Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670920 | XP_013455021.2 | 86.901 | 313 | 39 | 1 | 1 | 313 | 1 | 311 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670920 | sp|Q8L9Y3|ARR14_ARATH | 38.783 | 263 | 120 | 6 | 7 | 232 | 4 | 262 | 3.57e-54 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670920 | A0A396I0H3 | 84.076 | 314 | 47 | 2 | 1 | 313 | 1 | 312 | 0.0 | 543 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0670920 | TF | GARP-ARR-B |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670920 | MtrunA17_Chr4g0009851 | 84.076 | 314 | 47 | 2 | 1 | 313 | 1 | 312 | 0.0 | 543 |
| Msa0670920 | MtrunA17_Chr4g0009981 | 86.973 | 261 | 32 | 1 | 53 | 313 | 1 | 259 | 2.80e-170 | 472 |
| Msa0670920 | MtrunA17_Chr4g0009901 | 74.793 | 242 | 59 | 1 | 1 | 242 | 1 | 240 | 6.71e-127 | 363 |
| Msa0670920 | MtrunA17_Chr4g0011071 | 77.698 | 139 | 29 | 1 | 55 | 193 | 35 | 171 | 1.09e-72 | 222 |
| Msa0670920 | MtrunA17_Chr1g0161431 | 38.082 | 365 | 159 | 9 | 10 | 309 | 11 | 373 | 1.23e-69 | 227 |
| Msa0670920 | MtrunA17_Chr6g0471041 | 46.416 | 293 | 138 | 8 | 10 | 296 | 14 | 293 | 4.49e-69 | 221 |
| Msa0670920 | MtrunA17_Chr3g0123131 | 40.316 | 253 | 118 | 5 | 10 | 231 | 13 | 263 | 2.93e-58 | 196 |
| Msa0670920 | MtrunA17_Chr4g0009991 | 78.151 | 119 | 23 | 2 | 101 | 219 | 1 | 116 | 1.54e-57 | 181 |
| Msa0670920 | MtrunA17_Chr8g0376881 | 39.695 | 262 | 125 | 6 | 9 | 239 | 24 | 283 | 5.64e-56 | 189 |
| Msa0670920 | MtrunA17_Chr4g0067981 | 38.868 | 265 | 133 | 4 | 10 | 248 | 31 | 292 | 3.48e-55 | 190 |
| Msa0670920 | MtrunA17_Chr2g0294911 | 39.245 | 265 | 133 | 4 | 10 | 248 | 29 | 291 | 6.81e-55 | 188 |
| Msa0670920 | MtrunA17_Chr4g0010001 | 83.146 | 89 | 15 | 0 | 1 | 89 | 1 | 89 | 2.08e-51 | 164 |
| Msa0670920 | MtrunA17_Chr7g0275401 | 38.000 | 250 | 128 | 5 | 7 | 229 | 2 | 251 | 2.57e-51 | 171 |
| Msa0670920 | MtrunA17_Chr1g0149841 | 39.200 | 250 | 118 | 4 | 7 | 226 | 2 | 247 | 2.15e-50 | 174 |
| Msa0670920 | MtrunA17_Chr8g0391911 | 38.683 | 243 | 119 | 5 | 4 | 219 | 3 | 242 | 1.46e-49 | 165 |
| Msa0670920 | MtrunA17_Chr5g0423031 | 79.775 | 89 | 18 | 0 | 1 | 89 | 1 | 89 | 7.43e-47 | 156 |
| Msa0670920 | MtrunA17_Chr3g0137101 | 37.652 | 247 | 124 | 3 | 10 | 226 | 8 | 254 | 8.61e-47 | 167 |
| Msa0670920 | MtrunA17_Chr7g0275891 | 34.767 | 279 | 141 | 5 | 7 | 244 | 2 | 280 | 9.04e-47 | 160 |
| Msa0670920 | MtrunA17_Chr8g0383961 | 42.797 | 236 | 102 | 7 | 1 | 231 | 1 | 208 | 2.12e-46 | 157 |
| Msa0670920 | MtrunA17_Chr4g0074401 | 32.800 | 250 | 142 | 4 | 10 | 233 | 17 | 266 | 3.53e-42 | 153 |
| Msa0670920 | MtrunA17_Chr4g0074411 | 34.008 | 247 | 140 | 4 | 10 | 233 | 18 | 264 | 4.58e-42 | 153 |
| Msa0670920 | MtrunA17_Chr1g0149851 | 34.866 | 261 | 129 | 4 | 7 | 226 | 2 | 262 | 7.05e-42 | 152 |
| Msa0670920 | MtrunA17_Chr2g0304841 | 33.333 | 255 | 135 | 3 | 10 | 229 | 18 | 272 | 1.09e-41 | 153 |
| Msa0670920 | MtrunA17_Chr6g0456631 | 42.857 | 161 | 86 | 3 | 4 | 161 | 3 | 160 | 3.69e-39 | 135 |
| Msa0670920 | MtrunA17_Chr3g0134461 | 37.264 | 212 | 104 | 4 | 10 | 219 | 8 | 192 | 1.04e-38 | 135 |
| Msa0670920 | MtrunA17_Chr3g0134481 | 35.135 | 222 | 104 | 4 | 1 | 221 | 1 | 183 | 1.29e-36 | 129 |
| Msa0670920 | MtrunA17_Chr4g0074421 | 37.569 | 181 | 93 | 3 | 59 | 219 | 2 | 182 | 2.02e-36 | 129 |
| Msa0670920 | MtrunA17_Chr1g0149831 | 38.298 | 188 | 80 | 4 | 68 | 226 | 1 | 181 | 3.78e-32 | 119 |
| Msa0670920 | MtrunA17_Chr8g0350761 | 22.969 | 357 | 215 | 9 | 12 | 309 | 19 | 374 | 5.51e-21 | 92.8 |
| Msa0670920 | MtrunA17_Chr6g0473731 | 33.133 | 166 | 101 | 3 | 89 | 248 | 10 | 171 | 5.29e-20 | 90.1 |
| Msa0670920 | MtrunA17_Chr2g0324891 | 38.710 | 93 | 55 | 1 | 136 | 226 | 125 | 217 | 5.47e-14 | 72.0 |
| Msa0670920 | MtrunA17_Chr5g0417521 | 55.556 | 54 | 23 | 1 | 170 | 222 | 15 | 68 | 9.97e-14 | 70.9 |
| Msa0670920 | MtrunA17_Chr6g0461641 | 44.872 | 78 | 42 | 1 | 170 | 246 | 42 | 119 | 2.74e-13 | 69.7 |
| Msa0670920 | MtrunA17_Chr7g0261911 | 40.594 | 101 | 55 | 3 | 161 | 256 | 253 | 353 | 3.02e-13 | 70.1 |
| Msa0670920 | MtrunA17_Chr4g0040481 | 48.276 | 58 | 30 | 0 | 169 | 226 | 157 | 214 | 5.29e-13 | 69.3 |
| Msa0670920 | MtrunA17_Chr7g0254981 | 40.659 | 91 | 51 | 2 | 168 | 257 | 48 | 136 | 6.15e-13 | 67.8 |
