AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0663180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663180 MtrunA17_Chr2g0281191 96.013 903 20 5 3 905 11 897 0.0 1765
Msa0663180 MtrunA17_Chr3g0107701 41.440 847 403 20 37 825 17 828 0.0 556
Msa0663180 MtrunA17_Chr4g0012861 51.701 588 214 13 315 851 270 838 0.0 551
Msa0663180 MtrunA17_Chr4g0012861 38.129 139 60 3 22 144 4 132 5.64e-23 105
Msa0663180 MtrunA17_Chr5g0432721 39.781 548 231 12 321 825 283 774 1.11e-103 340
Msa0663180 MtrunA17_Chr5g0432721 44.898 98 43 2 24 120 6 93 1.75e-19 94.0
Msa0663180 MtrunA17_Chr7g0244871 67.391 92 30 0 353 444 6 97 8.23e-40 142
Msa0663180 MtrunA17_Chr7g0251891 39.394 132 71 3 359 486 16 142 3.69e-20 89.7
Msa0663180 MtrunA17_Chr7g0237841 41.379 87 50 1 359 444 623 709 2.60e-15 80.5
Msa0663180 MtrunA17_Chr8g0345771 38.182 110 60 4 359 462 171 278 4.08e-14 76.3
Msa0663180 MtrunA17_Chr1g0178071 35.484 124 72 4 342 459 58 179 8.36e-14 73.6
Msa0663180 MtrunA17_Chr7g0276471 38.679 106 57 4 359 458 117 220 2.10e-13 73.6
Msa0663180 MtrunA17_Chr7g0266821 41.000 100 52 5 364 459 65 161 8.81e-13 70.1
Msa0663180 MtrunA17_Chr1g0198661 33.813 139 72 5 359 479 191 327 4.19e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663180 AT4G32010.2 42.152 790 366 16 20 791 3 719 0.0 562
Msa0663180 AT4G32010.1 41.940 794 366 17 20 791 3 723 0.0 556
Msa0663180 AT2G30470.1 49.301 501 233 5 308 792 243 738 7.60e-145 449
Msa0663180 AT2G30470.1 48.485 99 40 2 22 119 9 97 6.43e-21 99.0
Msa0663180 AT4G21550.3 40.280 571 266 17 22 576 15 526 9.95e-118 370
Msa0663180 AT4G21550.1 40.472 593 274 18 24 600 17 546 3.56e-114 366
Msa0663180 AT4G21550.1 47.020 151 51 4 682 832 541 662 1.83e-21 100
Msa0663180 AT4G21550.2 40.000 555 258 17 24 562 17 512 9.83e-112 353
Msa0663180 AT3G26790.1 41.346 104 60 1 359 461 91 194 2.92e-19 90.1
Msa0663180 AT3G24650.1 35.172 145 76 4 322 458 538 672 7.60e-16 82.8
Msa0663180 AT2G36080.4 39.815 108 56 4 359 459 37 142 4.78e-15 74.3
Msa0663180 AT2G36080.2 39.815 108 56 4 359 459 37 142 4.78e-15 74.3
Msa0663180 AT5G06250.5 37.391 115 56 4 359 459 45 157 6.68e-15 76.3
Msa0663180 AT5G06250.4 37.391 115 56 4 359 459 45 157 7.16e-15 76.6
Msa0663180 AT2G36080.1 39.815 108 56 4 359 459 37 142 7.24e-15 75.9
Msa0663180 AT2G36080.3 39.815 108 56 4 359 459 37 142 7.32e-15 75.5
Msa0663180 AT5G06250.2 37.391 115 56 4 359 459 45 157 8.86e-15 76.3
Msa0663180 AT5G06250.3 37.391 115 56 4 359 459 45 157 9.56e-15 75.9
Msa0663180 AT5G06250.1 37.391 115 56 4 359 459 45 157 1.12e-14 75.9
Msa0663180 AT1G28300.1 39.000 100 59 2 345 443 157 255 6.49e-14 74.7
Msa0663180 AT4G01500.1 40.449 89 50 2 359 446 35 121 2.90e-13 72.4
Msa0663180 AT3G11580.4 36.207 116 57 4 359 459 28 141 7.55e-13 69.7
Msa0663180 AT3G11580.2 36.207 116 57 4 359 459 28 141 7.55e-13 69.7
Msa0663180 AT3G11580.5 36.207 116 57 4 359 459 28 141 7.55e-13 69.7
Msa0663180 AT2G46870.1 39.560 91 50 3 359 446 34 122 1.17e-12 70.5
Msa0663180 AT3G11580.1 36.207 116 57 4 359 459 28 141 3.67e-12 68.2
Msa0663180 AT3G11580.3 36.207 116 57 4 359 459 28 141 4.34e-12 69.3
Msa0663180 AT3G25730.1 39.362 94 49 4 359 446 182 273 4.75e-12 68.9
Msa0663180 AT1G25560.1 34.746 118 63 5 359 464 194 309 6.07e-12 68.9

Find 262 sgRNAs with CRISPR-Local

Find 790 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATCACTCTCGTACCTTTC+TGG 0.160003 4_4:+1856274 None:intergenic
AATGAAAGAAATGGTCAAAT+TGG 0.226571 4_4:-1861020 Msa0663180:CDS
CTTTCATTTGGGGATGAATA+AGG 0.231314 4_4:+1861035 None:intergenic
TTGTCGCCTGGTTCAGATTC+TGG 0.241849 4_4:-1855265 Msa0663180:CDS
ATTTGACCATTTCTTTCATT+TGG 0.245941 4_4:+1861023 None:intergenic
AGATCAATTTGGCCTTTAAA+TGG 0.248134 4_4:+1855316 None:intergenic
ATCTCTTACAAATCGTTTAT+CGG 0.260733 4_4:-1861553 Msa0663180:CDS
TTTGACCATTTCTTTCATTT+GGG 0.271314 4_4:+1861024 None:intergenic
TGTCTGGAATATCAGCTAAT+TGG 0.273177 4_4:-1861317 Msa0663180:CDS
ATAAAAGAGGGGTAGGAAAA+AGG 0.284887 4_4:-1854912 Msa0663180:three_prime_UTR
GGATATTTCAGTTCCGCTTC+TGG 0.286219 4_4:-1859435 Msa0663180:CDS
TACATTCTGCTGTTGTTATT+CGG 0.300641 4_4:+1859412 None:intergenic
AACCCTTCAGGCTGAGAAAT+TGG 0.301947 4_4:+1859493 None:intergenic
GCTGGATATTGAGATCAATT+TGG 0.303683 4_4:+1855305 None:intergenic
ATCATTACCCTCCTTGTTCA+TGG 0.305949 4_4:+1855381 None:intergenic
AATGGTCAAATTGGGGTAAC+TGG 0.309222 4_4:-1861011 Msa0663180:CDS
GCCAGTGATGCTGGGCGAAT+TGG 0.316030 4_4:-1860632 Msa0663180:CDS
CAGACTGGGTGCTTGCTTCC+AGG 0.319580 4_4:+1861470 None:intergenic
TACCCTCCTTGTTCATGGTT+GGG 0.322992 4_4:+1855386 None:intergenic
GCCTGAAGGGAGGTTGGTTA+TGG 0.323362 4_4:-1858493 Msa0663180:CDS
TCATCCGTGTCTCCATTTAA+AGG 0.326774 4_4:-1855328 Msa0663180:CDS
AATAACTTTGACAAAATATA+TGG 0.331049 4_4:-1861387 Msa0663180:CDS
ATCTGTCGCTTAGGTTGAAT+TGG 0.334190 4_4:-1857739 Msa0663180:intron
AGCTAATTGGAATGTCAAAC+TGG 0.337122 4_4:-1861304 Msa0663180:CDS
GTGCACTTCTTCCAGCAAAA+TGG 0.337367 4_4:-1856321 Msa0663180:CDS
ATGAAAGAAATGGTCAAATT+GGG 0.345350 4_4:-1861019 Msa0663180:CDS
GGCCCTTTCCACTAGGCGGC+TGG 0.351565 4_4:+1855620 None:intergenic
CCAGTGATGCTGGGCGAATT+GGG 0.353628 4_4:-1860631 Msa0663180:CDS
GTGCATGTCTGCTTATGCTT+GGG 0.356470 4_4:+1855598 None:intergenic
TCCTGATCATGCTGAAGCTT+TGG 0.362667 4_4:-1855761 Msa0663180:CDS
CCTGAAGGGAGGTTGGTTAT+GGG 0.369927 4_4:-1858492 Msa0663180:CDS
TTTGTTGAAGTGAGAGAAAT+GGG 0.377737 4_4:+1864741 None:intergenic
TTTCAGATGAAGGCAGTTGC+TGG 0.379421 4_4:+1855458 None:intergenic
CTTAGCAACGGTGTTATTCA+TGG 0.385576 4_4:-1855106 Msa0663180:CDS
TCTTCTCACGCCGTAACATA+AGG 0.386896 4_4:+1855536 None:intergenic
AAGTAACACCTTTGTGTTGT+TGG 0.387030 4_4:-1862459 Msa0663180:CDS
AATTGGCTGATCCTAGTTCC+TGG 0.387306 4_4:-1857722 Msa0663180:CDS
CCCATAACCAACCTCCCTTC+AGG 0.389700 4_4:+1858492 None:intergenic
GTGGGTGTTTAGTTGTGGCC+TGG 0.391891 4_4:+1855677 None:intergenic
TTACAGGATGCTCCGGTGCT+TGG 0.393729 4_4:-1856842 Msa0663180:intron
GTTGGTTATGGGATTTAGAA+AGG 0.394057 4_4:-1858481 Msa0663180:CDS
CCCAATTCGCCCAGCATCAC+TGG 0.395558 4_4:+1860631 None:intergenic
ACCTTTGTGTTGTTGGATCC+AGG 0.400804 4_4:-1862452 Msa0663180:CDS
GTCAGTTGTTGCCACGGTAT+TGG 0.401190 4_4:-1860860 Msa0663180:CDS
TGTGGCCACGGCAGGTTAGA+TGG 0.401999 4_4:+1861582 None:intergenic
ACAATGCTTGGGACATGATT+AGG 0.404239 4_4:+1857519 None:intergenic
TTACCCTCCTTGTTCATGGT+TGG 0.412271 4_4:+1855385 None:intergenic
TACAGGATGCTCCGGTGCTT+GGG 0.413480 4_4:-1856841 Msa0663180:intron
GGACATGTTCAGATAATTCA+TGG 0.414352 4_4:-1856300 Msa0663180:CDS
TTCCTTGCATAATAGTAATA+CGG 0.417300 4_4:-1855419 Msa0663180:CDS
TTGGCCCAGGTGTACTGAAT+TGG 0.418132 4_4:-1860841 Msa0663180:CDS
CGCAGTAACATTTAGCCGGT+TGG 0.424036 4_4:-1858517 Msa0663180:intron
GGTACGGTGAGCTCTCAAAA+AGG 0.425203 4_4:+1854775 None:intergenic
GACAATTCTTCTTCTCGCTC+TGG 0.431144 4_4:+1855283 None:intergenic
GATTCAACTTCTCAACCGTT+TGG 0.433122 4_4:-1861068 Msa0663180:CDS
ACTTGCAAATCTAGCAATCC+TGG 0.433506 4_4:-1855725 Msa0663180:CDS
TTGCTTATGAACGGTAATAC+AGG 0.433536 4_4:-1861267 Msa0663180:intron
CCTTCAATCACCACAATGCT+TGG 0.436508 4_4:+1857507 None:intergenic
CTTTGAGTTTGAGGAATATG+AGG 0.436772 4_4:-1857484 Msa0663180:intron
ACTTTGAGTGCCAGTGATGC+TGG 0.442164 4_4:-1860641 Msa0663180:CDS
CATCTAGGCAAGCAGTTTAG+TGG 0.442863 4_4:-1860963 Msa0663180:CDS
GGTGCTTGCTTCCAGGGTAC+AGG 0.444210 4_4:+1861477 None:intergenic
CCTTTAGAGTATGAGGCTGT+TGG 0.444476 4_4:+1861093 None:intergenic
GAATCTTCCTTTAGAGTATG+AGG 0.445204 4_4:+1861086 None:intergenic
ACACGTTCATAGACAAAGAC+TGG 0.448302 4_4:+1855050 None:intergenic
CATTTACCTCTTGACTCATC+AGG 0.448985 4_4:-1860933 Msa0663180:CDS
TGTGCATGTCTGCTTATGCT+TGG 0.449862 4_4:+1855597 None:intergenic
AAATCCTTTGCCATCCGATC+AGG 0.452416 4_4:-1858454 Msa0663180:intron
TGGGTGTTTAGTTGTGGCCT+GGG 0.452762 4_4:+1855678 None:intergenic
CAGTAGTCATAATGCTGATA+AGG 0.453305 4_4:-1855080 Msa0663180:CDS
TGCTGGGCGAATTGGGCGCT+TGG 0.455987 4_4:-1860624 Msa0663180:CDS
TCAACTAGAGAATGCACATC+TGG 0.456237 4_4:+1861417 None:intergenic
TTCATGTTTGTACATAAAAG+AGG 0.456618 4_4:-1854925 Msa0663180:three_prime_UTR
TCATCCCCAAATGAAAGAAA+TGG 0.456820 4_4:-1861029 Msa0663180:CDS
TGATCATGCTGAAGCTTTGG+AGG 0.457477 4_4:-1855758 Msa0663180:CDS
TCAACATTTGACCAGGAACT+AGG 0.459457 4_4:+1857711 None:intergenic
CTTAAAATCCTCGATGCAAA+AGG 0.461243 4_4:-1859466 Msa0663180:CDS
GTGAAATTCATATTGGTGCT+AGG 0.463726 4_4:-1855029 Msa0663180:exon
CAACAAACTCCACCTCATCT+AGG 0.464917 4_4:-1860978 Msa0663180:CDS
TGGTCAAATGTTGATAAGTC+AGG 0.467081 4_4:-1857702 Msa0663180:CDS
GGAATGTCAAACTGGGTTCA+AGG 0.467906 4_4:-1861296 Msa0663180:CDS
ATTCTTCTTCTCGCTCTGGC+TGG 0.467907 4_4:+1855287 None:intergenic
TTAGTTGTGGCCTGGGAAGA+TGG 0.468284 4_4:+1855685 None:intergenic
AATTAAGTAGAAACATTTCA+AGG 0.469189 4_4:+1854690 None:intergenic
GCAAACAATGCAAGAGCAGC+CGG 0.469885 4_4:+1855645 None:intergenic
GCAACAACTGACTTCTTCCT+CGG 0.470752 4_4:+1860871 None:intergenic
TGACTCATCAGGTGAAGCTC+AGG 0.473085 4_4:-1860922 Msa0663180:CDS
TGGAGTCAGTTAGCTGGATC+AGG 0.473225 4_4:-1861501 Msa0663180:CDS
CCAAGCATTGTGGTGATTGA+AGG 0.474053 4_4:-1857507 Msa0663180:CDS
ATGAGGAATGAGGACAAATC+AGG 0.474622 4_4:-1861134 Msa0663180:CDS
ACCTCCCTTCAGGCTCCAAC+CGG 0.476212 4_4:+1858502 None:intergenic
TGAACGTGTGAAATTCATAT+TGG 0.477324 4_4:-1855036 Msa0663180:exon
TTATCACTAGTGAAAATAGA+TGG 0.477763 4_4:+1856815 None:intergenic
CCACCAATTTCTCAGCCTGA+AGG 0.479735 4_4:-1859496 Msa0663180:CDS
TCCAAAGCTTCAGCATGATC+AGG 0.479989 4_4:+1855760 None:intergenic
CTCAACTCTGTGATCGATGC+GGG 0.481808 4_4:-1864460 Msa0663180:intron
ATCCAGCCGCCTAGTGGAAA+GGG 0.481833 4_4:-1855622 Msa0663180:CDS
GATAATGAAGCTAATAAGAC+TGG 0.483266 4_4:-1857856 Msa0663180:CDS
ACTCAAACGCTTCTGGTTGG+AGG 0.485042 4_4:-1862662 Msa0663180:CDS
GTTTCCGTACCCTTATGTTA+CGG 0.488608 4_4:-1855546 Msa0663180:CDS
TGATTTACGTAGGGAAATCA+TGG 0.489278 4_4:-1854838 Msa0663180:three_prime_UTR
CCATTCAAACCTGAATTACA+AGG 0.491131 4_4:+1855932 None:intergenic
CTGGATCAGGACCTGTACCC+TGG 0.491579 4_4:-1861488 Msa0663180:CDS
GAAGCTAATAAGACTGGAAA+CGG 0.491637 4_4:-1857850 Msa0663180:CDS
TCTGGTACTGGAGATTCATC+AGG 0.492385 4_4:-1855172 Msa0663180:CDS
TCAAGCAAAATTTCAGATGA+AGG 0.493848 4_4:+1855448 None:intergenic
GGTCTACTGCTAAGAAAGGT+TGG 0.494594 4_4:-1864505 Msa0663180:CDS
GTCACCTGCTTGCAACTGCA+TGG 0.495052 4_4:+1859357 None:intergenic
GAAAATGAAGGCCACTAAGC+AGG 0.495097 4_4:-1855785 Msa0663180:CDS
GATTGAAGGCTTTGAGTTTG+AGG 0.495120 4_4:-1857493 Msa0663180:CDS
TGTTGCCACGGTATTGGCCC+AGG 0.495577 4_4:-1860854 Msa0663180:CDS
TAGCTCCAATTCAGTACACC+TGG 0.498477 4_4:+1860836 None:intergenic
ATAAAGATTGTGGCCACGGC+AGG 0.499237 4_4:+1861574 None:intergenic
CTTCTCACGCCGTAACATAA+GGG 0.500342 4_4:+1855537 None:intergenic
ATGATCAGGATCCTGCTTAG+TGG 0.500883 4_4:+1855774 None:intergenic
AGACTGGGTGCTTGCTTCCA+GGG 0.501160 4_4:+1861471 None:intergenic
