
AGTGTGCGTGCTAGCAATGG+TGG - chr4_3:60255556-60255575 None:intergenic 55.0%
GCAAGTGTGCGTGCTAGCAA+TGG - chr4_3:60255559-60255578 None:intergenic 55.0%
!! ATCCATCTTGGCCTTGGTCC+AGG - chr4_3:60256365-60256384 None:intergenic 55.0%
! GTTGTAGACCGGTTCCAGTG+AGG - chr4_3:60256769-60256788 None:intergenic 55.0%
TGATCTTGCTCCTCTCCCTC+CGG + chr4_3:60257108-60257127 Msa0652520:intron 55.0%
GCACTATTGTCAATGGCCGG+AGG - chr4_3:60257127-60257146 None:intergenic 55.0%
ATCGGTTAGAACCGGGACAC+CGG - chr4_3:60257690-60257709 None:intergenic 55.0%
! TCCCGGTTCTAACCGATGAG+TGG + chr4_3:60257693-60257712 Msa0652520:CDS 55.0%
! CCCACTCATCGGTTAGAACC+GGG - chr4_3:60257697-60257716 None:intergenic 55.0%
! CCCGGTTCTAACCGATGAGT+GGG + chr4_3:60257694-60257713 Msa0652520:CDS 55.0%
! CCCCACTCATCGGTTAGAAC+CGG - chr4_3:60257698-60257717 None:intergenic 55.0%
! CCGGTTCTAACCGATGAGTG+GGG + chr4_3:60257695-60257714 Msa0652520:CDS 55.0%
ACCCTCAACTCACTCCACCA+TGG + chr4_3:60257722-60257741 Msa0652520:CDS 55.0%
! CCCATGGTGGAGTGAGTTGA+GGG - chr4_3:60257726-60257745 None:intergenic 55.0%
CCCTCAACTCACTCCACCAT+GGG + chr4_3:60257723-60257742 Msa0652520:CDS 55.0%
CCTCAACTCACTCCACCATG+GGG + chr4_3:60257724-60257743 Msa0652520:CDS 55.0%
!! GGTGGTGGTGGTGGGATTTG+TGG - chr4_3:60248411-60248430 None:intergenic 60.0%
GCACTCATGTCAATGGCCGG+AGG - chr4_3:60248969-60248988 None:intergenic 60.0%
AGCGGGACTACCTAGCAACG+TGG + chr4_3:60253939-60253958 Msa0652520:intron 60.0%
GCACGAGAAGCCACGTTGCT+AGG - chr4_3:60253952-60253971 None:intergenic 60.0%
ACCTCTTCGGTTGAGGGAGG+CGG + chr4_3:60254287-60254306 Msa0652520:intron 60.0%
GTTGAGGGAGGCGGAGAAAG+CGG + chr4_3:60254296-60254315 Msa0652520:intron 60.0%
AAGTGGCAGCCTCCTATGGC+GGG - chr4_3:60254345-60254364 None:intergenic 60.0%
! CGTCATTGCCACTTGAGGGG+GGG - chr4_3:60254399-60254418 None:intergenic 60.0%
TGATGCGCAGCTGGCGCAAT+TGG + chr4_3:60254752-60254771 Msa0652520:intron 60.0%
CTCCTGGACCAAGGCCAAGA+TGG + chr4_3:60256360-60256379 Msa0652520:CDS 60.0%
CCTCACACCCTCACTGGAAC+CGG + chr4_3:60256758-60256777 Msa0652520:CDS 60.0%
TTGTCAATGGCCGGAGGGAG+AGG - chr4_3:60257121-60257140 None:intergenic 60.0%
ACTTGACTCCTCCGGTGTCC+CGG + chr4_3:60257676-60257695 Msa0652520:CDS 60.0%
GAGGGTGACACCCCACTCAT+CGG - chr4_3:60257708-60257727 None:intergenic 60.0%
! CCCCATGGTGGAGTGAGTTG+AGG - chr4_3:60257727-60257746 None:intergenic 60.0%
TCCGCCTCCCTCAACCGAAG+AGG - chr4_3:60254291-60254310 None:intergenic 65.0%
AGTGGCAGCCTCCTATGGCG+GGG - chr4_3:60254344-60254363 None:intergenic 65.0%
GAGGGGGGGACCTTCCACTT+CGG - chr4_3:60254385-60254404 None:intergenic 65.0%
