AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0672770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0672770 MtrunA17_Chr4g0013361 97.635 296 7 0 1 296 1 296 0.0 595
Msa0672770 MtrunA17_Chr8g0334881 41.692 331 131 8 1 292 1 308 2.21e-63 202
Msa0672770 MtrunA17_Chr1g0154031 54.386 114 50 2 10 122 76 188 9.87e-37 135
Msa0672770 MtrunA17_Chr3g0099131 54.206 107 48 1 10 116 41 146 1.48e-36 137
Msa0672770 MtrunA17_Chr8g0354661 45.638 149 74 4 2 145 25 171 1.19e-35 134
Msa0672770 MtrunA17_Chr5g0410961 50.833 120 50 3 10 121 12 130 1.89e-34 127
Msa0672770 MtrunA17_Chr1g0193801 47.518 141 68 4 10 147 12 149 6.96e-34 127
Msa0672770 MtrunA17_Chr7g0274581 51.852 108 51 1 6 113 8 114 7.27e-34 122
Msa0672770 MtrunA17_Chr3g0080861 49.533 107 53 1 10 116 37 142 7.82e-34 129
Msa0672770 MtrunA17_Chr5g0395281 53.846 104 47 1 10 113 12 114 2.67e-33 124
Msa0672770 MtrunA17_Chr7g0270891 55.140 107 47 1 10 116 12 117 9.54e-33 124
Msa0672770 MtrunA17_Chr2g0323411 47.541 122 60 3 6 124 8 128 9.70e-33 122
Msa0672770 MtrunA17_Chr1g0180391 53.211 109 49 2 8 115 17 124 1.64e-32 120
Msa0672770 MtrunA17_Chr3g0115821 50.962 104 50 1 10 113 12 114 2.14e-32 122
Msa0672770 MtrunA17_Chr6g0453471 50.000 104 51 1 10 113 12 114 3.07e-32 122
Msa0672770 MtrunA17_Chr8g0342541 50.877 114 55 1 10 123 12 124 3.39e-32 122
Msa0672770 MtrunA17_Chr2g0281071 50.000 108 52 2 10 116 13 119 4.43e-32 121
Msa0672770 MtrunA17_Chr4g0060721 49.074 108 54 1 6 113 9 115 5.20e-32 121
Msa0672770 MtrunA17_Chr4g0058631 43.151 146 78 3 10 151 12 156 6.64e-32 121
Msa0672770 MtrunA17_Chr4g0039971 50.000 104 51 1 10 113 13 115 8.48e-32 120
Msa0672770 MtrunA17_Chr7g0217221 49.038 104 52 1 10 113 12 114 9.65e-32 119
Msa0672770 MtrunA17_Chr4g0042671 43.066 137 76 2 6 141 8 143 1.02e-31 121
Msa0672770 MtrunA17_Chr4g0053431 56.863 102 42 2 12 113 5 104 1.05e-31 119
Msa0672770 MtrunA17_Chr7g0217741 50.000 108 53 1 6 113 8 114 1.23e-31 119
Msa0672770 MtrunA17_Chr2g0322521 55.455 110 48 1 7 116 26 134 1.28e-31 121
Msa0672770 MtrunA17_Chr8g0342521 43.796 137 76 1 10 146 12 147 1.31e-31 120
Msa0672770 MtrunA17_Chr7g0228231 36.095 169 93 4 10 170 14 175 1.78e-31 116
Msa0672770 MtrunA17_Chr7g0261281 46.903 113 58 2 6 117 8 119 1.86e-31 118
Msa0672770 MtrunA17_Chr7g0254411 41.791 134 77 1 6 139 8 140 2.13e-31 119
Msa0672770 MtrunA17_Chr2g0327821 33.188 229 141 4 10 233 6 227 2.40e-31 117
Msa0672770 MtrunA17_Chr2g0330041 50.000 114 56 1 10 123 12 124 2.52e-31 120
Msa0672770 MtrunA17_Chr3g0092401 47.321 112 57 2 6 116 9 119 2.84e-31 118
Msa0672770 MtrunA17_Chr1g0194301 47.664 107 55 1 10 116 33 138 2.86e-31 117
Msa0672770 MtrunA17_Chr5g0440761 33.077 260 157 10 11 265 13 260 2.97e-31 117
Msa0672770 MtrunA17_Chr1g0193371 44.231 156 80 4 10 161 12 164 3.20e-31 119
Msa0672770 MtrunA17_Chr2g0309911 51.923 104 49 1 10 113 11 113 3.75e-31 118
Msa0672770 MtrunA17_Chr5g0397231 51.000 100 48 1 10 109 12 110 4.20e-31 119
Msa0672770 MtrunA17_Chr8g0342481 50.862 116 53 3 10 123 12 125 4.22e-31 120
Msa0672770 MtrunA17_Chr1g0167661 43.077 130 72 2 6 134 8 136 5.81e-31 116
Msa0672770 MtrunA17_Chr4g0048511 49.074 108 53 2 10 116 13 119 6.96e-31 118
Msa0672770 MtrunA17_Chr6g0450101 46.154 104 55 1 10 113 14 116 1.17e-30 114
Msa0672770 MtrunA17_Chr1g0186061 43.443 122 64 2 11 132 21 137 1.76e-30 115
Msa0672770 MtrunA17_Chr5g0401731 50.000 126 59 3 12 135 15 138 2.22e-30 116
Msa0672770 MtrunA17_Chr6g0453211 49.000 100 50 1 10 109 12 110 2.38e-30 116
Msa0672770 MtrunA17_Chr1g0167691 46.296 108 57 1 6 113 8 114 2.83e-30 114
Msa0672770 MtrunA17_Chr5g0440781 40.237 169 94 6 11 178 13 175 3.12e-30 112
Msa0672770 MtrunA17_Chr1g0194291 45.370 108 57 2 3 110 15 120 3.65e-30 114
Msa0672770 MtrunA17_Chr8g0387421 46.789 109 57 1 10 118 12 119 5.21e-30 115
Msa0672770 MtrunA17_Chr2g0328771 46.957 115 60 1 10 124 20 133 5.22e-30 115
Msa0672770 MtrunA17_Chr1g0203411 45.946 111 59 1 6 116 8 117 5.40e-30 115
Msa0672770 MtrunA17_Chr5g0441141 40.237 169 94 6 11 178 13 175 5.83e-30 114
Msa0672770 MtrunA17_Chr2g0311221 48.571 105 53 1 6 110 10 113 6.20e-30 115
Msa0672770 MtrunA17_Chr1g0211161 50.962 104 50 1 10 113 13 115 7.79e-30 112
Msa0672770 MtrunA17_Chr3g0117091 51.923 104 49 1 10 113 12 114 1.10e-29 115
Msa0672770 MtrunA17_Chr1g0203441 52.427 103 48 1 11 113 14 115 1.93e-29 112
Msa0672770 MtrunA17_Chr4g0022931 48.624 109 54 2 10 117 13 120 2.01e-29 112
Msa0672770 MtrunA17_Chr5g0441131 50.000 108 52 2 10 116 9 115 2.02e-29 110
Msa0672770 MtrunA17_Chr8g0385321 45.528 123 64 2 6 128 8 127 2.10e-29 114
Msa0672770 MtrunA17_Chr5g0435101 44.355 124 65 2 10 133 11 130 3.83e-29 110
Msa0672770 MtrunA17_Chr1g0209661 41.441 111 64 1 6 116 23 132 4.06e-29 113
Msa0672770 MtrunA17_Chr8g0349261 52.381 105 48 2 10 113 13 116 4.12e-29 112
Msa0672770 MtrunA17_Chr1g0187761 47.222 108 56 1 6 113 8 114 4.22e-29 111
Msa0672770 MtrunA17_Chr1g0168661 46.729 107 56 1 11 117 22 127 5.48e-29 111
Msa0672770 MtrunA17_Chr4g0022881 44.643 112 61 1 5 116 7 117 6.92e-29 110
Msa0672770 MtrunA17_Chr7g0271241 53.535 99 45 1 10 108 12 109 7.74e-29 113
Msa0672770 MtrunA17_Chr4g0032401 45.833 120 64 1 10 129 17 135 9.61e-29 112
Msa0672770 MtrunA17_Chr4g0022891 45.455 121 63 2 5 123 7 126 1.00e-28 110
Msa0672770 MtrunA17_Chr4g0037141 42.188 128 71 2 6 131 8 134 1.15e-28 111
Msa0672770 MtrunA17_Chr3g0103281 48.148 108 55 1 6 113 8 114 1.38e-28 112
Msa0672770 MtrunA17_Chr5g0417821 45.833 120 61 3 10 126 7 125 1.40e-28 110
Msa0672770 MtrunA17_Chr7g0264641 47.706 109 55 2 6 113 8 115 1.48e-28 110
Msa0672770 MtrunA17_Chr4g0028311 37.629 194 91 7 10 193 12 185 1.65e-28 111
Msa0672770 MtrunA17_Chr2g0327351 49.524 105 51 2 6 109 8 111 1.85e-28 111
Msa0672770 MtrunA17_Chr4g0044421 50.000 104 50 2 12 114 14 116 2.66e-28 107
Msa0672770 MtrunA17_Chr8g0346561 46.789 109 56 2 10 117 12 119 3.15e-28 110
Msa0672770 MtrunA17_Chr3g0099141 52.326 86 40 1 10 95 40 124 4.57e-28 105
Msa0672770 MtrunA17_Chr4g0022901 43.846 130 67 3 10 138 13 137 5.97e-28 108
Msa0672770 MtrunA17_Chr2g0323351 38.667 150 90 2 10 158 12 160 6.10e-28 108
Msa0672770 MtrunA17_Chr4g0008551 50.000 102 49 2 12 113 38 137 9.48e-28 110
Msa0672770 MtrunA17_Chr5g0434571 44.186 129 65 2 10 138 48 169 1.31e-27 109
Msa0672770 MtrunA17_Chr3g0131121 34.031 191 114 4 6 189 8 193 1.33e-27 108
Msa0672770 MtrunA17_Chr3g0088461 50.000 104 51 1 10 113 22 124 1.43e-27 109
Msa0672770 MtrunA17_Chr1g0192411 47.748 111 56 2 10 119 12 121 1.47e-27 110
Msa0672770 MtrunA17_Chr3g0110351 49.038 104 52 1 10 113 12 114 1.72e-27 108
Msa0672770 MtrunA17_Chr1g0151941 41.667 132 64 3 10 129 12 142 2.71e-27 106