| Msa0670920 | MtrunA17_Chr4g0042451 | 51.852 | 54 | 25 | 1 | 170 | 222 | 17 | 70 | 1.16e-12 | 67.8 |
| Msa0670920 | MtrunA17_Chr2g0321461 | 53.704 | 54 | 24 | 1 | 170 | 222 | 45 | 98 | 1.80e-12 | 67.4 |
| Msa0670920 | MtrunA17_Chr5g0400241 | 34.940 | 83 | 54 | 0 | 169 | 251 | 310 | 392 | 3.10e-12 | 67.0 |
| Msa0670920 | MtrunA17_Chr2g0291021 | 55.556 | 54 | 23 | 1 | 170 | 222 | 49 | 102 | 1.08e-11 | 64.7 |
| Msa0670920 | MtrunA17_Chr7g0274471 | 40.659 | 91 | 51 | 3 | 170 | 258 | 218 | 307 | 1.14e-11 | 65.1 |
| Msa0670920 | MtrunA17_Chr7g0255711 | 48.276 | 58 | 30 | 0 | 169 | 226 | 90 | 147 | 1.17e-11 | 64.3 |
| Msa0670920 | MtrunA17_Chr4g0054981 | 48.148 | 54 | 28 | 0 | 169 | 222 | 309 | 362 | 1.37e-11 | 65.1 |
| Msa0670920 | MtrunA17_Chr4g0031961 | 41.250 | 80 | 45 | 2 | 147 | 226 | 110 | 187 | 2.46e-11 | 63.5 |
| Msa0670920 | MtrunA17_Chr1g0198601 | 45.122 | 82 | 35 | 3 | 151 | 229 | 199 | 273 | 2.72e-11 | 63.9 |
| Msa0670920 | MtrunA17_Chr7g0242521 | 50.000 | 70 | 26 | 3 | 157 | 222 | 5 | 69 | 4.49e-11 | 62.0 |
| Msa0670920 | MtrunA17_Chr1g0190301 | 47.059 | 68 | 34 | 2 | 166 | 231 | 171 | 238 | 5.05e-11 | 63.2 |
| Msa0670920 | MtrunA17_Chr7g0258551 | 47.368 | 57 | 29 | 1 | 167 | 222 | 209 | 265 | 6.04e-11 | 62.8 |
| Msa0670920 | MtrunA17_Chr1g0175091 | 42.647 | 68 | 36 | 2 | 156 | 222 | 246 | 311 | 8.27e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670920 | AT2G01760.1 | 38.783 | 263 | 120 | 6 | 7 | 232 | 4 | 262 | 3.63e-55 | 184 |
| Msa0670920 | AT1G67710.1 | 39.700 | 267 | 125 | 9 | 11 | 243 | 8 | 272 | 1.15e-53 | 183 |
| Msa0670920 | AT3G16857.1 | 36.364 | 308 | 138 | 9 | 10 | 259 | 33 | 340 | 1.60e-51 | 180 |
| Msa0670920 | AT3G16857.2 | 36.364 | 308 | 138 | 9 | 10 | 259 | 33 | 340 | 1.89e-51 | 180 |
| Msa0670920 | AT2G01760.2 | 35.052 | 291 | 120 | 7 | 7 | 232 | 4 | 290 | 2.49e-49 | 169 |
| Msa0670920 | AT4G31920.1 | 36.910 | 233 | 137 | 2 | 10 | 232 | 13 | 245 | 5.81e-47 | 166 |
| Msa0670920 | AT2G25180.1 | 38.750 | 240 | 123 | 6 | 10 | 226 | 13 | 251 | 1.30e-43 | 157 |
| Msa0670920 | AT3G16857.3 | 35.316 | 269 | 116 | 9 | 49 | 259 | 2 | 270 | 1.06e-40 | 150 |
| Msa0670920 | AT5G58080.1 | 37.008 | 254 | 126 | 7 | 10 | 236 | 14 | 260 | 5.37e-39 | 145 |
| Msa0670920 | AT1G67710.2 | 39.713 | 209 | 91 | 8 | 68 | 243 | 1 | 207 | 4.58e-36 | 135 |
| Msa0670920 | AT2G01760.3 | 36.318 | 201 | 88 | 5 | 68 | 232 | 1 | 197 | 3.39e-35 | 130 |
| Msa0670920 | AT5G49240.1 | 31.356 | 236 | 137 | 5 | 9 | 219 | 37 | 272 | 8.08e-34 | 125 |
| Msa0670920 | AT3G62670.1 | 30.258 | 271 | 159 | 9 | 28 | 272 | 53 | 319 | 2.84e-32 | 124 |
| Msa0670920 | AT1G49190.1 | 27.734 | 256 | 154 | 6 | 10 | 234 | 30 | 285 | 1.94e-28 | 113 |
| Msa0670920 | AT1G67710.3 | 38.095 | 189 | 82 | 8 | 88 | 243 | 12 | 198 | 5.16e-27 | 110 |
| Msa0670920 | AT5G07210.2 | 28.148 | 270 | 140 | 7 | 14 | 231 | 16 | 283 | 1.76e-26 | 109 |
| Msa0670920 | AT5G07210.1 | 27.338 | 278 | 140 | 8 | 14 | 231 | 16 | 291 | 5.66e-24 | 102 |
| Msa0670920 | AT2G27070.1 | 25.758 | 264 | 139 | 8 | 14 | 222 | 16 | 277 | 2.96e-20 | 91.7 |
| Msa0670920 | AT1G49190.2 | 32.258 | 124 | 83 | 1 | 10 | 132 | 30 | 153 | 1.72e-17 | 83.6 |
| Msa0670920 | AT5G29000.4 | 44.086 | 93 | 47 | 3 | 148 | 238 | 212 | 301 | 1.67e-15 | 76.3 |
| Msa0670920 | AT5G29000.2 | 42.000 | 100 | 53 | 3 | 148 | 245 | 212 | 308 | 2.07e-15 | 76.6 |
| Msa0670920 | AT5G29000.1 | 42.000 | 100 | 53 | 3 | 148 | 245 | 169 | 265 | 2.41e-15 | 76.3 |
| Msa0670920 | AT5G29000.3 | 42.000 | 100 | 53 | 3 | 148 | 245 | 169 | 265 | 2.41e-15 | 76.3 |
| Msa0670920 | AT5G44190.1 | 48.333 | 60 | 31 | 0 | 167 | 226 | 144 | 203 | 1.27e-13 | 71.2 |
| Msa0670920 | AT5G44190.2 | 48.333 | 60 | 31 | 0 | 167 | 226 | 144 | 203 | 1.39e-13 | 70.9 |
| Msa0670920 | AT3G04030.1 | 55.556 | 54 | 23 | 1 | 170 | 222 | 45 | 98 | 3.69e-13 | 69.7 |
| Msa0670920 | AT3G04030.3 | 55.556 | 54 | 23 | 1 | 170 | 222 | 45 | 98 | 4.30e-13 | 69.7 |
| Msa0670920 | AT4G28610.1 | 47.126 | 87 | 40 | 4 | 170 | 252 | 225 | 309 | 6.83e-13 | 69.3 |
| Msa0670920 | AT5G18240.2 | 55.556 | 54 | 23 | 1 | 170 | 222 | 45 | 98 | 7.39e-13 | 68.9 |
| Msa0670920 | AT5G18240.3 | 55.556 | 54 | 23 | 1 | 170 | 222 | 45 | 98 | 7.39e-13 | 68.9 |