GGAGGCTCTCCCATCTTCCC+AGG 0.502386 4_4:-1855695 Msa0663180:CDS
TGAAATTCATATTGGTGCTA+GGG 0.503538 4_4:-1855028 Msa0663180:three_prime_UTR
CTGAGAAATTGGTGGGAAGT+AGG 0.504512 4_4:+1859504 None:intergenic
GAGCAGCCGGGTCTATGTCG+TGG 0.505284 4_4:+1855658 None:intergenic
ACAAAATATATGGCAATGAA+AGG 0.507284 4_4:-1861377 Msa0663180:CDS
TTCAGATGAAGGCAGTTGCT+GGG 0.508534 4_4:+1855459 None:intergenic
TCCTTGCATAATAGTAATAC+GGG 0.509224 4_4:-1855418 Msa0663180:CDS
CATCCAGCCGCCTAGTGGAA+AGG 0.510624 4_4:-1855623 Msa0663180:CDS
GAGACATGTCTGGCAAAAGT+TGG 0.514952 4_4:-1861521 Msa0663180:CDS
TTTGTTGTATTGCAGGAATG+AGG 0.515892 4_4:-1861151 Msa0663180:intron
TTTGTACATAAAAGAGGGGT+AGG 0.516099 4_4:-1854919 Msa0663180:three_prime_UTR
ATCAGGTAGTCAGTCACAGC+AGG 0.516556 4_4:-1855155 Msa0663180:CDS
CCAACAGCCTCATACTCTAA+AGG 0.524975 4_4:-1861093 Msa0663180:CDS
ACTTTGTTGAACTCTGGTAC+TGG 0.527710 4_4:-1855184 Msa0663180:CDS
ATACATAGCAAAAGAAGCAC+TGG 0.528619 4_4:-1857679 Msa0663180:CDS
CAGCAGACTTTGTTGAACTC+TGG 0.530003 4_4:-1855190 Msa0663180:CDS
TCCACTCAAACGCTTCTGGT+TGG 0.530665 4_4:-1862665 Msa0663180:CDS
GTAAAGCATTCAATTCCTCC+TGG 0.532051 4_4:+1862434 None:intergenic
CTTGCAAATCTAGCAATCCT+GGG 0.532774 4_4:-1855724 Msa0663180:CDS
CTTCAATCACCACAATGCTT+GGG 0.534367 4_4:+1857508 None:intergenic
TGCTTGGGGCCCTTTCCACT+AGG 0.534401 4_4:+1855613 None:intergenic
ATGAACAAGGAGGGTAATGA+TGG 0.534494 4_4:-1855379 Msa0663180:CDS
AACAACGACGAATGAAAGAG+AGG 0.538280 4_4:+1864674 None:intergenic
GAGAGATATAGAGACATGTC+TGG 0.539014 4_4:-1861531 Msa0663180:CDS
TCATGTTTGTACATAAAAGA+GGG 0.539130 4_4:-1854924 Msa0663180:three_prime_UTR
GAATTGTGAGACTTGTAGAA+AGG 0.540816 4_4:-1862640 Msa0663180:intron
CACCAATTTCTCAGCCTGAA+GGG 0.542196 4_4:-1859495 Msa0663180:CDS
AATGGAGCTGAATGAGGTAG+TGG 0.544122 4_4:-1854815 Msa0663180:three_prime_UTR
CAACAACTGACTTCTTCCTC+GGG 0.544517 4_4:+1860872 None:intergenic
GTGAAGCTCAGGTTCGCAAT+GGG 0.546771 4_4:-1860911 Msa0663180:CDS
CTTGCAAAGCTTGTTGAAGT+GGG 0.549392 4_4:-1854990 Msa0663180:three_prime_UTR
CAGTCCATGCAGTTGCAAGC+AGG 0.549929 4_4:-1859361 Msa0663180:CDS
GAATGTCAAACTGGGTTCAA+GGG 0.552101 4_4:-1861295 Msa0663180:CDS
GAGAATGCACATCTGGAGGC+TGG 0.553030 4_4:+1861424 None:intergenic
TAGTTGTGGCCTGGGAAGAT+GGG 0.553270 4_4:+1855686 None:intergenic
TGCATGTCTGCTTATGCTTG+GGG 0.556813 4_4:+1855599 None:intergenic
CGAGAAGAAGAATTGTCGCC+TGG 0.557693 4_4:-1855277 Msa0663180:CDS
AGAGATAAAGATTGTGGCCA+CGG 0.559976 4_4:+1861570 None:intergenic
ATTCTGACTGTAAAGACTTG+AGG 0.560124 4_4:-1864526 Msa0663180:CDS
ATAATTCATGGGATCCAGAA+AGG 0.562018 4_4:-1856288 Msa0663180:intron
GTTGGAGCCTGAAGGGAGGT+TGG 0.564406 4_4:-1858499 Msa0663180:CDS
ATTAAGTAGAAACATTTCAA+GGG 0.566789 4_4:+1854691 None:intergenic
AAAAGTTGGAGTCAGTTAGC+TGG 0.568196 4_4:-1861507 Msa0663180:CDS
AGAAGCTGAATTGAACAGAC+TGG 0.568636 4_4:+1861455 None:intergenic
TCCGTAGTTCATATCCACTT+CGG 0.569611 4_4:-1854958 Msa0663180:three_prime_UTR
AACTGCTTGCCTAGATGAGG+TGG 0.570136 4_4:+1860969 None:intergenic
TCCAACCAGAAGCGTTTGAG+TGG 0.572844 4_4:+1862664 None:intergenic
TGCTTGGGACATGATTAGGA+GGG 0.573196 4_4:+1857523 None:intergenic
TAATAGAGCTGAAGATTACA+TGG 0.574564 4_4:-1857572 Msa0663180:CDS
AGCAGCCGGGTCTATGTCGT+GGG 0.575738 4_4:+1855659 None:intergenic
TTTAGCCGGTTGGAGCCTGA+AGG 0.576874 4_4:-1858507 Msa0663180:CDS
TTTCAATGTTGTTGATCAGG+TGG 0.578147 4_4:+1854754 None:intergenic
ATAGATGGCTTCCCAAGCAC+CGG 0.579291 4_4:+1856830 None:intergenic
CAATGCAGATATTACCTGAT+CGG 0.581192 4_4:+1858440 None:intergenic
GCAGATATTACCTGATCGGA+TGG 0.582173 4_4:+1858444 None:intergenic
ATGTCGTGGGTGTTTAGTTG+TGG 0.582924 4_4:+1855672 None:intergenic
TTGAGGTCTACTGCTAAGAA+AGG 0.582941 4_4:-1864509 Msa0663180:CDS
CCTTCAGGCTGAGAAATTGG+TGG 0.583560 4_4:+1859496 None:intergenic
GGTGAAGCTCAGGTTCGCAA+TGG 0.584201 4_4:-1860912 Msa0663180:CDS
CTTGTGTTACCAGAAAATAG+TGG 0.585786 4_4:+1854873 None:intergenic
AACTGAAGAAGAAGAAGCCA+TGG 0.586971 4_4:+1864604 None:intergenic
TAAGGTACAGATAAACCAAA+CGG 0.588759 4_4:+1861053 None:intergenic
TCATGGAATGGAGCTGAATG+AGG 0.589024 4_4:-1854821 Msa0663180:three_prime_UTR
GATCATGCTGAAGCTTTGGA+GGG 0.590184 4_4:-1855757 Msa0663180:CDS
ACCCGTATTACTATTATGCA+AGG 0.591046 4_4:+1855417 None:intergenic
GCAGGTAGGAGATGTTGTGA+GGG 0.592609 4_4:-1855137 Msa0663180:CDS
AGGGACATGTTGCTTATGAA+CGG 0.593802 4_4:-1861276 Msa0663180:CDS
AATCCTCGATGCAAAAGGAA+AGG 0.594386 4_4:-1859461 Msa0663180:CDS
TACATAGCAAAAGAAGCACT+GGG 0.595326 4_4:-1857678 Msa0663180:CDS
AGCAGTTTCCAAGAAAATGA+AGG 0.595741 4_4:-1855797 Msa0663180:CDS
TTGACCATTTCTTTCATTTG+GGG 0.596631 4_4:+1861025 None:intergenic
TTGCAAAGCTTGTTGAAGTG+GGG 0.600330 4_4:-1854989 Msa0663180:three_prime_UTR
GCTGGAAGAAGTGCACATGC+TGG 0.600458 4_4:+1856328 None:intergenic
CAGTTGCAAGCAGGTGACAC+AGG 0.601495 4_4:-1859352 Msa0663180:intron
TACGTAGGGAAATCATGGAA+TGG 0.601921 4_4:-1854833 Msa0663180:three_prime_UTR
GTTTGCATCCAGCCGCCTAG+TGG 0.603172 4_4:-1855628 Msa0663180:CDS
CAAACAATGCAAGAGCAGCC+GGG 0.603823 4_4:+1855646 None:intergenic
CTTCCTCGGGCATCTGCTCG+AGG 0.605073 4_4:+1860885 None:intergenic
ACAACGACGAATGAAAGAGA+GGG 0.605449 4_4:+1864675 None:intergenic
ACACCACCAGAATCTGAACC+AGG 0.607711 4_4:+1855259 None:intergenic
ATTACCTGATCGGATGGCAA+AGG 0.607719 4_4:+1858450 None:intergenic
CTCAGCCATCTAACCTGCCG+TGG 0.607811 4_4:-1861587 Msa0663180:intron
ATGCACATCTGGAGGCTGGT+CGG 0.608646 4_4:+1861428 None:intergenic
TGACTTATCAACATTTGACC+AGG 0.608800 4_4:+1857704 None:intergenic
TGTTGTTATTCGGCCAGAAG+CGG 0.609669 4_4:+1859422 None:intergenic
GACATGTTCAGATAATTCAT+GGG 0.609897 4_4:-1856299 Msa0663180:CDS
GCCGGTTGGAGCCTGAAGGG+AGG 0.610013 4_4:-1858503 Msa0663180:CDS
TAGTAGCCCAACCATGAACA+AGG 0.610538 4_4:-1855392 Msa0663180:CDS
TTAGCCGGTTGGAGCCTGAA+GGG 0.610617 4_4:-1858506 Msa0663180:CDS
ATGCTTGGGACATGATTAGG+AGG 0.611515 4_4:+1857522 None:intergenic
CTTCAGGCTGAGAAATTGGT+GGG 0.611961 4_4:+1859497 None:intergenic
CACGTTCATAGACAAAGACT+GGG 0.613315 4_4:+1855051 None:intergenic
TGAAAGAAATGGTCAAATTG+GGG 0.613362 4_4:-1861018 Msa0663180:CDS
CTTTGAGTGCCAGTGATGCT+GGG 0.613991 4_4:-1860640 Msa0663180:CDS
TCTTGCAAAGCTTGTTGAAG+TGG 0.614065 4_4:-1854991 Msa0663180:three_prime_UTR
TTTGTAAGAGATAAAGATTG+TGG 0.616956 4_4:+1861564 None:intergenic
GAAGAAGTCAGTTGTTGCCA+CGG 0.618200 4_4:-1860866 Msa0663180:CDS
CTAAACTGCTTGCCTAGATG+AGG 0.618575 4_4:+1860966 None:intergenic
TGAATAGTAAGACGCCGAAG+TGG 0.619978 4_4:+1854944 None:intergenic
CATAGCAGTAGTAGTAACCA+TGG 0.622979 4_4:-1864621 Msa0663180:exon
GCCGAAGTGGATATGAACTA+CGG 0.623117 4_4:+1854957 None:intergenic
TCGATGCAAAAGGAAAGGAA+TGG 0.623875 4_4:-1859456 Msa0663180:CDS
ATTACATGGCAAGAAGCTCA+AGG 0.624749 4_4:-1857558 Msa0663180:CDS
AGCAGGTAGGAGATGTTGTG+AGG 0.624795 4_4:-1855138 Msa0663180:CDS
CTTGGGACATGATTAGGAGG+GGG 0.628705 4_4:+1857525 None:intergenic
AGCTCCAATTCAGTACACCT+GGG 0.629096 4_4:+1860837 None:intergenic
CGACCTCGAGCAGATGCCCG+AGG 0.632234 4_4:-1860888 Msa0663180:CDS
ACATCATAGTGATTTACGTA+GGG 0.632534 4_4:-1854847 Msa0663180:three_prime_UTR
GCTCAACTCTGTGATCGATG+CGG 0.632790 4_4:-1864461 Msa0663180:CDS
GGTAGTCAGTCACAGCAGGT+AGG 0.633855 4_4:-1855151 Msa0663180:CDS
GCTTCACCTGATGAGTCAAG+AGG 0.634530 4_4:+1860927 None:intergenic
GCTAATTGGAATGTCAAACT+GGG 0.636082 4_4:-1861303 Msa0663180:CDS
TATTGCAGGAATGAGGAATG+AGG 0.637424 4_4:-1861144 Msa0663180:intron
TTGGCCTTTAAATGGAGACA+CGG 0.638401 4_4:+1855324 None:intergenic
AAAGGTTGGAGACTTCGCAC+TGG 0.641834 4_4:-1864491 Msa0663180:CDS
TTGCAAATCTAGCAATCCTG+GGG 0.642083 4_4:-1855723 Msa0663180:CDS
TAATCATGTCCCAAGCATTG+TGG 0.643328 4_4:-1857517 Msa0663180:CDS
AATGTGAAGATTGTCTGAAG+TGG 0.644577 4_4:-1856360 Msa0663180:CDS
CATGTTTGTACATAAAAGAG+GGG 0.646204 4_4:-1854923 Msa0663180:three_prime_UTR
AGCCCAACCATGAACAAGGA+GGG 0.646404 4_4:-1855388 Msa0663180:CDS
GTTCTGATGATGATCCTCAC+CGG 0.646876 4_4:-1855357 Msa0663180:CDS
AACTGCATGGACTGTATGCA+TGG 0.646881 4_4:+1859370 None:intergenic
ATTCAAACCTGAATTACAAG+GGG 0.647708 4_4:+1855934 None:intergenic
CATTCAAACCTGAATTACAA+GGG 0.647900 4_4:+1855933 None:intergenic
ATGTTGTTGATCAGGTGGTA+CGG 0.648704 4_4:+1854759 None:intergenic
GCTTGGGACATGATTAGGAG+GGG 0.648870 4_4:+1857524 None:intergenic
ACTAGAGAATGCACATCTGG+AGG 0.649096 4_4:+1861420 None:intergenic
ATGGAGCTGAATGAGGTAGT+GGG 0.654269 4_4:-1854814 Msa0663180:three_prime_UTR
ATCGATCACAGAGTTGAGCT+AGG 0.654293 4_4:+1864465 None:intergenic
CACGCCGTAACATAAGGGTA+CGG 0.656740 4_4:+1855542 None:intergenic
GAAGCTGAATTGAACAGACT+GGG 0.665746 4_4:+1861456 None:intergenic
AAACACCCACGACATAGACC+CGG 0.669434 4_4:-1855664 Msa0663180:CDS
AGGGAAGTGAAGCTTAGCAA+CGG 0.671793 4_4:-1855118 Msa0663180:CDS
GAAATTCATATTGGTGCTAG+GGG 0.672820 4_4:-1855027 Msa0663180:three_prime_UTR
CACATGTAATGTCTGTCTAA+CGG 0.673914 4_4:-1855578 Msa0663180:CDS
TTGGGGCCCTTTCCACTAGG+CGG 0.682669 4_4:+1855616 None:intergenic
TCGCCTGGTTCAGATTCTGG+TGG 0.694439 4_4:-1855262 Msa0663180:CDS
GACATCATAGTGATTTACGT+AGG 0.696019 4_4:-1854848 Msa0663180:three_prime_UTR
ACATTTCAGCAGCAGCATCG+TGG 0.696358 4_4:+1855224 None:intergenic
GTACACCTGGGCCAATACCG+TGG 0.704903 4_4:+1860849 None:intergenic
TTTGTGTTGTTGGATCCAGG+AGG 0.707436 4_4:-1862449 Msa0663180:CDS
TCCTGGATCCAACAACACAA+AGG 0.713489 4_4:+1862451 None:intergenic
TAGCCCAACCATGAACAAGG+AGG 0.716754 4_4:-1855389 Msa0663180:CDS
TGCAAATCTAGCAATCCTGG+GGG 0.721871 4_4:-1855722 Msa0663180:CDS
TTCAAACCTGAATTACAAGG+GGG 0.743313 4_4:+1855935 None:intergenic
ACATAGCAAAAGAAGCACTG+GGG 0.799937 4_4:-1857677 Msa0663180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATAAAGTTTTGTTTTTT+CGG - chr4_4:1855037-1855056 Msa0663180:exon 10.0%
!! AAATTATAAGAAGATATCAA+AGG + chr4_4:1855840-1855859 None:intergenic 15.0%
!! TTTGATATCTTCTTATAATT+TGG - chr4_4:1855839-1855858 Msa0663180:intron 15.0%
!! TTGATATCTTCTTATAATTT+GGG - chr4_4:1855840-1855859 Msa0663180:intron 15.0%
!!! AGATACAAATAGTTTTAAAT+AGG - chr4_4:1856826-1856845 Msa0663180:CDS 15.0%
!! AATAACTTTGACAAAATATA+TGG - chr4_4:1858005-1858024 Msa0663180:intron 15.0%
!! TACTTATTAAGTAATTACAT+TGG - chr4_4:1858612-1858631 Msa0663180:intron 15.0%
!! AATTATGTATAAATCCATAT+CGG - chr4_4:1858666-1858685 Msa0663180:intron 15.0%
!!! TTTGTTGCATAATTTTTTTT+GGG + chr4_4:1859546-1859565 None:intergenic 15.0%
!!! TTTTGTTGCATAATTTTTTT+TGG + chr4_4:1859547-1859566 None:intergenic 15.0%
!! TTAAATATCATGAAAAAGTA+AGG + chr4_4:1859821-1859840 None:intergenic 15.0%
!! TTTGTCAAAAAAAAATAGAA+AGG + chr4_4:1861336-1861355 None:intergenic 15.0%
!! ATATTTCCTAATTACTATAA+AGG - chr4_4:1861364-1861383 Msa0663180:CDS 15.0%
!! AACTTTATACAAATAGATAT+AGG + chr4_4:1861456-1861475 None:intergenic 15.0%
!! ATATCTATTTGTATAAAGTT+CGG - chr4_4:1861456-1861475 Msa0663180:CDS 15.0%
!! AGCGTATTAATTTATATTAT+TGG + chr4_4:1862038-1862057 None:intergenic 15.0%
