AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0654800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0654800 MtrunA17_Chr4g0052011 97.368 152 3 1 1 151 1 152 1.46e-104 295
Msa0654800 MtrunA17_Chr8g0370431 46.067 89 48 0 59 147 33 121 8.22e-24 90.5
Msa0654800 MtrunA17_Chr3g0143991 47.674 86 45 0 53 138 35 120 2.42e-23 89.4
Msa0654800 MtrunA17_Chr7g0242251 51.316 76 37 0 59 134 47 122 1.47e-22 87.8
Msa0654800 MtrunA17_Chr1g0212341 48.315 89 45 1 59 146 98 186 8.54e-22 87.0
Msa0654800 MtrunA17_Chr5g0407011 38.272 81 50 0 52 132 25 105 3.55e-15 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0654800 AT2G34450.4 55.921 152 65 2 1 151 1 151 5.11e-51 160
Msa0654800 AT2G34450.3 55.921 152 65 2 1 151 1 151 5.11e-51 160
Msa0654800 AT2G34450.1 55.921 152 65 2 1 151 1 151 5.11e-51 160
Msa0654800 AT2G34450.2 55.556 153 65 3 1 151 1 152 3.43e-49 155
Msa0654800 AT2G17560.3 43.478 115 61 1 41 151 13 127 8.71e-24 90.5
Msa0654800 AT2G17560.2 43.478 115 61 1 41 151 13 127 9.27e-24 90.5
Msa0654800 AT2G17560.1 43.478 115 61 1 41 151 13 127 9.27e-24 90.5
Msa0654800 AT3G51880.4 44.554 101 56 0 50 150 40 140 1.65e-23 90.5
Msa0654800 AT3G51880.5 44.118 102 57 0 50 151 40 141 2.13e-23 90.5
Msa0654800 AT3G51880.1 44.118 102 57 0 50 151 40 141 2.13e-23 90.5
Msa0654800 AT3G51880.3 44.118 102 57 0 50 151 40 141 2.13e-23 90.5
Msa0654800 AT3G51880.2 44.118 102 57 0 50 151 40 141 2.33e-23 90.9
Msa0654800 AT1G20693.3 46.667 90 46 1 59 148 34 121 5.19e-22 86.3
Msa0654800 AT1G20693.1 46.667 90 46 1 59 148 34 121 5.32e-22 86.3
Msa0654800 AT4G35570.1 44.318 88 49 0 59 146 30 117 5.77e-22 85.5
Msa0654800 AT4G35570.2 44.318 88 49 0 59 146 30 117 5.77e-22 85.5
Msa0654800 AT1G20693.2 46.667 90 46 1 59 148 34 121 1.22e-21 85.1
Msa0654800 AT1G20696.1 45.556 90 47 1 59 148 31 118 8.03e-21 82.8
Msa0654800 AT1G20696.2 44.156 77 43 0 59 135 31 107 5.12e-18 75.9
Msa0654800 AT1G20696.5 44.156 77 43 0 59 135 31 107 5.38e-18 75.5
Msa0654800 AT5G23420.1 47.059 68 35 1 60 127 112 178 6.51e-13 64.3
Msa0654800 AT1G20696.4 43.243 74 40 1 75 148 5 76 4.74e-12 59.3
Msa0654800 AT1G20696.3 43.243 74 40 1 75 148 5 76 1.29e-11 58.2

Find 53 sgRNAs with CRISPR-Local

Find 587 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGCCACCCTTGTTGTTAA+AGG 0.206436 4_3:+63167790 None:intergenic
GATACTTAAAATTGCAGTTT+TGG 0.217185 4_3:-63159543 Msa0654800:three_prime_UTR
CTGATTCCCAGTTTGGTAAA+AGG 0.243767 4_3:+63159486 None:intergenic
AGTTGTATATATATGCTTAA+TGG 0.266062 4_3:+63167924 None:intergenic
AATGAGGCTGATTTCAAAAC+TGG 0.309626 4_3:-63167758 Msa0654800:five_prime_UTR
TCTTCTTCGGCCTCCACCTC+CGG 0.314496 4_3:-63162618 Msa0654800:CDS
GAAGACCCTGATTCCCAGTT+TGG 0.344102 4_3:+63159479 None:intergenic
GGTTTATTGAGGAATATCTT+TGG 0.347041 4_3:-63167848 Msa0654800:five_prime_UTR
TTTCAGACAGGTGTGGTTGC+AGG 0.349092 4_3:-63162704 Msa0654800:five_prime_UTR
AACAGAGTATAACAAGAAAA+TGG 0.350035 4_3:-63159871 Msa0654800:intron
ACAACTGAATATACAACTTA+AGG 0.407822 4_3:+63159644 None:intergenic
TCAAAAGAACGCTTCTTCTT+CGG 0.408803 4_3:-63162631 Msa0654800:CDS
TATTCAGTTGTAGTCAGCTC+TGG 0.411578 4_3:-63159632 Msa0654800:three_prime_UTR
TCACGCATTGACTTAACATC+TGG 0.420177 4_3:+63161242 None:intergenic
TATTAAGTAAACTGAATAGA+AGG 0.421794 4_3:-63159513 Msa0654800:three_prime_UTR
TCTATTATTATAAGATAAGA+TGG 0.457896 4_3:-63167873 Msa0654800:five_prime_UTR
CTTCTTCGGCCTCCACCTCC+GGG 0.468963 4_3:-63162617 Msa0654800:intron
AGTGAAAGGGTACCCGGAGG+TGG 0.487598 4_3:+63162605 None:intergenic
TTATTATAAGATAAGATGGC+TGG 0.493761 4_3:-63167869 Msa0654800:five_prime_UTR
TTTAAGTATCTAACTAACAT+AGG 0.495752 4_3:+63159556 None:intergenic
TTCAGACAGGTGTGGTTGCA+GGG 0.498244 4_3:-63162703 Msa0654800:five_prime_UTR
ATAAGATGGCTGGTTTATTG+AGG 0.498673 4_3:-63167859 Msa0654800:five_prime_UTR
CGAGTAGTTTCAATTAACAT+AGG 0.500098 4_3:+63159671 None:intergenic
CCTGTCTGAAATGTGAATAA+TGG 0.509270 4_3:+63162716 None:intergenic
GAAAGGGTACCCGGAGGTGG+AGG 0.521126 4_3:+63162608 None:intergenic
CCATTATTCACATTTCAGAC+AGG 0.540239 4_3:-63162716 Msa0654800:five_prime_UTR
GCAAGGCATGCGGAGAGAAG+TGG 0.547557 4_3:-63160951 Msa0654800:CDS
TTGAACGACGGTGGAAACAA+TGG 0.559588 4_3:-63167824 Msa0654800:five_prime_UTR
ATCTTTGGTTTGAACGACGG+TGG 0.565216 4_3:-63167833 Msa0654800:five_prime_UTR
AAGAAGTAGAAGAAAGCAGT+GGG 0.576065 4_3:+63161962 None:intergenic
CTGGAGCAAAAGTTACCAAA+GGG 0.577200 4_3:-63167739 Msa0654800:intron
GTTGGCGATCAAATCGAATG+AGG 0.587280 4_3:-63162086 Msa0654800:CDS
GAAGTAGAAGAAAGCAGTGG+GGG 0.593069 4_3:+63161964 None:intergenic
AATATCTTTGGTTTGAACGA+CGG 0.596826 4_3:-63167836 Msa0654800:five_prime_UTR
TCTGATGCTTTGCAGGAAAG+CGG 0.606454 4_3:-63159776 Msa0654800:intron
AATTGATGCCTTTAACAACA+AGG 0.607339 4_3:-63167798 Msa0654800:five_prime_UTR
TGATAGTTGAGAAGCACCAA+TGG 0.611816 4_3:-63162679 Msa0654800:exon
CAAGAAAATGAATAAACCGA+TGG 0.612518 4_3:+63159708 None:intergenic
ACTGGAGCAAAAGTTACCAA+AGG 0.623647 4_3:-63167740 Msa0654800:five_prime_UTR
ATTCACATTTCAGACAGGTG+TGG 0.626283 4_3:-63162711 Msa0654800:five_prime_UTR
ATACAGATCGGCAAGGCATG+CGG 0.626292 4_3:-63160961 Msa0654800:intron
TGAGTATGAAGAAACTGATG+AGG 0.628456 4_3:-63159753 Msa0654800:CDS
TTGGCGATCAAATCGAATGA+GGG 0.633911 4_3:-63162085 Msa0654800:CDS
CAAGAAGTAGAAGAAAGCAG+TGG 0.644048 4_3:+63161961 None:intergenic
ATTGATGCCTTTAACAACAA+GGG 0.648530 4_3:-63167797 Msa0654800:five_prime_UTR
GATGCCTTTAACAACAAGGG+TGG 0.656967 4_3:-63167794 Msa0654800:five_prime_UTR
TGTGTTCATACAGATCGGCA+AGG 0.661731 4_3:-63160968 Msa0654800:intron
ATGTTAATTGAAACTACTCG+AGG 0.664773 4_3:-63159668 Msa0654800:three_prime_UTR
AAGTAGAAGAAAGCAGTGGG+GGG 0.691336 4_3:+63161965 None:intergenic
AGTATGACGAGTAAAACCAT+CGG 0.707925 4_3:-63159724 Msa0654800:exon
AGGGAATGAAGAGATCGTTG+CGG 0.720017 4_3:-63162066 Msa0654800:CDS
AGAAGTAGAAGAAAGCAGTG+GGG 0.730489 4_3:+63161963 None:intergenic
TGGCGAACAAGATTTCAATG+AGG 0.743433 4_3:-63167774 Msa0654800:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTGAGTAAAAATTA+AGG + chr4_3:63164157-63164176 None:intergenic 10.0%
!! ATTCAAGTAAAAAAAATTAT+TGG - chr4_3:63165049-63165068 Msa0654800:intron 10.0%
!! AATACATTATTAATTTAACA+AGG - chr4_3:63165572-63165591 Msa0654800:intron 10.0%
!! ATACATTATTAATTTAACAA+GGG - chr4_3:63165573-63165592 Msa0654800:intron 10.0%
!! ATAAATTAAGTTTCAAAAAT+TGG - chr4_3:63166578-63166597 Msa0654800:intron 10.0%
!! ATAAATTATGTTTCAAAAAT+TGG - chr4_3:63166653-63166672 Msa0654800:intron 10.0%
!! TTGTTATATTTGAAAAAAAT+TGG - chr4_3:63166809-63166828 Msa0654800:intron 10.0%
!! TAAAAAAAATTAAAGAAAAG+GGG - chr4_3:63167168-63167187 Msa0654800:intron 10.0%
!! TCTATTATTATAAGATAAGA+TGG - chr4_3:63159524-63159543 Msa0654800:three_prime_UTR 15.0%
!! ATATGAAATAATAATGAAAC+TGG - chr4_3:63159928-63159947 Msa0654800:CDS 15.0%