| Msa0670920 | AT5G18240.5 | 55.556 | 54 | 23 | 1 | 170 | 222 | 45 | 98 | 8.76e-13 | 68.9 |
| Msa0670920 | AT5G18240.1 | 55.556 | 54 | 23 | 1 | 170 | 222 | 45 | 98 | 8.90e-13 | 68.9 |
| Msa0670920 | AT5G18240.4 | 55.556 | 54 | 23 | 1 | 170 | 222 | 45 | 98 | 8.90e-13 | 68.9 |
| Msa0670920 | AT2G01060.1 | 45.783 | 83 | 42 | 2 | 159 | 238 | 4 | 86 | 1.22e-12 | 67.4 |
| Msa0670920 | AT5G59570.2 | 42.105 | 76 | 41 | 1 | 151 | 226 | 125 | 197 | 1.51e-12 | 67.4 |
| Msa0670920 | AT5G59570.1 | 42.105 | 76 | 41 | 1 | 151 | 226 | 125 | 197 | 1.51e-12 | 67.4 |
| Msa0670920 | AT3G04450.3 | 48.276 | 58 | 29 | 1 | 166 | 222 | 234 | 291 | 1.83e-12 | 67.4 |
| Msa0670920 | AT3G04030.2 | 52.830 | 53 | 25 | 0 | 170 | 222 | 45 | 97 | 2.43e-12 | 67.4 |
| Msa0670920 | AT3G46640.2 | 43.210 | 81 | 43 | 2 | 146 | 226 | 123 | 200 | 2.92e-12 | 66.6 |
| Msa0670920 | AT3G46640.1 | 43.210 | 81 | 43 | 2 | 146 | 226 | 123 | 200 | 2.92e-12 | 66.6 |
| Msa0670920 | AT3G46640.3 | 43.210 | 81 | 43 | 2 | 146 | 226 | 123 | 200 | 3.23e-12 | 66.6 |
| Msa0670920 | AT3G04450.1 | 48.276 | 58 | 29 | 1 | 166 | 222 | 234 | 291 | 3.49e-12 | 67.0 |
| Msa0670920 | AT3G04450.4 | 48.276 | 58 | 29 | 1 | 166 | 222 | 194 | 251 | 4.07e-12 | 66.6 |
| Msa0670920 | AT3G04450.2 | 48.276 | 58 | 29 | 1 | 166 | 222 | 194 | 251 | 4.07e-12 | 66.6 |
| Msa0670920 | AT1G69580.1 | 51.852 | 54 | 25 | 1 | 170 | 222 | 34 | 87 | 6.22e-12 | 65.9 |
| Msa0670920 | AT1G69580.2 | 51.852 | 54 | 25 | 1 | 170 | 222 | 34 | 87 | 6.67e-12 | 65.9 |
| Msa0670920 | AT2G20570.1 | 46.552 | 58 | 31 | 0 | 169 | 226 | 152 | 209 | 7.12e-12 | 66.2 |
| Msa0670920 | AT2G40970.1 | 46.552 | 58 | 31 | 0 | 169 | 226 | 104 | 161 | 1.11e-11 | 64.3 |
| Msa0670920 | AT3G10760.1 | 48.276 | 58 | 30 | 0 | 169 | 226 | 104 | 161 | 1.19e-11 | 65.1 |
| Msa0670920 | AT5G05090.1 | 48.276 | 58 | 30 | 0 | 169 | 226 | 80 | 137 | 1.44e-11 | 64.3 |
| Msa0670920 | AT4G18020.8 | 36.842 | 76 | 45 | 1 | 152 | 227 | 281 | 353 | 1.73e-11 | 65.1 |
| Msa0670920 | AT4G18020.11 | 36.842 | 76 | 45 | 1 | 152 | 227 | 281 | 353 | 1.73e-11 | 65.1 |
| Msa0670920 | AT4G18020.4 | 36.842 | 76 | 45 | 1 | 152 | 227 | 281 | 353 | 1.73e-11 | 65.1 |
| Msa0670920 | AT4G18020.5 | 36.842 | 76 | 45 | 1 | 152 | 227 | 281 | 353 | 1.73e-11 | 65.1 |
| Msa0670920 | AT4G18020.10 | 36.842 | 76 | 45 | 1 | 152 | 227 | 281 | 353 | 1.73e-11 | 65.1 |
| Msa0670920 | AT4G18020.7 | 36.842 | 76 | 45 | 1 | 152 | 227 | 281 | 353 | 1.73e-11 | 65.1 |
| Msa0670920 | AT4G18020.3 | 36.842 | 76 | 45 | 1 | 152 | 227 | 281 | 353 | 1.96e-11 | 65.1 |
| Msa0670920 | AT4G18020.2 | 36.842 | 76 | 45 | 1 | 152 | 227 | 281 | 353 | 1.96e-11 | 65.1 |
| Msa0670920 | AT4G18020.1 | 36.842 | 76 | 45 | 1 | 152 | 227 | 281 | 353 | 1.96e-11 | 65.1 |
| Msa0670920 | AT4G18020.6 | 36.842 | 76 | 45 | 1 | 152 | 227 | 281 | 353 | 1.96e-11 | 65.1 |
| Msa0670920 | AT4G18020.9 | 36.842 | 76 | 45 | 1 | 152 | 227 | 281 | 353 | 1.96e-11 | 65.1 |
| Msa0670920 | AT2G20570.2 | 47.273 | 55 | 29 | 0 | 172 | 226 | 171 | 225 | 4.46e-11 | 63.9 |
| Msa0670920 | AT3G24120.1 | 48.529 | 68 | 31 | 2 | 170 | 233 | 41 | 108 | 6.71e-11 | 62.4 |
| Msa0670920 | AT3G24120.2 | 48.529 | 68 | 31 | 2 | 170 | 233 | 41 | 108 | 6.85e-11 | 62.4 |
| Msa0670920 | AT2G06020.1 | 33.621 | 116 | 60 | 3 | 116 | 222 | 32 | 139 | 8.03e-11 | 62.4 |
| Msa0670920 | AT4G04605.1 | 46.970 | 66 | 33 | 2 | 168 | 231 | 12 | 77 | 9.45e-11 | 61.2 |
Find 60 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATTGTGTCGCAGAATTC+AGG | 0.268438 | 4_4:-13787946 | None:intergenic |
| ACATATTGCCAGCCATTTAC+AGG | 0.282271 | 4_4:+13787440 | Msa0670920:CDS |
| TTCAGTTACCAAATGTAGTA+TGG | 0.293347 | 4_4:+13786715 | Msa0670920:intron |
| CAACGACATTGGGTGGAAAT+TGG | 0.345706 | 4_4:+13787986 | Msa0670920:CDS |
| TGAGTTGTAGGGTAACATTT+TGG | 0.376494 | 4_4:-13786832 | None:intergenic |
| GATAAATCATCATCAACATA+TGG | 0.380393 | 4_4:-13788058 | None:intergenic |
| AATGTGGGGCTTGCGAATAT+TGG | 0.385194 | 4_4:+13787028 | Msa0670920:CDS |
| CGAATATTGGACTAAGCCTT+TGG | 0.392176 | 4_4:+13787041 | Msa0670920:CDS |
| TGACAGGAATGTTGAGTTGT+AGG | 0.408636 | 4_4:-13786844 | None:intergenic |
| ATCAGAAGCCATACTACATT+TGG | 0.409595 | 4_4:-13786723 | None:intergenic |