!!! TATTGATTGCATATTTATAT+AGG + chr4_4:1863339-1863358 None:intergenic 15.0%
!! TATAATAAATTGCTAAACAA+TGG - chr4_4:1863544-1863563 Msa0663180:intron 15.0%
!! ACAACTAATTAAAAATTGTT+TGG + chr4_4:1864746-1864765 None:intergenic 15.0%
!!! TTTTAATTAGTTGTTAAGTT+AGG - chr4_4:1864752-1864771 Msa0663180:five_prime_UTR 15.0%
!! TCAAATGGAAAAATAATTTG+CGG - chr4_4:1855408-1855427 Msa0663180:CDS 20.0%
!! TAATATATTTGTTTGAGTGT+AGG - chr4_4:1855432-1855451 Msa0663180:CDS 20.0%
!! AACCTAAAAAAAGAATCTTA+TGG + chr4_4:1856412-1856431 None:intergenic 20.0%
!!! AACAATCAATTTTTTACTGA+AGG + chr4_4:1856658-1856677 None:intergenic 20.0%
!! AAAACTATTTGTATCTAACA+TGG + chr4_4:1856822-1856841 None:intergenic 20.0%
!!! ATTGAAAATTGCTATTGTTA+CGG - chr4_4:1857340-1857359 Msa0663180:intron 20.0%
!! AGAAATCAACAAACAAAAAT+AGG + chr4_4:1857525-1857544 None:intergenic 20.0%
!! TCTTATTATTAAGACCTATT+TGG - chr4_4:1857733-1857752 Msa0663180:intron 20.0%
!!! AGATGAATCTTTTTATAACA+TGG - chr4_4:1858196-1858215 Msa0663180:intron 20.0%
!! CTTAATAAGTAGTAATTTGA+AGG + chr4_4:1858603-1858622 None:intergenic 20.0%
!! TTATTACAGAATTAGAACTA+GGG + chr4_4:1858714-1858733 None:intergenic 20.0%
!! CAGTAAATTCAATTTACTAT+GGG + chr4_4:1858897-1858916 None:intergenic 20.0%
!! ACAGTAAATTCAATTTACTA+TGG + chr4_4:1858898-1858917 None:intergenic 20.0%
!! AAAACTGCATTAATAAAATC+AGG - chr4_4:1859156-1859175 Msa0663180:intron 20.0%
!!! TTGTTGCATAATTTTTTTTG+GGG + chr4_4:1859545-1859564 None:intergenic 20.0%
!! TGATAATCTTAAGATATTCT+TGG - chr4_4:1860380-1860399 Msa0663180:intron 20.0%
!! TTTAGAAAACAGAAAACTTT+CGG + chr4_4:1860465-1860484 None:intergenic 20.0%
!!! TGCTTTGATATAGATTTTTT+TGG - chr4_4:1861204-1861223 Msa0663180:intron 20.0%
!!! GATATAGATTTTTTTGGATA+TGG - chr4_4:1861210-1861229 Msa0663180:intron 20.0%
!! TGAAATCAGAAATTACAAAA+GGG + chr4_4:1861249-1861268 None:intergenic 20.0%
!! TTGAAATCAGAAATTACAAA+AGG + chr4_4:1861250-1861269 None:intergenic 20.0%
!!! TTCAATTTTTATATGCTGTT+TGG - chr4_4:1861265-1861284 Msa0663180:intron 20.0%
!!! TCAATTTTTATATGCTGTTT+GGG - chr4_4:1861266-1861285 Msa0663180:intron 20.0%
!!! TTTTTTTTTGACAAAAGTTG+TGG - chr4_4:1861341-1861360 Msa0663180:CDS 20.0%
!! AACTATCCTTTATAGTAATT+AGG + chr4_4:1861373-1861392 None:intergenic 20.0%
!! CAAAAAGAAAAATATGTGAA+CGG + chr4_4:1861513-1861532 None:intergenic 20.0%
!! AAAGAGAAAAAACAACATAT+TGG - chr4_4:1861758-1861777 Msa0663180:intron 20.0%
!! AAGAGAAAAAACAACATATT+GGG - chr4_4:1861759-1861778 Msa0663180:intron 20.0%
!!! TATTTTCACTAGTGATAATA+TGG - chr4_4:1862582-1862601 Msa0663180:intron 20.0%
!!! ATTTTCACTAGTGATAATAT+GGG - chr4_4:1862583-1862602 Msa0663180:intron 20.0%
!! TAAATAACTCATCCTTAATT+CGG - chr4_4:1862607-1862626 Msa0663180:intron 20.0%
!!! TGTATTATTTTTATATGGTG+TGG - chr4_4:1862680-1862699 Msa0663180:CDS 20.0%
!! TTGGGAAAAAATATAAGAAA+TGG - chr4_4:1863183-1863202 Msa0663180:intron 20.0%
!! TATTGTTAATTGCATTTGTT+TGG - chr4_4:1863571-1863590 Msa0663180:intron 20.0%
!! ATTAAGTAGAAACATTTCAA+GGG + chr4_4:1864704-1864723 None:intergenic 20.0%
!! AATTAAGTAGAAACATTTCA+AGG + chr4_4:1864705-1864724 None:intergenic 20.0%
!!! TTTTATTTTCCCTGCAAATT+TGG - chr4_4:1855112-1855131 Msa0663180:CDS 25.0%
! AAACTTTATCCAAATTTGCA+GGG + chr4_4:1855124-1855143 None:intergenic 25.0%
! TAAACTTTATCCAAATTTGC+AGG + chr4_4:1855125-1855144 None:intergenic 25.0%
!! CTAATACAAAACTTTTGTAC+TGG + chr4_4:1855271-1855290 None:intergenic 25.0%
! ACTAACATTTGTCTATCAAA+TGG - chr4_4:1855393-1855412 Msa0663180:CDS 25.0%
!! TTTCTTTTTCTTTAGCAAGA+AGG + chr4_4:1855511-1855530 None:intergenic 25.0%
! ATTGGTAAAGAGACAAAAAA+AGG - chr4_4:1855550-1855569 Msa0663180:CDS 25.0%
! TTGGTAAAGAGACAAAAAAA+GGG - chr4_4:1855551-1855570 Msa0663180:CDS 25.0%
! AAAAGGGAACTTGATATAAA+AGG - chr4_4:1855567-1855586 Msa0663180:CDS 25.0%
! TACAAACTGTTACAATTCAT+GGG + chr4_4:1855670-1855689 None:intergenic 25.0%
! TTACAAACTGTTACAATTCA+TGG + chr4_4:1855671-1855690 None:intergenic 25.0%
! TTACAACAATTGATTGATCT+AGG - chr4_4:1855810-1855829 Msa0663180:intron 25.0%
! ATAATGAATGGAACTATGTT+GGG + chr4_4:1856128-1856147 None:intergenic 25.0%
! TTTGATATGAGATGTGTATT+TGG + chr4_4:1856252-1856271 None:intergenic 25.0%
! TAACAAATACAGAAAACCTA+GGG + chr4_4:1856305-1856324 None:intergenic 25.0%
! TTAACAAATACAGAAAACCT+AGG + chr4_4:1856306-1856325 None:intergenic 25.0%
!!! TGCCATAAGATTCTTTTTTT+AGG - chr4_4:1856407-1856426 Msa0663180:intron 25.0%
! AAATGGTTCATTGAACAATA+CGG + chr4_4:1856451-1856470 None:intergenic 25.0%
!!! GTTGCTTATCTTATTTCTTT+TGG - chr4_4:1856594-1856613 Msa0663180:intron 25.0%
!!! AAGGTGATCTATCTTTATTT+TGG - chr4_4:1856771-1856790 Msa0663180:intron 25.0%
! AAAAACTCTAACTTAGCTTA+GGG + chr4_4:1856854-1856873 None:intergenic 25.0%
! AAAAAACTCTAACTTAGCTT+AGG + chr4_4:1856855-1856874 None:intergenic 25.0%
! ATTCAAAAGAGTAACTAACA+GGG + chr4_4:1857617-1857636 None:intergenic 25.0%
! AAGATATTATTCAAGCATCA+TGG + chr4_4:1857717-1857736 None:intergenic 25.0%
! TTTGTAAGAGATAAAGATTG+TGG + chr4_4:1857831-1857850 None:intergenic 25.0%
! ATCTCTTACAAATCGTTTAT+CGG - chr4_4:1857839-1857858 Msa0663180:CDS 25.0%
! ACAAAATATATGGCAATGAA+AGG - chr4_4:1858015-1858034 Msa0663180:intron 25.0%
!! TTTTTCTTTTCCAATGATGA+GGG + chr4_4:1858047-1858066 None:intergenic 25.0%
!! ATTTTTCTTTTCCAATGATG+AGG + chr4_4:1858048-1858067 None:intergenic 25.0%
! ATCATTGGAAAAGAAAAATG+AGG - chr4_4:1858049-1858068 Msa0663180:intron 25.0%
!! ATCTTTTTATAACATGGAGA+TGG - chr4_4:1858202-1858221 Msa0663180:intron 25.0%
! TTTGACCATTTCTTTCATTT+GGG + chr4_4:1858371-1858390 None:intergenic 25.0%
! ATTTGACCATTTCTTTCATT+TGG + chr4_4:1858372-1858391 None:intergenic 25.0%
! AATGAAAGAAATGGTCAAAT+TGG - chr4_4:1858372-1858391 Msa0663180:intron 25.0%
! ATGAAAGAAATGGTCAAATT+GGG - chr4_4:1858373-1858392 Msa0663180:intron 25.0%
! GTTATTACAGAATTAGAACT+AGG + chr4_4:1858715-1858734 None:intergenic 25.0%
!! TCTATCTTTAGCTTAATGTA+TGG - chr4_4:1859275-1859294 Msa0663180:intron 25.0%
! CTATTTGGTCATAAATCATA+CGG + chr4_4:1859374-1859393 None:intergenic 25.0%
!!! TGTTGCATAATTTTTTTTGG+GGG + chr4_4:1859544-1859563 None:intergenic 25.0%
! TTCTTAAAGCATATGAACTT+TGG + chr4_4:1859605-1859624 None:intergenic 25.0%
!!! GTTCATATGCTTTAAGAAAA+TGG - chr4_4:1859607-1859626 Msa0663180:intron 25.0%
!! TTTACACACTCGTATTATTT+TGG - chr4_4:1859722-1859741 Msa0663180:intron 25.0%
!! TAGTCTTTTAATGTTTTGCA+TGG - chr4_4:1859787-1859806 Msa0663180:intron 25.0%
! AATATCATGAAAAAGTAAGG+TGG + chr4_4:1859818-1859837 None:intergenic 25.0%
! TGAGTAAAACTTAAGCTTAA+TGG - chr4_4:1860128-1860147 Msa0663180:intron 25.0%
! GAGTAAAACTTAAGCTTAAT+GGG - chr4_4:1860129-1860148 Msa0663180:intron 25.0%
!! GTTTCTTGTGTCTTTAAAAA+AGG - chr4_4:1860310-1860329 Msa0663180:intron 25.0%
! ATTATTTCGTTCCTTACAAA+GGG + chr4_4:1860348-1860367 None:intergenic 25.0%
! TAATTTGAGTGTACATTGTA+TGG - chr4_4:1860998-1861017 Msa0663180:CDS 25.0%
!! TCACATATTTTTCTTTTTGC+AGG - chr4_4:1861514-1861533 Msa0663180:CDS 25.0%
! ACGTCTAAAAATTGAAAATG+AGG - chr4_4:1861794-1861813 Msa0663180:intron 25.0%
!! TACTTAAAGAAAGCACATTT+AGG + chr4_4:1862013-1862032 None:intergenic 25.0%
! AATTAATACGCTTTCATCTT+CGG - chr4_4:1862046-1862065 Msa0663180:intron 25.0%
!!! GGCTAGTTTTATATAAACAA+AGG + chr4_4:1862089-1862108 None:intergenic 25.0%
!! TTACAAGTCTTATAACAACA+TGG + chr4_4:1862193-1862212 None:intergenic 25.0%
! TTATCACTAGTGAAAATAGA+TGG + chr4_4:1862580-1862599 None:intergenic 25.0%
!! TTTTCACTAGTGATAATATG+GGG - chr4_4:1862584-1862603 Msa0663180:intron 25.0%
! ATTTGATCAAAACCGAATTA+AGG + chr4_4:1862622-1862641 None:intergenic 25.0%
!! AATTAAGTTCTGATTTAGAC+TGG - chr4_4:1862928-1862947 Msa0663180:intron 25.0%
!! ATTAAGTTCTGATTTAGACT+GGG - chr4_4:1862929-1862948 Msa0663180:intron 25.0%
! TTCCTTGCATAATAGTAATA+CGG - chr4_4:1863973-1863992 Msa0663180:intron 25.0%
! TTCATGTTTGTACATAAAAG+AGG - chr4_4:1864467-1864486 Msa0663180:CDS 25.0%
! TCATGTTTGTACATAAAAGA+GGG - chr4_4:1864468-1864487 Msa0663180:CDS 25.0%
! TCAAGGGTTAAAAATCAATT+GGG + chr4_4:1864688-1864707 None:intergenic 25.0%
! TTCAAGGGTTAAAAATCAAT+TGG + chr4_4:1864689-1864708 None:intergenic 25.0%
TTTGTTGAAGTGAGAGAAAT+GGG + chr4_4:1854654-1854673 None:intergenic 30.0%
! TTTTGTTGAAGTGAGAGAAA+TGG + chr4_4:1854655-1854674 None:intergenic 30.0%
!!! AGAATTGAAGCATCGTTTTA+AGG + chr4_4:1854851-1854870 None:intergenic 30.0%
! AGTAGTATTTTCTTGTTCAC+CGG + chr4_4:1855360-1855379 None:intergenic 30.0%
GATGAAATGAAACTAACAAG+AGG - chr4_4:1855602-1855621 Msa0663180:CDS 30.0%
AATGAAACTAACAAGAGGAA+AGG - chr4_4:1855607-1855626 Msa0663180:CDS 30.0%
ACAAACTGTTACAATTCATG+GGG + chr4_4:1855669-1855688 None:intergenic 30.0%
ACTACTTAAGCTATATCTCT+AGG - chr4_4:1855925-1855944 Msa0663180:intron 30.0%
GATAATGAATGGAACTATGT+TGG + chr4_4:1856129-1856148 None:intergenic 30.0%
TAACAAACAGTGAACACAAA+TGG + chr4_4:1856468-1856487 None:intergenic 30.0%
! TGTTCACTGTTTGTTAATGT+TGG - chr4_4:1856472-1856491 Msa0663180:intron 30.0%
!!! TTAGTTCTGCTTTTGAAGAA+GGG - chr4_4:1856688-1856707 Msa0663180:intron 30.0%
! TACCAGAATAACATTTTTGC+GGG + chr4_4:1856989-1857008 None:intergenic 30.0%
! CTACCAGAATAACATTTTTG+CGG + chr4_4:1856990-1857009 None:intergenic 30.0%
TGTATATCATGAATGTCTTG+TGG - chr4_4:1857077-1857096 Msa0663180:intron 30.0%
GTATATCATGAATGTCTTGT+GGG - chr4_4:1857078-1857097 Msa0663180:intron 30.0%
GGTTTCCATTTCATTGTTAA+CGG - chr4_4:1857149-1857168 Msa0663180:intron 30.0%
ATTCTCCGTTAACAATGAAA+TGG + chr4_4:1857157-1857176 None:intergenic 30.0%
TTCATTGTTAACGGAGAATA+AGG - chr4_4:1857158-1857177 Msa0663180:intron 30.0%
TCATTGTTAACGGAGAATAA+GGG - chr4_4:1857159-1857178 Msa0663180:intron 30.0%
!! AAGGAAACTTTTATTTCGCA+TGG + chr4_4:1857196-1857215 None:intergenic 30.0%
TCTATTCAGATTAACTGTCA+AGG + chr4_4:1857215-1857234 None:intergenic 30.0%
TAAGAAACTGAACTATGTTG+AGG - chr4_4:1857259-1857278 Msa0663180:intron 30.0%
! CTGGAATTCTTCTTTTCTTT+TGG - chr4_4:1857282-1857301 Msa0663180:intron 30.0%
!! ATTTCTAGCCAGTTTGTTTA+CGG - chr4_4:1857492-1857511 Msa0663180:CDS 30.0%
TCAACAAACAAAAATAGGAG+AGG + chr4_4:1857520-1857539 None:intergenic 30.0%
CATTCAAAAGAGTAACTAAC+AGG + chr4_4:1857618-1857637 None:intergenic 30.0%
TTACAAACATTTGCTTGTCA+TGG + chr4_4:1857682-1857701 None:intergenic 30.0%
AAGCAAATGTTTGTAACTTC+TGG - chr4_4:1857686-1857705 Msa0663180:CDS 30.0%
! TTTTCTTTTCCAATGATGAG+GGG + chr4_4:1858046-1858065 None:intergenic 30.0%
AAGAAAAATGAGGATTTGTC+TGG - chr4_4:1858059-1858078 Msa0663180:intron 30.0%
GAAAAAGTAAACAGTTGAGA+AGG + chr4_4:1858157-1858176 None:intergenic 30.0%
!!! CTGTTTACTTTTTCAGTTAC+AGG - chr4_4:1858163-1858182 Msa0663180:intron 30.0%
!!! ACTTTTTCAGTTACAGGTTT+AGG - chr4_4:1858169-1858188 Msa0663180:intron 30.0%
TAAGGTACAGATAAACCAAA+CGG + chr4_4:1858342-1858361 None:intergenic 30.0%
TTGACCATTTCTTTCATTTG+GGG + chr4_4:1858370-1858389 None:intergenic 30.0%