Msa0672770 MtrunA17_Chr4g0030881 47.107 121 54 4 11 122 8 127 3.01e-27 106
Msa0672770 MtrunA17_Chr6g0470971 46.087 115 61 1 1 115 5 118 3.94e-27 107
Msa0672770 MtrunA17_Chr1g0152011 47.706 109 55 2 6 113 8 115 4.13e-27 108
Msa0672770 MtrunA17_Chr6g0452271 43.511 131 70 3 10 137 12 141 5.19e-27 107
Msa0672770 MtrunA17_Chr3g0133601 50.980 102 48 2 12 113 37 136 7.79e-27 104
Msa0672770 MtrunA17_Chr6g0454921 55.208 96 41 2 12 107 15 108 1.33e-26 103
Msa0672770 MtrunA17_Chr4g0022911 46.154 104 55 1 10 113 13 115 1.37e-26 105
Msa0672770 MtrunA17_Chr4g0068061 43.269 104 58 1 10 113 12 114 2.22e-26 106
Msa0672770 MtrunA17_Chr4g0055981 40.000 120 71 1 10 129 55 173 2.55e-26 103
Msa0672770 MtrunA17_Chr1g0194951 46.154 104 55 1 10 113 12 114 2.66e-26 106
Msa0672770 MtrunA17_Chr4g0057031 47.115 104 54 1 10 113 12 114 3.02e-26 104
Msa0672770 MtrunA17_Chr5g0400821 46.789 109 56 2 6 113 8 115 3.39e-26 105
Msa0672770 MtrunA17_Chr7g0275911 41.667 108 62 1 10 117 12 118 8.83e-26 102
Msa0672770 MtrunA17_Chr3g0135311 44.954 109 58 2 6 113 8 115 1.11e-25 104
Msa0672770 MtrunA17_Chr3g0121241 42.373 118 64 2 10 124 42 158 1.36e-25 103
Msa0672770 MtrunA17_Chr4g0054391 47.115 104 53 2 6 108 8 110 1.40e-25 103
Msa0672770 MtrunA17_Chr7g0228891 45.192 104 56 1 10 113 12 114 2.45e-25 102
Msa0672770 MtrunA17_Chr4g0068921 42.991 107 60 1 10 116 24 129 9.12e-25 98.6
Msa0672770 MtrunA17_Chr6g0487491 42.735 117 57 3 6 113 8 123 1.41e-24 99.8
Msa0672770 MtrunA17_Chr8g0343831 45.000 100 54 1 10 109 8 106 2.28e-24 99.0
Msa0672770 MtrunA17_Chr4g0070611 36.220 127 76 2 10 132 12 137 2.36e-24 100
Msa0672770 MtrunA17_Chr4g0072751 45.714 105 55 2 6 109 8 111 3.11e-24 100
Msa0672770 MtrunA17_Chr1g0157731 45.872 109 57 2 10 118 89 195 3.33e-24 102
Msa0672770 MtrunA17_Chr4g0070641 42.000 100 57 1 10 109 12 110 3.93e-24 96.3
Msa0672770 MtrunA17_Chr2g0293911 42.991 107 60 1 10 116 24 129 6.06e-24 99.4
Msa0672770 MtrunA17_Chr3g0139671 44.954 109 58 2 10 118 83 189 7.49e-24 101
Msa0672770 MtrunA17_Chr8g0360111 45.098 102 55 1 8 109 23 123 1.27e-23 97.1
Msa0672770 MtrunA17_Chr5g0429661 45.098 102 54 2 12 113 122 221 1.75e-23 98.6
Msa0672770 MtrunA17_Chr7g0269831 48.148 108 55 1 6 113 8 114 2.98e-23 97.8
Msa0672770 MtrunA17_Chr4g0058991 44.444 108 58 2 6 113 203 308 3.35e-23 99.0
Msa0672770 MtrunA17_Chr7g0238631 48.077 104 52 2 10 113 111 212 6.14e-23 98.6
Msa0672770 MtrunA17_Chr5g0437321 48.077 104 52 2 6 109 13 114 9.58e-23 95.5
Msa0672770 MtrunA17_Chr7g0240821 35.333 150 77 2 14 144 5 153 1.53e-22 93.6
Msa0672770 MtrunA17_Chr4g0042611 48.780 82 41 1 6 87 8 88 1.77e-22 89.4
Msa0672770 MtrunA17_Chr7g0247131 40.000 130 71 4 42 166 11 138 2.71e-22 93.6
Msa0672770 MtrunA17_Chr5g0434931 42.609 115 63 3 1 114 27 139 3.42e-22 93.6
Msa0672770 MtrunA17_Chr7g0228531 33.149 181 98 6 10 190 218 375 3.50e-22 95.9
Msa0672770 MtrunA17_Chr3g0117511 44.118 102 55 2 12 113 183 282 1.54e-21 94.0
Msa0672770 MtrunA17_Chr7g0220341 44.660 103 54 2 10 110 25 126 2.07e-21 91.3
Msa0672770 MtrunA17_Chr5g0434911 42.609 115 63 3 1 114 13 125 2.16e-21 91.3
Msa0672770 MtrunA17_Chr7g0228991 42.574 101 57 1 10 110 29 128 3.36e-21 90.9
Msa0672770 MtrunA17_Chr6g0480581 44.762 105 56 2 12 116 4 106 3.45e-21 90.1
Msa0672770 MtrunA17_Chr5g0395221 53.846 78 35 1 10 87 12 88 3.94e-21 85.5
Msa0672770 MtrunA17_Chr7g0228481 29.167 192 109 6 1 190 209 375 1.26e-20 91.3
Msa0672770 MtrunA17_Chr5g0434831 43.396 106 58 2 4 109 2 105 1.69e-20 87.0
Msa0672770 MtrunA17_Chr5g0417621 41.085 129 60 4 12 126 134 260 8.27e-20 89.0
Msa0672770 MtrunA17_Chr5g0434841 40.678 118 66 3 1 116 12 127 1.02e-19 87.4
Msa0672770 MtrunA17_Chr4g0042501 43.590 117 61 3 3 116 93 207 2.07e-19 87.8
Msa0672770 MtrunA17_Chr8g0342511 50.649 77 37 1 10 86 12 87 2.80e-19 80.9
Msa0672770 MtrunA17_Chr8g0342531 49.367 79 39 1 10 88 12 89 3.55e-19 82.8
Msa0672770 MtrunA17_Chr8g0342461 50.000 80 38 2 10 88 12 90 8.79e-19 80.9
Msa0672770 MtrunA17_Chr7g0228401 32.222 180 110 6 23 201 290 458 2.50e-18 84.7
Msa0672770 MtrunA17_Chr8g0342471 48.750 80 39 2 10 88 12 90 2.84e-18 79.7
Msa0672770 MtrunA17_Chr7g0238651 41.346 104 58 2 15 116 10 112 2.92e-18 84.0
Msa0672770 MtrunA17_Chr5g0425591 48.193 83 41 2 11 92 10 91 6.92e-18 77.0
Msa0672770 MtrunA17_Chr5g0397841 43.878 98 53 2 10 107 108 203 7.66e-18 83.6
Msa0672770 MtrunA17_Chr6g0460671 40.000 105 61 2 12 116 99 201 8.57e-18 82.4
Msa0672770 MtrunA17_Chr2g0323321 41.860 86 49 1 10 95 11 95 1.02e-17 77.4
Msa0672770 MtrunA17_Chr6g0460661 39.048 105 62 2 12 116 16 118 1.19e-17 78.6
Msa0672770 MtrunA17_Chr6g0453751 46.739 92 39 3 10 92 20 110 1.66e-17 77.4
Msa0672770 MtrunA17_Chr3g0125801 45.714 105 55 2 12 116 16 118 2.17e-17 80.5
Msa0672770 MtrunA17_Chr7g0254261 44.643 112 57 3 8 116 82 191 3.36e-17 80.9
Msa0672770 MtrunA17_Chr7g0233061 32.667 150 85 5 12 157 180 317 2.19e-16 78.6
Msa0672770 MtrunA17_Chr8g0362231 37.864 103 62 2 15 117 25 125 3.23e-16 78.6
Msa0672770 MtrunA17_Chr1g0177901 34.483 145 87 5 22 163 4 143 1.03e-15 74.3
Msa0672770 MtrunA17_Chr5g0416341 39.394 99 58 2 15 113 29 125 3.60e-15 75.5
Msa0672770 MtrunA17_Chr2g0294811 40.244 82 48 1 6 87 8 88 1.21e-14 69.3
Msa0672770 MtrunA17_Chr5g0434901 46.667 75 35 2 35 109 2 71 1.23e-13 66.2
Msa0672770 MtrunA17_Chr3g0093811 45.714 70 37 1 44 113 16 84 1.59e-13 69.3
Msa0672770 MtrunA17_Chr7g0229131 44.286 70 38 1 44 113 6 74 2.77e-13 66.6
Msa0672770 MtrunA17_Chr7g0229101 46.377 69 36 1 44 112 6 73 1.20e-12 65.9
Msa0672770 MtrunA17_Chr3g0104501 50.000 66 32 1 12 77 133 197 2.94e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0672770 AT3G60460.1 41.613 310 138 7 4 292 5 292 5.07e-62 199
Msa0672770 AT4G26930.1 51.613 124 57 3 10 132 19 140 5.97e-37 135
Msa0672770 AT5G06100.1 54.206 107 48 1 10 116 32 137 6.27e-37 137
Msa0672770 AT5G06100.5 54.206 107 48 1 10 116 32 137 2.18e-36 136
Msa0672770 AT5G06100.2 54.206 107 48 1 10 116 32 137 2.18e-36 136
Msa0672770 AT5G06100.3 54.206 107 48 1 10 116 32 137 2.18e-36 136
Msa0672770 AT5G06100.4 54.206 107 48 1 10 116 32 137 2.18e-36 136
Msa0672770 AT3G11440.2 51.351 111 53 1 6 116 37 146 3.34e-36 135
Msa0672770 AT3G11440.3 51.351 111 53 1 6 116 37 146 1.58e-35 134
Msa0672770 AT3G11440.4 51.351 111 53 1 6 116 37 146 1.58e-35 134
Msa0672770 AT3G11440.1 51.351 111 53 1 6 116 37 146 1.58e-35 134
Msa0672770 AT5G55020.1 52.336 107 50 1 10 116 26 131 1.21e-34 132
Msa0672770 AT2G32460.2 50.467 107 52 1 10 116 6 111 4.93e-34 129
Msa0672770 AT2G32460.1 50.467 107 52 1 10 116 18 123 5.06e-34 129
Msa0672770 AT2G26960.1 53.333 105 48 1 12 116 22 125 1.59e-33 127