| CTTTCTTTCCAACATGTTGA+AGG | 0.419409 | 4_4:-13786747 | None:intergenic |
| CAAAGAAGGCCCGTTTGTCT+TGG | 0.435563 | 4_4:+13787217 | Msa0670920:CDS |
| AAAAGAAACACTTGCAAAGA+AGG | 0.435703 | 4_4:+13787203 | Msa0670920:CDS |
| CGAGACCGGCTGGGAATGTT+GGG | 0.438211 | 4_4:-13786518 | None:intergenic |
| GGTTCAAGAAAATAGAAAAC+GGG | 0.441425 | 4_4:+13787158 | Msa0670920:CDS |
| GCAATAACCTCGAGACCGGC+TGG | 0.445702 | 4_4:-13786528 | None:intergenic |
| TTGCGATGCACAACGACATT+GGG | 0.452490 | 4_4:+13787976 | Msa0670920:CDS |
| CTTCAACATGTTGGAAAGAA+AGG | 0.459586 | 4_4:+13786748 | Msa0670920:CDS |
| AATAAATTCTTACTAATGAC+AGG | 0.461511 | 4_4:-13786860 | None:intergenic |
| AATAAAGAATATGAAAATGT+TGG | 0.463084 | 4_4:+13787126 | Msa0670920:CDS |
| TTCTCGTGACCAAGACAAAC+GGG | 0.467708 | 4_4:-13787226 | None:intergenic |
| TCGAGACCGGCTGGGAATGT+TGG | 0.467950 | 4_4:-13786519 | None:intergenic |
| TCAACATATGGGAACAAGTT+GGG | 0.468173 | 4_4:-13788046 | None:intergenic |
| TACTCACTCAATGCCGGAGC+AGG | 0.473606 | 4_4:+13787910 | Msa0670920:CDS |
| TGTTGGGTTATCAGTGAAAC+GGG | 0.473997 | 4_4:-13786502 | None:intergenic |
| AAAAGTGTTGCTCATAATGT+TGG | 0.490442 | 4_4:-13788014 | None:intergenic |
| AAGTCATAAACATCCATGTC+TGG | 0.491105 | 4_4:-13786806 | None:intergenic |
| CACTTTCCTCAACTCTATTG+AGG | 0.492388 | 4_4:+13786566 | Msa0670920:CDS |
| TGGTTCAAGAAAATAGAAAA+CGG | 0.501089 | 4_4:+13787157 | Msa0670920:CDS |
| AGGAAAGAATCATACTATCA+AGG | 0.510494 | 4_4:-13787287 | None:intergenic |
| ATTGCGATGCACAACGACAT+TGG | 0.516098 | 4_4:+13787975 | Msa0670920:CDS |
| ATGTTGGGTTATCAGTGAAA+CGG | 0.516952 | 4_4:-13786503 | None:intergenic |
| TGTAATCGATATCATTATCA+AGG | 0.517908 | 4_4:+13786594 | Msa0670920:CDS |
| GACAGGAATGTTGAGTTGTA+GGG | 0.519779 | 4_4:-13786843 | None:intergenic |
| ATCATGAAGTCTATTGAATG+TGG | 0.526495 | 4_4:+13787012 | Msa0670920:CDS |
| ATTCTCGTGACCAAGACAAA+CGG | 0.526657 | 4_4:-13787227 | None:intergenic |
| AAAATGAACCTGTAAATGGC+TGG | 0.527802 | 4_4:-13787448 | None:intergenic |
| TTCTGATGCCTTCAACATGT+TGG | 0.527887 | 4_4:+13786739 | Msa0670920:CDS |
| CATGTTGCAAGAATTAGAAA+CGG | 0.528421 | 4_4:+13787093 | Msa0670920:CDS |
| ATATGAAAATGTTGGAAGCT+CGG | 0.535763 | 4_4:+13787134 | Msa0670920:CDS |
| CTACGTGCAGTCAATCAACT+AGG | 0.547867 | 4_4:+13787264 | Msa0670920:CDS |
| ATAAATCATCATCAACATAT+GGG | 0.548211 | 4_4:-13788057 | None:intergenic |
| AGCTCAACAGAAGAGACAAA+AGG | 0.548661 | 4_4:+13787833 | Msa0670920:CDS |
| AGAAAACTCTGGTCCTGCTC+CGG | 0.548712 | 4_4:-13787923 | None:intergenic |
| TCATGAAGTCTATTGAATGT+GGG | 0.549366 | 4_4:+13787013 | Msa0670920:CDS |
| AATTGCAATAACCTCGAGAC+CGG | 0.556151 | 4_4:-13786532 | None:intergenic |
| ATCAACATATGGGAACAAGT+TGG | 0.563419 | 4_4:-13788047 | None:intergenic |
| CGATGCACAACGACATTGGG+TGG | 0.580466 | 4_4:+13787979 | Msa0670920:CDS |
| AGAAGCTACTCACTCAATGC+CGG | 0.591913 | 4_4:+13787904 | Msa0670920:CDS |
| CAATAACCTCGAGACCGGCT+GGG | 0.602751 | 4_4:-13786527 | None:intergenic |
| AACATTCCCAGCCGGTCTCG+AGG | 0.602762 | 4_4:+13786521 | Msa0670920:CDS |
| CAGAATTCAGGAGAAAACTC+TGG | 0.602905 | 4_4:-13787934 | None:intergenic |
| CATGAAGTCTATTGAATGTG+GGG | 0.606058 | 4_4:+13787014 | Msa0670920:CDS |
| CAACAGAAGAGACAAAAGGT+AGG | 0.617016 | 4_4:+13787837 | Msa0670920:CDS |
| ACATCTCCTCAATAGAGTTG+AGG | 0.625514 | 4_4:-13786572 | None:intergenic |
| TGATGCTCATATGCCAGACA+TGG | 0.629107 | 4_4:+13786793 | Msa0670920:CDS |
| GATAACCCAACATTCCCAGC+CGG | 0.655532 | 4_4:+13786513 | Msa0670920:CDS |
| TGAAAATGTTGGAAGCTCGG+TGG | 0.688521 | 4_4:+13787137 | Msa0670920:CDS |
| ATGATTTATCATCACTTGTG+TGG | 0.696325 | 4_4:+13788071 | Msa0670920:CDS |
| GTTCAAGAAAATAGAAAACG+GGG | 0.742093 | 4_4:+13787159 | Msa0670920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAGAATATGAAAATGT+TGG | + | chr4_4:13787126-13787145 | Msa0670920:CDS | 15.0% |
| !!! | AATATGTTCTTTTTTCATAT+CGG | - | chr4_4:13787427-13787446 | None:intergenic | 15.0% |
| !!! | TGATTTTAAACTGAAATTTA+CGG | + | chr4_4:13787748-13787767 | Msa0670920:intron | 15.0% |
| !! | AATAAAGAATATGAAAATGT+TGG | + | chr4_4:13787126-13787145 | Msa0670920:CDS | 15.0% |
| !!! | AATATGTTCTTTTTTCATAT+CGG | - | chr4_4:13787427-13787446 | None:intergenic | 15.0% |