!! TTAATAGAAAGAAAAAAAAG+TGG - chr4_3:63163829-63163848 Msa0654800:intron 15.0%
!!! GGATTTTAAGATATATTTTT+AGG - chr4_3:63164062-63164081 Msa0654800:intron 15.0%
!!! AAATACATATTTTATACTCT+TGG - chr4_3:63164190-63164209 Msa0654800:intron 15.0%
!!! AATTGATTTTTAGAAGATTT+AGG - chr4_3:63165020-63165039 Msa0654800:intron 15.0%
!!! ATTGATTTTTAGAAGATTTA+GGG - chr4_3:63165021-63165040 Msa0654800:intron 15.0%
!!! TAATTTTTTTTACTTGAATG+AGG + chr4_3:63165048-63165067 None:intergenic 15.0%
!! ACTACTATTTACAATATATT+TGG - chr4_3:63165977-63165996 Msa0654800:intron 15.0%
!!! CGATTTTTATGTTTAATTAT+TGG - chr4_3:63167014-63167033 Msa0654800:intron 15.0%
!! AAAAATGATAATTATTCACA+AGG + chr4_3:63167796-63167815 None:intergenic 15.0%
!! AGTTGTATATATATGCTTAA+TGG + chr4_3:63159476-63159495 None:intergenic 20.0%
!! TATTTAATCAATGTTGTAGT+TGG - chr4_3:63161045-63161064 Msa0654800:intron 20.0%
!!! ATCTATTTTAGATAATGCTA+TGG - chr4_3:63161277-63161296 Msa0654800:CDS 20.0%
!! ATTTCATTAAATATCGAATC+TGG - chr4_3:63161942-63161961 Msa0654800:intron 20.0%
!! AATAAACTCATAAAATAGGT+TGG + chr4_3:63162049-63162068 None:intergenic 20.0%
!! TGTGAATAAACTCATAAAAT+AGG + chr4_3:63162053-63162072 None:intergenic 20.0%
!!! AAAAGATGATGAATTCTTTT+TGG - chr4_3:63162101-63162120 Msa0654800:intron 20.0%
!!! CAGATTAGATTTTTAATCTT+GGG + chr4_3:63162793-63162812 None:intergenic 20.0%
!! CCATAAAATACAACAAAATA+AGG + chr4_3:63163067-63163086 None:intergenic 20.0%
!!! CCTTATTTTGTTGTATTTTA+TGG - chr4_3:63163064-63163083 Msa0654800:intron 20.0%
!! AATATGTGTTCAATACAATA+TGG + chr4_3:63163690-63163709 None:intergenic 20.0%
!!! TAAGACATTTTTTTTTTGAG+AGG + chr4_3:63163739-63163758 None:intergenic 20.0%
!!! GTTAATTTCGGTTTTTTATT+AGG + chr4_3:63164222-63164241 None:intergenic 20.0%
!!! TTTTATTAAGCTCAATCATT+TGG + chr4_3:63164244-63164263 None:intergenic 20.0%
!!! TGCTAAGAATTATTTTCATA+AGG + chr4_3:63164400-63164419 None:intergenic 20.0%
!! TATGAAAATAATTCTTAGCA+AGG - chr4_3:63164400-63164419 Msa0654800:intron 20.0%
!! AATAAGCAGAAAACAATTTA+TGG + chr4_3:63164912-63164931 None:intergenic 20.0%
!!! TTTTATTTTCATAAGCTCTT+CGG - chr4_3:63164993-63165012 Msa0654800:intron 20.0%
!!! CCATCATTTTATTCAATTTT+GGG + chr4_3:63165141-63165160 None:intergenic 20.0%
!! AAAATTGAATAAAATGATGG+CGG - chr4_3:63165141-63165160 Msa0654800:intron 20.0%
!!! CCATAAAAATTTAGAACAAA+TGG + chr4_3:63165552-63165571 None:intergenic 20.0%
!!! CCATTTGTTCTAAATTTTTA+TGG - chr4_3:63165549-63165568 Msa0654800:intron 20.0%
!!! ACAATTGCTTCTTTTTTAAA+TGG - chr4_3:63166039-63166058 Msa0654800:intron 20.0%
!!! AAGTTTTTTTTCATTCTGAA+GGG - chr4_3:63166100-63166119 Msa0654800:intron 20.0%
!!! ATAACTGGCAATTTTTAAAA+TGG + chr4_3:63166316-63166335 None:intergenic 20.0%
!! TCTCAAAAACATAAAATAAC+TGG + chr4_3:63166331-63166350 None:intergenic 20.0%
!! TTTGAAAAAAATTGGAAAGT+TGG - chr4_3:63166817-63166836 Msa0654800:intron 20.0%
!! TTATGTTTAATTATTGGTGT+TGG - chr4_3:63167020-63167039 Msa0654800:intron 20.0%
!!! AAACTAGTTCTATATTGATT+TGG + chr4_3:63167313-63167332 None:intergenic 20.0%
!! AGATCAAATTGAACATAATA+TGG + chr4_3:63167387-63167406 None:intergenic 20.0%
!!! TATTCATTTTCTTGTTTACA+AGG - chr4_3:63167698-63167717 Msa0654800:intron 20.0%
!! TTTAAGTATCTAACTAACAT+AGG + chr4_3:63167844-63167863 None:intergenic 20.0%
!!! ATACTTAAAATTGCAGTTTT+GGG - chr4_3:63167855-63167874 Msa0654800:five_prime_UTR 20.0%
!! TATTAAGTAAACTGAATAGA+AGG - chr4_3:63167884-63167903 Msa0654800:five_prime_UTR 20.0%
! TTATTATAAGATAAGATGGC+TGG - chr4_3:63159528-63159547 Msa0654800:three_prime_UTR 25.0%
! TTGTAATTTCTGTGTGTATA+TGG - chr4_3:63159881-63159900 Msa0654800:CDS 25.0%
!! ATAATGAAACTGGTAATGTT+TGG - chr4_3:63159938-63159957 Msa0654800:intron 25.0%
! GAATATCATTAAAATCACCT+AGG + chr4_3:63160047-63160066 None:intergenic 25.0%
!!! AGTTCAAGTTTTTCAGAAAT+AGG + chr4_3:63160456-63160475 None:intergenic 25.0%
! TTGAACTCTTCAATAACAAA+AGG + chr4_3:63160927-63160946 None:intergenic 25.0%
! TTGTCGAATTTAATGAAGAA+GGG + chr4_3:63161088-63161107 None:intergenic 25.0%
! TTTGTCGAATTTAATGAAGA+AGG + chr4_3:63161089-63161108 None:intergenic 25.0%
!! TTATCTAAAATAGATCTTCC+TGG + chr4_3:63161272-63161291 None:intergenic 25.0%
! TCGAAAGTTAAAGGTAAAAT+TGG - chr4_3:63161329-63161348 Msa0654800:intron 25.0%
!! TTTGAAGCTTGATATTAGTA+AGG - chr4_3:63161361-63161380 Msa0654800:intron 25.0%
! GCACAAATAATAAACAGATA+CGG + chr4_3:63161569-63161588 None:intergenic 25.0%
! TGTTTATTATTTGTGCAGAA+GGG - chr4_3:63161573-63161592 Msa0654800:intron 25.0%
! TATTCTATCTGTTTATGAGA+AGG - chr4_3:63161748-63161767 Msa0654800:intron 25.0%
! GAGTAGTAAATGTTTATCTA+AGG - chr4_3:63161982-63162001 Msa0654800:CDS 25.0%
! TTAGCAATGCATAAAAATGA+TGG - chr4_3:63162178-63162197 Msa0654800:intron 25.0%
!! ATTTTTGCAATAAGACTATC+AGG + chr4_3:63162280-63162299 None:intergenic 25.0%
! TCTAAATTCATTCTTAAAGC+TGG - chr4_3:63162388-63162407 Msa0654800:intron 25.0%
! ATCCAATAATTATTCCAAAC+CGG + chr4_3:63162448-63162467 None:intergenic 25.0%
! TTGGAATAATTATTGGATGA+AGG - chr4_3:63162450-63162469 Msa0654800:intron 25.0%
! ATTTGGAAAAAGGAAAATGA+TGG - chr4_3:63162658-63162677 Msa0654800:CDS 25.0%
!! ATTAGATTTTTAATCTTGGG+CGG + chr4_3:63162790-63162809 None:intergenic 25.0%
!! CCAGATTAGATTTTTAATCT+TGG + chr4_3:63162794-63162813 None:intergenic 25.0%
! CCAAGATTAAAAATCTAATC+TGG - chr4_3:63162791-63162810 Msa0654800:intron 25.0%
! TTCCAAATATTCATGCTATT+AGG + chr4_3:63162940-63162959 None:intergenic 25.0%
!!! TGTTATTTTTAACTCTCTTC+AGG - chr4_3:63163020-63163039 Msa0654800:intron 25.0%
!!! TTTTTCTAAAGCTTCAAACA+TGG - chr4_3:63163293-63163312 Msa0654800:intron 25.0%
! TGGGTGCATAATTTAAATTT+AGG - chr4_3:63163438-63163457 Msa0654800:intron 25.0%
!! GCATAATTTAAATTTAGGAC+CGG - chr4_3:63163443-63163462 Msa0654800:intron 25.0%
! AAAAAAAAGTGGAAAAACGT+TGG - chr4_3:63163840-63163859 Msa0654800:intron 25.0%
! ACTTCTTATACTTTCTTCTT+TGG + chr4_3:63163963-63163982 None:intergenic 25.0%
!!! TTTGTTTTATCTCTTTGAGA+TGG + chr4_3:63163993-63164012 None:intergenic 25.0%
!! TCAAAACTATTTTATACACC+CGG - chr4_3:63164104-63164123 Msa0654800:intron 25.0%
! CTCAATCATTTGGTTAATTT+CGG + chr4_3:63164234-63164253 None:intergenic 25.0%
! AATCATTTGAACTCAATACA+TGG + chr4_3:63164280-63164299 None:intergenic 25.0%
! ATGATTAATGAACTTTCACT+AGG - chr4_3:63164344-63164363 Msa0654800:intron 25.0%
! CTAACTTTCTTCTATAGTTA+CGG - chr4_3:63164862-63164881 Msa0654800:intron 25.0%
!!! TTTATTTTCATAAGCTCTTC+GGG - chr4_3:63164994-63165013 Msa0654800:intron 25.0%
! CCCAAAATTGAATAAAATGA+TGG - chr4_3:63165138-63165157 Msa0654800:intron 25.0%
!! GCCATCATTTTATTCAATTT+TGG + chr4_3:63165142-63165161 None:intergenic 25.0%
! TACATCATAAACAAAGAACA+AGG + chr4_3:63165481-63165500 None:intergenic 25.0%
!!! TATTTTACGGATTTTGACTT+GGG - chr4_3:63165753-63165772 Msa0654800:intron 25.0%
!! ACCATTTGTTGATTAACAAT+TGG - chr4_3:63165817-63165836 Msa0654800:intron 25.0%