Msa0672770 AT1G34670.1 50.962 104 50 1 10 113 12 114 1.73e-32 123
Msa0672770 AT3G13890.2 54.808 104 46 1 10 113 12 114 1.93e-32 123
Msa0672770 AT4G21440.1 49.180 122 58 3 6 124 8 128 2.99e-32 122
Msa0672770 AT4G28110.1 47.541 122 60 3 6 124 8 128 3.08e-32 120
Msa0672770 AT4G01680.3 53.271 107 49 1 10 116 12 117 4.79e-32 119
Msa0672770 AT3G27810.1 36.905 168 100 3 10 174 20 184 4.94e-32 119
Msa0672770 AT5G65230.1 50.962 104 50 1 10 113 12 114 6.91e-32 120
Msa0672770 AT5G15310.4 50.000 104 51 1 10 113 12 114 1.21e-31 118
Msa0672770 AT4G01680.1 53.271 107 49 1 10 116 12 117 1.33e-31 120
Msa0672770 AT5G26660.1 53.271 107 49 1 10 116 12 117 1.38e-31 120
Msa0672770 AT3G01530.1 42.063 126 69 2 6 131 21 142 1.71e-31 117
Msa0672770 AT3G12720.1 47.967 123 63 1 10 132 22 143 3.40e-31 119
Msa0672770 AT5G54230.1 50.000 104 51 1 10 113 12 114 3.72e-31 119
Msa0672770 AT5G15310.1 50.000 104 51 1 10 113 12 114 3.91e-31 119
Msa0672770 AT1G57560.1 46.212 132 67 3 10 138 12 142 4.25e-31 118
Msa0672770 AT1G63910.1 50.467 107 52 1 10 116 12 117 4.31e-31 119
Msa0672770 AT5G15310.2 50.000 104 51 1 10 113 12 114 4.37e-31 118
Msa0672770 AT1G08810.1 50.962 104 50 1 10 113 12 114 5.13e-31 117
Msa0672770 AT1G74650.1 48.148 108 55 1 6 113 8 114 5.19e-31 119
Msa0672770 AT3G28910.1 46.296 108 57 1 6 113 8 114 5.43e-31 118
Msa0672770 AT3G61250.1 41.892 148 71 3 10 143 12 158 5.88e-31 118
Msa0672770 AT3G30210.1 43.066 137 70 2 11 147 28 156 7.37e-31 117
Msa0672770 AT1G57560.2 44.776 134 70 3 10 140 12 144 7.52e-31 117
Msa0672770 AT3G02940.2 49.057 106 52 2 10 114 12 116 8.74e-31 117
Msa0672770 AT5G59780.3 48.696 115 56 2 11 123 9 122 9.24e-31 115
Msa0672770 AT4G05100.1 50.000 106 51 2 10 114 13 117 1.10e-30 117
Msa0672770 AT3G01140.2 47.222 108 56 1 6 113 8 114 1.16e-30 118
Msa0672770 AT3G47600.1 48.077 104 53 1 10 113 12 114 1.23e-30 117
Msa0672770 AT3G46130.1 49.565 115 55 2 11 123 10 123 1.23e-30 116
Msa0672770 AT3G50060.1 57.843 102 41 2 12 113 6 105 1.25e-30 117
Msa0672770 AT3G02940.1 49.057 106 52 2 10 114 12 116 1.30e-30 117
Msa0672770 AT3G02940.3 49.057 106 52 2 10 114 12 116 1.30e-30 117
Msa0672770 AT5G62470.2 47.222 108 56 1 6 113 8 114 1.48e-30 118
Msa0672770 AT1G79180.1 47.458 118 60 2 10 126 14 130 1.50e-30 116
Msa0672770 AT3G01140.1 47.222 108 56 1 6 113 51 157 1.95e-30 118
Msa0672770 AT1G09540.1 52.885 104 48 1 10 113 12 114 2.25e-30 117
Msa0672770 AT1G16490.1 50.962 104 50 1 10 113 14 116 2.32e-30 115
Msa0672770 AT5G16770.4 49.057 106 52 2 10 114 12 116 3.56e-30 116
Msa0672770 AT5G16770.3 49.057 106 52 2 10 114 12 116 3.56e-30 116
Msa0672770 AT2G47190.1 45.370 108 58 1 10 117 20 126 3.99e-30 115
Msa0672770 AT5G16770.1 49.057 106 52 2 10 114 12 116 4.71e-30 116
Msa0672770 AT5G16770.2 49.057 106 52 2 10 114 12 116 4.71e-30 116
Msa0672770 AT5G40350.1 45.192 104 56 1 10 113 17 119 5.09e-30 113
Msa0672770 AT3G13890.1 50.442 113 46 2 10 113 12 123 5.74e-30 116
Msa0672770 AT4G09460.1 42.754 138 74 4 6 142 8 141 8.96e-30 113
Msa0672770 AT1G48000.1 47.525 101 52 1 10 110 32 131 1.51e-29 112
Msa0672770 AT1G18570.1 44.928 138 68 4 10 147 13 142 1.56e-29 115
Msa0672770 AT2G31180.1 44.248 113 61 2 6 117 8 119 2.00e-29 112
Msa0672770 AT3G23250.1 41.353 133 76 2 6 137 8 139 2.38e-29 113
Msa0672770 AT5G10280.1 49.038 104 52 1 10 113 12 114 2.57e-29 114
Msa0672770 AT3G55730.1 56.863 102 42 2 12 113 56 155 2.89e-29 115
Msa0672770 AT5G62470.1 47.222 108 55 2 6 113 8 113 3.02e-29 114
Msa0672770 AT1G56160.1 46.296 108 57 1 6 113 10 116 3.12e-29 113
Msa0672770 AT5G61420.2 35.533 197 101 6 10 201 12 187 3.42e-29 114
Msa0672770 AT5G67300.1 56.863 102 42 2 12 113 6 105 3.60e-29 113
Msa0672770 AT1G35515.1 48.624 109 53 3 6 113 8 114 3.61e-29 110
Msa0672770 AT4G34990.1 48.148 108 55 1 6 113 8 114 3.64e-29 112
Msa0672770 AT3G24310.1 43.411 129 65 3 6 134 15 135 3.71e-29 112
Msa0672770 AT3G48920.1 52.427 103 48 1 11 113 19 120 3.77e-29 112
Msa0672770 AT4G38620.1 36.667 180 99 5 6 175 8 182 4.77e-29 112
Msa0672770 AT1G22640.1 47.222 108 56 1 6 113 8 114 8.83e-29 111
Msa0672770 AT5G07690.1 46.667 105 55 1 10 114 12 115 9.51e-29 112
Msa0672770 AT5G60890.1 50.000 104 51 1 10 113 12 114 1.12e-28 111
Msa0672770 AT3G53200.1 48.673 113 55 2 10 120 9 120 1.16e-28 110
Msa0672770 AT4G37780.1 49.524 105 51 2 10 113 12 115 1.88e-28 111
Msa0672770 AT5G57620.1 48.624 109 54 2 6 113 8 115 1.93e-28 112
Msa0672770 AT4G01680.2 48.739 119 48 3 10 116 12 129 2.14e-28 112
Msa0672770 AT5G23000.1 50.467 107 50 3 10 114 12 117 2.26e-28 111
Msa0672770 AT4G13480.1 47.573 103 53 1 11 113 7 108 2.44e-28 110
Msa0672770 AT2G16720.1 48.624 109 53 3 6 113 8 114 3.82e-28 109
Msa0672770 AT2G47460.1 44.915 118 64 1 6 123 8 124 4.13e-28 111
Msa0672770 AT5G07700.1 48.077 104 53 1 10 113 12 114 4.63e-28 111
Msa0672770 AT5G07700.2 48.077 104 53 1 10 113 12 114 4.63e-28 111
Msa0672770 AT4G37260.1 53.922 102 45 2 12 113 13 112 4.83e-28 110
Msa0672770 AT4G17785.2 48.077 104 53 1 10 113 13 115 5.25e-28 111
Msa0672770 AT4G17785.1 48.077 104 53 1 10 113 13 115 5.73e-28 111
Msa0672770 AT1G18710.1 44.262 122 64 3 10 128 12 132 9.33e-28 108
Msa0672770 AT1G06180.1 45.370 108 58 1 6 113 8 114 9.59e-28 108
Msa0672770 AT3G12820.1 48.148 108 55 1 6 113 10 116 9.69e-28 107
Msa0672770 AT1G66230.1 45.968 124 63 2 10 130 12 134 1.31e-27 108
Msa0672770 AT2G23290.1 53.922 102 45 2 12 113 13 112 1.45e-27 109
Msa0672770 AT5G49330.1 46.296 108 57 1 6 113 8 114 1.69e-27 109
Msa0672770 AT1G68320.1 42.056 107 61 1 10 116 19 124 2.82e-27 107
Msa0672770 AT5G56110.1 46.296 108 57 1 6 113 8 114 2.89e-27 108
Msa0672770 AT1G25340.1 43.396 106 59 1 11 116 19 123 3.78e-27 107
Msa0672770 AT5G16600.1 44.776 134 67 3 10 137 12 144 4.24e-27 108
Msa0672770 AT5G14340.1 42.982 114 64 1 10 123 24 136 6.33e-27 106
Msa0672770 AT2G36890.1 44.037 109 59 2 6 113 8 115 7.06e-27 107
Msa0672770 AT3G08500.1 50.000 104 51 1 10 113 30 132 7.07e-27 107
Msa0672770 AT5G12870.1 48.148 108 54 2 10 116 18 124 8.95e-27 106
Msa0672770 AT3G13540.1 42.063 126 69 3 10 132 23 147 9.21e-27 105
Msa0672770 AT4G22680.1 49.038 104 52 1 10 113 12 114 1.04e-26 105
Msa0672770 AT4G25560.1 48.544 103 52 1 11 113 11 112 1.22e-26 106
Msa0672770 AT2G36890.2 44.037 109 59 2 6 113 49 156 1.30e-26 107
Msa0672770 AT5G52600.1 45.370 108 58 1 2 109 4 110 1.51e-26 103
Msa0672770 AT4G18770.1 40.940 149 84 4 3 149 208 354 1.51e-26 108
Msa0672770 AT3G49690.1 46.552 116 60 2 6 120 8 122 1.99e-26 106
Msa0672770 AT3G28470.1 49.038 104 52 1 6 109 8 110 2.17e-26 106
Msa0672770 AT1G74430.1 43.333 120 64 3 10 126 12 130 3.12e-26 104