TGAAAGAAATGGTCAAATTG+GGG - chr4_4:1858374-1858393 Msa0663180:intron 30.0%
AGATATTGTACATTCCGATA+TGG + chr4_4:1858683-1858702 None:intergenic 30.0%
!!! CTCAAAGTTTTTTGGAACAA+GGG + chr4_4:1858739-1858758 None:intergenic 30.0%
!!! ACTCAAAGTTTTTTGGAACA+AGG + chr4_4:1858740-1858759 None:intergenic 30.0%
ATCAGTGTACAAAAGTTACA+GGG + chr4_4:1858987-1859006 None:intergenic 30.0%
TATCAGTGTACAAAAGTTAC+AGG + chr4_4:1858988-1859007 None:intergenic 30.0%
ACTAATTTACATGCCAAACA+AGG + chr4_4:1859015-1859034 None:intergenic 30.0%
TTAGTGTATACTGTACAATG+TGG - chr4_4:1859030-1859049 Msa0663180:intron 30.0%
TTCAATAGATTGTAGAAACC+AGG - chr4_4:1859127-1859146 Msa0663180:intron 30.0%
! TTCTCATGTTGATGTTTTCT+TGG + chr4_4:1859224-1859243 None:intergenic 30.0%
TAAAGATAGACCATTTAGGT+GGG + chr4_4:1859265-1859284 None:intergenic 30.0%
AAGCTAAAGATAGACCATTT+AGG + chr4_4:1859269-1859288 None:intergenic 30.0%
! TTTAGCTTAATGTATGGTAG+AGG - chr4_4:1859281-1859300 Msa0663180:intron 30.0%
AATAACCTAGGAAGACTATT+TGG + chr4_4:1859389-1859408 None:intergenic 30.0%
ACAGAGATGATAAATAACCT+AGG + chr4_4:1859401-1859420 None:intergenic 30.0%
ATCTCTGTTAATCTGTCTTT+GGG - chr4_4:1859413-1859432 Msa0663180:CDS 30.0%
ATTGTATTCTTGTGCATTGA+AGG - chr4_4:1859490-1859509 Msa0663180:CDS 30.0%
!!! GTTGCATAATTTTTTTTGGG+GGG + chr4_4:1859543-1859562 None:intergenic 30.0%
TAAAGCATATGAACTTTGGT+GGG + chr4_4:1859601-1859620 None:intergenic 30.0%
TTAAAGCATATGAACTTTGG+TGG + chr4_4:1859602-1859621 None:intergenic 30.0%
TTGCATCACACTATATTTCA+AGG + chr4_4:1859700-1859719 None:intergenic 30.0%
!!! TATTATTTTGGATTGCTCTG+TGG - chr4_4:1859734-1859753 Msa0663180:intron 30.0%
! TACATTCTGCTGTTGTTATT+CGG + chr4_4:1859983-1860002 None:intergenic 30.0%
!! AGCAGAATGTATGTTTTAGA+GGG - chr4_4:1859992-1860011 Msa0663180:intron 30.0%
ATAAATTTCCTTCATGCCAT+TGG + chr4_4:1860070-1860089 None:intergenic 30.0%
! TTAAGTTTTACTCAGAAGGA+AGG + chr4_4:1860122-1860141 None:intergenic 30.0%
! AAGCTTAAGTTTTACTCAGA+AGG + chr4_4:1860126-1860145 None:intergenic 30.0%
TATACCTACAATTCTAAACG+GGG + chr4_4:1860182-1860201 None:intergenic 30.0%
CTATACCTACAATTCTAAAC+GGG + chr4_4:1860183-1860202 None:intergenic 30.0%
CCTATACCTACAATTCTAAA+CGG + chr4_4:1860184-1860203 None:intergenic 30.0%
! CGTTTAGAATTGTAGGTATA+GGG - chr4_4:1860182-1860201 Msa0663180:intron 30.0%
TTTAAAGACACAAGAAACAC+AGG + chr4_4:1860308-1860327 None:intergenic 30.0%
TTTAAAAAAGGACAACGAAC+AGG - chr4_4:1860322-1860341 Msa0663180:intron 30.0%
GATTATTTCGTTCCTTACAA+AGG + chr4_4:1860349-1860368 None:intergenic 30.0%
TATGCCTAGTATTAGAACTT+GGG + chr4_4:1860660-1860679 None:intergenic 30.0%
ATATGCCTAGTATTAGAACT+TGG + chr4_4:1860661-1860680 None:intergenic 30.0%
GATTCAACAAGGATTATTTG+AGG + chr4_4:1860732-1860751 None:intergenic 30.0%
GAGTTAATTGTCTTGTATTG+TGG - chr4_4:1860834-1860853 Msa0663180:CDS 30.0%
TTGTTTGGATAGTTTATGCA+TGG - chr4_4:1861048-1861067 Msa0663180:CDS 30.0%
! AGCTTTAACTGGAATTTATG+TGG - chr4_4:1861134-1861153 Msa0663180:CDS 30.0%
GGATAGTTTATGCATGAAAT+TGG - chr4_4:1861155-1861174 Msa0663180:intron 30.0%
GTTAGAAACATGTACTGAAT+CGG - chr4_4:1861177-1861196 Msa0663180:intron 30.0%
TATGGCTAATCTTATAGTGT+TGG - chr4_4:1861304-1861323 Msa0663180:CDS 30.0%
GATAATGAAGCTAATAAGAC+TGG - chr4_4:1861536-1861555 Msa0663180:CDS 30.0%
TAATAGAGCTGAAGATTACA+TGG - chr4_4:1861820-1861839 Msa0663180:intron 30.0%
GACACGTTCTAATTATCATT+TGG + chr4_4:1862110-1862129 None:intergenic 30.0%
TTTCAACTAAGAACGCAAAA+TGG + chr4_4:1862157-1862176 None:intergenic 30.0%
! ACTATTTTGTTGAAGTCACT+TGG - chr4_4:1862406-1862425 Msa0663180:intron 30.0%
!! TAAAAGCATTCTCAGCATAA+AGG + chr4_4:1862533-1862552 None:intergenic 30.0%
!! CGGTTTTGATCAAATTGTAT+TGG - chr4_4:1862627-1862646 Msa0663180:intron 30.0%
! TATGGTGTGGAATTATGTTT+TGG - chr4_4:1862693-1862712 Msa0663180:CDS 30.0%
! TAATAACGACCATGATGTTT+TGG - chr4_4:1862758-1862777 Msa0663180:intron 30.0%
CAATCAAATCCAAAACATCA+TGG + chr4_4:1862770-1862789 None:intergenic 30.0%
! TTAAGTTCTGATTTAGACTG+GGG - chr4_4:1862930-1862949 Msa0663180:intron 30.0%
!!! GTACTTTATTTTCCAGTGAA+AGG - chr4_4:1862996-1863015 Msa0663180:intron 30.0%
GACATGTTCAGATAATTCAT+GGG - chr4_4:1863093-1863112 Msa0663180:intron 30.0%
! ACATGTAAAACAGATTGGTT+GGG - chr4_4:1863165-1863184 Msa0663180:intron 30.0%
AATAAGCATGGAATAAGTTG+AGG + chr4_4:1863296-1863315 None:intergenic 30.0%
ATTCAAACCTGAATTACAAG+GGG + chr4_4:1863461-1863480 None:intergenic 30.0%
CATTCAAACCTGAATTACAA+GGG + chr4_4:1863462-1863481 None:intergenic 30.0%
ATATTACATAGACCATGACA+AGG + chr4_4:1863520-1863539 None:intergenic 30.0%
TCAAGCAAAATTTCAGATGA+AGG + chr4_4:1863947-1863966 None:intergenic 30.0%
TCCTTGCATAATAGTAATAC+GGG - chr4_4:1863974-1863993 Msa0663180:intron 30.0%
! AGATCAATTTGGCCTTTAAA+TGG + chr4_4:1864079-1864098 None:intergenic 30.0%
TGAACGTGTGAAATTCATAT+TGG - chr4_4:1864356-1864375 Msa0663180:intron 30.0%
!! TGAAATTCATATTGGTGCTA+GGG - chr4_4:1864364-1864383 Msa0663180:intron 30.0%
CATGTTTGTACATAAAAGAG+GGG - chr4_4:1864469-1864488 Msa0663180:CDS 30.0%
! GTGAAAAAACCACTATTTTC+TGG - chr4_4:1864510-1864529 Msa0663180:CDS 30.0%
ACATCATAGTGATTTACGTA+GGG - chr4_4:1864545-1864564 Msa0663180:CDS 30.0%
! CATTTTCAATGTTGTTGATC+AGG + chr4_4:1864644-1864663 None:intergenic 30.0%
!! GTGAGAGAAATGGGTTTTAA+AGG + chr4_4:1854645-1854664 None:intergenic 35.0%
ATTCTGACTGTAAAGACTTG+AGG - chr4_4:1854866-1854885 Msa0663180:three_prime_UTR 35.0%
TGTATTAGTAGTTGTGTCTG+AGG - chr4_4:1855283-1855302 Msa0663180:CDS 35.0%
GTATTAGTAGTTGTGTCTGA+GGG - chr4_4:1855284-1855303 Msa0663180:CDS 35.0%
TATTAGTAGTTGTGTCTGAG+GGG - chr4_4:1855285-1855304 Msa0663180:CDS 35.0%
GTTTGAGTGTAGGAAATACT+AGG - chr4_4:1855442-1855461 Msa0663180:CDS 35.0%
TGGTATAGTTGTGTACGTAA+TGG - chr4_4:1855472-1855491 Msa0663180:CDS 35.0%
ACAGTTGAGATGTGAATGAT+TGG - chr4_4:1855532-1855551 Msa0663180:CDS 35.0%
CAAACTGTTACAATTCATGG+GGG + chr4_4:1855668-1855687 None:intergenic 35.0%
! GAGCTTTATAAGCACTACTT+TGG - chr4_4:1855713-1855732 Msa0663180:CDS 35.0%
CAAAACAGACTTGTAAAACG+AGG - chr4_4:1855882-1855901 Msa0663180:intron 35.0%
TAAGTAGTGCTTACAAAGCT+TGG + chr4_4:1855913-1855932 None:intergenic 35.0%
AATGGAACTATGTTGGGAAT+GGG + chr4_4:1856122-1856141 None:intergenic 35.0%
TAACCATACATAACTGCTCT+GGG + chr4_4:1856207-1856226 None:intergenic 35.0%
! TGTATTTGTTAACCTGCAGT+TGG - chr4_4:1856314-1856333 Msa0663180:CDS 35.0%
TTGGTTACGTACAAACTGAA+TGG - chr4_4:1856333-1856352 Msa0663180:CDS 35.0%
GATATCGCATAAGATCCTTA+AGG + chr4_4:1856362-1856381 None:intergenic 35.0%
CACAAATACTTACATGTGAC+TGG + chr4_4:1856571-1856590 None:intergenic 35.0%
!!! CTTAGTTCTGCTTTTGAAGA+AGG - chr4_4:1856687-1856706 Msa0663180:intron 35.0%
GAATTGTGAGACTTGTAGAA+AGG - chr4_4:1856752-1856771 Msa0663180:intron 35.0%
TCTAACATGGTAACATCAAC+AGG + chr4_4:1856809-1856828 None:intergenic 35.0%
AAGTAACACCTTTGTGTTGT+TGG - chr4_4:1856933-1856952 Msa0663180:intron 35.0%
CGCAAAAATGTTATTCTGGT+AGG - chr4_4:1856988-1857007 Msa0663180:intron 35.0%
TGAGTTCATTTCACTCGAAA+TGG + chr4_4:1857126-1857145 None:intergenic 35.0%
TCGAGTGAAATGAACTCAAA+AGG - chr4_4:1857128-1857147 Msa0663180:intron 35.0%
CATTGTTAACGGAGAATAAG+GGG - chr4_4:1857160-1857179 Msa0663180:intron 35.0%
GCATATTTCTTTGCATGAAC+TGG + chr4_4:1857239-1857258 None:intergenic 35.0%
! ACCTTAACTTTGAAAGAGCA+GGG + chr4_4:1857393-1857412 None:intergenic 35.0%
! AACCTTAACTTTGAAAGAGC+AGG + chr4_4:1857394-1857413 None:intergenic 35.0%
AGGACAAATTCAATGCAAGA+CGG + chr4_4:1857452-1857471 None:intergenic 35.0%
! TTGTCCTTCTCTTTCCATTT+TGG - chr4_4:1857465-1857484 Msa0663180:intron 35.0%
GTAAACAAACTGGCTAGAAA+TGG + chr4_4:1857493-1857512 None:intergenic 35.0%
TTCTAAATATCAGTCCAGTC+TGG - chr4_4:1857549-1857568 Msa0663180:CDS 35.0%
TCTAAATATCAGTCCAGTCT+GGG - chr4_4:1857550-1857569 Msa0663180:CDS 35.0%
!! TGCATTTGTTATACCGCTAA+AGG - chr4_4:1857575-1857594 Msa0663180:CDS 35.0%
! GGACAATTTTAGACCTTTAG+CGG + chr4_4:1857591-1857610 None:intergenic 35.0%
AAAGAGTAACTAACAGGGAA+AGG + chr4_4:1857612-1857631 None:intergenic 35.0%
ATGTGCTAAGAATGACAAAG+GGG + chr4_4:1857641-1857660 None:intergenic 35.0%
CATGTGCTAAGAATGACAAA+GGG + chr4_4:1857642-1857661 None:intergenic 35.0%
ACATGTGCTAAGAATGACAA+AGG + chr4_4:1857643-1857662 None:intergenic 35.0%
!! CAAAAGTGTTGCATCCAAAT+AGG + chr4_4:1857750-1857769 None:intergenic 35.0%
! CTATTTGGATGCAACACTTT+TGG - chr4_4:1857748-1857767 Msa0663180:intron 35.0%
! TTTCTTTTCCAATGATGAGG+GGG + chr4_4:1858045-1858064 None:intergenic 35.0%
! TGTCTGGAATATCAGCTAAT+TGG - chr4_4:1858075-1858094 Msa0663180:intron 35.0%
AGCTAATTGGAATGTCAAAC+TGG - chr4_4:1858088-1858107 Msa0663180:intron 35.0%
GCTAATTGGAATGTCAAACT+GGG - chr4_4:1858089-1858108 Msa0663180:intron 35.0%
TTGCTTATGAACGGTAATAC+AGG - chr4_4:1858125-1858144 Msa0663180:intron 35.0%
! TTTTCAGTTACAGGTTTAGG+AGG - chr4_4:1858172-1858191 Msa0663180:intron 35.0%
CTGCAATACAACAAAGAATC+CGG + chr4_4:1858236-1858255 None:intergenic 35.0%
! TTTGTTGTATTGCAGGAATG+AGG - chr4_4:1858241-1858260 Msa0663180:intron 35.0%
!! GAATCTTCCTTTAGAGTATG+AGG + chr4_4:1858309-1858328 None:intergenic 35.0%
CTTTCATTTGGGGATGAATA+AGG + chr4_4:1858360-1858379 None:intergenic 35.0%
TCATCCCCAAATGAAAGAAA+TGG - chr4_4:1858363-1858382 Msa0663180:intron 35.0%
CAAATTAATAGCTAGCAGAG+AGG + chr4_4:1858831-1858850 None:intergenic 35.0%
!!! CAATGTGGTGTTAGTTTTTG+TGG - chr4_4:1859045-1859064 Msa0663180:intron 35.0%
! GTTTTTGTGGCAAGTTCTTA+TGG - chr4_4:1859058-1859077 Msa0663180:intron 35.0%
ATAGATTGTAGAAACCAGGA+AGG - chr4_4:1859131-1859150 Msa0663180:intron 35.0%
TAGATTGTAGAAACCAGGAA+GGG - chr4_4:1859132-1859151 Msa0663180:intron 35.0%
CTAAAGATAGACCATTTAGG+TGG + chr4_4:1859266-1859285 None:intergenic 35.0%
TATGACCAAATAGTCTTCCT+AGG - chr4_4:1859381-1859400 Msa0663180:CDS 35.0%
CATCTCTGTTAATCTGTCTT+TGG - chr4_4:1859412-1859431 Msa0663180:CDS 35.0%
TCTCTGTTAATCTGTCTTTG+GGG - chr4_4:1859414-1859433 Msa0663180:CDS 35.0%
CTTAAAATCCTCGATGCAAA+AGG - chr4_4:1859926-1859945 Msa0663180:intron 35.0%
!! CAGCAGAATGTATGTTTTAG+AGG - chr4_4:1859991-1860010 Msa0663180:intron 35.0%
! CCGTTTAGAATTGTAGGTAT+AGG - chr4_4:1860181-1860200 Msa0663180:intron 35.0%
TAGAATTGTAGGTATAGGGT+TGG - chr4_4:1860186-1860205 Msa0663180:intron 35.0%
AATCGCCCTGAATATGTTAT+TGG - chr4_4:1860222-1860241 Msa0663180:intron 35.0%
ATCGCCCTGAATATGTTATT+GGG - chr4_4:1860223-1860242 Msa0663180:intron 35.0%
ACACCCCAATAACATATTCA+GGG + chr4_4:1860230-1860249 None:intergenic 35.0%
TACACCCCAATAACATATTC+AGG + chr4_4:1860231-1860250 None:intergenic 35.0%
GAACAACTCCAAAGTATGTA+GGG + chr4_4:1860411-1860430 None:intergenic 35.0%
TGAACAACTCCAAAGTATGT+AGG + chr4_4:1860412-1860431 None:intergenic 35.0%
GAAAACAGAAAACTTTCGGA+TGG + chr4_4:1860461-1860480 None:intergenic 35.0%
! ATAACTTGCCTGATAACACT+AGG - chr4_4:1860497-1860516 Msa0663180:intron 35.0%