! AATAAGACATAGTAGAAACA+AGG + chr4_3:63165940-63165959 None:intergenic 25.0%
! ATAGTAGTATAATTGAACAG+AGG + chr4_3:63165965-63165984 None:intergenic 25.0%
! TTACAATATATTTGGCATTG+TGG - chr4_3:63165985-63166004 Msa0654800:intron 25.0%
! TTCAAAATTACTGTGTTTAC+TGG - chr4_3:63166077-63166096 Msa0654800:intron 25.0%
!!! GAAGTTTTTTTTCATTCTGA+AGG - chr4_3:63166099-63166118 Msa0654800:intron 25.0%
! TAGACGAAATATTAATACGA+CGG + chr4_3:63166195-63166214 None:intergenic 25.0%
!!! AACTGTTTAGGTTTTTAATG+TGG - chr4_3:63166693-63166712 Msa0654800:intron 25.0%
!!! ATCAGTTTTTTGACTCATTT+AGG - chr4_3:63166972-63166991 Msa0654800:intron 25.0%
!!! TCAGTTTTTTGACTCATTTA+GGG - chr4_3:63166973-63166992 Msa0654800:intron 25.0%
! ATTATAAAGACACGTAAACT+GGG + chr4_3:63167136-63167155 None:intergenic 25.0%
! TAACAAAAATTGTATCTGAC+AGG - chr4_3:63167445-63167464 Msa0654800:intron 25.0%
! AACAGAGTATAACAAGAAAA+TGG - chr4_3:63167526-63167545 Msa0654800:intron 25.0%
! ACAACTGAATATACAACTTA+AGG + chr4_3:63167756-63167775 None:intergenic 25.0%
!! GATACTTAAAATTGCAGTTT+TGG - chr4_3:63167854-63167873 Msa0654800:five_prime_UTR 25.0%
GGTTTATTGAGGAATATCTT+TGG - chr4_3:63159549-63159568 Msa0654800:three_prime_UTR 30.0%
!! AATATCTTTGGTTTGAACGA+CGG - chr4_3:63159561-63159580 Msa0654800:three_prime_UTR 30.0%
AATTGATGCCTTTAACAACA+AGG - chr4_3:63159599-63159618 Msa0654800:three_prime_UTR 30.0%
ATTGATGCCTTTAACAACAA+GGG - chr4_3:63159600-63159619 Msa0654800:three_prime_UTR 30.0%
!!! TGAGTTGTTGAAAGCATTTT+TGG + chr4_3:63159713-63159732 None:intergenic 30.0%
AATGCTTTCAACAACTCAAA+AGG - chr4_3:63159715-63159734 Msa0654800:exon 30.0%
ATATTGGAAACTAAAACCCT+AGG - chr4_3:63159782-63159801 Msa0654800:intron 30.0%
TCTTTCACCAAATGAAAAGA+AGG - chr4_3:63160065-63160084 Msa0654800:intron 30.0%
CTTTCACCAAATGAAAAGAA+GGG - chr4_3:63160066-63160085 Msa0654800:intron 30.0%
TTTCACCAAATGAAAAGAAG+GGG - chr4_3:63160067-63160086 Msa0654800:intron 30.0%
!! CTGAAGGGTATTTATATACT+TGG - chr4_3:63160166-63160185 Msa0654800:intron 30.0%
ATTGGATAATGATCTGATGA+AGG + chr4_3:63160303-63160322 None:intergenic 30.0%
ACTTGAAACGTGTATGATTA+CGG + chr4_3:63160359-63160378 None:intergenic 30.0%
!! GTTTCAAGTTTGAAAATGCT+TGG - chr4_3:63160370-63160389 Msa0654800:intron 30.0%
!! AAAATTATTTCTGCTCCAAC+TGG + chr4_3:63160496-63160515 None:intergenic 30.0%
!! CATGAAAGAATTTGGTGTTA+AGG + chr4_3:63160698-63160717 None:intergenic 30.0%
TATTGAAGAGTTCAAAACTG+CGG - chr4_3:63160932-63160951 Msa0654800:intron 30.0%
!! CAGAACTTTTGAAAAAATCC+CGG + chr4_3:63161005-63161024 None:intergenic 30.0%
GATTTACAAAGTAGTTGCAA+AGG - chr4_3:63161181-63161200 Msa0654800:intron 30.0%
CATATGAAGTCGAAAGTTAA+AGG - chr4_3:63161320-63161339 Msa0654800:intron 30.0%
TAAAGGTAAAATTGGAGAAG+TGG - chr4_3:63161337-63161356 Msa0654800:intron 30.0%
GACAAGTACAGAATAATCAA+CGG + chr4_3:63161483-63161502 None:intergenic 30.0%
GATTATTCTGTACTTGTCAA+CGG - chr4_3:63161485-63161504 Msa0654800:intron 30.0%
CTGTTTATTATTTGTGCAGA+AGG - chr4_3:63161572-63161591 Msa0654800:intron 30.0%
AAGAGGAGATGTGAAATAAT+TGG + chr4_3:63161668-63161687 None:intergenic 30.0%
! AGAAAATTTCGGACTTTTGA+AGG + chr4_3:63161793-63161812 None:intergenic 30.0%
GTTTCGACTACAGAAAATTT+CGG + chr4_3:63161804-63161823 None:intergenic 30.0%
AACAACATAGCTAATATCCT+TGG - chr4_3:63161842-63161861 Msa0654800:intron 30.0%
TCTGGAAGAAAATAAACTCA+TGG - chr4_3:63161960-63161979 Msa0654800:intron 30.0%
! AGTAAATGTTTATCTAAGGC+AGG - chr4_3:63161986-63162005 Msa0654800:CDS 30.0%
! ACTCATAAAATAGGTTGGAA+TGG + chr4_3:63162044-63162063 None:intergenic 30.0%
! AGATGATGAATTCTTTTTGG+TGG - chr4_3:63162104-63162123 Msa0654800:intron 30.0%
!! GATGATGAATTCTTTTTGGT+GGG - chr4_3:63162105-63162124 Msa0654800:intron 30.0%
!! ATGATGAATTCTTTTTGGTG+GGG - chr4_3:63162106-63162125 Msa0654800:intron 30.0%
AAGTCTTGGAACCTTTAATT+TGG - chr4_3:63162216-63162235 Msa0654800:intron 30.0%
!! ACCTTTAATTTGGCAATGTT+AGG - chr4_3:63162226-63162245 Msa0654800:intron 30.0%
ACCTAACATTGCCAAATTAA+AGG + chr4_3:63162230-63162249 None:intergenic 30.0%
!! AATTTTCTAGAAGCAAGCAT+AGG - chr4_3:63162328-63162347 Msa0654800:intron 30.0%
!! ATTTTCTAGAAGCAAGCATA+GGG - chr4_3:63162329-63162348 Msa0654800:intron 30.0%
TCCAATAATTATTCCAAACC+GGG + chr4_3:63162447-63162466 None:intergenic 30.0%
! ACAATCTGAAACACGTAAAT+TGG + chr4_3:63162521-63162540 None:intergenic 30.0%
AAATTCCAAGACTTCTGATT+CGG + chr4_3:63162550-63162569 None:intergenic 30.0%
TTGAAAACAGAATGCAGAAA+AGG + chr4_3:63162574-63162593 None:intergenic 30.0%
!! AGATCAGTTGATTTGGAAAA+AGG - chr4_3:63162648-63162667 Msa0654800:CDS 30.0%
ATGATGGTAACTATTCAGTT+CGG - chr4_3:63162674-63162693 Msa0654800:exon 30.0%
GTCCTAATAGCATGAATATT+TGG - chr4_3:63162935-63162954 Msa0654800:intron 30.0%
! CATGAATATTTGGAACAGAT+GGG - chr4_3:63162945-63162964 Msa0654800:intron 30.0%
! ATGAATATTTGGAACAGATG+GGG - chr4_3:63162946-63162965 Msa0654800:intron 30.0%
!! GTTGTATTTTATGGAGCATT+TGG - chr4_3:63163073-63163092 Msa0654800:intron 30.0%
GGAAAACAGCAAAATTCATT+CGG - chr4_3:63163181-63163200 Msa0654800:intron 30.0%
GAAAACAGCAAAATTCATTC+GGG - chr4_3:63163182-63163201 Msa0654800:intron 30.0%
AAAACAGCAAAATTCATTCG+GGG - chr4_3:63163183-63163202 Msa0654800:intron 30.0%
! TGAAAATGGTACTTTTGTTC+TGG - chr4_3:63163341-63163360 Msa0654800:intron 30.0%
! ATGTTTTATGCCTATTTGTG+AGG - chr4_3:63163374-63163393 Msa0654800:intron 30.0%
! TAATTTAAATTTAGGACCGG+TGG - chr4_3:63163446-63163465 Msa0654800:intron 30.0%
! TAAAATTTAGTCCCTCCTTT+TGG - chr4_3:63163762-63163781 Msa0654800:intron 30.0%
AAGATGGAAACAATTACAAG+TGG - chr4_3:63163925-63163944 Msa0654800:intron 30.0%
ATGATTAATGAACTTTCACC+TGG - chr4_3:63164294-63164313 Msa0654800:intron 30.0%
! TTTTCTTGAACTATTGATCC+AGG + chr4_3:63164315-63164334 None:intergenic 30.0%
TAACGTCTTAGTTGAACTTT+GGG - chr4_3:63164429-63164448 Msa0654800:intron 30.0%
TCGTTGTTGTAGCAAAAAAT+AGG - chr4_3:63164648-63164667 Msa0654800:intron 30.0%
TTATGACCAATGTGCAATTT+AGG + chr4_3:63165079-63165098 None:intergenic 30.0%
TGCACATTGGTCATAATAAA+AGG - chr4_3:63165083-63165102 Msa0654800:intron 30.0%
GCACATTGGTCATAATAAAA+GGG - chr4_3:63165084-63165103 Msa0654800:intron 30.0%
ATCATAAACAAAGAACAAGG+AGG + chr4_3:63165478-63165497 None:intergenic 30.0%
TAGTAATGAACCAGTAATTG+TGG + chr4_3:63165646-63165665 None:intergenic 30.0%
!!! GTATTTTACGGATTTTGACT+TGG - chr4_3:63165752-63165771 Msa0654800:intron 30.0%
GCCAATTGTTAATCAACAAA+TGG + chr4_3:63165821-63165840 None:intergenic 30.0%
TAAACATGTTTGAAGATGAG+TGG + chr4_3:63165873-63165892 None:intergenic 30.0%
!!! AACACAGTAATTTTGAAGCA+TGG + chr4_3:63166074-63166093 None:intergenic 30.0%
!!! TTTTTTTTCATTCTGAAGGG+AGG - chr4_3:63166103-63166122 Msa0654800:intron 30.0%
! GTAAAACAATGTTGCTTCAT+GGG + chr4_3:63166240-63166259 None:intergenic 30.0%