| !!! | TGATTTTAAACTGAAATTTA+CGG | + | chr4_4:13787748-13787767 | Msa0670920:intron | 15.0% |
| !! | AAAAGATGAAAACTTGAATA+AGG | - | chr4_4:13786637-13786656 | None:intergenic | 20.0% |
| !!! | ATTCAAGTTTTCATCTTTTT+TGG | + | chr4_4:13786638-13786657 | Msa0670920:intron | 20.0% |
| !! | CAATATAAGAATAAACAAAC+AGG | - | chr4_4:13786690-13786709 | None:intergenic | 20.0% |
| !! | AATAAATTCTTACTAATGAC+AGG | - | chr4_4:13786863-13786882 | None:intergenic | 20.0% |
| !!! | ATATTTCTTTTTTGTAGTGA+TGG | + | chr4_4:13786966-13786985 | Msa0670920:intron | 20.0% |
| !! | AGCATAGTAAAAAAGTAATT+AGG | - | chr4_4:13787310-13787329 | None:intergenic | 20.0% |
| !!! | ATGTTTTTCTCTTAATTTTC+AGG | + | chr4_4:13787363-13787382 | Msa0670920:intron | 20.0% |
| !!! | TGTTTTTCTCTTAATTTTCA+GGG | + | chr4_4:13787364-13787383 | Msa0670920:intron | 20.0% |
| !!! | ATGATTTTCAGAATCTTTTT+TGG | - | chr4_4:13787396-13787415 | None:intergenic | 20.0% |
| !!! | AAAAAAGATTCTGAAAATCA+TGG | + | chr4_4:13787395-13787414 | Msa0670920:CDS | 20.0% |
| !!! | ATATGTTCTTTTTTCATATC+GGG | - | chr4_4:13787426-13787445 | None:intergenic | 20.0% |
| !!! | TTTTGCAGAAATATAGAAAT+CGG | + | chr4_4:13787804-13787823 | Msa0670920:intron | 20.0% |
| !! | ATAAATCATCATCAACATAT+GGG | - | chr4_4:13788060-13788079 | None:intergenic | 20.0% |
| !! | AAAAGATGAAAACTTGAATA+AGG | - | chr4_4:13786637-13786656 | None:intergenic | 20.0% |
| !!! | ATTCAAGTTTTCATCTTTTT+TGG | + | chr4_4:13786638-13786657 | Msa0670920:intron | 20.0% |
| !! | CAATATAAGAATAAACAAAC+AGG | - | chr4_4:13786690-13786709 | None:intergenic | 20.0% |
| !! | AATAAATTCTTACTAATGAC+AGG | - | chr4_4:13786863-13786882 | None:intergenic | 20.0% |
| !!! | ATATTTCTTTTTTGTAGTGA+TGG | + | chr4_4:13786966-13786985 | Msa0670920:intron | 20.0% |
| !! | AGCATAGTAAAAAAGTAATT+AGG | - | chr4_4:13787310-13787329 | None:intergenic | 20.0% |
| !!! | ATGTTTTTCTCTTAATTTTC+AGG | + | chr4_4:13787363-13787382 | Msa0670920:intron | 20.0% |
| !!! | TGTTTTTCTCTTAATTTTCA+GGG | + | chr4_4:13787364-13787383 | Msa0670920:intron | 20.0% |
| !!! | ATGATTTTCAGAATCTTTTT+TGG | - | chr4_4:13787396-13787415 | None:intergenic | 20.0% |
| !!! | AAAAAAGATTCTGAAAATCA+TGG | + | chr4_4:13787395-13787414 | Msa0670920:CDS | 20.0% |
| !!! | ATATGTTCTTTTTTCATATC+GGG | - | chr4_4:13787426-13787445 | None:intergenic | 20.0% |
| !!! | TTTTGCAGAAATATAGAAAT+CGG | + | chr4_4:13787804-13787823 | Msa0670920:intron | 20.0% |
| !! | ATAAATCATCATCAACATAT+GGG | - | chr4_4:13788060-13788079 | None:intergenic | 20.0% |
| ! | TGTAATCGATATCATTATCA+AGG | + | chr4_4:13786594-13786613 | Msa0670920:CDS | 25.0% |
| ! | TGGTTCAAGAAAATAGAAAA+CGG | + | chr4_4:13787157-13787176 | Msa0670920:CDS | 25.0% |
| !! | GTTTTTCTCTTAATTTTCAG+GGG | + | chr4_4:13787365-13787384 | Msa0670920:intron | 25.0% |
| ! | TACAAAAATGAACCTGTAAA+TGG | - | chr4_4:13787455-13787474 | None:intergenic | 25.0% |
| ! | AGTAGTATATTATCAACAAG+AGG | - | chr4_4:13787717-13787736 | None:intergenic | 25.0% |
| !!! | AAGTCAAATTTTGTTTCAAG+AGG | - | chr4_4:13787884-13787903 | None:intergenic | 25.0% |
| ! | GATAAATCATCATCAACATA+TGG | - | chr4_4:13788061-13788080 | None:intergenic | 25.0% |
| ! | TGTAATCGATATCATTATCA+AGG | + | chr4_4:13786594-13786613 | Msa0670920:CDS | 25.0% |
| ! | TGGTTCAAGAAAATAGAAAA+CGG | + | chr4_4:13787157-13787176 | Msa0670920:CDS | 25.0% |
| !! | GTTTTTCTCTTAATTTTCAG+GGG | + | chr4_4:13787365-13787384 | Msa0670920:intron | 25.0% |
| ! | TACAAAAATGAACCTGTAAA+TGG | - | chr4_4:13787455-13787474 | None:intergenic | 25.0% |
| ! | AGTAGTATATTATCAACAAG+AGG | - | chr4_4:13787717-13787736 | None:intergenic | 25.0% |
| !!! | AAGTCAAATTTTGTTTCAAG+AGG | - | chr4_4:13787884-13787903 | None:intergenic | 25.0% |
| ! | GATAAATCATCATCAACATA+TGG | - | chr4_4:13788061-13788080 | None:intergenic | 25.0% |
| TTCAGTTACCAAATGTAGTA+TGG | + | chr4_4:13786715-13786734 | Msa0670920:intron | 30.0% | |
| ! | CTTCATGATAGAACTTTTTG+TGG | - | chr4_4:13787001-13787020 | None:intergenic | 30.0% |
| ATCATGAAGTCTATTGAATG+TGG | + | chr4_4:13787012-13787031 | Msa0670920:CDS | 30.0% | |
| TCATGAAGTCTATTGAATGT+GGG | + | chr4_4:13787013-13787032 | Msa0670920:CDS | 30.0% | |
| CATGTTGCAAGAATTAGAAA+CGG | + | chr4_4:13787093-13787112 | Msa0670920:CDS | 30.0% | |