! AAGCTTTATAAGCACCACAT+AGG + chr4_4:1860618-1860637 None:intergenic 35.0%
TATGTGGTGCTTATAAAGCT+TGG - chr4_4:1860617-1860636 Msa0663180:CDS 35.0%
ATGTGGTGCTTATAAAGCTT+GGG - chr4_4:1860618-1860637 Msa0663180:CDS 35.0%
CTAGTATTAGAACTTGGGTT+GGG + chr4_4:1860655-1860674 None:intergenic 35.0%
! ATGTTTGTTACAGTGCTTCT+AGG - chr4_4:1860685-1860704 Msa0663180:intron 35.0%
ACAACTAATCAACCACAACA+AGG + chr4_4:1860814-1860833 None:intergenic 35.0%
! TTTTCGCAGTAACATTTAGC+CGG - chr4_4:1860871-1860890 Msa0663180:CDS 35.0%
GTTGGTTATGGGATTTAGAA+AGG - chr4_4:1860911-1860930 Msa0663180:CDS 35.0%
CAATGCAGATATTACCTGAT+CGG + chr4_4:1860955-1860974 None:intergenic 35.0%
ATCTGCATTGTCTAATTGTC+TGG - chr4_4:1860965-1860984 Msa0663180:CDS 35.0%
TCTGCATTGTCTAATTGTCT+GGG - chr4_4:1860966-1860985 Msa0663180:CDS 35.0%
GTGTACATTGTATGGTTGAA+TGG - chr4_4:1861006-1861025 Msa0663180:CDS 35.0%
TGAATGGAACTAACTTCAAC+TGG - chr4_4:1861022-1861041 Msa0663180:CDS 35.0%
! AACTTCAACTGGAACTTGTT+TGG - chr4_4:1861033-1861052 Msa0663180:CDS 35.0%
GGATAGTTTATGCATGGAAT+TGG - chr4_4:1861054-1861073 Msa0663180:CDS 35.0%
GAAACGTGTACTAAATCGTA+TGG - chr4_4:1861080-1861099 Msa0663180:CDS 35.0%
ATGGTTGAGTGTAGATTGTA+TGG - chr4_4:1861099-1861118 Msa0663180:CDS 35.0%
TTGAGTGTAGATTGTATGGT+TGG - chr4_4:1861103-1861122 Msa0663180:CDS 35.0%
GAAGCTAATAAGACTGGAAA+CGG - chr4_4:1861542-1861561 Msa0663180:CDS 35.0%
! TGTCATTTAAGTCTCATACC+TGG - chr4_4:1861619-1861638 Msa0663180:intron 35.0%
TGACTTATCAACATTTGACC+AGG + chr4_4:1861691-1861710 None:intergenic 35.0%
! TGGTCAAATGTTGATAAGTC+AGG - chr4_4:1861690-1861709 Msa0663180:intron 35.0%
! ATACATAGCAAAAGAAGCAC+TGG - chr4_4:1861713-1861732 Msa0663180:intron 35.0%
!! TACATAGCAAAAGAAGCACT+GGG - chr4_4:1861714-1861733 Msa0663180:intron 35.0%
! CTTTGAGTTTGAGGAATATG+AGG - chr4_4:1861908-1861927 Msa0663180:intron 35.0%
CTGAAACAAAGCAAGAGAAA+TGG + chr4_4:1861936-1861955 None:intergenic 35.0%
!! CTCTTGCTTTGTTTCAGAAA+TGG - chr4_4:1861939-1861958 Msa0663180:intron 35.0%
!! GTTTGTTATGTCTGTGACTT+AGG + chr4_4:1862231-1862250 None:intergenic 35.0%
AAGTCACAGACATAACAAAC+AGG - chr4_4:1862231-1862250 Msa0663180:intron 35.0%
AGTCACAGACATAACAAACA+GGG - chr4_4:1862232-1862251 Msa0663180:intron 35.0%
ACAGGGAATTAAAGTGATGA+AGG - chr4_4:1862249-1862268 Msa0663180:intron 35.0%
CATCACAAATGATCTTCAAC+TGG - chr4_4:1862294-1862313 Msa0663180:intron 35.0%
!!! TCTTCAACTGGTTTTAGTTG+AGG - chr4_4:1862306-1862325 Msa0663180:intron 35.0%
TAGTATCTATGTTCACAGAC+AGG + chr4_4:1862390-1862409 None:intergenic 35.0%
GTCTGTGTTGTAATCTTTCT+TGG - chr4_4:1862458-1862477 Msa0663180:CDS 35.0%
ATGAGAATTGCTATGCATTG+TGG - chr4_4:1862504-1862523 Msa0663180:intron 35.0%
! TATGCTGAGAATGCTTTTAC+AGG - chr4_4:1862534-1862553 Msa0663180:intron 35.0%
ACTCAACAACAATAGTCAAC+AGG + chr4_4:1862722-1862741 None:intergenic 35.0%
TATTGCTGTGCATGTTTATC+AGG - chr4_4:1862856-1862875 Msa0663180:intron 35.0%
! TAAGTTCTGATTTAGACTGG+GGG - chr4_4:1862931-1862950 Msa0663180:intron 35.0%
AGTATACTGAATCCTTTCAC+TGG + chr4_4:1863011-1863030 None:intergenic 35.0%
AATGTGAAGATTGTCTGAAG+TGG - chr4_4:1863032-1863051 Msa0663180:intron 35.0%
GGACATGTTCAGATAATTCA+TGG - chr4_4:1863092-1863111 Msa0663180:intron 35.0%
ATAATTCATGGGATCCAGAA+AGG - chr4_4:1863104-1863123 Msa0663180:intron 35.0%
AGGATGTGTTAACAAGTGAA+TGG + chr4_4:1863142-1863161 None:intergenic 35.0%
! CAATCTGTTTTACATGTGGA+AGG + chr4_4:1863162-1863181 None:intergenic 35.0%
CTTCCACATGTAAAACAGAT+TGG - chr4_4:1863160-1863179 Msa0663180:intron 35.0%
! CAACCAATCTGTTTTACATG+TGG + chr4_4:1863166-1863185 None:intergenic 35.0%
CACATGTAAAACAGATTGGT+TGG - chr4_4:1863164-1863183 Msa0663180:intron 35.0%
TTCAAACCTGAATTACAAGG+GGG + chr4_4:1863460-1863479 None:intergenic 35.0%
CCATTCAAACCTGAATTACA+AGG + chr4_4:1863463-1863482 None:intergenic 35.0%
! CCTTGTAATTCAGGTTTGAA+TGG - chr4_4:1863460-1863479 Msa0663180:intron 35.0%
AGCAGTTTCCAAGAAAATGA+AGG - chr4_4:1863595-1863614 Msa0663180:intron 35.0%
CACATGTAATGTCTGTCTAA+CGG - chr4_4:1863814-1863833 Msa0663180:intron 35.0%
ACCCGTATTACTATTATGCA+AGG + chr4_4:1863978-1863997 None:intergenic 35.0%
GCTGGATATTGAGATCAATT+TGG + chr4_4:1864090-1864109 None:intergenic 35.0%
CAGTAGTCATAATGCTGATA+AGG - chr4_4:1864312-1864331 Msa0663180:intron 35.0%
! GTGAAATTCATATTGGTGCT+AGG - chr4_4:1864363-1864382 Msa0663180:intron 35.0%
!! GAAATTCATATTGGTGCTAG+GGG - chr4_4:1864365-1864384 Msa0663180:intron 35.0%
TTTGTACATAAAAGAGGGGT+AGG - chr4_4:1864473-1864492 Msa0663180:CDS 35.0%
ATAAAAGAGGGGTAGGAAAA+AGG - chr4_4:1864480-1864499 Msa0663180:CDS 35.0%
TAAAAGAGGGGTAGGAAAAA+GGG - chr4_4:1864481-1864500 Msa0663180:CDS 35.0%
CTTGTGTTACCAGAAAATAG+TGG + chr4_4:1864522-1864541 None:intergenic 35.0%
!! CTATTTTCTGGTAACACAAG+TGG - chr4_4:1864522-1864541 Msa0663180:CDS 35.0%
GACATCATAGTGATTTACGT+AGG - chr4_4:1864544-1864563 Msa0663180:CDS 35.0%
TGATTTACGTAGGGAAATCA+TGG - chr4_4:1864554-1864573 Msa0663180:CDS 35.0%
TTTCAATGTTGTTGATCAGG+TGG + chr4_4:1864641-1864660 None:intergenic 35.0%
ACAACGACGAATGAAAGAGA+GGG + chr4_4:1854720-1854739 None:intergenic 40.0%
AACAACGACGAATGAAAGAG+AGG + chr4_4:1854721-1854740 None:intergenic 40.0%
CATAGCAGTAGTAGTAACCA+TGG - chr4_4:1854771-1854790 Msa0663180:three_prime_UTR 40.0%
AACTGAAGAAGAAGAAGCCA+TGG + chr4_4:1854791-1854810 None:intergenic 40.0%
GTCGAAGAAGAAGAAGAAGA+TGG + chr4_4:1854814-1854833 None:intergenic 40.0%
TTGAGGTCTACTGCTAAGAA+AGG - chr4_4:1854883-1854902 Msa0663180:three_prime_UTR 40.0%
ATTAGTAGTTGTGTCTGAGG+GGG - chr4_4:1855286-1855305 Msa0663180:CDS 40.0%
TGTAGGAAATACTAGGCATG+TGG - chr4_4:1855449-1855468 Msa0663180:CDS 40.0%
TAAGCACTACTTTGGCAATG+TGG - chr4_4:1855721-1855740 Msa0663180:CDS 40.0%
AAGCACTACTTTGGCAATGT+GGG - chr4_4:1855722-1855741 Msa0663180:CDS 40.0%
TTCATTGAGTTTGGCGAGAA+GGG + chr4_4:1855759-1855778 None:intergenic 40.0%
TTCTCGCCAAACTCAATGAA+GGG - chr4_4:1855759-1855778 Msa0663180:CDS 40.0%
AGCTATATCTCTAGGCAATG+TGG - chr4_4:1855933-1855952 Msa0663180:intron 40.0%
GCTATATCTCTAGGCAATGT+GGG - chr4_4:1855934-1855953 Msa0663180:intron 40.0%
TCTAGCACCTTCATTGTGTT+GGG + chr4_4:1855980-1855999 None:intergenic 40.0%
! TGGAAAGTGTGTACTCTGTT+GGG + chr4_4:1856072-1856091 None:intergenic 40.0%
GAATGGAACTATGTTGGGAA+TGG + chr4_4:1856123-1856142 None:intergenic 40.0%
CCAGAAGGCAAGATAATGAA+TGG + chr4_4:1856140-1856159 None:intergenic 40.0%
CCATTCATTATCTTGCCTTC+TGG - chr4_4:1856137-1856156 Msa0663180:intron 40.0%
ATCATAACCAGAACTCCAGA+AGG + chr4_4:1856155-1856174 None:intergenic 40.0%
!! TTCTGGAGTTCTGGTTATGA+TGG - chr4_4:1856154-1856173 Msa0663180:intron 40.0%
CTAACCATACATAACTGCTC+TGG + chr4_4:1856208-1856227 None:intergenic 40.0%
! CAAACTGAATGGACTCCTTA+AGG - chr4_4:1856344-1856363 Msa0663180:CDS 40.0%
! ATTTTCCACTCAAACGCTTC+TGG - chr4_4:1856723-1856742 Msa0663180:intron 40.0%
! TTTTTGCAGCGAATTCACTG+TGG - chr4_4:1856898-1856917 Msa0663180:intron 40.0%
! TTTTGCAGCGAATTCACTGT+GGG - chr4_4:1856899-1856918 Msa0663180:intron 40.0%
! GTAAAGCATTCAATTCCTCC+TGG + chr4_4:1856961-1856980 None:intergenic 40.0%
TGCCCGCAAAAATGTTATTC+TGG - chr4_4:1856984-1857003 Msa0663180:intron 40.0%
TCACTCGAAATGGAGGAAAT+GGG + chr4_4:1857116-1857135 None:intergenic 40.0%
TTCACTCGAAATGGAGGAAA+TGG + chr4_4:1857117-1857136 None:intergenic 40.0%
GTTCATTTCACTCGAAATGG+AGG + chr4_4:1857123-1857142 None:intergenic 40.0%
AAACTGAACTATGTTGAGGC+TGG - chr4_4:1857263-1857282 Msa0663180:intron 40.0%
TCCCTGCTCTTTCAAAGTTA+AGG - chr4_4:1857389-1857408 Msa0663180:intron 40.0%
AAGGTTAGACATGTCTGCTA+TGG - chr4_4:1857408-1857427 Msa0663180:intron 40.0%
TAACAAATGCAAACCCAGAC+TGG + chr4_4:1857566-1857585 None:intergenic 40.0%
AGAGATAAAGATTGTGGCCA+CGG + chr4_4:1857825-1857844 None:intergenic 40.0%
GAGAGATATAGAGACATGTC+TGG - chr4_4:1857861-1857880 Msa0663180:intron 40.0%
AAAAGTTGGAGTCAGTTAGC+TGG - chr4_4:1857885-1857904 Msa0663180:intron 40.0%
GAAGCTGAATTGAACAGACT+GGG + chr4_4:1857939-1857958 None:intergenic 40.0%
AGAAGCTGAATTGAACAGAC+TGG + chr4_4:1857940-1857959 None:intergenic 40.0%
TCAACTAGAGAATGCACATC+TGG + chr4_4:1857978-1857997 None:intergenic 40.0%
! TTCTTTTCCAATGATGAGGG+GGG + chr4_4:1858044-1858063 None:intergenic 40.0%
GAATGTCAAACTGGGTTCAA+GGG - chr4_4:1858097-1858116 Msa0663180:intron 40.0%
! AGGGACATGTTGCTTATGAA+CGG - chr4_4:1858116-1858135 Msa0663180:intron 40.0%
! CGGATTCTTTGTTGTATTGC+AGG - chr4_4:1858234-1858253 Msa0663180:intron 40.0%
TATTGCAGGAATGAGGAATG+AGG - chr4_4:1858248-1858267 Msa0663180:intron 40.0%
ATGAGGAATGAGGACAAATC+AGG - chr4_4:1858258-1858277 Msa0663180:intron 40.0%
GATTCAACTTCTCAACCGTT+TGG - chr4_4:1858324-1858343 Msa0663180:intron 40.0%
AATGGTCAAATTGGGGTAAC+TGG - chr4_4:1858381-1858400 Msa0663180:intron 40.0%
CATTTACCTCTTGACTCATC+AGG - chr4_4:1858459-1858478 Msa0663180:CDS 40.0%
!!! CACTGGCACTCAAAGTTTTT+TGG + chr4_4:1858747-1858766 None:intergenic 40.0%
ACTACCCAAAAAATGTGCTG+AGG - chr4_4:1858792-1858811 Msa0663180:intron 40.0%
!!! CCAACCTCAGCACATTTTTT+GGG + chr4_4:1858799-1858818 None:intergenic 40.0%
!!! ACCAACCTCAGCACATTTTT+TGG + chr4_4:1858800-1858819 None:intergenic 40.0%
GCAAGAGATTTATGACATGC+AGG + chr4_4:1858958-1858977 None:intergenic 40.0%
ACACTGATAAGCTCCTTGTT+TGG - chr4_4:1858999-1859018 Msa0663180:intron 40.0%
! TAATGCAGTTTTACCCTTCC+TGG + chr4_4:1859148-1859167 None:intergenic 40.0%
TTAGCCAATTCCCACCTAAA+TGG - chr4_4:1859252-1859271 Msa0663180:intron 40.0%
TAGACCATTTAGGTGGGAAT+TGG + chr4_4:1859259-1859278 None:intergenic 40.0%
GGGGATTCCTTATACTGATA+CGG - chr4_4:1859433-1859452 Msa0663180:CDS 40.0%
TCCTTATACTGATACGGTCT+TGG - chr4_4:1859439-1859458 Msa0663180:CDS 40.0%
TCCAAGACCGTATCAGTATA+AGG + chr4_4:1859443-1859462 None:intergenic 40.0%
TGGATTTGTGGGATTACTTC+TGG - chr4_4:1859754-1859773 Msa0663180:intron 40.0%
GGATTTGTGGGATTACTTCT+GGG - chr4_4:1859755-1859774 Msa0663180:intron 40.0%
AATCCTCGATGCAAAAGGAA+AGG - chr4_4:1859931-1859950 Msa0663180:intron 40.0%
! ATTCCTTTCCTTTTGCATCG+AGG + chr4_4:1859937-1859956 None:intergenic 40.0%
TCGATGCAAAAGGAAAGGAA+TGG - chr4_4:1859936-1859955 Msa0663180:intron 40.0%
! CTTAATGGGTCAGATATGCA+CGG - chr4_4:1860143-1860162 Msa0663180:intron 40.0%
TCGCCCTGAATATGTTATTG+GGG - chr4_4:1860224-1860243 Msa0663180:intron 40.0%
TTCCAACACCTAGTGTTATC+AGG + chr4_4:1860508-1860527 None:intergenic 40.0%
CAACCTAAATGCCAGCAATT+AGG + chr4_4:1860563-1860582 None:intergenic 40.0%
CCTAGTATTAGAACTTGGGT+TGG + chr4_4:1860656-1860675 None:intergenic 40.0%
! CCAACCCAAGTTCTAATACT+AGG - chr4_4:1860653-1860672 Msa0663180:CDS 40.0%
TCCTTGTTGAATCCTTGTCT+TGG - chr4_4:1860739-1860758 Msa0663180:intron 40.0%
CCTTGTTGAATCCTTGTCTT+GGG - chr4_4:1860740-1860759 Msa0663180:intron 40.0%
!! ACATAAAAGCACCCAAGACA+AGG + chr4_4:1860754-1860773 None:intergenic 40.0%
GGTACAACACAGGATACAAT+GGG + chr4_4:1860787-1860806 None:intergenic 40.0%