! TGTAAAACAATGTTGCTTCA+TGG + chr4_3:63166241-63166260 None:intergenic 30.0%
!! AATTCAGGTTGAATATGCAA+GGG + chr4_3:63166512-63166531 None:intergenic 30.0%
! CAACCTGAATTGTGTTATTA+TGG - chr4_3:63166521-63166540 Msa0654800:intron 30.0%
CAACCATAATAACACAATTC+AGG + chr4_3:63166527-63166546 None:intergenic 30.0%
! TATGTTTCAAAAATTGGCTC+AGG - chr4_3:63166659-63166678 Msa0654800:intron 30.0%
! ATGTTTCAAAAATTGGCTCA+GGG - chr4_3:63166660-63166679 Msa0654800:intron 30.0%
GGAATTTGTCAAAACTGTTT+AGG - chr4_3:63166681-63166700 Msa0654800:intron 30.0%
ATAACCTAGAAATTCCAAAG+TGG + chr4_3:63166871-63166890 None:intergenic 30.0%
GATTATAAAGACACGTAAAC+TGG + chr4_3:63167137-63167156 None:intergenic 30.0%
!! TGGATGGTATTTTAGAAAAC+TGG + chr4_3:63167200-63167219 None:intergenic 30.0%
!! TTCTAAAATACCATCCATTG+TGG - chr4_3:63167203-63167222 Msa0654800:intron 30.0%
TCAATTTGATCTGAGCAAAA+AGG - chr4_3:63167395-63167414 Msa0654800:intron 30.0%
TAACCTATCTGTCATATTCA+TGG - chr4_3:63167549-63167568 Msa0654800:intron 30.0%
CAAGAAAATGAATAAACCGA+TGG + chr4_3:63167692-63167711 None:intergenic 30.0%
CGAGTAGTTTCAATTAACAT+AGG + chr4_3:63167729-63167748 None:intergenic 30.0%
ATGTTAATTGAAACTACTCG+AGG - chr4_3:63167729-63167748 Msa0654800:intron 30.0%
!! ATAAGATGGCTGGTTTATTG+AGG - chr4_3:63159538-63159557 Msa0654800:three_prime_UTR 35.0%
! AATGAGGCTGATTTCAAAAC+TGG - chr4_3:63159639-63159658 Msa0654800:three_prime_UTR 35.0%
TACACTACTCATCGTAACAA+TGG - chr4_3:63159685-63159704 Msa0654800:three_prime_UTR 35.0%
AAAGGAGGAACTCAGAAATT+TGG - chr4_3:63159733-63159752 Msa0654800:CDS 35.0%
AAGAATTTGCAAGCTGTCTT+AGG + chr4_3:63160005-63160024 None:intergenic 35.0%
CAAATTCTTCCAACTTACCT+TGG - chr4_3:63160016-63160035 Msa0654800:intron 35.0%
! AGAGCTAATTGGCTTATCAA+TGG - chr4_3:63160099-63160118 Msa0654800:intron 35.0%
! GAGCTAATTGGCTTATCAAT+GGG - chr4_3:63160100-63160119 Msa0654800:intron 35.0%
TGTCAGATGTCTTTACTGAA+GGG - chr4_3:63160151-63160170 Msa0654800:intron 35.0%
TATACTTGGTTCAAATGCCT+TGG - chr4_3:63160180-63160199 Msa0654800:intron 35.0%
! GGTTCACAAAGAAGCATAAT+TGG + chr4_3:63160321-63160340 None:intergenic 35.0%
ATTATGCTTCTTTGTGAACC+AGG - chr4_3:63160321-63160340 Msa0654800:intron 35.0%
AACACTTTGTCCACAACAAA+TGG - chr4_3:63160412-63160431 Msa0654800:intron 35.0%
! CATATGATGACCATTTGTTG+TGG + chr4_3:63160425-63160444 None:intergenic 35.0%
CACAACAAATGGTCATCATA+TGG - chr4_3:63160423-63160442 Msa0654800:intron 35.0%
GTGAATAGTGACAACATTGA+TGG - chr4_3:63160576-63160595 Msa0654800:intron 35.0%
GCTTGAGAAATCGTATGAAT+AGG - chr4_3:63160607-63160626 Msa0654800:intron 35.0%
TATGAATAGGTTGCTAATCC+AGG - chr4_3:63160620-63160639 Msa0654800:intron 35.0%
TCTGTTTACCTTTCTTCTTG+AGG + chr4_3:63160730-63160749 None:intergenic 35.0%
AATATTGTTGTCATCCACCA+AGG + chr4_3:63160760-63160779 None:intergenic 35.0%
!!! CGGGATTTTTTCAAAAGTTC+TGG - chr4_3:63161003-63161022 Msa0654800:intron 35.0%
ATCACATTGCACAAAGCTAT+AGG + chr4_3:63161164-63161183 None:intergenic 35.0%
GAATTGAGTGGAACTATCTT+CGG - chr4_3:63161393-63161412 Msa0654800:intron 35.0%
AATTGAGTGGAACTATCTTC+GGG - chr4_3:63161394-63161413 Msa0654800:intron 35.0%
TAAACAGATACGGTGACAAA+GGG + chr4_3:63161559-63161578 None:intergenic 35.0%
ATAAACAGATACGGTGACAA+AGG + chr4_3:63161560-63161579 None:intergenic 35.0%
!! GACTCAAGCATTGAAAATGA+AGG - chr4_3:63161724-63161743 Msa0654800:intron 35.0%
CTGGGTACAGGTAAATATTT+AGG - chr4_3:63161878-63161897 Msa0654800:intron 35.0%
TTTCTTACTTCGACCTATCA+TGG + chr4_3:63161912-63161931 None:intergenic 35.0%
ATTTCATCACATAACGACGA+CGG + chr4_3:63162079-63162098 None:intergenic 35.0%
GCAATGCATAAAAATGATGG+AGG - chr4_3:63162181-63162200 Msa0654800:intron 35.0%
ATAAAGCAAGATATTTCCCG+CGG - chr4_3:63162302-63162321 Msa0654800:intron 35.0%
!!! ACAATCCAAGTTTTGTTTGG+AGG - chr4_3:63162353-63162372 Msa0654800:intron 35.0%
TTCTTAAAGCTGGTAGTAGA+TGG - chr4_3:63162398-63162417 Msa0654800:intron 35.0%
AGTAGATGGAAAATTGGTGA+CGG - chr4_3:63162412-63162431 Msa0654800:intron 35.0%
!! TCCCGGTTTGGAATAATTAT+TGG - chr4_3:63162443-63162462 Msa0654800:intron 35.0%
!! TGTTACTTTATACCCACTTG+AGG - chr4_3:63162477-63162496 Msa0654800:intron 35.0%
TGCATGAAGATCAGTTGATT+TGG - chr4_3:63162641-63162660 Msa0654800:CDS 35.0%
ACTTCACACTTCAAAATGCA+AGG - chr4_3:63162733-63162752 Msa0654800:intron 35.0%
ACTTCAAAATGCAAGGTTCT+TGG - chr4_3:63162740-63162759 Msa0654800:intron 35.0%
CTTCAAAATGCAAGGTTCTT+GGG - chr4_3:63162741-63162760 Msa0654800:intron 35.0%
! ATAGCTTGCACTTACTGTTT+CGG - chr4_3:63162911-63162930 Msa0654800:intron 35.0%
! GCATGAATATTTGGAACAGA+TGG - chr4_3:63162944-63162963 Msa0654800:intron 35.0%
AAATAACACCTCCTACACTA+TGG + chr4_3:63163008-63163027 None:intergenic 35.0%
AGCAGCGAAACAACAAAATT+TGG - chr4_3:63163097-63163116 Msa0654800:intron 35.0%
ATCCATTTGATTATACGCTC+TGG + chr4_3:63163231-63163250 None:intergenic 35.0%
!! TTCTAAAGCTTCAAACATGG+TGG - chr4_3:63163296-63163315 Msa0654800:intron 35.0%
! TCTAAAGCTTCAAACATGGT+GGG - chr4_3:63163297-63163316 Msa0654800:intron 35.0%
ATGTGTATCAGGGATGAAAA+TGG - chr4_3:63163327-63163346 Msa0654800:intron 35.0%
GGTTTCAATTCCCTAAATTG+TGG - chr4_3:63163501-63163520 Msa0654800:intron 35.0%
TTCAGTGACACCACAATTTA+GGG + chr4_3:63163514-63163533 None:intergenic 35.0%
ATTCAGTGACACCACAATTT+AGG + chr4_3:63163515-63163534 None:intergenic 35.0%
!! AATTGTGGTGTCACTGAATT+TGG - chr4_3:63163516-63163535 Msa0654800:intron 35.0%
!! ATTGTGGTGTCACTGAATTT+GGG - chr4_3:63163517-63163536 Msa0654800:intron 35.0%
! TGGTATTTCTACCACTAGTT+GGG + chr4_3:63163670-63163689 None:intergenic 35.0%
! ATGGTATTTCTACCACTAGT+TGG + chr4_3:63163671-63163690 None:intergenic 35.0%
ATATAATACGCACCTCCAAA+AGG + chr4_3:63163780-63163799 None:intergenic 35.0%
ATCTTAAAATCCACCACCTA+AGG + chr4_3:63164054-63164073 None:intergenic 35.0%
! AACTATTTTATACACCCGGT+AGG - chr4_3:63164108-63164127 Msa0654800:intron 35.0%
ATTCCTCATAATAACCTACC+GGG + chr4_3:63164125-63164144 None:intergenic 35.0%
CATTCCTCATAATAACCTAC+CGG + chr4_3:63164126-63164145 None:intergenic 35.0%
CTAACGTCTTAGTTGAACTT+TGG - chr4_3:63164428-63164447 Msa0654800:intron 35.0%
! CCTGTCTGAAATGTGAATAA+TGG + chr4_3:63164684-63164703 None:intergenic 35.0%
CCATTATTCACATTTCAGAC+AGG - chr4_3:63164681-63164700 Msa0654800:intron 35.0%
TCAAAAGAACGCTTCTTCTT+CGG - chr4_3:63164766-63164785 Msa0654800:intron 35.0%
TTTCTTCTATAGTTACGGTC+TGG - chr4_3:63164867-63164886 Msa0654800:intron 35.0%
!! CTTATTTTCACAAGCTCTTC+AGG - chr4_3:63164926-63164945 Msa0654800:intron 35.0%
! AATGCTGCATTGAGTTTTTC+AGG - chr4_3:63165280-63165299 Msa0654800:intron 35.0%
!!! GTTTTTCAGGAAACTAGTGT+TGG - chr4_3:63165293-63165312 Msa0654800:intron 35.0%
!!! GTTCTTTTTTTGCACTGCTT+TGG + chr4_3:63165379-63165398 None:intergenic 35.0%
AAGAAGTAGAAGAAAGCAGT+GGG + chr4_3:63165438-63165457 None:intergenic 35.0%