| ATATGAAAATGTTGGAAGCT+CGG | + | chr4_4:13787134-13787153 | Msa0670920:CDS | 30.0% | |
| GGTTCAAGAAAATAGAAAAC+GGG | + | chr4_4:13787158-13787177 | Msa0670920:CDS | 30.0% | |
| GTTCAAGAAAATAGAAAACG+GGG | + | chr4_4:13787159-13787178 | Msa0670920:CDS | 30.0% | |
| AAAAGAAACACTTGCAAAGA+AGG | + | chr4_4:13787203-13787222 | Msa0670920:CDS | 30.0% | |
| AGGAAAGAATCATACTATCA+AGG | - | chr4_4:13787290-13787309 | None:intergenic | 30.0% | |
| AAAAGATAACTGACAAACCT+AGG | - | chr4_4:13787531-13787550 | None:intergenic | 30.0% | |
| TGATTTACAACAACAGACTT+AGG | - | chr4_4:13787555-13787574 | None:intergenic | 30.0% | |
| TTGAATAACATGCAAGACTA+AGG | - | chr4_4:13787593-13787612 | None:intergenic | 30.0% | |
| !! | AAAAGTGTTGCTCATAATGT+TGG | - | chr4_4:13788017-13788036 | None:intergenic | 30.0% |
| ATGATTTATCATCACTTGTG+TGG | + | chr4_4:13788071-13788090 | Msa0670920:CDS | 30.0% | |
| TTCAGTTACCAAATGTAGTA+TGG | + | chr4_4:13786715-13786734 | Msa0670920:intron | 30.0% | |
| ! | CTTCATGATAGAACTTTTTG+TGG | - | chr4_4:13787001-13787020 | None:intergenic | 30.0% |
| ATCATGAAGTCTATTGAATG+TGG | + | chr4_4:13787012-13787031 | Msa0670920:CDS | 30.0% | |
| TCATGAAGTCTATTGAATGT+GGG | + | chr4_4:13787013-13787032 | Msa0670920:CDS | 30.0% | |
| CATGTTGCAAGAATTAGAAA+CGG | + | chr4_4:13787093-13787112 | Msa0670920:CDS | 30.0% | |
| ATATGAAAATGTTGGAAGCT+CGG | + | chr4_4:13787134-13787153 | Msa0670920:CDS | 30.0% | |
| GGTTCAAGAAAATAGAAAAC+GGG | + | chr4_4:13787158-13787177 | Msa0670920:CDS | 30.0% | |
| GTTCAAGAAAATAGAAAACG+GGG | + | chr4_4:13787159-13787178 | Msa0670920:CDS | 30.0% | |
| AAAAGAAACACTTGCAAAGA+AGG | + | chr4_4:13787203-13787222 | Msa0670920:CDS | 30.0% | |
| AGGAAAGAATCATACTATCA+AGG | - | chr4_4:13787290-13787309 | None:intergenic | 30.0% | |
| AAAAGATAACTGACAAACCT+AGG | - | chr4_4:13787531-13787550 | None:intergenic | 30.0% | |
| TGATTTACAACAACAGACTT+AGG | - | chr4_4:13787555-13787574 | None:intergenic | 30.0% | |
| TTGAATAACATGCAAGACTA+AGG | - | chr4_4:13787593-13787612 | None:intergenic | 30.0% | |
| !! | AAAAGTGTTGCTCATAATGT+TGG | - | chr4_4:13788017-13788036 | None:intergenic | 30.0% |
| ATGATTTATCATCACTTGTG+TGG | + | chr4_4:13788071-13788090 | Msa0670920:CDS | 30.0% | |
| ATGTTGGGTTATCAGTGAAA+CGG | - | chr4_4:13786506-13786525 | None:intergenic | 35.0% | |
| ATCAGAAGCCATACTACATT+TGG | - | chr4_4:13786726-13786745 | None:intergenic | 35.0% | |
| CTTTCTTTCCAACATGTTGA+AGG | - | chr4_4:13786750-13786769 | None:intergenic | 35.0% | |
| CTTCAACATGTTGGAAAGAA+AGG | + | chr4_4:13786748-13786767 | Msa0670920:CDS | 35.0% | |
| AAGTCATAAACATCCATGTC+TGG | - | chr4_4:13786809-13786828 | None:intergenic | 35.0% | |
| ! | TGAGTTGTAGGGTAACATTT+TGG | - | chr4_4:13786835-13786854 | None:intergenic | 35.0% |
| CATGAAGTCTATTGAATGTG+GGG | + | chr4_4:13787014-13787033 | Msa0670920:CDS | 35.0% | |
| TAAGCCTTTGGTTGAAAAAG+AGG | + | chr4_4:13787053-13787072 | Msa0670920:CDS | 35.0% | |
| !!! | TTGACCTCTTTTTCAACCAA+AGG | - | chr4_4:13787060-13787079 | None:intergenic | 35.0% |
| AAAAAGAGGTCAAGATCATG+TGG | + | chr4_4:13787067-13787086 | Msa0670920:CDS | 35.0% | |
| ! | CTTTGCAAGTGTTTCTTTTG+AGG | - | chr4_4:13787202-13787221 | None:intergenic | 35.0% |
| AAAATGAACCTGTAAATGGC+TGG | - | chr4_4:13787451-13787470 | None:intergenic | 35.0% | |
| ACCAAAGTCTATATTTGCCT+AGG | + | chr4_4:13787511-13787530 | Msa0670920:intron | 35.0% | |
| ACCTAGGCAAATATAGACTT+TGG | - | chr4_4:13787515-13787534 | None:intergenic | 35.0% | |
| AGTAGTGAATTATGCAGTCA+TGG | + | chr4_4:13787629-13787648 | Msa0670920:intron | 35.0% | |
| AGAGGATGTATAGAAGCTAA+TGG | - | chr4_4:13787699-13787718 | None:intergenic | 35.0% | |
| TCAACATATGGGAACAAGTT+GGG | - | chr4_4:13788049-13788068 | None:intergenic | 35.0% | |
| ATCAACATATGGGAACAAGT+TGG | - | chr4_4:13788050-13788069 | None:intergenic | 35.0% | |
| ATGTTGGGTTATCAGTGAAA+CGG | - | chr4_4:13786506-13786525 | None:intergenic | 35.0% | |
| ATCAGAAGCCATACTACATT+TGG | - | chr4_4:13786726-13786745 | None:intergenic | 35.0% | |
| CTTTCTTTCCAACATGTTGA+AGG | - | chr4_4:13786750-13786769 | None:intergenic | 35.0% | |
| CTTCAACATGTTGGAAAGAA+AGG | + | chr4_4:13786748-13786767 | Msa0670920:CDS | 35.0% | |