Msa0672770 AT5G14750.1 48.000 100 51 1 11 110 17 115 3.58e-26 102
Msa0672770 AT5G35550.1 37.419 155 90 4 7 159 11 160 3.90e-26 104
Msa0672770 AT4G12350.1 45.902 122 60 3 10 127 12 131 5.28e-26 104
Msa0672770 AT3G62610.1 43.220 118 66 1 6 123 8 124 5.30e-26 105
Msa0672770 AT2G26950.1 45.192 104 56 1 12 115 18 120 5.33e-26 106
Msa0672770 AT5G40330.1 44.545 110 60 1 1 110 3 111 8.25e-26 102
Msa0672770 AT5G65790.1 45.690 116 61 2 6 120 8 122 1.29e-25 105
Msa0672770 AT1G79180.2 37.179 156 61 4 6 126 10 163 1.35e-25 104
Msa0672770 AT1G74080.1 46.154 104 55 1 10 113 12 114 1.41e-25 104
Msa0672770 AT2G39880.1 51.961 102 47 2 12 113 50 149 1.50e-25 104
Msa0672770 AT3G27920.1 42.400 125 62 3 11 126 15 138 6.30e-25 100
Msa0672770 AT5G11050.1 43.697 119 63 3 10 126 103 219 8.61e-25 103
Msa0672770 AT1G25340.2 42.453 106 55 2 11 116 19 118 1.41e-24 100
Msa0672770 AT5G52260.1 47.009 117 60 2 11 126 13 128 1.57e-24 100
Msa0672770 AT3G09230.1 50.000 102 49 2 12 113 55 154 2.62e-24 101
Msa0672770 AT1G25340.3 42.453 106 55 2 11 116 19 118 2.93e-24 100
Msa0672770 AT5G62320.1 45.946 111 52 2 10 113 13 122 4.63e-24 98.2
Msa0672770 AT3G06490.1 45.794 107 57 1 10 116 19 124 1.20e-23 99.0
Msa0672770 AT5G49620.1 46.154 104 55 1 10 113 26 128 1.23e-23 98.6
Msa0672770 AT5G58850.1 45.946 111 56 3 12 120 105 213 2.11e-23 99.8
Msa0672770 AT5G02320.3 44.628 121 62 3 10 127 65 183 3.92e-23 99.4
Msa0672770 AT5G02320.1 44.628 121 62 3 10 127 125 243 4.17e-23 99.4
Msa0672770 AT5G02320.2 44.628 121 62 3 10 127 125 243 4.17e-23 99.4
Msa0672770 AT5G40360.1 42.727 110 61 2 6 115 152 259 8.41e-23 97.1
Msa0672770 AT4G32730.5 44.545 110 58 3 10 118 85 192 2.27e-22 97.8
Msa0672770 AT4G32730.4 44.545 110 58 3 10 118 85 192 2.27e-22 97.8
Msa0672770 AT4G32730.3 44.545 110 58 3 10 118 85 192 2.27e-22 97.8
Msa0672770 AT4G32730.2 44.545 110 58 3 10 118 85 192 2.27e-22 97.8
Msa0672770 AT4G32730.1 44.545 110 58 3 10 118 85 192 2.44e-22 97.4
Msa0672770 AT3G27810.2 38.060 134 77 3 44 174 5 135 2.68e-22 91.7
Msa0672770 AT3G46130.3 52.874 87 38 2 39 123 6 91 3.64e-22 92.8
Msa0672770 AT1G66370.1 35.859 198 99 7 10 182 8 202 4.04e-22 93.2
Msa0672770 AT5G59780.2 54.878 82 34 2 44 123 21 101 4.22e-22 92.4
Msa0672770 AT3G09370.2 45.794 107 56 2 12 118 135 239 4.90e-22 96.3
Msa0672770 AT5G26660.2 58.904 73 29 1 44 116 15 86 4.93e-22 94.4
Msa0672770 AT3G09370.1 45.794 107 56 2 12 118 130 234 5.72e-22 95.9
Msa0672770 AT3G09370.3 45.794 107 56 2 12 118 143 247 6.69e-22 95.9
Msa0672770 AT5G11510.3 41.284 109 62 2 10 118 79 185 7.23e-22 96.3
Msa0672770 AT5G11510.1 41.284 109 62 2 10 118 79 185 7.23e-22 96.3
Msa0672770 AT5G11510.4 41.284 109 62 2 10 118 79 185 7.23e-22 96.3
Msa0672770 AT3G46130.4 54.878 82 34 2 44 123 21 101 7.23e-22 92.0
Msa0672770 AT5G11510.2 41.284 109 62 2 10 118 79 185 8.61e-22 95.9
Msa0672770 AT5G11510.5 41.284 109 62 2 10 118 79 185 8.83e-22 95.9
Msa0672770 AT3G27785.1 41.667 108 61 2 6 113 183 288 1.51e-21 94.4
Msa0672770 AT1G66380.1 45.000 100 54 1 10 109 8 106 2.03e-21 88.6
Msa0672770 AT3G29020.1 44.762 105 56 2 12 116 65 167 2.28e-21 90.9
Msa0672770 AT3G29020.2 44.762 105 56 2 12 116 67 169 3.28e-21 91.7
Msa0672770 AT1G56650.1 44.554 101 55 1 10 110 8 107 6.08e-21 90.1
Msa0672770 AT5G40350.2 51.429 70 33 1 44 113 6 74 3.41e-20 85.9
Msa0672770 AT5G49620.2 40.678 118 55 2 10 113 26 142 3.73e-20 89.0
Msa0672770 AT3G53200.2 53.165 79 34 2 44 120 10 87 9.57e-20 85.9
Msa0672770 AT1G69560.1 44.554 101 54 2 7 107 102 200 1.06e-19 87.8
Msa0672770 AT1G69560.2 44.554 101 54 2 7 107 118 216 1.20e-19 88.2
Msa0672770 AT1G26780.2 39.683 126 61 3 10 122 96 219 1.95e-19 87.8
Msa0672770 AT1G26780.1 39.683 126 61 3 10 122 96 219 2.02e-19 86.3
Msa0672770 AT4G33450.1 41.935 124 65 4 11 131 18 137 2.06e-19 85.9
Msa0672770 AT1G66390.1 42.574 101 57 1 10 110 8 107 2.63e-19 85.5
Msa0672770 AT5G17800.1 42.241 116 62 3 12 124 93 206 3.18e-19 86.7
Msa0672770 AT3G12820.2 55.882 68 29 1 46 113 2 68 3.43e-19 84.0
Msa0672770 AT2G25230.1 38.793 116 67 4 10 124 24 136 5.17e-19 84.3
Msa0672770 AT3G47600.2 52.857 70 32 1 44 113 40 108 6.52e-19 85.9
Msa0672770 AT1G17950.1 43.810 105 54 3 12 113 5 107 6.73e-19 84.3
Msa0672770 AT5G35550.2 41.525 118 62 4 44 159 51 163 2.08e-18 83.2
Msa0672770 AT4G00540.2 45.045 111 55 4 10 116 101 209 9.04e-18 83.2
Msa0672770 AT4G00540.1 45.045 111 55 4 10 116 99 207 1.49e-17 82.8
Msa0672770 AT2G37630.1 41.346 104 58 2 15 116 7 109 3.55e-17 81.3
Msa0672770 AT5G39700.1 38.793 116 69 2 1 116 45 158 5.91e-17 77.8
Msa0672770 AT1G73410.1 44.762 105 53 3 12 113 6 108 6.66e-17 79.0
Msa0672770 AT1G73410.2 44.762 105 53 3 12 113 6 108 7.35e-17 77.8
Msa0672770 AT5G14750.3 52.308 65 30 1 46 110 18 81 3.15e-16 75.1
Msa0672770 AT5G40430.1 37.500 112 67 3 10 121 52 160 7.06e-16 76.3
Msa0672770 AT2G02820.3 32.877 146 76 4 15 160 33 156 1.31e-14 73.6
Msa0672770 AT2G02820.2 32.877 146 76 4 15 160 33 156 1.31e-14 74.3
Msa0672770 AT2G02820.1 32.877 146 76 4 15 160 33 156 1.71e-14 73.9
Msa0672770 AT1G14350.2 36.449 107 66 2 15 121 28 132 3.70e-14 72.8
Msa0672770 AT1G14350.1 36.449 107 66 2 15 121 28 132 3.70e-14 72.8
Msa0672770 AT1G66380.3 51.515 66 31 1 44 109 9 73 8.74e-13 63.9
Msa0672770 AT1G66380.2 36.735 98 60 2 10 106 8 104 1.93e-12 63.2
Msa0672770 AT3G23250.2 40.964 83 47 2 56 137 1 82 3.27e-12 65.5
Msa0672770 AT1G22640.3 50.000 58 28 1 56 113 1 57 2.22e-11 62.4
Msa0672770 AT3G18100.1 38.144 97 58 2 11 107 545 639 5.28e-11 63.5
Msa0672770 AT3G18100.4 38.144 97 58 2 11 107 384 478 5.36e-11 63.5
Msa0672770 AT3G18100.3 38.144 97 58 2 11 107 497 591 5.44e-11 63.5
Msa0672770 AT3G18100.2 38.144 97 58 2 11 107 332 426 5.49e-11 63.5
Msa0672770 AT5G59780.1 48.148 54 26 1 72 123 4 57 6.65e-11 60.5

Find 70 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCAAATATGTAGCAATTT+TGG 0.139113 4_4:+18142800 None:intergenic
CTCAAACATGTCCATAAAAT+TGG 0.140060 4_4:+18141935 None:intergenic
GGCCAAAATTGCTACATATT+TGG 0.140847 4_4:-18142802 Msa0672770:CDS
TACTTACCCAACTTCTTATA+TGG 0.155167 4_4:-18142186 Msa0672770:CDS
ATTGAACTACAGGGCCAATT+TGG 0.210428 4_4:-18142834 Msa0672770:CDS
TTTGGAGTAGCAGGAGAAAA+AGG 0.243245 4_4:-18142749 Msa0672770:CDS
TTAGTTCACTTTCCAAATTT+TGG 0.243837 4_4:+18142108 None:intergenic
TTGTGTTTCTGCTGCTTTGA+TGG 0.256433 4_4:+18142693 None:intergenic
AAAGCCAAACTACCAAAATT+TGG 0.257129 4_4:-18142120 Msa0672770:CDS
TGGCCCATTTGTTCCCAAAT+TGG 0.264545 4_4:+18142820 None:intergenic
AAGTTCAAACTGCTTCTTTC+AGG 0.270783 4_4:-18141826 Msa0672770:CDS
GGAAAGTCCATCTGTGATTC+AGG 0.284117 4_4:+18142002 None:intergenic
TTGAAACATGTTAACAAATA+TGG 0.313597 4_4:-18143774 Msa0672770:CDS