AAAAGTAGCACCACAATTAC+TGG - chr4_3:63165633-63165652 Msa0654800:intron 35.0%
! TATACTATCGCGTAAGTTGA+TGG - chr4_3:63165719-63165738 Msa0654800:intron 35.0%
!! ATACTATCGCGTAAGTTGAT+GGG - chr4_3:63165720-63165739 Msa0654800:intron 35.0%
!!! TAGAGTGTATTTTGACTTGG+AGG - chr4_3:63165776-63165795 Msa0654800:intron 35.0%
!!! TGTATTTTGACTTGGAGGAA+TGG - chr4_3:63165781-63165800 Msa0654800:intron 35.0%
GACATAGTAGAAACAAGGAT+AGG + chr4_3:63165935-63165954 None:intergenic 35.0%
CTTTCTGTGTTCATACAGAT+CGG - chr4_3:63166424-63166443 Msa0654800:intron 35.0%
! GTGGAAAACAATGACTTTTG+AGG - chr4_3:63166465-63166484 Msa0654800:intron 35.0%
!! CAATTCAGGTTGAATATGCA+AGG + chr4_3:63166513-63166532 None:intergenic 35.0%
AAGAAGTCATGATCAAGACA+TGG + chr4_3:63166740-63166759 None:intergenic 35.0%
TGGAAAGTTGGAATTCATTG+CGG - chr4_3:63166829-63166848 Msa0654800:intron 35.0%
!! AAGACCACTTTGGAATTTCT+AGG - chr4_3:63166864-63166883 Msa0654800:intron 35.0%
CCATTGTCAGGAATTTAAAC+AGG + chr4_3:63167349-63167368 None:intergenic 35.0%
CCTGTTTAAATTCCTGACAA+TGG - chr4_3:63167346-63167365 Msa0654800:intron 35.0%
GTTTAAATTCCTGACAATGG+AGG - chr4_3:63167349-63167368 Msa0654800:intron 35.0%
!! TTTGTTTTCTGATGCTTTGC+AGG - chr4_3:63167614-63167633 Msa0654800:intron 35.0%
TGAGTATGAAGAAACTGATG+AGG - chr4_3:63167644-63167663 Msa0654800:intron 35.0%
AGTATGACGAGTAAAACCAT+CGG - chr4_3:63167673-63167692 Msa0654800:intron 35.0%
! AGGTATTCCTTTTACCAAAC+TGG - chr4_3:63167904-63167923 Msa0654800:five_prime_UTR 35.0%
! GGTATTCCTTTTACCAAACT+GGG - chr4_3:63167905-63167924 Msa0654800:five_prime_UTR 35.0%
! TTTTACCAAACTGGGAATCA+GGG - chr4_3:63167913-63167932 Msa0654800:five_prime_UTR 35.0%
TGGCGAACAAGATTTCAATG+AGG - chr4_3:63159623-63159642 Msa0654800:three_prime_UTR 40.0%
ACTGGAGCAAAAGTTACCAA+AGG - chr4_3:63159657-63159676 Msa0654800:three_prime_UTR 40.0%
CTGGAGCAAAAGTTACCAAA+GGG - chr4_3:63159658-63159677 Msa0654800:three_prime_UTR 40.0%
GCTTTCAACAACTCAAAAGG+AGG - chr4_3:63159718-63159737 Msa0654800:exon 40.0%
!!! TTTGGTGTTTTCCCTCACAT+GGG - chr4_3:63159956-63159975 Msa0654800:intron 40.0%
! TTCCTCCCCTTCTTTTCATT+TGG + chr4_3:63160075-63160094 None:intergenic 40.0%
GGAGGAATGAAAGAGCTAAT+TGG - chr4_3:63160088-63160107 Msa0654800:intron 40.0%
AGTAAAGACATCTGACAGAC+CGG + chr4_3:63160148-63160167 None:intergenic 40.0%
CTGTCAGATGTCTTTACTGA+AGG - chr4_3:63160150-63160169 Msa0654800:intron 40.0%
!! TCAAATGCCTTGGTACTGAT+AGG - chr4_3:63160190-63160209 Msa0654800:intron 40.0%
!! CAAATGCCTTGGTACTGATA+GGG - chr4_3:63160191-63160210 Msa0654800:intron 40.0%
TTGCCAAGAATCAGAAGCAA+GGG + chr4_3:63160241-63160260 None:intergenic 40.0%
! AAGTTTTCCACAACCGCATT+GGG + chr4_3:63160273-63160292 None:intergenic 40.0%
! TAAGTTTTCCACAACCGCAT+TGG + chr4_3:63160274-63160293 None:intergenic 40.0%
! TAATGATCTGATGAAGGTGC+AGG + chr4_3:63160297-63160316 None:intergenic 40.0%
! TGGACAAAGTGTTTGAACTC+TGG + chr4_3:63160405-63160424 None:intergenic 40.0%
AAAACTTGAACTGTGTGCTG+CGG - chr4_3:63160464-63160483 Msa0654800:intron 40.0%
!! TTTAGCTCTTTGTCTCCAGA+AGG + chr4_3:63160652-63160671 None:intergenic 40.0%
GACAAAGAGCTAAAACTCAC+TGG - chr4_3:63160658-63160677 Msa0654800:intron 40.0%
CACCAAATTCTTTCATGCAG+CGG - chr4_3:63160701-63160720 Msa0654800:intron 40.0%
GGTAAACAGAATTACAGCCT+TGG - chr4_3:63160740-63160759 Msa0654800:intron 40.0%
AAACAGAATTACAGCCTTGG+TGG - chr4_3:63160743-63160762 Msa0654800:intron 40.0%
! AGAAGCAAAGCTTTGTGAAG+TGG - chr4_3:63160791-63160810 Msa0654800:intron 40.0%
ATGAATAGCTTCGACAACAG+GGG + chr4_3:63160865-63160884 None:intergenic 40.0%
CATGAATAGCTTCGACAACA+GGG + chr4_3:63160866-63160885 None:intergenic 40.0%
TCATGAATAGCTTCGACAAC+AGG + chr4_3:63160867-63160886 None:intergenic 40.0%
! AAAAGTTCTGGCCAACTTGT+GGG - chr4_3:63161015-63161034 Msa0654800:intron 40.0%
AATAACTCTTCCCCACAAGT+TGG + chr4_3:63161029-63161048 None:intergenic 40.0%
! TGTTGTAGTTGGTTGATGTC+AGG - chr4_3:63161056-63161075 Msa0654800:intron 40.0%
AATATTGCCCTCATTCCGAA+AGG - chr4_3:63161107-63161126 Msa0654800:intron 40.0%
AGAATCTCCTTTCGGAATGA+GGG + chr4_3:63161117-63161136 None:intergenic 40.0%
GTTGTCTGAGAATCTCCTTT+CGG + chr4_3:63161125-63161144 None:intergenic 40.0%
TATAGGTCTCCAGTCTTTCA+TGG + chr4_3:63161147-63161166 None:intergenic 40.0%
! TTGCAAAGGTTCTAGCCAAT+AGG - chr4_3:63161195-63161214 Msa0654800:intron 40.0%
CAGCACATTCTTCAACCTAT+TGG + chr4_3:63161213-63161232 None:intergenic 40.0%
! CAATAGGTTGAAGAATGTGC+TGG - chr4_3:63161211-63161230 Msa0654800:intron 40.0%
GGAACAAAAGCAGATTGAGT+AGG + chr4_3:63161251-63161270 None:intergenic 40.0%
!! ACTCAATCTGCTTTTGTTCC+AGG - chr4_3:63161251-63161270 Msa0654800:CDS 40.0%
AGGCATATGACAGAATTGAG+TGG - chr4_3:63161381-63161400 Msa0654800:intron 40.0%
TCTCTCAACAGTGGATCAAA+TGG - chr4_3:63161438-63161457 Msa0654800:intron 40.0%
!! CAAATGGATTATGCTGTGTG+TGG - chr4_3:63161454-63161473 Msa0654800:intron 40.0%
CTTGTCAACGGTAATGTTAC+AGG - chr4_3:63161497-63161516 Msa0654800:intron 40.0%
GTTACAGGTCCTATTATTCC+TGG - chr4_3:63161512-63161531 Msa0654800:intron 40.0%
AAGCCTCTACCAGGAATAAT+AGG + chr4_3:63161524-63161543 None:intergenic 40.0%
GAAGCTAGAGGTGAAATCAA+TGG - chr4_3:63161620-63161639 Msa0654800:intron 40.0%
AAAAGCAATCATCTGCGAAG+AGG + chr4_3:63161685-63161704 None:intergenic 40.0%
TCTGTTTATGAGAAGGCTTC+AGG - chr4_3:63161755-63161774 Msa0654800:intron 40.0%
!! TTCGGACTTTTGAAGGTTGA+TGG + chr4_3:63161786-63161805 None:intergenic 40.0%
AGCTAATATCCTTGGAGTAC+AGG - chr4_3:63161850-63161869 Msa0654800:intron 40.0%
TAATATCCTTGGAGTACAGG+CGG - chr4_3:63161853-63161872 Msa0654800:intron 40.0%
TTAGGACTTCCATCCATGAT+AGG - chr4_3:63161896-63161915 Msa0654800:intron 40.0%
TTACTTCGACCTATCATGGA+TGG + chr4_3:63161908-63161927 None:intergenic 40.0%
TTTCATCACATAACGACGAC+GGG + chr4_3:63162078-63162097 None:intergenic 40.0%
AGGAATACACTGGATGTCTT+GGG - chr4_3:63162150-63162169 Msa0654800:intron 40.0%
GGTATGAGCTTCAAAAGTCT+TGG - chr4_3:63162202-63162221 Msa0654800:intron 40.0%
TTGGCAATGTTAGGTAAGCA+AGG - chr4_3:63162235-63162254 Msa0654800:intron 40.0%
TGGCAATGTTAGGTAAGCAA+GGG - chr4_3:63162236-63162255 Msa0654800:intron 40.0%
! CTTCTAGAAAATTACACCGC+GGG + chr4_3:63162321-63162340 None:intergenic 40.0%
! GCTTCTAGAAAATTACACCG+CGG + chr4_3:63162322-63162341 None:intergenic 40.0%
!!! GGCACAATCCAAGTTTTGTT+TGG - chr4_3:63162350-63162369 Msa0654800:intron 40.0%
AAGCTCCTCCAAACAAAACT+TGG + chr4_3:63162361-63162380 None:intergenic 40.0%
GCTGGTAGTAGATGGAAAAT+TGG - chr4_3:63162406-63162425 Msa0654800:intron 40.0%
AACACGTAAATTGGCTAACG+TGG + chr4_3:63162512-63162531 None:intergenic 40.0%
TAATGCCGAATCAGAAGTCT+TGG - chr4_3:63162542-63162561 Msa0654800:intron 40.0%
TCATGCACTGAAGGATACAA+AGG + chr4_3:63162628-63162647 None:intergenic 40.0%
AACTGATCTTCATGCACTGA+AGG + chr4_3:63162637-63162656 None:intergenic 40.0%