| AAGTCATAAACATCCATGTC+TGG | - | chr4_4:13786809-13786828 | None:intergenic | 35.0% | |
| ! | TGAGTTGTAGGGTAACATTT+TGG | - | chr4_4:13786835-13786854 | None:intergenic | 35.0% |
| CATGAAGTCTATTGAATGTG+GGG | + | chr4_4:13787014-13787033 | Msa0670920:CDS | 35.0% | |
| TAAGCCTTTGGTTGAAAAAG+AGG | + | chr4_4:13787053-13787072 | Msa0670920:CDS | 35.0% | |
| !!! | TTGACCTCTTTTTCAACCAA+AGG | - | chr4_4:13787060-13787079 | None:intergenic | 35.0% |
| AAAAAGAGGTCAAGATCATG+TGG | + | chr4_4:13787067-13787086 | Msa0670920:CDS | 35.0% | |
| ! | CTTTGCAAGTGTTTCTTTTG+AGG | - | chr4_4:13787202-13787221 | None:intergenic | 35.0% |
| AAAATGAACCTGTAAATGGC+TGG | - | chr4_4:13787451-13787470 | None:intergenic | 35.0% | |
| ACCAAAGTCTATATTTGCCT+AGG | + | chr4_4:13787511-13787530 | Msa0670920:intron | 35.0% | |
| ACCTAGGCAAATATAGACTT+TGG | - | chr4_4:13787515-13787534 | None:intergenic | 35.0% | |
| AGTAGTGAATTATGCAGTCA+TGG | + | chr4_4:13787629-13787648 | Msa0670920:intron | 35.0% | |
| AGAGGATGTATAGAAGCTAA+TGG | - | chr4_4:13787699-13787718 | None:intergenic | 35.0% | |
| TCAACATATGGGAACAAGTT+GGG | - | chr4_4:13788049-13788068 | None:intergenic | 35.0% | |
| ATCAACATATGGGAACAAGT+TGG | - | chr4_4:13788050-13788069 | None:intergenic | 35.0% | |
| TGTTGGGTTATCAGTGAAAC+GGG | - | chr4_4:13786505-13786524 | None:intergenic | 40.0% | |
| AATTGCAATAACCTCGAGAC+CGG | - | chr4_4:13786535-13786554 | None:intergenic | 40.0% | |
| CACTTTCCTCAACTCTATTG+AGG | + | chr4_4:13786566-13786585 | Msa0670920:CDS | 40.0% | |
| ACATCTCCTCAATAGAGTTG+AGG | - | chr4_4:13786575-13786594 | None:intergenic | 40.0% | |
| TTCTGATGCCTTCAACATGT+TGG | + | chr4_4:13786739-13786758 | Msa0670920:CDS | 40.0% | |
| ! | GACAGGAATGTTGAGTTGTA+GGG | - | chr4_4:13786846-13786865 | None:intergenic | 40.0% |
| ! | TGACAGGAATGTTGAGTTGT+AGG | - | chr4_4:13786847-13786866 | None:intergenic | 40.0% |
| CGAATATTGGACTAAGCCTT+TGG | + | chr4_4:13787041-13787060 | Msa0670920:CDS | 40.0% | |
| ATTCTCGTGACCAAGACAAA+CGG | - | chr4_4:13787230-13787249 | None:intergenic | 40.0% | |
| ACATATTGCCAGCCATTTAC+AGG | + | chr4_4:13787440-13787459 | Msa0670920:CDS | 40.0% | |
| AGCTCAACAGAAGAGACAAA+AGG | + | chr4_4:13787833-13787852 | Msa0670920:CDS | 40.0% | |
| CAACAGAAGAGACAAAAGGT+AGG | + | chr4_4:13787837-13787856 | Msa0670920:CDS | 40.0% | |
| CAGAATTCAGGAGAAAACTC+TGG | - | chr4_4:13787937-13787956 | None:intergenic | 40.0% | |
| TGTTGGGTTATCAGTGAAAC+GGG | - | chr4_4:13786505-13786524 | None:intergenic | 40.0% | |
| AATTGCAATAACCTCGAGAC+CGG | - | chr4_4:13786535-13786554 | None:intergenic | 40.0% | |
| CACTTTCCTCAACTCTATTG+AGG | + | chr4_4:13786566-13786585 | Msa0670920:CDS | 40.0% | |
| ACATCTCCTCAATAGAGTTG+AGG | - | chr4_4:13786575-13786594 | None:intergenic | 40.0% | |
| TTCTGATGCCTTCAACATGT+TGG | + | chr4_4:13786739-13786758 | Msa0670920:CDS | 40.0% | |
| ! | GACAGGAATGTTGAGTTGTA+GGG | - | chr4_4:13786846-13786865 | None:intergenic | 40.0% |
| ! | TGACAGGAATGTTGAGTTGT+AGG | - | chr4_4:13786847-13786866 | None:intergenic | 40.0% |
| CGAATATTGGACTAAGCCTT+TGG | + | chr4_4:13787041-13787060 | Msa0670920:CDS | 40.0% | |
| ATTCTCGTGACCAAGACAAA+CGG | - | chr4_4:13787230-13787249 | None:intergenic | 40.0% | |
| ACATATTGCCAGCCATTTAC+AGG | + | chr4_4:13787440-13787459 | Msa0670920:CDS | 40.0% | |
| AGCTCAACAGAAGAGACAAA+AGG | + | chr4_4:13787833-13787852 | Msa0670920:CDS | 40.0% | |
| CAACAGAAGAGACAAAAGGT+AGG | + | chr4_4:13787837-13787856 | Msa0670920:CDS | 40.0% | |
| CAGAATTCAGGAGAAAACTC+TGG | - | chr4_4:13787937-13787956 | None:intergenic | 40.0% | |
| TGATGCTCATATGCCAGACA+TGG | + | chr4_4:13786793-13786812 | Msa0670920:CDS | 45.0% | |
| AATGTGGGGCTTGCGAATAT+TGG | + | chr4_4:13787028-13787047 | Msa0670920:CDS | 45.0% | |
| TGAAAATGTTGGAAGCTCGG+TGG | + | chr4_4:13787137-13787156 | Msa0670920:CDS | 45.0% | |
| TTCTCGTGACCAAGACAAAC+GGG | - | chr4_4:13787229-13787248 | None:intergenic | 45.0% | |
| CTACGTGCAGTCAATCAACT+AGG | + | chr4_4:13787264-13787283 | Msa0670920:CDS | 45.0% | |
| AGAAGCTACTCACTCAATGC+CGG | + | chr4_4:13787904-13787923 | Msa0670920:CDS | 45.0% | |
| GACATTGTGTCGCAGAATTC+AGG | - | chr4_4:13787949-13787968 | None:intergenic | 45.0% | |
| ATTGCGATGCACAACGACAT+TGG | + | chr4_4:13787975-13787994 | Msa0670920:CDS | 45.0% | |