TGGAAGGTCCCCCCCTCAAG+TGG + chr4_3:60254388-60254407 Msa0652520:intron 65.0%
GCGCAGCTGGCGCAATTGGT+AGG + chr4_3:60254756-60254775 Msa0652520:intron 65.0%
! CCGGTTCCAGTGAGGGTGTG+AGG - chr4_3:60256761-60256780 None:intergenic 65.0%
GGTTAGAACCGGGACACCGG+AGG - chr4_3:60257687-60257706 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 60247429 60257778 60247429 ID=Msa0652520;Name=Msa0652520
chr4_3 mRNA 60247429 60257778 60247429 ID=Msa0652520-mRNA-1;Parent=Msa0652520;Name=Msa0652520-mRNA-1;_AED=0.13;_eAED=0.13;_QI=64|0|0|0.87|0.42|0.5|8|0|700
chr4_3 exon 60247429 60247580 60247429 ID=Msa0652520-mRNA-1:exon:16340;Parent=Msa0652520-mRNA-1
chr4_3 exon 60248124 60249032 60248124 ID=Msa0652520-mRNA-1:exon:16341;Parent=Msa0652520-mRNA-1
chr4_3 exon 60249211 60249410 60249211 ID=Msa0652520-mRNA-1:exon:16342;Parent=Msa0652520-mRNA-1
chr4_3 exon 60255697 60255703 60255697 ID=Msa0652520-mRNA-1:exon:16343;Parent=Msa0652520-mRNA-1
chr4_3 exon 60256339 60256537 60256339 ID=Msa0652520-mRNA-1:exon:16344;Parent=Msa0652520-mRNA-1
chr4_3 exon 60256544 60256779 60256544 ID=Msa0652520-mRNA-1:exon:16345;Parent=Msa0652520-mRNA-1
chr4_3 exon 60256846 60257088 60256846 ID=Msa0652520-mRNA-1:exon:16346;Parent=Msa0652520-mRNA-1
chr4_3 exon 60257561 60257778 60257561 ID=Msa0652520-mRNA-1:exon:16347;Parent=Msa0652520-mRNA-1
chr4_3 five_prime_UTR 60247429 60247492 60247429 ID=Msa0652520-mRNA-1:five_prime_utr;Parent=Msa0652520-mRNA-1
chr4_3 CDS 60247493 60247580 60247493 ID=Msa0652520-mRNA-1:cds;Parent=Msa0652520-mRNA-1
chr4_3 CDS 60248124 60249032 60248124 ID=Msa0652520-mRNA-1:cds;Parent=Msa0652520-mRNA-1
chr4_3 CDS 60249211 60249410 60249211 ID=Msa0652520-mRNA-1:cds;Parent=Msa0652520-mRNA-1
chr4_3 CDS 60255697 60255703 60255697 ID=Msa0652520-mRNA-1:cds;Parent=Msa0652520-mRNA-1
chr4_3 CDS 60256339 60256537 60256339 ID=Msa0652520-mRNA-1:cds;Parent=Msa0652520-mRNA-1
chr4_3 CDS 60256544 60256779 60256544 ID=Msa0652520-mRNA-1:cds;Parent=Msa0652520-mRNA-1
chr4_3 CDS 60256846 60257088 60256846 ID=Msa0652520-mRNA-1:cds;Parent=Msa0652520-mRNA-1
chr4_3 CDS 60257561 60257778 60257561 ID=Msa0652520-mRNA-1:cds;Parent=Msa0652520-mRNA-1
Gene Sequence

>Msa0652520