AAGGTTCTTGGGATTTAGTG+TGG - chr4_3:63162752-63162771 Msa0654800:intron 40.0%
CATGTGCAATTTGAGTGATG+AGG - chr4_3:63162888-63162907 Msa0654800:intron 40.0%
!! TGAACCAAGTACTGACAGTA+GGG + chr4_3:63162978-63162997 None:intergenic 40.0%
TTCAGCCAAAACCATAGTGT+AGG - chr4_3:63162994-63163013 Msa0654800:intron 40.0%
AGCCAGAGCGTATAATCAAA+TGG - chr4_3:63163226-63163245 Msa0654800:intron 40.0%
TGGGAATAGGAATGTGTATC+AGG - chr4_3:63163316-63163335 Msa0654800:intron 40.0%
GGGAATAGGAATGTGTATCA+GGG - chr4_3:63163317-63163336 Msa0654800:intron 40.0%
!! GCTTCTGTCTGCTTTAGAAT+GGG - chr4_3:63163419-63163438 Msa0654800:intron 40.0%
GCATCCAATTCAAAATCCAC+CGG + chr4_3:63163465-63163484 None:intergenic 40.0%
TGAATTGGATGCTAAGAGAG+TGG - chr4_3:63163473-63163492 Msa0654800:intron 40.0%
! AATTTAGTCCCTCCTTTTGG+AGG - chr4_3:63163765-63163784 Msa0654800:intron 40.0%
AATGACCTAAACTCCACCTA+AGG - chr4_3:63164020-63164039 Msa0654800:intron 40.0%
TTAAAATCCACCACCTAAGG+CGG + chr4_3:63164051-63164070 None:intergenic 40.0%
! ACTCTTCTATCTCTAGAGGA+AGG + chr4_3:63164464-63164483 None:intergenic 40.0%
GTGAACTCTTCTATCTCTAG+AGG + chr4_3:63164468-63164487 None:intergenic 40.0%
ATTCACATTTCAGACAGGTG+TGG - chr4_3:63164686-63164705 Msa0654800:intron 40.0%
!! TGATAGTTGAGAAGCACCAA+TGG - chr4_3:63164718-63164737 Msa0654800:intron 40.0%
!!! GCTTTAGCTTTTTTCGCCAT+TGG + chr4_3:63164737-63164756 None:intergenic 40.0%
GGAGAGTAGAGAAAGTGAAA+GGG + chr4_3:63164808-63164827 None:intergenic 40.0%
AGGAGAGTAGAGAAAGTGAA+AGG + chr4_3:63164809-63164828 None:intergenic 40.0%
! TACTCTCCTTTTCGTTCACA+AGG - chr4_3:63164820-63164839 Msa0654800:intron 40.0%
! ACTCTCCTTTTCGTTCACAA+GGG - chr4_3:63164821-63164840 Msa0654800:intron 40.0%
! CTTTTCCCTTGTGAACGAAA+AGG + chr4_3:63164829-63164848 None:intergenic 40.0%
GGAAGACCTAAATTGCACAT+TGG - chr4_3:63165070-63165089 Msa0654800:intron 40.0%
AAGGGACCAACAATGCAATT+AGG - chr4_3:63165102-63165121 Msa0654800:intron 40.0%
!! CAATTTTGGGTCTAAGACCA+AGG + chr4_3:63165128-63165147 None:intergenic 40.0%
TAGCTTCAGGTGTTAGTAGT+GGG - chr4_3:63165200-63165219 Msa0654800:intron 40.0%
TTGGCGATCAAATCGAATGA+GGG - chr4_3:63165312-63165331 Msa0654800:intron 40.0%
AGAAGTAGAAGAAAGCAGTG+GGG + chr4_3:63165437-63165456 None:intergenic 40.0%
CAAGAAGTAGAAGAAAGCAG+TGG + chr4_3:63165439-63165458 None:intergenic 40.0%
! ACAAGGGTTTTGCTGCATTA+AGG - chr4_3:63165589-63165608 Msa0654800:intron 40.0%
ACTGATCTGTGTGTTTCCTT+TGG - chr4_3:63165693-63165712 Msa0654800:intron 40.0%
ACGCGATAGTATAACTCCAA+AGG + chr4_3:63165712-63165731 None:intergenic 40.0%
!! TACTATCGCGTAAGTTGATG+GGG - chr4_3:63165721-63165740 Msa0654800:intron 40.0%
! GGGGGTTCTGTTGTATTTTA+CGG - chr4_3:63165740-63165759 Msa0654800:intron 40.0%
!!! GGGTAGAGTGTATTTTGACT+TGG - chr4_3:63165773-63165792 Msa0654800:intron 40.0%
TGCTCAACTCTTGAACTTGA+GGG + chr4_3:63165849-63165868 None:intergenic 40.0%
TTGCTCAACTCTTGAACTTG+AGG + chr4_3:63165850-63165869 None:intergenic 40.0%
!! CATTCTGAAGGGAGGATTTT+CGG - chr4_3:63166111-63166130 Msa0654800:intron 40.0%
!! TCACGCATTGACTTAACATC+TGG + chr4_3:63166158-63166177 None:intergenic 40.0%
TCTGTATGAACACAGAAAGG+AGG + chr4_3:63166423-63166442 None:intergenic 40.0%
CGATCTGTATGAACACAGAA+AGG + chr4_3:63166426-63166445 None:intergenic 40.0%
AGGTAAGTTTCCACAATGGA+TGG + chr4_3:63167216-63167235 None:intergenic 40.0%
ATCCATTGTGGAAACTTACC+TGG - chr4_3:63167215-63167234 Msa0654800:intron 40.0%
TCCATTGTGGAAACTTACCT+GGG - chr4_3:63167216-63167235 Msa0654800:intron 40.0%
GCAAAAAGGAAACACCACTT+TGG - chr4_3:63167409-63167428 Msa0654800:intron 40.0%
AACATAGAGCTCAACCAAAG+TGG + chr4_3:63167426-63167445 None:intergenic 40.0%
TGGCCATGAATATGACAGAT+AGG + chr4_3:63167555-63167574 None:intergenic 40.0%
CCAAATAAGAGTCAGTTCAC+TGG + chr4_3:63167575-63167594 None:intergenic 40.0%
! CCAGTGAACTGACTCTTATT+TGG - chr4_3:63167572-63167591 Msa0654800:intron 40.0%
TATTCAGTTGTAGTCAGCTC+TGG - chr4_3:63167765-63167784 Msa0654800:five_prime_UTR 40.0%
CTGATTCCCAGTTTGGTAAA+AGG + chr4_3:63167914-63167933 None:intergenic 40.0%
! CTTTTACCAAACTGGGAATC+AGG - chr4_3:63167912-63167931 Msa0654800:five_prime_UTR 40.0%
!! ATCTTTGGTTTGAACGACGG+TGG - chr4_3:63159564-63159583 Msa0654800:three_prime_UTR 45.0%
TTGAACGACGGTGGAAACAA+TGG - chr4_3:63159573-63159592 Msa0654800:three_prime_UTR 45.0%
GATGCCTTTAACAACAAGGG+TGG - chr4_3:63159603-63159622 Msa0654800:three_prime_UTR 45.0%
!! TTCGCCACCCTTGTTGTTAA+AGG + chr4_3:63159610-63159629 None:intergenic 45.0%
GAGCAAAAGTTACCAAAGGG+TGG - chr4_3:63159661-63159680 Msa0654800:three_prime_UTR 45.0%
TGAGTAGTGTAACCACCCTT+TGG + chr4_3:63159676-63159695 None:intergenic 45.0%
GAAAAGCCAAGTTCGACACT+GGG - chr4_3:63159755-63159774 Msa0654800:CDS 45.0%
AAAAGCCAAGTTCGACACTG+GGG - chr4_3:63159756-63159775 Msa0654800:CDS 45.0%
TTCGACACTGGGGCTAATAT+TGG - chr4_3:63159766-63159785 Msa0654800:intron 45.0%
GAAGCTCATCAAAGCTCCTA+GGG + chr4_3:63159801-63159820 None:intergenic 45.0%
AGAAGCTCATCAAAGCTCCT+AGG + chr4_3:63159802-63159821 None:intergenic 45.0%
!!! GTTTGGTGTTTTCCCTCACA+TGG - chr4_3:63159955-63159974 Msa0654800:intron 45.0%
TAGGATGCACCAAGGTAAGT+TGG + chr4_3:63160028-63160047 None:intergenic 45.0%
! AACTTACCTTGGTGCATCCT+AGG - chr4_3:63160027-63160046 Msa0654800:intron 45.0%
AAATCACCTAGGATGCACCA+AGG + chr4_3:63160036-63160055 None:intergenic 45.0%
CACCAAATGAAAAGAAGGGG+AGG - chr4_3:63160070-63160089 Msa0654800:intron 45.0%
CTTGCCAAGAATCAGAAGCA+AGG + chr4_3:63160242-63160261 None:intergenic 45.0%
CTTGCTTCTGATTCTTGGCA+AGG - chr4_3:63160240-63160259 Msa0654800:intron 45.0%
! AGTTTTCCACAACCGCATTG+GGG + chr4_3:63160272-63160291 None:intergenic 45.0%
! GCATGCGCTCAAGTTGTTTA+CGG + chr4_3:63160548-63160567 None:intergenic 45.0%
TAATCCAGGAAGATGCCTTC+TGG - chr4_3:63160634-63160653 Msa0654800:intron 45.0%
! GAGCTAAAACTCACTGGTTG+CGG - chr4_3:63160664-63160683 Msa0654800:intron 45.0%
! AGCTAAAACTCACTGGTTGC+GGG - chr4_3:63160665-63160684 Msa0654800:intron 45.0%
ATGAAACCTGACAAGTGTGC+TGG - chr4_3:63160963-63160982 Msa0654800:intron 45.0%
ATCCCGGATTAAAGCCATCT+GGG + chr4_3:63160989-63161008 None:intergenic 45.0%
AATCCCGGATTAAAGCCATC+TGG + chr4_3:63160990-63161009 None:intergenic 45.0%
! CAAAAGTTCTGGCCAACTTG+TGG - chr4_3:63161014-63161033 Msa0654800:intron 45.0%
! AAAGTTCTGGCCAACTTGTG+GGG - chr4_3:63161016-63161035 Msa0654800:intron 45.0%
GAGAATCTCCTTTCGGAATG+AGG + chr4_3:63161118-63161137 None:intergenic 45.0%
CTCAGACAACCATGAAAGAC+TGG - chr4_3:63161135-63161154 Msa0654800:intron 45.0%
TCGGGAGGTGATGATAAAGA+TGG - chr4_3:63161412-63161431 Msa0654800:intron 45.0%
CGGGAGGTGATGATAAAGAT+GGG - chr4_3:63161413-63161432 Msa0654800:intron 45.0%
AGATGGGATTCTCTCAACAG+TGG - chr4_3:63161429-63161448 Msa0654800:intron 45.0%
GGTCCTATTATTCCTGGTAG+AGG - chr4_3:63161518-63161537 Msa0654800:intron 45.0%