TAGTTTGGCTTTGTTAAATC+TGG 0.332623 4_4:+18142131 None:intergenic
AGCTGATTTGAACCACATTC+AGG 0.362249 4_4:+18142221 None:intergenic
TCAAACATGTCCATAAAATT+GGG 0.364368 4_4:+18141936 None:intergenic
AGTTCTTGGCAAAAGACCTT+TGG 0.382985 4_4:+18143725 None:intergenic
GAAAATCATGTCGGTTAAGA+TGG 0.389252 4_4:-18143701 Msa0672770:CDS
AATTTGGAAAGTGAACTAAA+TGG 0.393704 4_4:-18142104 Msa0672770:CDS
ACTTACCCAACTTCTTATAT+GGG 0.406058 4_4:-18142185 Msa0672770:CDS
TGCTGCTTTGATGGTGGTGA+TGG 0.407537 4_4:+18142702 None:intergenic
AGGGCCAATTTGGGAACAAA+TGG 0.408226 4_4:-18142824 Msa0672770:CDS
ACAAATATGGTCCTAGAGAT+TGG 0.416347 4_4:-18143761 Msa0672770:CDS
AAGGGTGGTGATTGAACTAC+AGG 0.423925 4_4:-18142844 Msa0672770:CDS
AAATGGAATTATTGAGTTTG+AGG 0.424108 4_4:-18142087 Msa0672770:CDS
TTGAACTACAGGGCCAATTT+GGG 0.426312 4_4:-18142833 Msa0672770:CDS
TTGCCAAGTCTTGGACTTGA+AGG 0.435753 4_4:-18141864 Msa0672770:CDS
TGAACAAGGTCTTGGCACTC+TGG 0.436596 4_4:+18141972 None:intergenic
TGTTTCCCATATAAGAAGTT+GGG 0.440519 4_4:+18142180 None:intergenic
GTCCATAAAATTGGGGTCAA+AGG 0.440887 4_4:+18141944 None:intergenic
TCTTGGCACTCTGGGAATAG+TGG 0.453927 4_4:+18141981 None:intergenic
TCCATAAAATTGGGGTCAAA+GGG 0.456231 4_4:+18141945 None:intergenic
TTGTTTCCCATATAAGAAGT+TGG 0.464251 4_4:+18142179 None:intergenic
GATGGTGGTGATGGTGTCCT+TGG 0.466017 4_4:+18142711 None:intergenic
GGAACTAGGTTGCCAAGTCT+TGG 0.466768 4_4:-18141873 Msa0672770:CDS
AAATCAAGTAAAAGTTGAAA+AGG 0.470372 4_4:-18142655 Msa0672770:intron
CTATTTCAGGTTCCTGAATG+TGG 0.476424 4_4:-18142233 Msa0672770:intron
AGGGATCTTGAACAAGGTCT+TGG 0.494997 4_4:+18141964 None:intergenic
CAAAAGACCTTTGGATCGAA+TGG 0.500376 4_4:+18143734 None:intergenic
AGTGTTTGGAGCAAGAAGAA+TGG 0.502724 4_4:-18141894 Msa0672770:CDS
TTCATTAGAGGAAGAAAGGG+TGG 0.503576 4_4:-18142859 Msa0672770:CDS
ATCTGTGATTCAGGGAGTAA+TGG 0.504206 4_4:+18142011 None:intergenic
GAACAAGGTCTTGGCACTCT+GGG 0.512429 4_4:+18141973 None:intergenic
CGAATGGAGCTCCAATCTCT+AGG 0.517393 4_4:+18143750 None:intergenic
ATCAAAGCAGCAGAAACACA+AGG 0.531957 4_4:-18142691 Msa0672770:CDS
AAAATTGCTACATATTTGGA+AGG 0.543315 4_4:-18142798 Msa0672770:CDS
TCATCTTCTTCACTACTCCA+TGG 0.545375 4_4:+18143804 None:intergenic
TGTTTCTGCTGCTTTGATGG+TGG 0.546809 4_4:+18142696 None:intergenic
GGGCCAATTTGGGAACAAAT+GGG 0.547359 4_4:-18142823 Msa0672770:CDS
TTTCCTTCAAGTCCAAGACT+TGG 0.558372 4_4:+18141861 None:intergenic
TTGGCTTTGTTAAATCTGGA+AGG 0.560135 4_4:+18142135 None:intergenic
ATGGAAAGAGAATATGAAAG+AGG 0.565781 4_4:-18143843 Msa0672770:CDS
AAAATCATGTCGGTTAAGAT+GGG 0.567797 4_4:-18143700 Msa0672770:CDS
GGAGCAAGAAGAATGGAACT+AGG 0.574079 4_4:-18141887 Msa0672770:CDS
TGGAGCTCCATTCGATCCAA+AGG 0.580870 4_4:-18143741 Msa0672770:CDS
TTCTTATATGGGAAACAAAG+AGG 0.593324 4_4:-18142174 Msa0672770:CDS
GAAAGTCCATCTGTGATTCA+GGG 0.593626 4_4:+18142003 None:intergenic
ATTACTCCCTGAATCACAGA+TGG 0.605254 4_4:-18142009 Msa0672770:CDS
GGATGGAGAGGAATTATCCA+AGG 0.606339 4_4:-18142728 Msa0672770:CDS
TGCTGATGAAGACTCAAATG+AGG 0.614303 4_4:+18142043 None:intergenic
ATGTGGTTCAAATCAGCTTG+AGG 0.615982 4_4:-18142216 Msa0672770:CDS
AATGAGGGTACTGTGTGAAG+TGG 0.635827 4_4:+18142059 None:intergenic
CAAACATGTCCATAAAATTG+GGG 0.636075 4_4:+18141937 None:intergenic
GGTCAAAGGGATCTTGAACA+AGG 0.644333 4_4:+18141958 None:intergenic
GCTGATGAAGACTCAAATGA+GGG 0.648150 4_4:+18142044 None:intergenic
AAATTGCTACATATTTGGAA+GGG 0.659564 4_4:-18142797 Msa0672770:CDS
CAAGAACTGGAAAATCATGT+CGG 0.674438 4_4:-18143710 Msa0672770:CDS
TCAAAGCAGCAGAAACACAA+GGG 0.678275 4_4:-18142690 Msa0672770:CDS
GGGTACTGTGTGAAGTGGAG+TGG 0.686347 4_4:+18142064 None:intergenic
AGGGTGGTGATTGAACTACA+GGG 0.755598 4_4:-18142843 Msa0672770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATAACAATAATTAAAATT+AGG + chr4_4:18142005-18142024 None:intergenic 10.0%
!! GTATAACAATAATTAAAATT+AGG + chr4_4:18142005-18142024 None:intergenic 10.0%
!!! AATTTAGAATTAAAAAAACC+AGG + chr4_4:18142177-18142196 None:intergenic 15.0%
!!! TGGTTTTTTTAATTCTAAAT+TGG - chr4_4:18142176-18142195 Msa0672770:CDS 15.0%
!!! AAATACATTGCTATATTTTT+GGG + chr4_4:18142451-18142470 None:intergenic 15.0%
!!! AATTTAGAATTAAAAAAACC+AGG + chr4_4:18142177-18142196 None:intergenic 15.0%
!!! TGGTTTTTTTAATTCTAAAT+TGG - chr4_4:18142176-18142195 Msa0672770:CDS 15.0%
!!! AAATACATTGCTATATTTTT+GGG + chr4_4:18142451-18142470 None:intergenic 15.0%
!! TTGAAACATGTTAACAAATA+TGG - chr4_4:18141857-18141876 Msa0672770:CDS 20.0%
!! ATAACACCAAAAATTTGAAA+GGG + chr4_4:18142214-18142233 None:intergenic 20.0%
!! AATAACACCAAAAATTTGAA+AGG + chr4_4:18142215-18142234 None:intergenic 20.0%
!! TTGATTCAATTATACTTCAT+AGG - chr4_4:18142388-18142407 Msa0672770:intron 20.0%
!!! CAAATACATTGCTATATTTT+TGG + chr4_4:18142452-18142471 None:intergenic 20.0%
!!! TTGTTTGTTTCTACTATTTT+TGG + chr4_4:18142512-18142531 None:intergenic 20.0%
!! ACAAACACTGTTAAATTAAA+CGG + chr4_4:18142672-18142691 None:intergenic 20.0%
!! AAATCAAGTAAAAGTTGAAA+AGG - chr4_4:18142976-18142995 Msa0672770:intron 20.0%
!! TCAAAATGATTATGTAATCA+CGG + chr4_4:18143082-18143101 None:intergenic 20.0%
!! TTGAAACATGTTAACAAATA+TGG - chr4_4:18141857-18141876 Msa0672770:CDS 20.0%
!! ATAACACCAAAAATTTGAAA+GGG + chr4_4:18142214-18142233 None:intergenic 20.0%
!! AATAACACCAAAAATTTGAA+AGG + chr4_4:18142215-18142234 None:intergenic 20.0%
!! TTGATTCAATTATACTTCAT+AGG - chr4_4:18142388-18142407 Msa0672770:intron 20.0%
!!! CAAATACATTGCTATATTTT+TGG + chr4_4:18142452-18142471 None:intergenic 20.0%
!!! TTGTTTGTTTCTACTATTTT+TGG + chr4_4:18142512-18142531 None:intergenic 20.0%
!! ACAAACACTGTTAAATTAAA+CGG + chr4_4:18142672-18142691 None:intergenic 20.0%
!! AAATCAAGTAAAAGTTGAAA+AGG - chr4_4:18142976-18142995 Msa0672770:intron 20.0%
!! TCAAAATGATTATGTAATCA+CGG + chr4_4:18143082-18143101 None:intergenic 20.0%
! GAAAGAGGTTACATAAAAAA+AGG - chr4_4:18141803-18141822 Msa0672770:CDS 25.0%
!!! TTGTGTTTTGTGTTTTGTTA+TGG - chr4_4:18142089-18142108 Msa0672770:CDS 25.0%
! AGAATTAAAAAAACCAGGAA+AGG + chr4_4:18142172-18142191 None:intergenic 25.0%
!!! TATATTTTTGGGATAAACCT+TGG + chr4_4:18142440-18142459 None:intergenic 25.0%
! AAGAAGTTACATTTATTGCA+AGG + chr4_4:18142575-18142594 None:intergenic 25.0%
!!! TTTGTTTTGTGATGAAAGTT+TGG - chr4_4:18142716-18142735 Msa0672770:CDS 25.0%
!! TTCCAAATATGTAGCAATTT+TGG + chr4_4:18142834-18142853 None:intergenic 25.0%
! AAAATTGCTACATATTTGGA+AGG - chr4_4:18142833-18142852 Msa0672770:CDS 25.0%
! AAATTGCTACATATTTGGAA+GGG - chr4_4:18142834-18142853 Msa0672770:CDS 25.0%
!! ACAATGATGTGAAGAATTTT+TGG - chr4_4:18142864-18142883 Msa0672770:CDS 25.0%
!! TTGAAATGTCCAATTTTGTT+CGG - chr4_4:18143098-18143117 Msa0672770:intron 25.0%