ATGGCTCGTAAGAAGAAAGTACATTGGCCAAGCAAGTTTATAAAGTCACCAAATTCGTCGAACTCCAACCATCAAAATCGTCTGCATGGTGGAGATAATGAAGAAAGAAATCCTGGACCAAGGCCAAGATGGAACCCAAAGCCTGAGCAAATCCGCATTCTGGAAGCAATCTACAACTCAGGGATGAAGAATCCACCTGTAGATGAAATCAAGAAGATACGTGAACAATTAGAAGAATTTGGGAAAATTGGTGATTCGAGTGTCTTTTACTGGTTTCAAAACCGCAAGTCCAAAGGCAAAAACAAAAAAGCACCCTACCCCAAGAAATCAAAAAGACAACCAATTGCAGATCCAGCTCCTAATAACTCTCTCCCACAAATCCCACCACCACCACCTAATCCATCTTCATCATCTTCCTCTAATCACCAAAGAGCCTCTCCCAGTGAAATCACAATATCTAACAATATTGGAATCTCCAATATTAATGATGGGAGAGTGTTGGTGCCTAATTCATCCACAATCTCTCCGAACCAAAAGCAAGATGATACTTATTCTCACACCCCAACTGAAACCGATCTACAACTACCTAAAACCCTATTTTCCTCTTTCTCAATGGAGAATCATGTTAATGAAGGGGTAGTGCTTAATGACATGACAACACTAGAGGGGTTTAATTACTTCTCTGATTTCCCGAATATGATTGAACCCTCACCTCAACAAAATGTTGATCTTCCTGTGCTTAATTATGATAACATCATGAACAATGAAAATGAAAATGGAATCTGCTCAACCAATGATCTTTTTGATCAAGTGAATGTTCAAGAGGAAGCCATGAATATGATGCACATGCACCAACAAGACCCGCAATTTAATTTTGGTGTCACAACAACATCAAGTAATGATGATCATTCAACTGATCTTGCTCCTCTACCTCCGGCCATTGACATGAGTGCACCTGCTGATATTCCATTCCTTTTTACTGATGATCAACTTCAAGGTTTTGGTGAGGAAGATGGTCTGAGAAAATGTAGAATTTTTACTGCCAACGAAGTAATCGAGGTTAACGCAGGGCCCTTTAACGTTCGTGAATCCTTTGGTAATAGAGCAGTTCTGTTTGACTCCTTCTGTACCCCGGTTCTAACCGATGAATGGGGTGTCACCCTCAACTCACTCTACCATGGAGCTGATTATTACGTGTACATTGGTGGAGATGATGAAGAAAGAACTCCTGGACCAAGGCCAAGATGGATCCCAAAGCCTGAGCAAATCCGCATTCTCAAAGCCATCTATAACTCAGGGATGACGAATCCACGTAGAGATGAGATTAAGAAGATACGTGGACAATTAGAAGAATTTGGACCGATTGGTGATTCCAGCGTCTTTTATTGGTTTCAAAATCGCAAAAGCAAAACCAACAAAGTACCCTATAACAAGAAACAGGAAACACAACAAAACGCAGCTCCAGATAGCTCTCTCCCACAAATCACCACACCACCACTCAACTCATCTTCATCATCTTCCTCTAACAATATTGGAATCTCCAATATTAATGATGGGACGGTGATGGTGCCTAATTCACCTGCAATCTCTCTGAGCCAAAACCAAGGTGGTACTTATCCTCACACCCTCACTGGAACCGTGCTTAATGACATGATAAGGCCAGAGGGGTTTAATTACTTCTCTGATTTTCCAAATATGAGTCAATCCCTACCTCAAGAAAATGTTGATCTGCTTAATTATGATAACATCATGACCTATGGAAATGGAAACTGCTCAATCGATGACCTTTTTTATCAAGAGAATATTCAAGAGGAGTCGATTAATATGATGCATATGCACCAACAAGACCCACAACTTAATTTTGGTGTCACGACAGCTTCAAGTTTTGGTGAGGACGATGGTACAGCAAAATGTAGGGTGATTACTATCAACGGTACATTCAAAGTTAATGCAGGGCCTTTTAACGTTCGTAAATTCTTTGGCGATGGAGCAGTTCTACTTGACTCCTCCGGTGTCCCGGTTCTAACCGATGAGTGGGGTGTCACCCTCAACTCACTCCACCATGGGGCTGATTATTTCCTGGTCTGCAATTTTTTCTTA
Protein sequence

>Msa0652520

MARKKKVHWPSKFIKSPNSSNSNHQNRLHGGDNEERNPGPRPRWNPKPEQIRILEAIYNSGMKNPPVDEIKKIREQLEEFGKIGDSSVFYWFQNRKSKGKNKKAPYPKKSKRQPIADPAPNNSLPQIPPPPPNPSSSSSSNHQRASPSEITISNNIGISNINDGRVLVPNSSTISPNQKQDDTYSHTPTETDLQLPKTLFSSFSMENHVNEGVVLNDMTTLEGFNYFSDFPNMIEPSPQQNVDLPVLNYDNIMNNENENGICSTNDLFDQVNVQEEAMNMMHMHQQDPQFNFGVTTTSSNDDHSTDLAPLPPAIDMSAPADIPFLFTDDQLQGFGEEDGLRKCRIFTANEVIEVNAGPFNVRESFGNRAVLFDSFCTPVLTDEWGVTLNSLYHGADYYVYIGGDDEERTPGPRPRWIPKPEQIRILKAIYNSGMTNPRRDEIKKIRGQLEEFGPIGDSSVFYWFQNRKSKTNKVPYNKKQETQQNAAPDSSLPQITTPPLNSSSSSSSNNIGISNINDGTVMVPNSPAISLSQNQGGTYPHTLTGTVLNDMIRPEGFNYFSDFPNMSQSLPQENVDLLNYDNIMTYGNGNCSIDDLFYQENIQEESINMMHMHQQDPQLNFGVTTASSFGEDDGTAKCRVITINGTFKVNAGPFNVRKFFGDGAVLLDSSGVPVLTDEWGVTLNSLHHGADYFLVCNFFL