TTATTCCTGGTAGAGGCTTG+CGG - chr4_3:63161525-63161544 Msa0654800:intron 45.0%
ATTCGTAGAGCAGAAGCTAG+AGG - chr4_3:63161608-63161627 Msa0654800:intron 45.0%
!! TCTTTTTGGTGGGGTCATTC+TGG - chr4_3:63162115-63162134 Msa0654800:intron 45.0%
!! CATTCTGGTTCAAACAAGCG+AGG - chr4_3:63162130-63162149 Msa0654800:intron 45.0%
CAAACAAGCGAGGAATACAC+TGG - chr4_3:63162140-63162159 Msa0654800:intron 45.0%
GAGGAATACACTGGATGTCT+TGG - chr4_3:63162149-63162168 Msa0654800:intron 45.0%
CAATGTTAGGTAAGCAAGGG+TGG - chr4_3:63162239-63162258 Msa0654800:intron 45.0%
! GCATTCTGTTTTCAACCAGC+AGG - chr4_3:63162579-63162598 Msa0654800:intron 45.0%
! TTCTGTTTTCAACCAGCAGG+TGG - chr4_3:63162582-63162601 Msa0654800:intron 45.0%
CTTTCCCTACTGTCAGTACT+TGG - chr4_3:63162971-63162990 Msa0654800:intron 45.0%
!! CTGAACCAAGTACTGACAGT+AGG + chr4_3:63162979-63162998 None:intergenic 45.0%
AGCCAAAACCATAGTGTAGG+AGG - chr4_3:63162997-63163016 Msa0654800:intron 45.0%
! CACCTCCTACACTATGGTTT+TGG + chr4_3:63163002-63163021 None:intergenic 45.0%
!!! GAGTGTTGTTTTTGATCGCG+CGG - chr4_3:63163140-63163159 Msa0654800:intron 45.0%
TATACGCTCTGGCTGTTGAT+GGG + chr4_3:63163220-63163239 None:intergenic 45.0%
TTATACGCTCTGGCTGTTGA+TGG + chr4_3:63163221-63163240 None:intergenic 45.0%
AAATGGATGAAGCCAAGTCC+AGG - chr4_3:63163243-63163262 Msa0654800:intron 45.0%
ACATTACACTTGAACCGACC+TGG + chr4_3:63163264-63163283 None:intergenic 45.0%
! GCTTCAAACATGGTGGGAAT+AGG - chr4_3:63163303-63163322 Msa0654800:intron 45.0%
CCAATGTGCACCTCACAAAT+AGG + chr4_3:63163387-63163406 None:intergenic 45.0%
CCTATTTGTGAGGTGCACAT+TGG - chr4_3:63163384-63163403 Msa0654800:intron 45.0%
!! TGCACATTGGAGAAGCGTTA+GGG - chr4_3:63163397-63163416 Msa0654800:intron 45.0%
!! GGCTTCTGTCTGCTTTAGAA+TGG - chr4_3:63163418-63163437 Msa0654800:intron 45.0%
!! AGGACCGGTGGATTTTGAAT+TGG - chr4_3:63163458-63163477 Msa0654800:intron 45.0%
GATGCTAAGAGAGTGGTTGA+TGG - chr4_3:63163480-63163499 Msa0654800:intron 45.0%
GGTTGCTCATAGCTTAGCAA+AGG - chr4_3:63163623-63163642 Msa0654800:intron 45.0%
TGCTCATAGCTTAGCAAAGG+CGG - chr4_3:63163626-63163645 Msa0654800:intron 45.0%
AATACGCACCTCCAAAAGGA+GGG + chr4_3:63163776-63163795 None:intergenic 45.0%
TAATACGCACCTCCAAAAGG+AGG + chr4_3:63163777-63163796 None:intergenic 45.0%
ACCTAAACTCCACCTAAGGA+GGG - chr4_3:63164024-63164043 Msa0654800:intron 45.0%
TAAAATCCACCACCTAAGGC+GGG + chr4_3:63164050-63164069 None:intergenic 45.0%
ACACCCGGTAGGTTATTATG+AGG - chr4_3:63164119-63164138 Msa0654800:intron 45.0%
!! AGCGTTCTTTTGAGAGTGAG+AGG + chr4_3:63164759-63164778 None:intergenic 45.0%
!! AGAGAAAGTGAAAGGGTACC+CGG + chr4_3:63164801-63164820 None:intergenic 45.0%
CCAAGGCCTAATTGCATTGT+TGG + chr4_3:63165111-63165130 None:intergenic 45.0%
CCAACAATGCAATTAGGCCT+TGG - chr4_3:63165108-63165127 Msa0654800:intron 45.0%
TGTGAGTTTCAACCGTGTCT+AGG - chr4_3:63165167-63165186 Msa0654800:intron 45.0%
! TAGAGGTGTAGACCTAGACA+CGG + chr4_3:63165182-63165201 None:intergenic 45.0%
CTACTAACACCTGAAGCTAG+AGG + chr4_3:63165199-63165218 None:intergenic 45.0%
CTAGCTTCAGGTGTTAGTAG+TGG - chr4_3:63165199-63165218 Msa0654800:intron 45.0%
AGCTTCAGGTGTTAGTAGTG+GGG - chr4_3:63165201-63165220 Msa0654800:intron 45.0%
GTTGGCGATCAAATCGAATG+AGG - chr4_3:63165311-63165330 Msa0654800:intron 45.0%
AGGGAATGAAGAGATCGTTG+CGG - chr4_3:63165331-63165350 Msa0654800:intron 45.0%
AAGTAGAAGAAAGCAGTGGG+GGG + chr4_3:63165435-63165454 None:intergenic 45.0%
GAAGTAGAAGAAAGCAGTGG+GGG + chr4_3:63165436-63165455 None:intergenic 45.0%
!! ACTATCGCGTAAGTTGATGG+GGG - chr4_3:63165722-63165741 Msa0654800:intron 45.0%
GCTCAACTCTTGAACTTGAG+GGG + chr4_3:63165848-63165867 None:intergenic 45.0%
TGTGTTCATACAGATCGGCA+AGG - chr4_3:63166429-63166448 Msa0654800:intron 45.0%
AGCAGAACTGAAGACCACTT+TGG - chr4_3:63166854-63166873 Msa0654800:intron 45.0%
AACTGATGATCATGCAAGCC+TGG + chr4_3:63166959-63166978 None:intergenic 45.0%
ATCAACACGAGTACCTTTGC+AGG - chr4_3:63167047-63167066 Msa0654800:intron 45.0%
CAAGTACCACAAACCTGCAA+AGG + chr4_3:63167063-63167082 None:intergenic 45.0%
! CACGTAAACTGGGTGCTATA+AGG + chr4_3:63167126-63167145 None:intergenic 45.0%
TCCCAGGTAAGTTTCCACAA+TGG + chr4_3:63167220-63167239 None:intergenic 45.0%
TGGAAACTTACCTGGGACTA+AGG - chr4_3:63167223-63167242 Msa0654800:intron 45.0%
TCTGATGCTTTGCAGGAAAG+CGG - chr4_3:63167621-63167640 Msa0654800:intron 45.0%
!!! ATAATTTTAATTATAAAAGA+TGG - chr4_3:63163909-63163928 Msa0654800:intron 5.0%
!!! AAATATGTATTTTTAAATTA+TGG + chr4_3:63164182-63164201 None:intergenic 5.0%
!!! TTCATATTATTTTTAAATTA+AGG + chr4_3:63164618-63164637 None:intergenic 5.0%
!! AATAAAAAAAATTAAAGAAA+AGG - chr4_3:63167166-63167185 Msa0654800:intron 5.0%
!! ATAAAAAAAATTAAAGAAAA+GGG - chr4_3:63167167-63167186 Msa0654800:intron 5.0%
GGAAAAGCCAAGTTCGACAC+TGG - chr4_3:63159754-63159773 Msa0654800:CDS 50.0%
! ATTAGCCCCAGTGTCGAACT+TGG + chr4_3:63159764-63159783 None:intergenic 50.0%
TCTCTTCTTCGCCCATGTGA+GGG + chr4_3:63159970-63159989 None:intergenic 50.0%
CGGCATCAGTAACTGCGTTT+CGG + chr4_3:63160128-63160147 None:intergenic 50.0%
CGAAACGCAGTTACTGATGC+CGG - chr4_3:63160126-63160145 Msa0654800:intron 50.0%
CTACAGCCCTATCAGTACCA+AGG + chr4_3:63160200-63160219 None:intergenic 50.0%
CTGATAGGGCTGTAGAAGAG+AGG - chr4_3:63160205-63160224 Msa0654800:intron 50.0%
TAGGGCTGTAGAAGAGAGGT+TGG - chr4_3:63160209-63160228 Msa0654800:intron 50.0%
GTGCCCTTGCTTCTGATTCT+TGG - chr4_3:63160235-63160254 Msa0654800:intron 50.0%
GCAAGGTCAATACCCCAATG+CGG - chr4_3:63160257-63160276 Msa0654800:intron 50.0%
TCAATACCCCAATGCGGTTG+TGG - chr4_3:63160263-63160282 Msa0654800:intron 50.0%
!! TTACGGTGTTGTCGCAATCC+TGG + chr4_3:63160342-63160361 None:intergenic 50.0%
ACTTGAGCGCATGCATGTAC+AGG - chr4_3:63160554-63160573 Msa0654800:intron 50.0%
! AAAACTCACTGGTTGCGGGA+TGG - chr4_3:63160669-63160688 Msa0654800:intron 50.0%
CGCCGCTGCATGAAAGAATT+TGG + chr4_3:63160706-63160725 None:intergenic 50.0%
!! TGGCCCAGATGGCTTTAATC+CGG - chr4_3:63160983-63161002 Msa0654800:intron 50.0%
TGAGTGGAACTATCTTCGGG+AGG - chr4_3:63161397-63161416 Msa0654800:intron 50.0%
!! TGGTGACGGTACATCTATCC+CGG - chr4_3:63162426-63162445 Msa0654800:intron 50.0%
ACGGTACATCTATCCCGGTT+TGG - chr4_3:63162431-63162450 Msa0654800:intron 50.0%
TGGTCGCAACATCCTCAAGT+GGG + chr4_3:63162492-63162511 None:intergenic 50.0%
! TGTTTTCAACCAGCAGGTGG+TGG - chr4_3:63162585-63162604 Msa0654800:intron 50.0%
CAATATGTTCCACCACCTGC+TGG + chr4_3:63162597-63162616 None:intergenic 50.0%
ATTGCCTTCCCACTCGTTGT+CGG - chr4_3:63162827-63162846 Msa0654800:intron 50.0%
! CGTTGTCGGCTACGTGATAA+AGG - chr4_3:63162841-63162860 Msa0654800:intron 50.0%
CGGTGACATTGTTACAGGAC+TGG - chr4_3:63163160-63163179 Msa0654800:intron 50.0%
!! GTGCACATTGGAGAAGCGTT+AGG - chr4_3:63163396-63163415 Msa0654800:intron 50.0%
ACTCACGTGTCGAGTTTGTG+CGG - chr4_3:63163586-63163605 Msa0654800:intron 50.0%