!! ATGAAATGTCCAATTTTGTT+CGG - chr4_4:18143162-18143181 Msa0672770:intron 25.0%
!!! AAACGATAATTTTAGTGTGA+AGG - chr4_4:18143308-18143327 Msa0672770:intron 25.0%
!!! AACGATAATTTTAGTGTGAA+GGG - chr4_4:18143309-18143328 Msa0672770:intron 25.0%
! ACATGAAAGATTAGAAAGTA+TGG - chr4_4:18143357-18143376 Msa0672770:intron 25.0%
! ATAGTGAAAATGTCTATTTC+AGG - chr4_4:18143385-18143404 Msa0672770:intron 25.0%
!! TTAGTTCACTTTCCAAATTT+TGG + chr4_4:18143526-18143545 None:intergenic 25.0%
! AATTTGGAAAGTGAACTAAA+TGG - chr4_4:18143527-18143546 Msa0672770:intron 25.0%
! AAATGGAATTATTGAGTTTG+AGG - chr4_4:18143544-18143563 Msa0672770:intron 25.0%
! TCAAACATGTCCATAAAATT+GGG + chr4_4:18143698-18143717 None:intergenic 25.0%
!!! AAAAATGTTCAGAAAGTGTT+TGG - chr4_4:18143723-18143742 Msa0672770:CDS 25.0%
! AAGTATTCAAAAATCTCAGT+TGG + chr4_4:18143836-18143855 None:intergenic 25.0%
! GAAAGAGGTTACATAAAAAA+AGG - chr4_4:18141803-18141822 Msa0672770:CDS 25.0%
!!! TTGTGTTTTGTGTTTTGTTA+TGG - chr4_4:18142089-18142108 Msa0672770:CDS 25.0%
! AGAATTAAAAAAACCAGGAA+AGG + chr4_4:18142172-18142191 None:intergenic 25.0%
!!! TATATTTTTGGGATAAACCT+TGG + chr4_4:18142440-18142459 None:intergenic 25.0%
! AAGAAGTTACATTTATTGCA+AGG + chr4_4:18142575-18142594 None:intergenic 25.0%
!!! TTTGTTTTGTGATGAAAGTT+TGG - chr4_4:18142716-18142735 Msa0672770:CDS 25.0%
!! TTCCAAATATGTAGCAATTT+TGG + chr4_4:18142834-18142853 None:intergenic 25.0%
! AAAATTGCTACATATTTGGA+AGG - chr4_4:18142833-18142852 Msa0672770:CDS 25.0%
! AAATTGCTACATATTTGGAA+GGG - chr4_4:18142834-18142853 Msa0672770:CDS 25.0%
!! ACAATGATGTGAAGAATTTT+TGG - chr4_4:18142864-18142883 Msa0672770:CDS 25.0%
!! TTGAAATGTCCAATTTTGTT+CGG - chr4_4:18143098-18143117 Msa0672770:intron 25.0%
!! ATGAAATGTCCAATTTTGTT+CGG - chr4_4:18143162-18143181 Msa0672770:intron 25.0%
!!! AAACGATAATTTTAGTGTGA+AGG - chr4_4:18143308-18143327 Msa0672770:intron 25.0%
!!! AACGATAATTTTAGTGTGAA+GGG - chr4_4:18143309-18143328 Msa0672770:intron 25.0%
! ACATGAAAGATTAGAAAGTA+TGG - chr4_4:18143357-18143376 Msa0672770:intron 25.0%
! ATAGTGAAAATGTCTATTTC+AGG - chr4_4:18143385-18143404 Msa0672770:intron 25.0%
!! TTAGTTCACTTTCCAAATTT+TGG + chr4_4:18143526-18143545 None:intergenic 25.0%
! AATTTGGAAAGTGAACTAAA+TGG - chr4_4:18143527-18143546 Msa0672770:intron 25.0%
! AAATGGAATTATTGAGTTTG+AGG - chr4_4:18143544-18143563 Msa0672770:intron 25.0%
! TCAAACATGTCCATAAAATT+GGG + chr4_4:18143698-18143717 None:intergenic 25.0%
!!! AAAAATGTTCAGAAAGTGTT+TGG - chr4_4:18143723-18143742 Msa0672770:CDS 25.0%
! AAGTATTCAAAAATCTCAGT+TGG + chr4_4:18143836-18143855 None:intergenic 25.0%
ATGGAAAGAGAATATGAAAG+AGG - chr4_4:18141788-18141807 Msa0672770:CDS 30.0%
GTTACATAAAAAAAGGACCA+TGG - chr4_4:18141810-18141829 Msa0672770:CDS 30.0%
! AAAATCATGTCGGTTAAGAT+GGG - chr4_4:18141931-18141950 Msa0672770:CDS 30.0%
!!! TGTTACTACGTTTTCAAGTT+GGG + chr4_4:18141971-18141990 None:intergenic 30.0%
!!! TTGTTACTACGTTTTCAAGT+TGG + chr4_4:18141972-18141991 None:intergenic 30.0%
! TTCACACCCTTTCAAATTTT+TGG - chr4_4:18142205-18142224 Msa0672770:CDS 30.0%
GTAATCACATGTGTTGAAAT+TGG + chr4_4:18142293-18142312 None:intergenic 30.0%
TTACACTGACACATTAACAT+CGG + chr4_4:18142352-18142371 None:intergenic 30.0%
! TACTTCATAGGTTGAAACAT+TGG - chr4_4:18142400-18142419 Msa0672770:intron 30.0%
! ATAGGTTGAAACATTGGATA+TGG - chr4_4:18142406-18142425 Msa0672770:intron 30.0%
TGCTATTATTGTTCAAGTGT+TGG - chr4_4:18142617-18142636 Msa0672770:intron 30.0%
GCTATTATTGTTCAAGTGTT+GGG - chr4_4:18142618-18142637 Msa0672770:intron 30.0%
! CTATTATTGTTCAAGTGTTG+GGG - chr4_4:18142619-18142638 Msa0672770:intron 30.0%
!!! ACAGTGTTTGTTTTAGTGTA+CGG - chr4_4:18142681-18142700 Msa0672770:CDS 30.0%
ATGTGTGATTTCAATTGTAG+AGG - chr4_4:18142740-18142759 Msa0672770:CDS 30.0%
! AGTTTTCATTAGAGGAAGAA+AGG - chr4_4:18142768-18142787 Msa0672770:CDS 30.0%
! GTTTTCATTAGAGGAAGAAA+GGG - chr4_4:18142769-18142788 Msa0672770:CDS 30.0%
ATGAATCATCCGATTAACAT+CGG - chr4_4:18143236-18143255 Msa0672770:intron 30.0%
TACTTACCCAACTTCTTATA+TGG - chr4_4:18143445-18143464 Msa0672770:intron 30.0%
ACTTACCCAACTTCTTATAT+GGG - chr4_4:18143446-18143465 Msa0672770:intron 30.0%
TGTTTCCCATATAAGAAGTT+GGG + chr4_4:18143454-18143473 None:intergenic 30.0%
TTGTTTCCCATATAAGAAGT+TGG + chr4_4:18143455-18143474 None:intergenic 30.0%
TTCTTATATGGGAAACAAAG+AGG - chr4_4:18143457-18143476 Msa0672770:intron 30.0%
!! TAGTTTGGCTTTGTTAAATC+TGG + chr4_4:18143503-18143522 None:intergenic 30.0%
AAAGCCAAACTACCAAAATT+TGG - chr4_4:18143511-18143530 Msa0672770:intron 30.0%
!! CTTTCCAAATTTTGGTAGTT+TGG + chr4_4:18143518-18143537 None:intergenic 30.0%
CAAACATGTCCATAAAATTG+GGG + chr4_4:18143697-18143716 None:intergenic 30.0%
CTCAAACATGTCCATAAAAT+TGG + chr4_4:18143699-18143718 None:intergenic 30.0%
ATGGAAAGAGAATATGAAAG+AGG - chr4_4:18141788-18141807 Msa0672770:CDS 30.0%
GTTACATAAAAAAAGGACCA+TGG - chr4_4:18141810-18141829 Msa0672770:CDS 30.0%
! AAAATCATGTCGGTTAAGAT+GGG - chr4_4:18141931-18141950 Msa0672770:CDS 30.0%
!!! TGTTACTACGTTTTCAAGTT+GGG + chr4_4:18141971-18141990 None:intergenic 30.0%
!!! TTGTTACTACGTTTTCAAGT+TGG + chr4_4:18141972-18141991 None:intergenic 30.0%
! TTCACACCCTTTCAAATTTT+TGG - chr4_4:18142205-18142224 Msa0672770:CDS 30.0%
GTAATCACATGTGTTGAAAT+TGG + chr4_4:18142293-18142312 None:intergenic 30.0%
TTACACTGACACATTAACAT+CGG + chr4_4:18142352-18142371 None:intergenic 30.0%
! TACTTCATAGGTTGAAACAT+TGG - chr4_4:18142400-18142419 Msa0672770:intron 30.0%
! ATAGGTTGAAACATTGGATA+TGG - chr4_4:18142406-18142425 Msa0672770:intron 30.0%
TGCTATTATTGTTCAAGTGT+TGG - chr4_4:18142617-18142636 Msa0672770:intron 30.0%
GCTATTATTGTTCAAGTGTT+GGG - chr4_4:18142618-18142637 Msa0672770:intron 30.0%
! CTATTATTGTTCAAGTGTTG+GGG - chr4_4:18142619-18142638 Msa0672770:intron 30.0%
!!! ACAGTGTTTGTTTTAGTGTA+CGG - chr4_4:18142681-18142700 Msa0672770:CDS 30.0%
ATGTGTGATTTCAATTGTAG+AGG - chr4_4:18142740-18142759 Msa0672770:CDS 30.0%
! AGTTTTCATTAGAGGAAGAA+AGG - chr4_4:18142768-18142787 Msa0672770:CDS 30.0%
! GTTTTCATTAGAGGAAGAAA+GGG - chr4_4:18142769-18142788 Msa0672770:CDS 30.0%
ATGAATCATCCGATTAACAT+CGG - chr4_4:18143236-18143255 Msa0672770:intron 30.0%
TACTTACCCAACTTCTTATA+TGG - chr4_4:18143445-18143464 Msa0672770:intron 30.0%
ACTTACCCAACTTCTTATAT+GGG - chr4_4:18143446-18143465 Msa0672770:intron 30.0%
TGTTTCCCATATAAGAAGTT+GGG + chr4_4:18143454-18143473 None:intergenic 30.0%
TTGTTTCCCATATAAGAAGT+TGG + chr4_4:18143455-18143474 None:intergenic 30.0%
TTCTTATATGGGAAACAAAG+AGG - chr4_4:18143457-18143476 Msa0672770:intron 30.0%
!! TAGTTTGGCTTTGTTAAATC+TGG + chr4_4:18143503-18143522 None:intergenic 30.0%