TGGTACAACACAGGATACAA+TGG + chr4_4:1860788-1860807 None:intergenic 40.0%
AATCAACCACAACAAGGTTG+TGG + chr4_4:1860808-1860827 None:intergenic 40.0%
GTTACTGCGAAAATCAGTTC+AGG + chr4_4:1860864-1860883 None:intergenic 40.0%
GTGTAGATTGTATGGTTGGA+TGG - chr4_4:1861107-1861126 Msa0663180:CDS 40.0%
!! TGGATGGAACTAGCTTTAAC+TGG - chr4_4:1861123-1861142 Msa0663180:CDS 40.0%
GACAGATGAAAAATGCAACC+AGG + chr4_4:1861640-1861659 None:intergenic 40.0%
!! GCATTTTTCATCTGTCGCTT+AGG - chr4_4:1861644-1861663 Msa0663180:intron 40.0%
!! ATCTGTCGCTTAGGTTGAAT+TGG - chr4_4:1861653-1861672 Msa0663180:intron 40.0%
TCAACATTTGACCAGGAACT+AGG + chr4_4:1861684-1861703 None:intergenic 40.0%
!! ACATAGCAAAAGAAGCACTG+GGG - chr4_4:1861715-1861734 Msa0663180:intron 40.0%
ATTACATGGCAAGAAGCTCA+AGG - chr4_4:1861834-1861853 Msa0663180:intron 40.0%
ACAATGCTTGGGACATGATT+AGG + chr4_4:1861876-1861895 None:intergenic 40.0%
! TAATCATGTCCCAAGCATTG+TGG - chr4_4:1861875-1861894 Msa0663180:intron 40.0%
CTTCAATCACCACAATGCTT+GGG + chr4_4:1861887-1861906 None:intergenic 40.0%
!! GATTGAAGGCTTTGAGTTTG+AGG - chr4_4:1861899-1861918 Msa0663180:intron 40.0%
GAACTATATCACCTGCATCA+TGG + chr4_4:1862132-1862151 None:intergenic 40.0%
! TCACTTGGCTCGTCTTATAT+TGG - chr4_4:1862421-1862440 Msa0663180:CDS 40.0%
! AATGCTTTTACAGGATGCTC+CGG - chr4_4:1862543-1862562 Msa0663180:intron 40.0%
! AAAAGTCAATGCTAGTCTCC+AGG + chr4_4:1862807-1862826 None:intergenic 40.0%
! TCTGAACATGTCCATTTTGC+TGG + chr4_4:1863085-1863104 None:intergenic 40.0%
! TGGAATAAGTTGAGGAAGAC+TGG + chr4_4:1863288-1863307 None:intergenic 40.0%
GTGCTTTGTGCAAATAAGCA+TGG + chr4_4:1863308-1863327 None:intergenic 40.0%
TTGTTACCCCCTTGTAATTC+AGG - chr4_4:1863451-1863470 Msa0663180:intron 40.0%
ATGTCTCAGATTCCTTGTCA+TGG - chr4_4:1863505-1863524 Msa0663180:intron 40.0%
! CTTAGTGGCCTTCATTTTCT+TGG + chr4_4:1863606-1863625 None:intergenic 40.0%
ACTTGCAAATCTAGCAATCC+TGG - chr4_4:1863667-1863686 Msa0663180:intron 40.0%
CTTGCAAATCTAGCAATCCT+GGG - chr4_4:1863668-1863687 Msa0663180:intron 40.0%
TTGCAAATCTAGCAATCCTG+GGG - chr4_4:1863669-1863688 Msa0663180:intron 40.0%
GTTTCCGTACCCTTATGTTA+CGG - chr4_4:1863846-1863865 Msa0663180:intron 40.0%
ATCATTACCCTCCTTGTTCA+TGG + chr4_4:1864014-1864033 None:intergenic 40.0%
ATGAACAAGGAGGGTAATGA+TGG - chr4_4:1864013-1864032 Msa0663180:intron 40.0%
! GAGACACGGATGATTTTATC+CGG + chr4_4:1864057-1864076 None:intergenic 40.0%
TCATCCGTGTCTCCATTTAA+AGG - chr4_4:1864064-1864083 Msa0663180:intron 40.0%
! TTGGCCTTTAAATGGAGACA+CGG + chr4_4:1864071-1864090 None:intergenic 40.0%
ACTTTGTTGAACTCTGGTAC+TGG - chr4_4:1864208-1864227 Msa0663180:intron 40.0%
!! CTTAGCAACGGTGTTATTCA+TGG - chr4_4:1864286-1864305 Msa0663180:intron 40.0%
CACGTTCATAGACAAAGACT+GGG + chr4_4:1864344-1864363 None:intergenic 40.0%
ACACGTTCATAGACAAAGAC+TGG + chr4_4:1864345-1864364 None:intergenic 40.0%
!! TCTTGCAAAGCTTGTTGAAG+TGG - chr4_4:1864401-1864420 Msa0663180:intron 40.0%
!! CTTGCAAAGCTTGTTGAAGT+GGG - chr4_4:1864402-1864421 Msa0663180:intron 40.0%
!! TTGCAAAGCTTGTTGAAGTG+GGG - chr4_4:1864403-1864422 Msa0663180:intron 40.0%
TCCGTAGTTCATATCCACTT+CGG - chr4_4:1864434-1864453 Msa0663180:intron 40.0%
AAAAGAGGGGTAGGAAAAAG+GGG - chr4_4:1864482-1864501 Msa0663180:CDS 40.0%
TACGTAGGGAAATCATGGAA+TGG - chr4_4:1864559-1864578 Msa0663180:CDS 40.0%
ATGTTGTTGATCAGGTGGTA+CGG + chr4_4:1864636-1864655 None:intergenic 40.0%
GGTCTACTGCTAAGAAAGGT+TGG - chr4_4:1854887-1854906 Msa0663180:three_prime_UTR 45.0%
ATCGATCACAGAGTTGAGCT+AGG + chr4_4:1854930-1854949 None:intergenic 45.0%
ATTTCCGACCAAGTTACACG+TGG - chr4_4:1855067-1855086 Msa0663180:CDS 45.0%
! TGGCGTTTGGTTTCATGGTT+GGG - chr4_4:1855087-1855106 Msa0663180:CDS 45.0%
AGGAAATACTAGGCATGTGG+TGG - chr4_4:1855452-1855471 Msa0663180:CDS 45.0%
GTTACAATTCATGGGGGTCA+GGG + chr4_4:1855662-1855681 None:intergenic 45.0%
TGTTACAATTCATGGGGGTC+AGG + chr4_4:1855663-1855682 None:intergenic 45.0%
TCATTGAGTTTGGCGAGAAG+GGG + chr4_4:1855758-1855777 None:intergenic 45.0%
CTTCATTGAGTTTGGCGAGA+AGG + chr4_4:1855760-1855779 None:intergenic 45.0%
CTTCTCGCCAAACTCAATGA+AGG - chr4_4:1855758-1855777 Msa0663180:CDS 45.0%
CTCTAGCACCTTCATTGTGT+TGG + chr4_4:1855981-1856000 None:intergenic 45.0%
!! CAACACAATGAAGGTGCTAG+AGG - chr4_4:1855979-1855998 Msa0663180:CDS 45.0%
GTCGCCTAATTGTGGCATTT+GGG + chr4_4:1856020-1856039 None:intergenic 45.0%
AGTCGCCTAATTGTGGCATT+TGG + chr4_4:1856021-1856040 None:intergenic 45.0%
AATGCCACAATTAGGCGACT+AGG - chr4_4:1856021-1856040 Msa0663180:intron 45.0%
ATGCCACAATTAGGCGACTA+GGG - chr4_4:1856022-1856041 Msa0663180:intron 45.0%
! CTGGAAAGTGTGTACTCTGT+TGG + chr4_4:1856073-1856092 None:intergenic 45.0%
!! TATCTTGCCTTCTGGAGTTC+TGG - chr4_4:1856145-1856164 Msa0663180:intron 45.0%
CATCCCAGAGCAGTTATGTA+TGG - chr4_4:1856201-1856220 Msa0663180:intron 45.0%
GTTTGTACGTAACCAACTGC+AGG + chr4_4:1856329-1856348 None:intergenic 45.0%
! ACCTTTGTGTTGTTGGATCC+AGG - chr4_4:1856940-1856959 Msa0663180:intron 45.0%
TCCTGGATCCAACAACACAA+AGG + chr4_4:1856944-1856963 None:intergenic 45.0%
! TTTGTGTTGTTGGATCCAGG+AGG - chr4_4:1856943-1856962 Msa0663180:intron 45.0%
TAGGTTTCTCTATCGCTGTG+AGG - chr4_4:1857007-1857026 Msa0663180:intron 45.0%
ACTCAAGCCCAAACAGGATA+GGG + chr4_4:1857047-1857066 None:intergenic 45.0%
ATGATGACTCAAGCCCAAAC+AGG + chr4_4:1857053-1857072 None:intergenic 45.0%
ACTCGAAATGGAGGAAATGG+GGG + chr4_4:1857114-1857133 None:intergenic 45.0%
CACTCGAAATGGAGGAAATG+GGG + chr4_4:1857115-1857134 None:intergenic 45.0%
GGAGCCAAAATGGAAAGAGA+AGG + chr4_4:1857472-1857491 None:intergenic 45.0%
GGCTAGAAATGGAGCCAAAA+TGG + chr4_4:1857482-1857501 None:intergenic 45.0%
GAGACATGTCTGGCAAAAGT+TGG - chr4_4:1857871-1857890 Msa0663180:intron 45.0%
ACTAGAGAATGCACATCTGG+AGG + chr4_4:1857975-1857994 None:intergenic 45.0%
GGAATGTCAAACTGGGTTCA+AGG - chr4_4:1858096-1858115 Msa0663180:intron 45.0%
CATGGAGATGGCTACATAAC+CGG - chr4_4:1858214-1858233 Msa0663180:intron 45.0%
!! CCTTTAGAGTATGAGGCTGT+TGG + chr4_4:1858302-1858321 None:intergenic 45.0%
CCAACAGCCTCATACTCTAA+AGG - chr4_4:1858299-1858318 Msa0663180:intron 45.0%
CAACAAACTCCACCTCATCT+AGG - chr4_4:1858414-1858433 Msa0663180:intron 45.0%
CTAAACTGCTTGCCTAGATG+AGG + chr4_4:1858429-1858448 None:intergenic 45.0%
CATCTAGGCAAGCAGTTTAG+TGG - chr4_4:1858429-1858448 Msa0663180:intron 45.0%
! CAACAACTGACTTCTTCCTC+GGG + chr4_4:1858523-1858542 None:intergenic 45.0%
! GCAACAACTGACTTCTTCCT+CGG + chr4_4:1858524-1858543 None:intergenic 45.0%
GAAGAAGTCAGTTGTTGCCA+CGG - chr4_4:1858526-1858545 Msa0663180:intron 45.0%
AGCTCCAATTCAGTACACCT+GGG + chr4_4:1858558-1858577 None:intergenic 45.0%
TAGCTCCAATTCAGTACACC+TGG + chr4_4:1858559-1858578 None:intergenic 45.0%
CCCAAAAAATGTGCTGAGGT+TGG - chr4_4:1858796-1858815 Msa0663180:intron 45.0%
! TGTCTGCCTTTTGTAATGCC+TGG - chr4_4:1858932-1858951 Msa0663180:intron 45.0%
AGATTTATGACATGCAGGCC+AGG + chr4_4:1858953-1858972 None:intergenic 45.0%
ATCAGGAAGATTGTCTTCCC+TGG - chr4_4:1859173-1859192 Msa0663180:intron 45.0%
TTCTACTCTCTGTTGCTCCA+GGG + chr4_4:1859193-1859212 None:intergenic 45.0%
TTTCTACTCTCTGTTGCTCC+AGG + chr4_4:1859194-1859213 None:intergenic 45.0%
ACTAGGTGGAGTTGGCTATA+TGG + chr4_4:1859325-1859344 None:intergenic 45.0%
CTTATCTCACTAGGTGGAGT+TGG + chr4_4:1859333-1859352 None:intergenic 45.0%
CAACTCCACCTAGTGAGATA+AGG - chr4_4:1859331-1859350 Msa0663180:intron 45.0%
TGGATTGCTCTGTGGATTTG+TGG - chr4_4:1859742-1859761 Msa0663180:intron 45.0%
GGATTGCTCTGTGGATTTGT+GGG - chr4_4:1859743-1859762 Msa0663180:intron 45.0%
CTGAGAAATTGGTGGGAAGT+AGG + chr4_4:1859891-1859910 None:intergenic 45.0%
CTTCAGGCTGAGAAATTGGT+GGG + chr4_4:1859898-1859917 None:intergenic 45.0%
CACCAATTTCTCAGCCTGAA+GGG - chr4_4:1859897-1859916 Msa0663180:intron 45.0%
AACCCTTCAGGCTGAGAAAT+TGG + chr4_4:1859902-1859921 None:intergenic 45.0%
GGATATTTCAGTTCCGCTTC+TGG - chr4_4:1859957-1859976 Msa0663180:intron 45.0%
! TGTTGTTATTCGGCCAGAAG+CGG + chr4_4:1859973-1859992 None:intergenic 45.0%
! AACTGCATGGACTGTATGCA+TGG + chr4_4:1860025-1860044 None:intergenic 45.0%
!! CACAGATATGCTTCTAGAGC+AGG + chr4_4:1860274-1860293 None:intergenic 45.0%
TGGCATCTCCCTACATACTT+TGG - chr4_4:1860400-1860419 Msa0663180:intron 45.0%
TGCCTGATAACACTAGGTGT+TGG - chr4_4:1860503-1860522 Msa0663180:intron 45.0%
TGGAATTTCCGCCTTCATTG+CGG - chr4_4:1860523-1860542 Msa0663180:intron 45.0%
CCTAAATGCCAGCAATTAGG+CGG + chr4_4:1860560-1860579 None:intergenic 45.0%
CATAGGTCATTACGTAGTGC+TGG + chr4_4:1860601-1860620 None:intergenic 45.0%
GCACTACGTAATGACCTATG+TGG - chr4_4:1860601-1860620 Msa0663180:CDS 45.0%
ATAAAGCTTGGGCAGGAGTT+AGG - chr4_4:1860629-1860648 Msa0663180:CDS 45.0%
CCCAAGACAAGGATTCAACA+AGG + chr4_4:1860743-1860762 None:intergenic 45.0%
AACACAGGATACAATGGGAG+GGG + chr4_4:1860782-1860801 None:intergenic 45.0%
CAACACAGGATACAATGGGA+GGG + chr4_4:1860783-1860802 None:intergenic 45.0%
ACAACACAGGATACAATGGG+AGG + chr4_4:1860784-1860803 None:intergenic 45.0%
ACAAGGTTGTGGTACAACAC+AGG + chr4_4:1860797-1860816 None:intergenic 45.0%
GTTGTACCACAACCTTGTTG+TGG - chr4_4:1860799-1860818 Msa0663180:intron 45.0%
AAATCCTTTGCCATCCGATC+AGG - chr4_4:1860938-1860957 Msa0663180:CDS 45.0%
ATTACCTGATCGGATGGCAA+AGG + chr4_4:1860945-1860964 None:intergenic 45.0%
GCAGATATTACCTGATCGGA+TGG + chr4_4:1860951-1860970 None:intergenic 45.0%
GGGTTCAGCTCAGGTTAATA+TGG - chr4_4:1861286-1861305 Msa0663180:CDS 45.0%
AATTGGCTGATCCTAGTTCC+TGG - chr4_4:1861670-1861689 Msa0663180:intron 45.0%
TGCTTGGGACATGATTAGGA+GGG + chr4_4:1861872-1861891 None:intergenic 45.0%
ATGCTTGGGACATGATTAGG+AGG + chr4_4:1861873-1861892 None:intergenic 45.0%
CCTTCAATCACCACAATGCT+TGG + chr4_4:1861888-1861907 None:intergenic 45.0%
! CCAAGCATTGTGGTGATTGA+AGG - chr4_4:1861885-1861904 Msa0663180:intron 45.0%
TTAGAACGTGTCCATGATGC+AGG - chr4_4:1862118-1862137 Msa0663180:intron 45.0%
TATGTTCACAGACAGGCTAC+AGG + chr4_4:1862383-1862402 None:intergenic 45.0%
! ATTGTGTTGTTGCTCTCACC+TGG - chr4_4:1862786-1862805 Msa0663180:intron 45.0%
GTGCACTTCTTCCAGCAAAA+TGG - chr4_4:1863071-1863090 Msa0663180:intron 45.0%
GACTGACATGAAGCATGGTA+TGG + chr4_4:1863237-1863256 None:intergenic 45.0%
TACCATGCTTCATGTCAGTC+AGG - chr4_4:1863237-1863256 Msa0663180:intron 45.0%
ATCCTGACTGACATGAAGCA+TGG + chr4_4:1863242-1863261 None:intergenic 45.0%
AAGAAGATCTGGCAGCAAAG+AGG + chr4_4:1863390-1863409 None:intergenic 45.0%
TGCAGCTGAACAAGAAGATC+TGG + chr4_4:1863401-1863420 None:intergenic 45.0%
GAAAATGAAGGCCACTAAGC+AGG - chr4_4:1863607-1863626 Msa0663180:intron 45.0%
ATGATCAGGATCCTGCTTAG+TGG + chr4_4:1863621-1863640 None:intergenic 45.0%
TCCTGATCATGCTGAAGCTT+TGG - chr4_4:1863631-1863650 Msa0663180:intron 45.0%
TCCAAAGCTTCAGCATGATC+AGG + chr4_4:1863635-1863654 None:intergenic 45.0%
! TGATCATGCTGAAGCTTTGG+AGG - chr4_4:1863634-1863653 Msa0663180:intron 45.0%