TTGGGAACTAGCTGACACCA+AGG + chr4_3:63163652-63163671 None:intergenic 50.0%
GTCAGCTAGTTCCCAACTAG+TGG - chr4_3:63163656-63163675 Msa0654800:intron 50.0%
GACCTAAACTCCACCTAAGG+AGG - chr4_3:63164023-63164042 Msa0654800:intron 50.0%
TTTCAGACAGGTGTGGTTGC+AGG - chr4_3:63164693-63164712 Msa0654800:intron 50.0%
TTCAGACAGGTGTGGTTGCA+GGG - chr4_3:63164694-63164713 Msa0654800:intron 50.0%
! AGGTCTACACCTCTAGCTTC+AGG - chr4_3:63165187-63165206 Msa0654800:intron 50.0%
AAAGCAGTGGGGGGTTTCTT+CGG + chr4_3:63165426-63165445 None:intergenic 50.0%
ATACAGATCGGCAAGGCATG+CGG - chr4_3:63166436-63166455 Msa0654800:intron 50.0%
AGTTGCAGAACTGTCTCCTC+TGG - chr4_3:63166925-63166944 Msa0654800:intron 50.0%
TCTCCTCTGGTTGGAATTCC+AGG - chr4_3:63166938-63166957 Msa0654800:intron 50.0%
AAGCCTGGAATTCCAACCAG+AGG + chr4_3:63166944-63166963 None:intergenic 50.0%
CGAGTACCTTTGCAGGTTTG+TGG - chr4_3:63167054-63167073 Msa0654800:intron 50.0%
AGCTTCTTCTCGATAGCAGC+AGG + chr4_3:63167259-63167278 None:intergenic 50.0%
CTTGACACTCCTCCATTGTC+AGG + chr4_3:63167361-63167380 None:intergenic 50.0%
GAAGACCCTGATTCCCAGTT+TGG + chr4_3:63167921-63167940 None:intergenic 50.0%
CTCTCTTCTTCGCCCATGTG+AGG + chr4_3:63159971-63159990 None:intergenic 55.0%
CTCACATGGGCGAAGAAGAG+AGG - chr4_3:63159969-63159988 Msa0654800:intron 55.0%
ATGGGCGAAGAAGAGAGGCA+TGG - chr4_3:63159974-63159993 Msa0654800:intron 55.0%
!! GTCTCCAGAAGGCATCTTCC+TGG + chr4_3:63160641-63160660 None:intergenic 55.0%
AGCGGCGTCCTCAAGAAGAA+AGG - chr4_3:63160719-63160738 Msa0654800:intron 55.0%
! GGGGCTGTTTCGCTATCTTG+TGG + chr4_3:63160846-63160865 None:intergenic 55.0%
!! GGCCCAGATGGCTTTAATCC+GGG - chr4_3:63160984-63161003 Msa0654800:intron 55.0%
CTTGGAGTACAGGCGGTTCT+GGG - chr4_3:63161860-63161879 Msa0654800:intron 55.0%
GTGGTCGCAACATCCTCAAG+TGG + chr4_3:63162493-63162512 None:intergenic 55.0%
TCACGTAGCCGACAACGAGT+GGG + chr4_3:63162838-63162857 None:intergenic 55.0%
ATCACGTAGCCGACAACGAG+TGG + chr4_3:63162839-63162858 None:intergenic 55.0%
TCGCGCGGTGACATTGTTAC+AGG - chr4_3:63163155-63163174 Msa0654800:intron 55.0%
GGATGAAGCCAAGTCCAGGT+CGG - chr4_3:63163247-63163266 Msa0654800:intron 55.0%
CACTTGAACCGACCTGGACT+TGG + chr4_3:63163258-63163277 None:intergenic 55.0%
TGTGCGGAGACAAGCAAACG+AGG - chr4_3:63163602-63163621 Msa0654800:intron 55.0%
TAGCTTAGCAAAGGCGGCCT+TGG - chr4_3:63163632-63163651 Msa0654800:intron 55.0%
GCCCTCCTTAGGTGGAGTTT+AGG + chr4_3:63164028-63164047 None:intergenic 55.0%
!! GAAAGTGAAAGGGTACCCGG+AGG + chr4_3:63164798-63164817 None:intergenic 55.0%
GCAGAACTGTCTCCTCTGGT+TGG - chr4_3:63166929-63166948 Msa0654800:intron 55.0%
CTTTCACGTGCCTTAGTCCC+AGG + chr4_3:63167236-63167255 None:intergenic 55.0%
GTGCTGCGGATCTGTCCAGT+TGG - chr4_3:63160478-63160497 Msa0654800:intron 60.0%
TCTGGGCCAGCACACTTGTC+AGG + chr4_3:63160972-63160991 None:intergenic 60.0%
! GACAAGTGTGCTGGCCCAGA+TGG - chr4_3:63160972-63160991 Msa0654800:intron 60.0%
CCAGAACCGCCTGTACTCCA+AGG + chr4_3:63161862-63161881 None:intergenic 60.0%
CCTTGGAGTACAGGCGGTTC+TGG - chr4_3:63161859-63161878 Msa0654800:intron 60.0%
!! GTACAGGCGGTTCTGGGTAC+AGG - chr4_3:63161866-63161885 Msa0654800:intron 60.0%
GTAGCCGACAACGAGTGGGA+AGG + chr4_3:63162834-63162853 None:intergenic 60.0%
TCTTCTTCGGCCTCCACCTC+CGG - chr4_3:63164779-63164798 Msa0654800:intron 60.0%
!! AGTGAAAGGGTACCCGGAGG+TGG + chr4_3:63164795-63164814 None:intergenic 60.0%
GACTTGGAGGAATGGCGCAG+AGG - chr4_3:63165789-63165808 Msa0654800:intron 60.0%
TTGGAGGAATGGCGCAGAGG+AGG - chr4_3:63165792-63165811 Msa0654800:intron 60.0%
GCAAGGCATGCGGAGAGAAG+TGG - chr4_3:63166446-63166465 Msa0654800:intron 60.0%
CCTTGCCGCAAGCCTCTACC+AGG + chr4_3:63161533-63161552 None:intergenic 65.0%
CCTGGTAGAGGCTTGCGGCA+AGG - chr4_3:63161530-63161549 Msa0654800:intron 65.0%
TAAGGCGGGCCCTCCTTAGG+TGG + chr4_3:63164036-63164055 None:intergenic 65.0%
ACCTAAGGAGGGCCCGCCTT+AGG - chr4_3:63164035-63164054 Msa0654800:intron 65.0%
ACCTAAGGCGGGCCCTCCTT+AGG + chr4_3:63164039-63164058 None:intergenic 65.0%
TAAGGAGGGCCCGCCTTAGG+TGG - chr4_3:63164038-63164057 Msa0654800:intron 65.0%
CTTCTTCGGCCTCCACCTCC+GGG - chr4_3:63164780-63164799 Msa0654800:intron 65.0%
!! GAAAGGGTACCCGGAGGTGG+AGG + chr4_3:63164792-63164811 None:intergenic 65.0%
GGAGGGCCCGCCTTAGGTGG+TGG - chr4_3:63164041-63164060 Msa0654800:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 63159459 63167960 63159459 ID=Msa0654800;Name=Msa0654800
chr4_3 mRNA 63159459 63167960 63159459 ID=Msa0654800-mRNA-1;Parent=Msa0654800;Name=Msa0654800-mRNA-1;_AED=0.01;_eAED=0.01;_QI=276|1|1|1|0.83|0.71|7|274|151
chr4_3 exon 63159459 63159783 63159459 ID=Msa0654800-mRNA-1:exon:17707;Parent=Msa0654800-mRNA-1
chr4_3 exon 63159872 63159952 63159872 ID=Msa0654800-mRNA-1:exon:17706;Parent=Msa0654800-mRNA-1
chr4_3 exon 63160933 63160977 63160933 ID=Msa0654800-mRNA-1:exon:17705;Parent=Msa0654800-mRNA-1
chr4_3 exon 63161241 63161298 63161241 ID=Msa0654800-mRNA-1:exon:17704;Parent=Msa0654800-mRNA-1
chr4_3 exon 63161962 63162117 63161962 ID=Msa0654800-mRNA-1:exon:17703;Parent=Msa0654800-mRNA-1
chr4_3 exon 63162618 63162737 63162618 ID=Msa0654800-mRNA-1:exon:17702;Parent=Msa0654800-mRNA-1
chr4_3 exon 63167740 63167960 63167740 ID=Msa0654800-mRNA-1:exon:17701;Parent=Msa0654800-mRNA-1
chr4_3 five_prime_UTR 63167740 63167960 63167740 ID=Msa0654800-mRNA-1:five_prime_utr;Parent=Msa0654800-mRNA-1
chr4_3 five_prime_UTR 63162683 63162737 63162683 ID=Msa0654800-mRNA-1:five_prime_utr;Parent=Msa0654800-mRNA-1
chr4_3 CDS 63162618 63162682 63162618 ID=Msa0654800-mRNA-1:cds;Parent=Msa0654800-mRNA-1
chr4_3 CDS 63161962 63162117 63161962 ID=Msa0654800-mRNA-1:cds;Parent=Msa0654800-mRNA-1
chr4_3 CDS 63161241 63161298 63161241 ID=Msa0654800-mRNA-1:cds;Parent=Msa0654800-mRNA-1
chr4_3 CDS 63160933 63160977 63160933 ID=Msa0654800-mRNA-1:cds;Parent=Msa0654800-mRNA-1
chr4_3 CDS 63159872 63159952 63159872 ID=Msa0654800-mRNA-1:cds;Parent=Msa0654800-mRNA-1
chr4_3 CDS 63159733 63159783 63159733 ID=Msa0654800-mRNA-1:cds;Parent=Msa0654800-mRNA-1
chr4_3 three_prime_UTR 63159459 63159732 63159459 ID=Msa0654800-mRNA-1:three_prime_utr;Parent=Msa0654800-mRNA-1
Gene Sequence

>Msa0654800

ATGGCGAAAAAAGCTAAAGCCTCTCACTCTCAAAAGAACGCTTCTTCTTCGGCCTCCACCTCCGGGAAACTAGTGTTGGCGATCAAATCGAATGAGGGAATGAAGAGATCGTTGCGGCAGACTAAGTCAAGAGACTTAACCAAAGCAGTGCAAAAAAAGAACAAGCAAAAGATTGATGCTAAGAAGCCGAAGAAACCCCCCACTGCTTTCTTCTACTTCTTGGAGGATTTTCGGAAAGAGTTTAAAGATCAGAATCCAGATGTTAAGTCAATGCGTGATATCGGCAAGGCATGCGGAGAGAAGTGGAAAACAATGACTTTTGAGGAAAAAGTTCAATACTATGATATAGCAACAGAGAAACGTGCAGAATTTGATAGAGCAACAACAGAGTATAACAAGAAAATGGAAAGCGGTGAGTATGAAGAAACTGATGAGGAGTCAGAGTATGACGAGTAA
Protein sequence

>Msa0654800

MAKKAKASHSQKNASSSASTSGKLVLAIKSNEGMKRSLRQTKSRDLTKAVQKKNKQKIDAKKPKKPPTAFFYFLEDFRKEFKDQNPDVKSMRDIGKACGEKWKTMTFEEKVQYYDIATEKRAEFDRATTEYNKKMESGEYEETDEESEYDE*