AAAGCCAAACTACCAAAATT+TGG - chr4_4:18143511-18143530 Msa0672770:intron 30.0%
!! CTTTCCAAATTTTGGTAGTT+TGG + chr4_4:18143518-18143537 None:intergenic 30.0%
CAAACATGTCCATAAAATTG+GGG + chr4_4:18143697-18143716 None:intergenic 30.0%
CTCAAACATGTCCATAAAAT+TGG + chr4_4:18143699-18143718 None:intergenic 30.0%
ACAAATATGGTCCTAGAGAT+TGG - chr4_4:18141870-18141889 Msa0672770:CDS 35.0%
CAAGAACTGGAAAATCATGT+CGG - chr4_4:18141921-18141940 Msa0672770:CDS 35.0%
! GAAAATCATGTCGGTTAAGA+TGG - chr4_4:18141930-18141949 Msa0672770:CDS 35.0%
ACGAATTATAGAAACCTCTG+TGG - chr4_4:18142253-18142272 Msa0672770:intron 35.0%
CGAATTATAGAAACCTCTGT+GGG - chr4_4:18142254-18142273 Msa0672770:intron 35.0%
! AGGATGCAAGTTTTCATTAG+AGG - chr4_4:18142760-18142779 Msa0672770:CDS 35.0%
GGCCAAAATTGCTACATATT+TGG - chr4_4:18142829-18142848 Msa0672770:CDS 35.0%
!!! TGAAGAATTTTTGGAGTAGC+AGG - chr4_4:18142873-18142892 Msa0672770:CDS 35.0%
! GTGAAGTATCCGAACAAAAT+TGG + chr4_4:18143110-18143129 None:intergenic 35.0%
TGGACATTTCATTGCAATGT+AGG + chr4_4:18143154-18143173 None:intergenic 35.0%
! GTGAAGTATCCGAACAAAAT+TGG + chr4_4:18143110-18143129 None:intergenic 35.0%
TTCTAGTGTCCGATGTTAAT+CGG + chr4_4:18143248-18143267 None:intergenic 35.0%
!! TTGGCTTTGTTAAATCTGGA+AGG + chr4_4:18143499-18143518 None:intergenic 35.0%
TCCATAAAATTGGGGTCAAA+GGG + chr4_4:18143689-18143708 None:intergenic 35.0%
AAGTTCAAACTGCTTCTTTC+AGG - chr4_4:18143805-18143824 Msa0672770:CDS 35.0%
ACAAATATGGTCCTAGAGAT+TGG - chr4_4:18141870-18141889 Msa0672770:CDS 35.0%
CAAGAACTGGAAAATCATGT+CGG - chr4_4:18141921-18141940 Msa0672770:CDS 35.0%
! GAAAATCATGTCGGTTAAGA+TGG - chr4_4:18141930-18141949 Msa0672770:CDS 35.0%
ACGAATTATAGAAACCTCTG+TGG - chr4_4:18142253-18142272 Msa0672770:intron 35.0%
CGAATTATAGAAACCTCTGT+GGG - chr4_4:18142254-18142273 Msa0672770:intron 35.0%
! AGGATGCAAGTTTTCATTAG+AGG - chr4_4:18142760-18142779 Msa0672770:CDS 35.0%
GGCCAAAATTGCTACATATT+TGG - chr4_4:18142829-18142848 Msa0672770:CDS 35.0%
!!! TGAAGAATTTTTGGAGTAGC+AGG - chr4_4:18142873-18142892 Msa0672770:CDS 35.0%
! GTGAAGTATCCGAACAAAAT+TGG + chr4_4:18143110-18143129 None:intergenic 35.0%
TGGACATTTCATTGCAATGT+AGG + chr4_4:18143154-18143173 None:intergenic 35.0%
! GTGAAGTATCCGAACAAAAT+TGG + chr4_4:18143110-18143129 None:intergenic 35.0%
TTCTAGTGTCCGATGTTAAT+CGG + chr4_4:18143248-18143267 None:intergenic 35.0%
!! TTGGCTTTGTTAAATCTGGA+AGG + chr4_4:18143499-18143518 None:intergenic 35.0%
TCCATAAAATTGGGGTCAAA+GGG + chr4_4:18143689-18143708 None:intergenic 35.0%
AAGTTCAAACTGCTTCTTTC+AGG - chr4_4:18143805-18143824 Msa0672770:CDS 35.0%
TCATCTTCTTCACTACTCCA+TGG + chr4_4:18141830-18141849 None:intergenic 40.0%
CAAAAGACCTTTGGATCGAA+TGG + chr4_4:18141900-18141919 None:intergenic 40.0%
AGTTCTTGGCAAAAGACCTT+TGG + chr4_4:18141909-18141928 None:intergenic 40.0%
! AAAGGTCTTTTGCCAAGAAC+TGG - chr4_4:18141908-18141927 Msa0672770:CDS 40.0%
! CGACATGATTTTCCAGTTCT+TGG + chr4_4:18141923-18141942 None:intergenic 40.0%
TGTTTATCTTGCTCCTTTCC+TGG - chr4_4:18142156-18142175 Msa0672770:CDS 40.0%
TGGATATGGCAATGTAACCA+AGG - chr4_4:18142420-18142439 Msa0672770:intron 40.0%
TTCATTAGAGGAAGAAAGGG+TGG - chr4_4:18142772-18142791 Msa0672770:CDS 40.0%
ATTGAACTACAGGGCCAATT+TGG - chr4_4:18142797-18142816 Msa0672770:CDS 40.0%
TTGAACTACAGGGCCAATTT+GGG - chr4_4:18142798-18142817 Msa0672770:CDS 40.0%
! TTTGGAGTAGCAGGAGAAAA+AGG - chr4_4:18142882-18142901 Msa0672770:intron 40.0%
!! TTGTGTTTCTGCTGCTTTGA+TGG + chr4_4:18142941-18142960 None:intergenic 40.0%
ATCAAAGCAGCAGAAACACA+AGG - chr4_4:18142940-18142959 Msa0672770:intron 40.0%
TCAAAGCAGCAGAAACACAA+GGG - chr4_4:18142941-18142960 Msa0672770:intron 40.0%
!! CTATTTCAGGTTCCTGAATG+TGG - chr4_4:18143398-18143417 Msa0672770:intron 40.0%
!! AGCTGATTTGAACCACATTC+AGG + chr4_4:18143413-18143432 None:intergenic 40.0%
ATGTGGTTCAAATCAGCTTG+AGG - chr4_4:18143415-18143434 Msa0672770:intron 40.0%
GCTGATGAAGACTCAAATGA+GGG + chr4_4:18143590-18143609 None:intergenic 40.0%
TGCTGATGAAGACTCAAATG+AGG + chr4_4:18143591-18143610 None:intergenic 40.0%
ATCTGTGATTCAGGGAGTAA+TGG + chr4_4:18143623-18143642 None:intergenic 40.0%
ATTACTCCCTGAATCACAGA+TGG - chr4_4:18143622-18143641 Msa0672770:intron 40.0%
GAAAGTCCATCTGTGATTCA+GGG + chr4_4:18143631-18143650 None:intergenic 40.0%
! TCCCTTTGACCCCAATTTTA+TGG - chr4_4:18143685-18143704 Msa0672770:CDS 40.0%
GTCCATAAAATTGGGGTCAA+AGG + chr4_4:18143690-18143709 None:intergenic 40.0%
! AGTGTTTGGAGCAAGAAGAA+TGG - chr4_4:18143737-18143756 Msa0672770:CDS 40.0%
TTTCCTTCAAGTCCAAGACT+TGG + chr4_4:18143773-18143792 None:intergenic 40.0%
TCATCTTCTTCACTACTCCA+TGG + chr4_4:18141830-18141849 None:intergenic 40.0%
CAAAAGACCTTTGGATCGAA+TGG + chr4_4:18141900-18141919 None:intergenic 40.0%
AGTTCTTGGCAAAAGACCTT+TGG + chr4_4:18141909-18141928 None:intergenic 40.0%
! AAAGGTCTTTTGCCAAGAAC+TGG - chr4_4:18141908-18141927 Msa0672770:CDS 40.0%
! CGACATGATTTTCCAGTTCT+TGG + chr4_4:18141923-18141942 None:intergenic 40.0%
TGTTTATCTTGCTCCTTTCC+TGG - chr4_4:18142156-18142175 Msa0672770:CDS 40.0%
TGGATATGGCAATGTAACCA+AGG - chr4_4:18142420-18142439 Msa0672770:intron 40.0%
TTCATTAGAGGAAGAAAGGG+TGG - chr4_4:18142772-18142791 Msa0672770:CDS 40.0%
ATTGAACTACAGGGCCAATT+TGG - chr4_4:18142797-18142816 Msa0672770:CDS 40.0%
TTGAACTACAGGGCCAATTT+GGG - chr4_4:18142798-18142817 Msa0672770:CDS 40.0%
! TTTGGAGTAGCAGGAGAAAA+AGG - chr4_4:18142882-18142901 Msa0672770:intron 40.0%
!! TTGTGTTTCTGCTGCTTTGA+TGG + chr4_4:18142941-18142960 None:intergenic 40.0%
ATCAAAGCAGCAGAAACACA+AGG - chr4_4:18142940-18142959 Msa0672770:intron 40.0%
TCAAAGCAGCAGAAACACAA+GGG - chr4_4:18142941-18142960 Msa0672770:intron 40.0%
!! CTATTTCAGGTTCCTGAATG+TGG - chr4_4:18143398-18143417 Msa0672770:intron 40.0%
!! AGCTGATTTGAACCACATTC+AGG + chr4_4:18143413-18143432 None:intergenic 40.0%
ATGTGGTTCAAATCAGCTTG+AGG - chr4_4:18143415-18143434 Msa0672770:intron 40.0%
GCTGATGAAGACTCAAATGA+GGG + chr4_4:18143590-18143609 None:intergenic 40.0%
TGCTGATGAAGACTCAAATG+AGG + chr4_4:18143591-18143610 None:intergenic 40.0%
ATCTGTGATTCAGGGAGTAA+TGG + chr4_4:18143623-18143642 None:intergenic 40.0%
ATTACTCCCTGAATCACAGA+TGG - chr4_4:18143622-18143641 Msa0672770:intron 40.0%
GAAAGTCCATCTGTGATTCA+GGG + chr4_4:18143631-18143650 None:intergenic 40.0%
! TCCCTTTGACCCCAATTTTA+TGG - chr4_4:18143685-18143704 Msa0672770:CDS 40.0%
GTCCATAAAATTGGGGTCAA+AGG + chr4_4:18143690-18143709 None:intergenic 40.0%
! AGTGTTTGGAGCAAGAAGAA+TGG - chr4_4:18143737-18143756 Msa0672770:CDS 40.0%
TTTCCTTCAAGTCCAAGACT+TGG + chr4_4:18143773-18143792 None:intergenic 40.0%
TAGAAACCTCTGTGGGTGAT+TGG - chr4_4:18142261-18142280 Msa0672770:intron 45.0%