| TTGCGATGCACAACGACATT+GGG | + | chr4_4:13787976-13787995 | Msa0670920:CDS | 45.0% | |
| CAACGACATTGGGTGGAAAT+TGG | + | chr4_4:13787986-13788005 | Msa0670920:CDS | 45.0% | |
| TGATGCTCATATGCCAGACA+TGG | + | chr4_4:13786793-13786812 | Msa0670920:CDS | 45.0% | |
| AATGTGGGGCTTGCGAATAT+TGG | + | chr4_4:13787028-13787047 | Msa0670920:CDS | 45.0% | |
| TGAAAATGTTGGAAGCTCGG+TGG | + | chr4_4:13787137-13787156 | Msa0670920:CDS | 45.0% | |
| TTCTCGTGACCAAGACAAAC+GGG | - | chr4_4:13787229-13787248 | None:intergenic | 45.0% | |
| CTACGTGCAGTCAATCAACT+AGG | + | chr4_4:13787264-13787283 | Msa0670920:CDS | 45.0% | |
| AGAAGCTACTCACTCAATGC+CGG | + | chr4_4:13787904-13787923 | Msa0670920:CDS | 45.0% | |
| GACATTGTGTCGCAGAATTC+AGG | - | chr4_4:13787949-13787968 | None:intergenic | 45.0% | |
| ATTGCGATGCACAACGACAT+TGG | + | chr4_4:13787975-13787994 | Msa0670920:CDS | 45.0% | |
| TTGCGATGCACAACGACATT+GGG | + | chr4_4:13787976-13787995 | Msa0670920:CDS | 45.0% | |
| CAACGACATTGGGTGGAAAT+TGG | + | chr4_4:13787986-13788005 | Msa0670920:CDS | 45.0% | |
| GATAACCCAACATTCCCAGC+CGG | + | chr4_4:13786513-13786532 | Msa0670920:CDS | 50.0% | |
| CAAAGAAGGCCCGTTTGTCT+TGG | + | chr4_4:13787217-13787236 | Msa0670920:CDS | 50.0% | |
| AGAAAACTCTGGTCCTGCTC+CGG | - | chr4_4:13787926-13787945 | None:intergenic | 50.0% | |
| GATAACCCAACATTCCCAGC+CGG | + | chr4_4:13786513-13786532 | Msa0670920:CDS | 50.0% | |
| CAAAGAAGGCCCGTTTGTCT+TGG | + | chr4_4:13787217-13787236 | Msa0670920:CDS | 50.0% | |
| AGAAAACTCTGGTCCTGCTC+CGG | - | chr4_4:13787926-13787945 | None:intergenic | 50.0% | |
| CAATAACCTCGAGACCGGCT+GGG | - | chr4_4:13786530-13786549 | None:intergenic | 55.0% | |
| TACTCACTCAATGCCGGAGC+AGG | + | chr4_4:13787910-13787929 | Msa0670920:CDS | 55.0% | |
| CGATGCACAACGACATTGGG+TGG | + | chr4_4:13787979-13787998 | Msa0670920:CDS | 55.0% | |
| CAATAACCTCGAGACCGGCT+GGG | - | chr4_4:13786530-13786549 | None:intergenic | 55.0% | |
| TACTCACTCAATGCCGGAGC+AGG | + | chr4_4:13787910-13787929 | Msa0670920:CDS | 55.0% | |
| CGATGCACAACGACATTGGG+TGG | + | chr4_4:13787979-13787998 | Msa0670920:CDS | 55.0% | |
| CGAGACCGGCTGGGAATGTT+GGG | - | chr4_4:13786521-13786540 | None:intergenic | 60.0% | |
| TCGAGACCGGCTGGGAATGT+TGG | - | chr4_4:13786522-13786541 | None:intergenic | 60.0% | |
| AACATTCCCAGCCGGTCTCG+AGG | + | chr4_4:13786521-13786540 | Msa0670920:CDS | 60.0% | |
| GCAATAACCTCGAGACCGGC+TGG | - | chr4_4:13786531-13786550 | None:intergenic | 60.0% | |
| CGAGACCGGCTGGGAATGTT+GGG | - | chr4_4:13786521-13786540 | None:intergenic | 60.0% | |
| TCGAGACCGGCTGGGAATGT+TGG | - | chr4_4:13786522-13786541 | None:intergenic | 60.0% | |
| AACATTCCCAGCCGGTCTCG+AGG | + | chr4_4:13786521-13786540 | Msa0670920:CDS | 60.0% | |
| GCAATAACCTCGAGACCGGC+TGG | - | chr4_4:13786531-13786550 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 13786498 | 13788096 | 13786498 | ID=Msa0670920;Name=Msa0670920 |
| chr4_4 | mRNA | 13786498 | 13788096 | 13786498 | ID=Msa0670920-mRNA-1;Parent=Msa0670920;Name=Msa0670920-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|5|0|313 |
| chr4_4 | exon | 13786498 | 13786615 | 13786498 | ID=Msa0670920-mRNA-1:exon:4169;Parent=Msa0670920-mRNA-1 |
| chr4_4 | exon | 13786720 | 13786869 | 13786720 | ID=Msa0670920-mRNA-1:exon:4170;Parent=Msa0670920-mRNA-1 |
| chr4_4 | exon | 13786983 | 13787294 | 13786983 | ID=Msa0670920-mRNA-1:exon:4171;Parent=Msa0670920-mRNA-1 |
| chr4_4 | exon | 13787385 | 13787461 | 13787385 | ID=Msa0670920-mRNA-1:exon:4172;Parent=Msa0670920-mRNA-1 |
| chr4_4 | exon | 13787812 | 13788096 | 13787812 | ID=Msa0670920-mRNA-1:exon:4173;Parent=Msa0670920-mRNA-1 |
| chr4_4 | CDS | 13786498 | 13786615 | 13786498 | ID=Msa0670920-mRNA-1:cds;Parent=Msa0670920-mRNA-1 |
| chr4_4 | CDS | 13786720 | 13786869 | 13786720 | ID=Msa0670920-mRNA-1:cds;Parent=Msa0670920-mRNA-1 |
| chr4_4 | CDS | 13786983 | 13787294 | 13786983 | ID=Msa0670920-mRNA-1:cds;Parent=Msa0670920-mRNA-1 |
| chr4_4 | CDS | 13787385 | 13787461 | 13787385 | ID=Msa0670920-mRNA-1:cds;Parent=Msa0670920-mRNA-1 |
| chr4_4 | CDS | 13787812 | 13788096 | 13787812 | ID=Msa0670920-mRNA-1:cds;Parent=Msa0670920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