!! GATCATGCTGAAGCTTTGGA+GGG - chr4_4:1863635-1863654 Msa0663180:intron 45.0%
TGCAAATCTAGCAATCCTGG+GGG - chr4_4:1863670-1863689 Msa0663180:intron 45.0%
ATGTCGTGGGTGTTTAGTTG+TGG + chr4_4:1863723-1863742 None:intergenic 45.0%
TGCATGTCTGCTTATGCTTG+GGG + chr4_4:1863796-1863815 None:intergenic 45.0%
GTGCATGTCTGCTTATGCTT+GGG + chr4_4:1863797-1863816 None:intergenic 45.0%
TGTGCATGTCTGCTTATGCT+TGG + chr4_4:1863798-1863817 None:intergenic 45.0%
CTTCTCACGCCGTAACATAA+GGG + chr4_4:1863858-1863877 None:intergenic 45.0%
TCTTCTCACGCCGTAACATA+AGG + chr4_4:1863859-1863878 None:intergenic 45.0%
TTCAGATGAAGGCAGTTGCT+GGG + chr4_4:1863936-1863955 None:intergenic 45.0%
TTTCAGATGAAGGCAGTTGC+TGG + chr4_4:1863937-1863956 None:intergenic 45.0%
TAGTAGCCCAACCATGAACA+AGG - chr4_4:1864000-1864019 Msa0663180:intron 45.0%
TACCCTCCTTGTTCATGGTT+GGG + chr4_4:1864009-1864028 None:intergenic 45.0%
TTACCCTCCTTGTTCATGGT+TGG + chr4_4:1864010-1864029 None:intergenic 45.0%
! GTTCTGATGATGATCCTCAC+CGG - chr4_4:1864035-1864054 Msa0663180:intron 45.0%
! ACGGATGATTTTATCCGGTG+AGG + chr4_4:1864052-1864071 None:intergenic 45.0%
GACAATTCTTCTTCTCGCTC+TGG + chr4_4:1864112-1864131 None:intergenic 45.0%
CAGCAGACTTTGTTGAACTC+TGG - chr4_4:1864202-1864221 Msa0663180:intron 45.0%
! TCTGGTACTGGAGATTCATC+AGG - chr4_4:1864220-1864239 Msa0663180:intron 45.0%
AGGGAAGTGAAGCTTAGCAA+CGG - chr4_4:1864274-1864293 Msa0663180:intron 45.0%
GCCGAAGTGGATATGAACTA+CGG + chr4_4:1864438-1864457 None:intergenic 45.0%
TGAATAGTAAGACGCCGAAG+TGG + chr4_4:1864451-1864470 None:intergenic 45.0%
TCATGGAATGGAGCTGAATG+AGG - chr4_4:1864571-1864590 Msa0663180:CDS 45.0%
AATGGAGCTGAATGAGGTAG+TGG - chr4_4:1864577-1864596 Msa0663180:CDS 45.0%
ATGGAGCTGAATGAGGTAGT+GGG - chr4_4:1864578-1864597 Msa0663180:CDS 45.0%
!!! TATTAATTTGAAAATATTTT+TGG - chr4_4:1858841-1858860 Msa0663180:intron 5.0%
!!! TTTTTTGTATTATTTTTATA+TGG - chr4_4:1862675-1862694 Msa0663180:CDS 5.0%
AAAGGTTGGAGACTTCGCAC+TGG - chr4_4:1854901-1854920 Msa0663180:three_prime_UTR 50.0%
GCTCAACTCTGTGATCGATG+CGG - chr4_4:1854931-1854950 Msa0663180:three_prime_UTR 50.0%
CTCAACTCTGTGATCGATGC+GGG - chr4_4:1854932-1854951 Msa0663180:three_prime_UTR 50.0%
AACGCCACGTGTAACTTGGT+CGG + chr4_4:1855074-1855093 None:intergenic 50.0%
ACCAAGTTACACGTGGCGTT+TGG - chr4_4:1855074-1855093 Msa0663180:CDS 50.0%
ACCAAACGCCACGTGTAACT+TGG + chr4_4:1855078-1855097 None:intergenic 50.0%
! ACACGTGGCGTTTGGTTTCA+TGG - chr4_4:1855082-1855101 Msa0663180:CDS 50.0%
! GTGGCGTTTGGTTTCATGGT+TGG - chr4_4:1855086-1855105 Msa0663180:CDS 50.0%
TAGTTGTGTCTGAGGGGGTT+AGG - chr4_4:1855291-1855310 Msa0663180:CDS 50.0%
! ACCCGAGTGGGTTTGAATTC+CGG - chr4_4:1855338-1855357 Msa0663180:CDS 50.0%
ACCGGAATTCAAACCCACTC+GGG + chr4_4:1855342-1855361 None:intergenic 50.0%
CACCGGAATTCAAACCCACT+CGG + chr4_4:1855343-1855362 None:intergenic 50.0%
TTGGGGCCCTTCATTGAGTT+TGG + chr4_4:1855768-1855787 None:intergenic 50.0%
TCATTGTGTTGGGTGTGAGG+AGG + chr4_4:1855970-1855989 None:intergenic 50.0%
CCTTCATTGTGTTGGGTGTG+AGG + chr4_4:1855973-1855992 None:intergenic 50.0%
CCTCACACCCAACACAATGA+AGG - chr4_4:1855970-1855989 Msa0663180:CDS 50.0%
GCAGCCCAAATGCCACAATT+AGG - chr4_4:1856013-1856032 Msa0663180:intron 50.0%
TGCCACAATTAGGCGACTAG+GGG - chr4_4:1856023-1856042 Msa0663180:intron 50.0%
CTAGGGGTGAACCACAACTA+CGG - chr4_4:1856039-1856058 Msa0663180:intron 50.0%
TGGGAATTCTGCCGTAGTTG+TGG + chr4_4:1856053-1856072 None:intergenic 50.0%
CAGCCCTTATCCCTTCTGTT+GGG - chr4_4:1856090-1856109 Msa0663180:intron 50.0%
GAGCCCAACAGAAGGGATAA+GGG + chr4_4:1856096-1856115 None:intergenic 50.0%
TGAGCCCAACAGAAGGGATA+AGG + chr4_4:1856097-1856116 None:intergenic 50.0%
TTATCCCTTCTGTTGGGCTC+AGG - chr4_4:1856096-1856115 Msa0663180:intron 50.0%
GAAAACCTAGGGAACCAGCT+TGG + chr4_4:1856294-1856313 None:intergenic 50.0%
TCCACTCAAACGCTTCTGGT+TGG - chr4_4:1856727-1856746 Msa0663180:intron 50.0%
!! TCCAACCAGAAGCGTTTGAG+TGG + chr4_4:1856731-1856750 None:intergenic 50.0%
! ACTCAAACGCTTCTGGTTGG+AGG - chr4_4:1856730-1856749 Msa0663180:intron 50.0%
ATCCCTCTCCCTATCCTGTT+TGG - chr4_4:1857036-1857055 Msa0663180:intron 50.0%
TCCCTCTCCCTATCCTGTTT+GGG - chr4_4:1857037-1857056 Msa0663180:intron 50.0%
GACTCAAGCCCAAACAGGAT+AGG + chr4_4:1857048-1857067 None:intergenic 50.0%
!! GAGAGGCACCGTAAACAAAC+TGG + chr4_4:1857503-1857522 None:intergenic 50.0%
ATAAAGATTGTGGCCACGGC+AGG + chr4_4:1857821-1857840 None:intergenic 50.0%
TGGAGTCAGTTAGCTGGATC+AGG - chr4_4:1857891-1857910 Msa0663180:intron 50.0%
AACTGCTTGCCTAGATGAGG+TGG + chr4_4:1858426-1858445 None:intergenic 50.0%
GCTTCACCTGATGAGTCAAG+AGG + chr4_4:1858468-1858487 None:intergenic 50.0%
TGACTCATCAGGTGAAGCTC+AGG - chr4_4:1858470-1858489 Msa0663180:CDS 50.0%
GTGAAGCTCAGGTTCGCAAT+GGG - chr4_4:1858481-1858500 Msa0663180:CDS 50.0%
GTCAGTTGTTGCCACGGTAT+TGG - chr4_4:1858532-1858551 Msa0663180:intron 50.0%
TTGGCCCAGGTGTACTGAAT+TGG - chr4_4:1858551-1858570 Msa0663180:intron 50.0%
ACTTTGAGTGCCAGTGATGC+TGG - chr4_4:1858751-1858770 Msa0663180:intron 50.0%
CTTTGAGTGCCAGTGATGCT+GGG - chr4_4:1858752-1858771 Msa0663180:intron 50.0%
TGCAGGCCAGGCATTACAAA+AGG + chr4_4:1858941-1858960 None:intergenic 50.0%
! CCAAGCCTTATCTCACTAGG+TGG + chr4_4:1859339-1859358 None:intergenic 50.0%
CCACCTAGTGAGATAAGGCT+TGG - chr4_4:1859336-1859355 Msa0663180:intron 50.0%
! CCACCAAGCCTTATCTCACT+AGG + chr4_4:1859342-1859361 None:intergenic 50.0%
CCTAGTGAGATAAGGCTTGG+TGG - chr4_4:1859339-1859358 Msa0663180:intron 50.0%
TGGGAAGTAGGTCTGTCTCA+TGG + chr4_4:1859879-1859898 None:intergenic 50.0%
CCTTCAGGCTGAGAAATTGG+TGG + chr4_4:1859899-1859918 None:intergenic 50.0%
CCACCAATTTCTCAGCCTGA+AGG - chr4_4:1859896-1859915 Msa0663180:intron 50.0%
AGGTGACACAGGTAAGCCAA+TGG - chr4_4:1860051-1860070 Msa0663180:intron 50.0%
CAGGTAAGCCAATGGCATGA+AGG - chr4_4:1860059-1860078 Msa0663180:intron 50.0%
ATATGCACGGACCTTCCTTC+TGG - chr4_4:1860156-1860175 Msa0663180:intron 50.0%
CAATTCTAAACGGGGCCAGA+AGG + chr4_4:1860174-1860193 None:intergenic 50.0%
! CTGGCCCCGTTTAGAATTGT+AGG - chr4_4:1860175-1860194 Msa0663180:intron 50.0%
CAACGAACAGGCCCTTTGTA+AGG - chr4_4:1860334-1860353 Msa0663180:intron 50.0%
TGCCAGCAATTAGGCGGTTA+GGG + chr4_4:1860554-1860573 None:intergenic 50.0%
ATGCCAGCAATTAGGCGGTT+AGG + chr4_4:1860555-1860574 None:intergenic 50.0%
CCGCCTAATTGCTGGCATTT+AGG - chr4_4:1860557-1860576 Msa0663180:intron 50.0%
! AGTGCTGGAAGCTGCAATGA+TGG + chr4_4:1860586-1860605 None:intergenic 50.0%
GGTGCTTATAAAGCTTGGGC+AGG - chr4_4:1860622-1860641 Msa0663180:CDS 50.0%
CGCAGTAACATTTAGCCGGT+TGG - chr4_4:1860875-1860894 Msa0663180:CDS 50.0%
! CCTGAAGGGAGGTTGGTTAT+GGG - chr4_4:1860900-1860919 Msa0663180:CDS 50.0%
! ATGCTGTTTGGGTTCAGCTC+AGG - chr4_4:1861277-1861296 Msa0663180:CDS 50.0%
CTTGGGACATGATTAGGAGG+GGG + chr4_4:1861870-1861889 None:intergenic 50.0%
GCTTGGGACATGATTAGGAG+GGG + chr4_4:1861871-1861890 None:intergenic 50.0%
GCGAGGACGAAGGATTGTTT+GGG + chr4_4:1862357-1862376 None:intergenic 50.0%
TTCACAGACAGGCTACAGGA+TGG + chr4_4:1862379-1862398 None:intergenic 50.0%
ATAGATGGCTTCCCAAGCAC+CGG + chr4_4:1862565-1862584 None:intergenic 50.0%
GGATCACTCTCGTACCTTTC+TGG + chr4_4:1863121-1863140 None:intergenic 50.0%
AATCTAGCAATCCTGGGGGA+AGG - chr4_4:1863674-1863693 Msa0663180:intron 50.0%
ATCTAGCAATCCTGGGGGAA+GGG - chr4_4:1863675-1863694 Msa0663180:intron 50.0%
TAGTTGTGGCCTGGGAAGAT+GGG + chr4_4:1863709-1863728 None:intergenic 50.0%
TTAGTTGTGGCCTGGGAAGA+TGG + chr4_4:1863710-1863729 None:intergenic 50.0%
TGGGTGTTTAGTTGTGGCCT+GGG + chr4_4:1863717-1863736 None:intergenic 50.0%
AAACACCCACGACATAGACC+CGG - chr4_4:1863728-1863747 Msa0663180:intron 50.0%
CAAACAATGCAAGAGCAGCC+GGG + chr4_4:1863749-1863768 None:intergenic 50.0%
GCAAACAATGCAAGAGCAGC+CGG + chr4_4:1863750-1863769 None:intergenic 50.0%
CACGCCGTAACATAAGGGTA+CGG + chr4_4:1863853-1863872 None:intergenic 50.0%
TAGCCCAACCATGAACAAGG+AGG - chr4_4:1864003-1864022 Msa0663180:intron 50.0%
AGCCCAACCATGAACAAGGA+GGG - chr4_4:1864004-1864023 Msa0663180:intron 50.0%
ATTCTTCTTCTCGCTCTGGC+TGG + chr4_4:1864108-1864127 None:intergenic 50.0%
CGAGAAGAAGAATTGTCGCC+TGG - chr4_4:1864115-1864134 Msa0663180:intron 50.0%
TTGTCGCCTGGTTCAGATTC+TGG - chr4_4:1864127-1864146 Msa0663180:intron 50.0%
ACACCACCAGAATCTGAACC+AGG + chr4_4:1864136-1864155 None:intergenic 50.0%
ACATTTCAGCAGCAGCATCG+TGG + chr4_4:1864171-1864190 None:intergenic 50.0%
ATCAGGTAGTCAGTCACAGC+AGG - chr4_4:1864237-1864256 Msa0663180:intron 50.0%
AGCAGGTAGGAGATGTTGTG+AGG - chr4_4:1864254-1864273 Msa0663180:intron 50.0%
GCAGGTAGGAGATGTTGTGA+GGG - chr4_4:1864255-1864274 Msa0663180:intron 50.0%
AGGGGTAGGAAAAAGGGGAA+TGG - chr4_4:1864487-1864506 Msa0663180:CDS 50.0%
GGGGTAGGAAAAAGGGGAAT+GGG - chr4_4:1864488-1864507 Msa0663180:CDS 50.0%
GGTACGGTGAGCTCTCAAAA+AGG + chr4_4:1864620-1864639 None:intergenic 50.0%
ACTCGAGCTAAAGACCCGAG+TGG - chr4_4:1855325-1855344 Msa0663180:CDS 55.0%
CTCGAGCTAAAGACCCGAGT+GGG - chr4_4:1855326-1855345 Msa0663180:CDS 55.0%
TTCATGGGGGTCAGGGTAGA+GGG + chr4_4:1855655-1855674 None:intergenic 55.0%
ATTCATGGGGGTCAGGGTAG+AGG + chr4_4:1855656-1855675 None:intergenic 55.0%
TGTGTTGGGTGTGAGGAGGT+GGG + chr4_4:1855966-1855985 None:intergenic 55.0%
TTGTGTTGGGTGTGAGGAGG+TGG + chr4_4:1855967-1855986 None:intergenic 55.0%
CACCCCTAGTCGCCTAATTG+TGG + chr4_4:1856028-1856047 None:intergenic 55.0%
CCAACAGAAGGGATAAGGGC+TGG + chr4_4:1856092-1856111 None:intergenic 55.0%
CCAGCCCTTATCCCTTCTGT+TGG - chr4_4:1856089-1856108 Msa0663180:intron 55.0%
CCAGCTTGGCATGAGATGAG+CGG + chr4_4:1856280-1856299 None:intergenic 55.0%
! TCATGCCAAGCTGGTTCCCT+AGG - chr4_4:1856286-1856305 Msa0663180:intron 55.0%
GCCCAAACAGGATAGGGAGA+GGG + chr4_4:1857041-1857060 None:intergenic 55.0%
AGCCCAAACAGGATAGGGAG+AGG + chr4_4:1857042-1857061 None:intergenic 55.0%
AGACTGGGTGCTTGCTTCCA+GGG + chr4_4:1857924-1857943 None:intergenic 55.0%
ATGCACATCTGGAGGCTGGT+CGG + chr4_4:1857967-1857986 None:intergenic 55.0%
GAGAATGCACATCTGGAGGC+TGG + chr4_4:1857971-1857990 None:intergenic 55.0%
AAGGTTGCCCCCCTCATCAT+TGG - chr4_4:1858034-1858053 Msa0663180:intron 55.0%
GGTGAAGCTCAGGTTCGCAA+TGG - chr4_4:1858480-1858499 Msa0663180:CDS 55.0%
CCAGTGATGCTGGGCGAATT+GGG - chr4_4:1858761-1858780 Msa0663180:intron 55.0%
CAGTCCATGCAGTTGCAAGC+AGG - chr4_4:1860031-1860050 Msa0663180:intron 55.0%
GTCACCTGCTTGCAACTGCA+TGG + chr4_4:1860038-1860057 None:intergenic 55.0%
CAGTTGCAAGCAGGTGACAC+AGG - chr4_4:1860040-1860059 Msa0663180:intron 55.0%
TCTAAACGGGGCCAGAAGGA+AGG + chr4_4:1860170-1860189 None:intergenic 55.0%
TTAGGGGCTGACCGCAATGA+AGG + chr4_4:1860537-1860556 None:intergenic 55.0%
GCCAGCAATTAGGCGGTTAG+GGG + chr4_4:1860553-1860572 None:intergenic 55.0%
TTTAGCCGGTTGGAGCCTGA+AGG - chr4_4:1860885-1860904 Msa0663180:CDS 55.0%
TTAGCCGGTTGGAGCCTGAA+GGG - chr4_4:1860886-1860905 Msa0663180:CDS 55.0%