AAGGGTGGTGATTGAACTAC+AGG - chr4_4:18142787-18142806 Msa0672770:CDS 45.0%
AGGGTGGTGATTGAACTACA+GGG - chr4_4:18142788-18142807 Msa0672770:CDS 45.0%
AGGGCCAATTTGGGAACAAA+TGG - chr4_4:18142807-18142826 Msa0672770:CDS 45.0%
GGGCCAATTTGGGAACAAAT+GGG - chr4_4:18142808-18142827 Msa0672770:CDS 45.0%
TGGCCCATTTGTTCCCAAAT+TGG + chr4_4:18142814-18142833 None:intergenic 45.0%
GAGTAGCAGGAGAAAAAGGA+TGG - chr4_4:18142886-18142905 Msa0672770:intron 45.0%
GGATGGAGAGGAATTATCCA+AGG - chr4_4:18142903-18142922 Msa0672770:intron 45.0%
!! TGTTTCTGCTGCTTTGATGG+TGG + chr4_4:18142938-18142957 None:intergenic 45.0%
!! AATGAGGGTACTGTGTGAAG+TGG + chr4_4:18143575-18143594 None:intergenic 45.0%
GGAAAGTCCATCTGTGATTC+AGG + chr4_4:18143632-18143651 None:intergenic 45.0%
AGGGATCTTGAACAAGGTCT+TGG + chr4_4:18143670-18143689 None:intergenic 45.0%
GGTCAAAGGGATCTTGAACA+AGG + chr4_4:18143676-18143695 None:intergenic 45.0%
GGAGCAAGAAGAATGGAACT+AGG - chr4_4:18143744-18143763 Msa0672770:CDS 45.0%
TTGCCAAGTCTTGGACTTGA+AGG - chr4_4:18143767-18143786 Msa0672770:CDS 45.0%
TAGAAACCTCTGTGGGTGAT+TGG - chr4_4:18142261-18142280 Msa0672770:intron 45.0%
AAGGGTGGTGATTGAACTAC+AGG - chr4_4:18142787-18142806 Msa0672770:CDS 45.0%
AGGGTGGTGATTGAACTACA+GGG - chr4_4:18142788-18142807 Msa0672770:CDS 45.0%
AGGGCCAATTTGGGAACAAA+TGG - chr4_4:18142807-18142826 Msa0672770:CDS 45.0%
GGGCCAATTTGGGAACAAAT+GGG - chr4_4:18142808-18142827 Msa0672770:CDS 45.0%
TGGCCCATTTGTTCCCAAAT+TGG + chr4_4:18142814-18142833 None:intergenic 45.0%
GAGTAGCAGGAGAAAAAGGA+TGG - chr4_4:18142886-18142905 Msa0672770:intron 45.0%
GGATGGAGAGGAATTATCCA+AGG - chr4_4:18142903-18142922 Msa0672770:intron 45.0%
!! TGTTTCTGCTGCTTTGATGG+TGG + chr4_4:18142938-18142957 None:intergenic 45.0%
!! AATGAGGGTACTGTGTGAAG+TGG + chr4_4:18143575-18143594 None:intergenic 45.0%
GGAAAGTCCATCTGTGATTC+AGG + chr4_4:18143632-18143651 None:intergenic 45.0%
AGGGATCTTGAACAAGGTCT+TGG + chr4_4:18143670-18143689 None:intergenic 45.0%
GGTCAAAGGGATCTTGAACA+AGG + chr4_4:18143676-18143695 None:intergenic 45.0%
GGAGCAAGAAGAATGGAACT+AGG - chr4_4:18143744-18143763 Msa0672770:CDS 45.0%
TTGCCAAGTCTTGGACTTGA+AGG - chr4_4:18143767-18143786 Msa0672770:CDS 45.0%
!! TATAACAATAATTAAAATTA+GGG + chr4_4:18142004-18142023 None:intergenic 5.0%
!! TATAACAATAATTAAAATTA+GGG + chr4_4:18142004-18142023 None:intergenic 5.0%
CGAATGGAGCTCCAATCTCT+AGG + chr4_4:18141884-18141903 None:intergenic 50.0%
TGGAGCTCCATTCGATCCAA+AGG - chr4_4:18141890-18141909 Msa0672770:CDS 50.0%
GCAGGAGAAAAAGGATGGAG+AGG - chr4_4:18142891-18142910 Msa0672770:intron 50.0%
!! TGCTGCTTTGATGGTGGTGA+TGG + chr4_4:18142932-18142951 None:intergenic 50.0%
GAGATAACCCTGCATTCACG+CGG + chr4_4:18143285-18143304 None:intergenic 50.0%
! TCTTGGCACTCTGGGAATAG+TGG + chr4_4:18143653-18143672 None:intergenic 50.0%
GAACAAGGTCTTGGCACTCT+GGG + chr4_4:18143661-18143680 None:intergenic 50.0%
TGAACAAGGTCTTGGCACTC+TGG + chr4_4:18143662-18143681 None:intergenic 50.0%
GGAACTAGGTTGCCAAGTCT+TGG - chr4_4:18143758-18143777 Msa0672770:CDS 50.0%
CGAATGGAGCTCCAATCTCT+AGG + chr4_4:18141884-18141903 None:intergenic 50.0%
TGGAGCTCCATTCGATCCAA+AGG - chr4_4:18141890-18141909 Msa0672770:CDS 50.0%
GCAGGAGAAAAAGGATGGAG+AGG - chr4_4:18142891-18142910 Msa0672770:intron 50.0%
!! TGCTGCTTTGATGGTGGTGA+TGG + chr4_4:18142932-18142951 None:intergenic 50.0%
GAGATAACCCTGCATTCACG+CGG + chr4_4:18143285-18143304 None:intergenic 50.0%
! TCTTGGCACTCTGGGAATAG+TGG + chr4_4:18143653-18143672 None:intergenic 50.0%
GAACAAGGTCTTGGCACTCT+GGG + chr4_4:18143661-18143680 None:intergenic 50.0%
TGAACAAGGTCTTGGCACTC+TGG + chr4_4:18143662-18143681 None:intergenic 50.0%
GGAACTAGGTTGCCAAGTCT+TGG - chr4_4:18143758-18143777 Msa0672770:CDS 50.0%
CGAACACCAATCACCCACAG+AGG + chr4_4:18142270-18142289 None:intergenic 55.0%
!! GATGGTGGTGATGGTGTCCT+TGG + chr4_4:18142923-18142942 None:intergenic 55.0%
TCGTATGACCGCGTGAATGC+AGG - chr4_4:18143274-18143293 Msa0672770:intron 55.0%
CGTATGACCGCGTGAATGCA+GGG - chr4_4:18143275-18143294 Msa0672770:intron 55.0%
! GGGTACTGTGTGAAGTGGAG+TGG + chr4_4:18143570-18143589 None:intergenic 55.0%
CGAACACCAATCACCCACAG+AGG + chr4_4:18142270-18142289 None:intergenic 55.0%
!! GATGGTGGTGATGGTGTCCT+TGG + chr4_4:18142923-18142942 None:intergenic 55.0%
TCGTATGACCGCGTGAATGC+AGG - chr4_4:18143274-18143293 Msa0672770:intron 55.0%
CGTATGACCGCGTGAATGCA+GGG - chr4_4:18143275-18143294 Msa0672770:intron 55.0%
! GGGTACTGTGTGAAGTGGAG+TGG + chr4_4:18143570-18143589 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 18141788 18143865 18141788 ID=Msa0672770;Name=Msa0672770
chr4_4 mRNA 18141788 18143865 18141788 ID=Msa0672770-mRNA-1;Parent=Msa0672770;Name=Msa0672770-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|296
chr4_4 exon 18143672 18143865 18143672 ID=Msa0672770-mRNA-1:exon:5324;Parent=Msa0672770-mRNA-1
chr4_4 exon 18142656 18142893 18142656 ID=Msa0672770-mRNA-1:exon:5323;Parent=Msa0672770-mRNA-1
chr4_4 exon 18141788 18142246 18141788 ID=Msa0672770-mRNA-1:exon:5322;Parent=Msa0672770-mRNA-1
chr4_4 CDS 18143672 18143865 18143672 ID=Msa0672770-mRNA-1:cds;Parent=Msa0672770-mRNA-1
chr4_4 CDS 18142656 18142893 18142656 ID=Msa0672770-mRNA-1:cds;Parent=Msa0672770-mRNA-1
chr4_4 CDS 18141788 18142246 18141788 ID=Msa0672770-mRNA-1:cds;Parent=Msa0672770-mRNA-1
Gene Sequence

>Msa0672770

ATGGAAAGAGAATATGAAAGAGGTTACATAAAAAAAGGACCATGGAGTAGTGAAGAAGATGAAGTGTTATTGAAACATGTTAACAAATATGGTCCTAGAGATTGGAGCTCCATTCGATCCAAAGGTCTTTTGCCAAGAACTGGAAAATCATGTCGGTTAAGATGGGTTAATAAGCTTAGACCCAACTTGAAAACAGGATGCAAGTTTTCATTAGAGGAAGAAAGGGTGGTGATTGAACTACAGGGCCAATTTGGGAACAAATGGGCCAAAATTGCTACATATTTGGAAGGGAGAACTGACAATGATGTGAAGAATTTTTGGAGTAGCAGGAGAAAAAGGATGGAGAGGAATTATCCAAGGACACCATCACCACCATCAAAGCAGCAGAAACACAAGGGAAAAGCTACTTCAAATCAAGTAAAAGTTGAAAAGGTTCCTGAATGTGGTTCAAATCAGCTTGAGGAAAATCTTACTTACCCAACTTCTTATATGGGAAACAAAGAGGAGTTCAAGATGATCAACCTTCCAGATTTAACAAAGCCAAACTACCAAAATTTGGAAAGTGAACTAAATGGAATTATTGAGTTTGAGGCCACTCCACTTCACACAGTACCCTCATTTGAGTCTTCATCAGCAAACAACTTTCCATTACTCCCTGAATCACAGATGGACTTTCCACTATTCCCAGAGTGCCAAGACCTTGTTCAAGATCCCTTTGACCCCAATTTTATGGACATGTTTGAGCAGAAAAAATGTTCAGAAAGTGTTTGGAGCAAGAAGAATGGAACTAGGTTGCCAAGTCTTGGACTTGAAGGAAATTCTCAGAGTACAAGTTCAAACTGCTTCTTTCAGGACATTCCAACTGAGATTTTTGAATACTTTTCTCAGTAA
Protein sequence

>Msa0672770

MEREYERGYIKKGPWSSEEDEVLLKHVNKYGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSLEEERVVIELQGQFGNKWAKIATYLEGRTDNDVKNFWSSRRKRMERNYPRTPSPPSKQQKHKGKATSNQVKVEKVPECGSNQLEENLTYPTSYMGNKEEFKMINLPDLTKPNYQNLESELNGIIEFEATPLHTVPSFESSSANNFPLLPESQMDFPLFPECQDLVQDPFDPNFMDMFEQKKCSESVWSKKNGTRLPSLGLEGNSQSTSSNCFFQDIPTEIFEYFSQ*