! GCCTGAAGGGAGGTTGGTTA+TGG - chr4_4:1860899-1860918 Msa0663180:CDS 55.0%
CCCATAACCAACCTCCCTTC+AGG + chr4_4:1860903-1860922 None:intergenic 55.0%
GGCGAGGACGAAGGATTGTT+TGG + chr4_4:1862358-1862377 None:intergenic 55.0%
TTACAGGATGCTCCGGTGCT+TGG - chr4_4:1862550-1862569 Msa0663180:intron 55.0%
TACAGGATGCTCCGGTGCTT+GGG - chr4_4:1862551-1862570 Msa0663180:intron 55.0%
! GCTGGAAGAAGTGCACATGC+TGG + chr4_4:1863067-1863086 None:intergenic 55.0%
TCTAGCAATCCTGGGGGAAG+GGG - chr4_4:1863676-1863695 Msa0663180:intron 55.0%
GTGGGTGTTTAGTTGTGGCC+TGG + chr4_4:1863718-1863737 None:intergenic 55.0%
ATCCAGCCGCCTAGTGGAAA+GGG - chr4_4:1863770-1863789 Msa0663180:intron 55.0%
TCGCCTGGTTCAGATTCTGG+TGG - chr4_4:1864130-1864149 Msa0663180:intron 55.0%
GGTAGTCAGTCACAGCAGGT+AGG - chr4_4:1864241-1864260 Msa0663180:intron 55.0%
TCATGGGGGTCAGGGTAGAG+GGG + chr4_4:1855654-1855673 None:intergenic 60.0%
ATTCCCGCACCGTCCACGTT+CGG + chr4_4:1855791-1855810 None:intergenic 60.0%
! TGGGTGTGAGGAGGTGGGTT+TGG + chr4_4:1855961-1855980 None:intergenic 60.0%
TGGGCCTGAGCCCAACAGAA+GGG + chr4_4:1856103-1856122 None:intergenic 60.0%
ATGGGCCTGAGCCCAACAGA+AGG + chr4_4:1856104-1856123 None:intergenic 60.0%
CCGCTCATCTCATGCCAAGC+TGG - chr4_4:1856277-1856296 Msa0663180:intron 60.0%
CTCAGCCATCTAACCTGCCG+TGG - chr4_4:1857805-1857824 Msa0663180:intron 60.0%
TGTGGCCACGGCAGGTTAGA+TGG + chr4_4:1857813-1857832 None:intergenic 60.0%
CTGGATCAGGACCTGTACCC+TGG - chr4_4:1857904-1857923 Msa0663180:intron 60.0%
GGTGCTTGCTTCCAGGGTAC+AGG + chr4_4:1857918-1857937 None:intergenic 60.0%
CAGACTGGGTGCTTGCTTCC+AGG + chr4_4:1857925-1857944 None:intergenic 60.0%
!! TGTTGCCACGGTATTGGCCC+AGG - chr4_4:1858538-1858557 Msa0663180:intron 60.0%
GTACACCTGGGCCAATACCG+TGG + chr4_4:1858546-1858565 None:intergenic 60.0%
GCCAGTGATGCTGGGCGAAT+TGG - chr4_4:1858760-1858779 Msa0663180:intron 60.0%
CCCAATTCGCCCAGCATCAC+TGG + chr4_4:1858764-1858783 None:intergenic 60.0%
GCCCCTAACCGCCTAATTGC+TGG - chr4_4:1860549-1860568 Msa0663180:intron 60.0%
ACCTCCCTTCAGGCTCCAAC+CGG + chr4_4:1860893-1860912 None:intergenic 60.0%
GTTGGAGCCTGAAGGGAGGT+TGG - chr4_4:1860893-1860912 Msa0663180:CDS 60.0%
GATTAGGAGGGGGACGAAGC+AGG + chr4_4:1861860-1861879 None:intergenic 60.0%
CTACAGGATGGCGAGGACGA+AGG + chr4_4:1862367-1862386 None:intergenic 60.0%
AGACAGGCTACAGGATGGCG+AGG + chr4_4:1862374-1862393 None:intergenic 60.0%
AGCAGCCGGGTCTATGTCGT+GGG + chr4_4:1863736-1863755 None:intergenic 60.0%
GTTTGCATCCAGCCGCCTAG+TGG - chr4_4:1863764-1863783 Msa0663180:intron 60.0%
CATCCAGCCGCCTAGTGGAA+AGG - chr4_4:1863769-1863788 Msa0663180:intron 60.0%
TTGGGGCCCTTTCCACTAGG+CGG + chr4_4:1863779-1863798 None:intergenic 60.0%
TGCTTGGGGCCCTTTCCACT+AGG + chr4_4:1863782-1863801 None:intergenic 60.0%
ATGGGGGTCAGGGTAGAGGG+GGG + chr4_4:1855652-1855671 None:intergenic 65.0%
CATGGGGGTCAGGGTAGAGG+GGG + chr4_4:1855653-1855672 None:intergenic 65.0%
TGAAGGGCCCCAACCGAACG+TGG - chr4_4:1855775-1855794 Msa0663180:CDS 65.0%
GCACCGTCCACGTTCGGTTG+GGG + chr4_4:1855785-1855804 None:intergenic 65.0%
CGCACCGTCCACGTTCGGTT+GGG + chr4_4:1855786-1855805 None:intergenic 65.0%
CCAACCGAACGTGGACGGTG+CGG - chr4_4:1855784-1855803 Msa0663180:CDS 65.0%
CAACCGAACGTGGACGGTGC+GGG - chr4_4:1855785-1855804 Msa0663180:CDS 65.0%
CTTCCTCGGGCATCTGCTCG+AGG + chr4_4:1858510-1858529 None:intergenic 65.0%
TGCTGGGCGAATTGGGCGCT+TGG - chr4_4:1858768-1858787 Msa0663180:intron 65.0%
GGGGCTGACCGCAATGAAGG+CGG + chr4_4:1860534-1860553 None:intergenic 65.0%
AGCAATCCTGGGGGAAGGGG+AGG - chr4_4:1863679-1863698 Msa0663180:intron 65.0%
GGAGGCTCTCCCATCTTCCC+AGG - chr4_4:1863697-1863716 Msa0663180:intron 65.0%
GAGCAGCCGGGTCTATGTCG+TGG + chr4_4:1863737-1863756 None:intergenic 65.0%
GGGCCCCAACCGAACGTGGA+CGG - chr4_4:1855779-1855798 Msa0663180:CDS 70.0%
CCGCACCGTCCACGTTCGGT+TGG + chr4_4:1855787-1855806 None:intergenic 70.0%
CGACCTCGAGCAGATGCCCG+AGG - chr4_4:1858504-1858523 Msa0663180:CDS 70.0%
GCCGGTTGGAGCCTGAAGGG+AGG - chr4_4:1860889-1860908 Msa0663180:CDS 70.0%
GGCCCTTTCCACTAGGCGGC+TGG + chr4_4:1863775-1863794 None:intergenic 70.0%
GGAGAGCCTCCCCTTCCCCC+AGG + chr4_4:1863688-1863707 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 1854624 1864790 1854624 ID=Msa0663180;Name=Msa0663180
chr4_4 mRNA 1854624 1864790 1854624 ID=Msa0663180-mRNA-1;Parent=Msa0663180;Name=Msa0663180-mRNA-1;_AED=0.06;_eAED=0.06;_QI=166|0.84|0.78|1|1|1|14|424|905
chr4_4 exon 1854624 1855817 1854624 ID=Msa0663180-mRNA-1:exon:482;Parent=Msa0663180-mRNA-1
chr4_4 exon 1855942 1856012 1855942 ID=Msa0663180-mRNA-1:exon:481;Parent=Msa0663180-mRNA-1
chr4_4 exon 1856289 1856402 1856289 ID=Msa0663180-mRNA-1:exon:480;Parent=Msa0663180-mRNA-1
chr4_4 exon 1856809 1856858 1856809 ID=Msa0663180-mRNA-1:exon:479;Parent=Msa0663180-mRNA-1
chr4_4 exon 1857485 1857748 1857485 ID=Msa0663180-mRNA-1:exon:478;Parent=Msa0663180-mRNA-1
chr4_4 exon 1857834 1857878 1857834 ID=Msa0663180-mRNA-1:exon:477;Parent=Msa0663180-mRNA-1
chr4_4 exon 1858455 1858534 1858455 ID=Msa0663180-mRNA-1:exon:476;Parent=Msa0663180-mRNA-1
chr4_4 exon 1859353 1859527 1859353 ID=Msa0663180-mRNA-1:exon:475;Parent=Msa0663180-mRNA-1
chr4_4 exon 1860601 1860697 1860601 ID=Msa0663180-mRNA-1:exon:474;Parent=Msa0663180-mRNA-1
chr4_4 exon 1860819 1861158 1860819 ID=Msa0663180-mRNA-1:exon:473;Parent=Msa0663180-mRNA-1
chr4_4 exon 1861268 1861604 1861268 ID=Msa0663180-mRNA-1:exon:472;Parent=Msa0663180-mRNA-1
chr4_4 exon 1862409 1862507 1862409 ID=Msa0663180-mRNA-1:exon:471;Parent=Msa0663180-mRNA-1
chr4_4 exon 1862641 1862752 1862641 ID=Msa0663180-mRNA-1:exon:470;Parent=Msa0663180-mRNA-1
chr4_4 exon 1864461 1864790 1864461 ID=Msa0663180-mRNA-1:exon:469;Parent=Msa0663180-mRNA-1
chr4_4 five_prime_UTR 1864625 1864790 1864625 ID=Msa0663180-mRNA-1:five_prime_utr;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1864461 1864624 1864461 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1862641 1862752 1862641 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1862409 1862507 1862409 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1861268 1861604 1861268 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1860819 1861158 1860819 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1860601 1860697 1860601 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1859353 1859527 1859353 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1858455 1858534 1858455 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1857834 1857878 1857834 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1857485 1857748 1857485 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1856809 1856858 1856809 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1856289 1856402 1856289 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1855942 1856012 1855942 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 CDS 1855048 1855817 1855048 ID=Msa0663180-mRNA-1:cds;Parent=Msa0663180-mRNA-1
chr4_4 three_prime_UTR 1854624 1855047 1854624 ID=Msa0663180-mRNA-1:three_prime_utr;Parent=Msa0663180-mRNA-1
Gene Sequence

>Msa0663180

ATGGCTTCTTCTTCTTCAGTTCCATCTTCTTCTTCTTCTTCGACTATTTGTTCTTCAACCTTAAAACGATGCTTCAATTCTGACTGTAAAGACTTGAGGTCTACTGCTAAGAAAGGTTGGAGACTTCGCACTGGTGACCTAGCTCAACTCTGTGATCGATGCGGTAAAAAATTGATTGTTTCTGTGATACTTAGTTCTGCTTTTGAAGAAGGGAGATTCTGTGACATTTTCCACTCAAACGCTTCTGGTTGGAGGAATTGTGAGACTTGTAGAAAGCGAATTCACTGTGGGTGTATTGTTTCAAGTAACACCTTTGTGTTGTTGGATCCAGGAGGAATTGAATGCTTTACATGTGCCCGCAAAAATGTTATTCTGCCATCTAACCTGCCGTGGCCACAATCTTTATCTCTTACAAATCGTTTATCGGAGAGATATAGAGACATGTCTGGCAAAAGTTGGAGTCAGTTAGCTGGATCAGGACCTGTACCCTGGAAGCAAGCACCCAGTCTGTTCAATTCAGCTTCTTCATCCGACCAGCCTCCAGATGTGCATTCTCTAGTTGATTTATCAAATAACTTTGACAAAATATATGGCAATGAAAGGTTGCCCCCCTCATCATTGGAAAAGAAAAATGAGGATTTGTCTGGAATATCAGCTAATTGGAATGTCAAACTGGGTTCAAGGGACATGTTGCTTATGAACGGTAATACAGGAATGAGGAATGAGGACAAATCAGGTCTGTGTTTAAATATGTGCCAACAGCCTCATACTCTAAAGGAAGATTCAACTTCTCAACCGTTTGGTTTATCTGTACCTTATTCATCCCCAAATGAAAGAAATGGTCAAATTGGGGTAACTGGAATTCATCTACAACAAACTCCACCTCATCTAGGCAAGCAGTTTAGTGGCACTATGCATTTACCTCTTGACTCATCAGGTGAAGCTCAGGTTCGCAATGGGCGACCTCGAGCAGATGCCCGAGGAAGAAGTCAGTTGTTGCCACGGTATTGGCCCAGGTGTACTGAATTGGAGCTACAGCAAATATCTGTCGATTCTAATTCTGTAATAACTCCCTTGTTCCAAAAAACTTTGAGTGCCAGTGATGCTGGGCGAATTGGGCGCTTGGTACTACCCAAAAAATGTGCTGAGACCTACTTCCCACCAATTTCTCAGCCTGAAGGGTTGCCTCTTAAAATCCTCGATGCAAAAGGAAAGGAATGGATATTTCAGTTCCGCTTCTGGCCGAATAACAACAGCAGAATGTATGTTTTAGAGGGTGTAACTCCATGCATACAGTCCATGCAGTTGCAAGCAGGTGACACAGTAACATTTAGCCGGTTGGAGCCTGAAGGGAGGTTGGTTATGGGATTTAGAAAGGCTACAAATCCTTTGCCATCCGATCAGGATAATGAAGCTAATAAGACTGGAAACGGATTTTCTGCTCACGAAGTTGAATTGGCTGATCCTAGTTCCTGGTCAAATGTTGATAAGTCAGGATACATAGCAAAAGAAGCACTGGGGAGCAAATCTTTAATCTCTAGAAAGAGAAAAAACAACATATTGGGTTCAAAAAGTAAACGTCTAAAAATTGAAAATGAGGATATAATAGAGCTGAAGATTACATGGCAAGAAGCTCAAGGCCTGCTTCGTCCCCCTCCTAATCATGTCCCAAGCATTGTGGTGATTGAAGGCTTTGAGTTTGAGGAATATGAGGATGCTCCGGTGCTTGGGAAGCCATCTATTTTCACTAGTGATAATATGGGTGAAAGGATTCAGTATACTCAATGTGAAGATTGTCTGAAGTGGCGCAAATTGCCAGCATGTGCACTTCTTCCAGCAAAATGGACATGTTCAGATAATTCATGGGATCCAGAAAGATCTTCTTGTTCAGCTGCACAAGAGCTTACAACAGAACAACTTGAGAATTTGTTACCCCCTTGTAATTCAGCAGTTTCCAAGAAAATGAAGGCCACTAAGCAGGATCCTGATCATGCTGAAGCTTTGGAGGGACTTGATACACTTGCAAATCTAGCAATCCTGGGGGAAGGGGAGGCTCTCCCATCTTCCCAGGCCACAACTAAACACCCACGACATAGACCCGGCTGCTCTTGCATTGTTTGCATCCAGCCGCCTAGTGGAAAGGGCCCCAAGCATAAGCAGACATGCACATGTAATGTCTGTCTAACGGTGAAGCGTCGTTTCCGTACCCTTATGTTACGGCGTGAGAAGAAACAGTCAGAAAAAGAAGCAGAAACAACACGTAAAAAGCAGCAGCAACAGAATTCCCAGCAACTGCCTTCATCTGAAATTTTGCTTGACGATGATTCCTTGCATAATAGTAATACGGGTGATAGTAGCCCAACCATGAACAAGGAGGGTAATGATGGTTCTGATGATGATCCTCACCGGATAAAATCATCCGTGTCTCCATTTAAAGGCCAAATTGATCTCAATATCCAGCCAGAGCGAGAAGAAGAATTGTCGCCTGGTTCAGATTCTGGTGGTGTGATGAAGCTGCTCCACGATGCTGCTGCTGAAATGTATCTCAAGCAGCAGCAGACTTTGTTGAACTCTGGTACTGGAGATTCATCAGGTAGTCAGTCACAGCAGGTAGGAGATGTTGTGAGGGAAGTGAAGCTTAGCAACGGTGTTATTCATGGTAGCAGTAGTCATAATGCTGATAAGGAACATGCCCAGTCTTTGTCTATGAACGTGTGA
Protein sequence

>Msa0663180

MASSSSVPSSSSSSTICSSTLKRCFNSDCKDLRSTAKKGWRLRTGDLAQLCDRCGKKLIVSVILSSAFEEGRFCDIFHSNASGWRNCETCRKRIHCGCIVSSNTFVLLDPGGIECFTCARKNVILPSNLPWPQSLSLTNRLSERYRDMSGKSWSQLAGSGPVPWKQAPSLFNSASSSDQPPDVHSLVDLSNNFDKIYGNERLPPSSLEKKNEDLSGISANWNVKLGSRDMLLMNGNTGMRNEDKSGLCLNMCQQPHTLKEDSTSQPFGLSVPYSSPNERNGQIGVTGIHLQQTPPHLGKQFSGTMHLPLDSSGEAQVRNGRPRADARGRSQLLPRYWPRCTELELQQISVDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAETYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKATNPLPSDQDNEANKTGNGFSAHEVELADPSSWSNVDKSGYIAKEALGSKSLISRKRKNNILGSKSKRLKIENEDIIELKITWQEAQGLLRPPPNHVPSIVVIEGFEFEEYEDAPVLGKPSIFTSDNMGERIQYTQCEDCLKWRKLPACALLPAKWTCSDNSWDPERSSCSAAQELTTEQLENLLPPCNSAVSKKMKATKQDPDHAEALEGLDTLANLAILGEGEALPSSQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEKEAETTRKKQQQQNSQQLPSSEILLDDDSLHNSNTGDSSPTMNKEGNDGSDDDPHRIKSSVSPFKGQIDLNIQPEREEELSPGSDSGGVMKLLHDAAAEMYLKQQQTLLNSGTGDSSGSQSQQVGDVVREVKLSNGVIHGSSSHNADKEHAQSLSMNV*