Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682430 | XP_039689000.1 | 80.690 | 145 | 15 | 1 | 1 | 132 | 61 | 205 | 4.13e-68 | 236 |
| Msa0682430 | XP_039689000.1 | 96.203 | 158 | 6 | 0 | 131 | 288 | 469 | 626 | 7.99e-102 | 325 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682430 | sp|Q9SZL8|FRS5_ARATH | 34.395 | 157 | 98 | 4 | 133 | 288 | 454 | 606 | 1.08e-20 | 95.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682430 | A0A2K3NAQ1 | 79.747 | 158 | 32 | 0 | 131 | 288 | 99 | 256 | 7.25e-86 | 273 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0682430 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682430 | MtrunA17_Chr5g0448761 | 32.484 | 157 | 101 | 4 | 133 | 288 | 445 | 597 | 4.78e-20 | 90.1 |
| Msa0682430 | MtrunA17_Chr1g0196541 | 33.125 | 160 | 101 | 3 | 133 | 288 | 370 | 527 | 7.76e-17 | 80.5 |
| Msa0682430 | MtrunA17_Chr4g0033611 | 37.838 | 111 | 58 | 3 | 13 | 121 | 75 | 176 | 1.70e-16 | 77.4 |
| Msa0682430 | MtrunA17_Chr6g0477261 | 30.625 | 160 | 105 | 3 | 133 | 288 | 259 | 416 | 2.28e-16 | 79.0 |
| Msa0682430 | MtrunA17_Chr2g0296781 | 30.000 | 160 | 106 | 3 | 133 | 288 | 370 | 527 | 2.56e-16 | 79.0 |
| Msa0682430 | MtrunA17_Chr2g0329421 | 34.815 | 135 | 76 | 4 | 5 | 136 | 18 | 143 | 5.26e-16 | 75.1 |
| Msa0682430 | MtrunA17_Chr3g0118611 | 31.013 | 158 | 104 | 3 | 131 | 288 | 321 | 473 | 1.81e-15 | 76.6 |
| Msa0682430 | MtrunA17_Chr1g0202341 | 31.013 | 158 | 106 | 3 | 131 | 288 | 427 | 581 | 2.46e-15 | 76.3 |
| Msa0682430 | MtrunA17_Chr5g0441581 | 27.673 | 159 | 109 | 3 | 133 | 287 | 398 | 554 | 6.02e-15 | 75.1 |
| Msa0682430 | MtrunA17_Chr5g0440451 | 32.704 | 159 | 96 | 5 | 133 | 288 | 426 | 576 | 8.50e-15 | 74.7 |
| Msa0682430 | MtrunA17_Chr2g0287651 | 31.875 | 160 | 101 | 4 | 131 | 287 | 449 | 603 | 2.81e-14 | 73.2 |
| Msa0682430 | MtrunA17_Chr7g0233911 | 35.043 | 117 | 65 | 3 | 10 | 123 | 30 | 138 | 6.28e-14 | 69.3 |
| Msa0682430 | MtrunA17_Chr1g0207551 | 29.208 | 202 | 123 | 8 | 97 | 288 | 370 | 561 | 1.89e-13 | 70.5 |
| Msa0682430 | MtrunA17_Chr5g0448511 | 27.564 | 156 | 110 | 3 | 133 | 288 | 217 | 369 | 5.83e-13 | 68.9 |
| Msa0682430 | MtrunA17_Chr2g0329031 | 29.936 | 157 | 103 | 5 | 133 | 288 | 383 | 533 | 1.63e-12 | 67.8 |
| Msa0682430 | MtrunA17_Chr3g0082121 | 33.974 | 156 | 94 | 5 | 133 | 287 | 414 | 561 | 1.66e-12 | 67.8 |
| Msa0682430 | MtrunA17_Chr1g0198761 | 29.487 | 156 | 103 | 3 | 133 | 288 | 436 | 584 | 4.32e-12 | 66.2 |
| Msa0682430 | MtrunA17_Chr2g0291581 | 29.814 | 161 | 107 | 2 | 133 | 288 | 434 | 593 | 7.76e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682430 | AT4G38180.1 | 34.395 | 157 | 98 | 4 | 133 | 288 | 454 | 606 | 1.09e-21 | 95.5 |
| Msa0682430 | AT2G27110.3 | 29.114 | 158 | 107 | 2 | 131 | 288 | 254 | 406 | 7.83e-16 | 78.2 |
| Msa0682430 | AT2G27110.2 | 29.114 | 158 | 107 | 2 | 131 | 288 | 399 | 551 | 1.01e-15 | 77.8 |
| Msa0682430 | AT2G27110.1 | 29.114 | 158 | 107 | 2 | 131 | 288 | 399 | 551 | 1.01e-15 | 77.8 |
| Msa0682430 | AT4G15090.1 | 28.205 | 156 | 108 | 3 | 133 | 288 | 430 | 581 | 1.79e-15 | 77.0 |
| Msa0682430 | AT4G15090.5 | 28.205 | 156 | 108 | 3 | 133 | 288 | 430 | 581 | 1.79e-15 | 77.0 |
| Msa0682430 | AT4G15090.3 | 28.205 | 156 | 108 | 3 | 133 | 288 | 430 | 581 | 1.79e-15 | 77.0 |
| Msa0682430 | AT4G15090.2 | 28.205 | 156 | 108 | 3 | 133 | 288 | 430 | 581 | 1.79e-15 | 77.0 |
| Msa0682430 | AT4G15090.4 | 28.205 | 156 | 108 | 3 | 133 | 288 | 430 | 581 | 1.79e-15 | 77.0 |
| Msa0682430 | AT3G06250.2 | 32.692 | 156 | 99 | 3 | 133 | 288 | 527 | 676 | 9.98e-15 | 74.7 |
| Msa0682430 | AT3G06250.1 | 32.692 | 156 | 99 | 3 | 133 | 288 | 527 | 676 | 9.98e-15 | 74.7 |
| Msa0682430 | AT3G06250.3 | 32.692 | 156 | 99 | 3 | 133 | 288 | 527 | 676 | 9.98e-15 | 74.7 |
| Msa0682430 | AT3G59470.2 | 37.607 | 117 | 62 | 3 | 7 | 121 | 75 | 182 | 4.73e-14 | 70.9 |
| Msa0682430 | AT3G59470.3 | 37.607 | 117 | 62 | 3 | 7 | 121 | 63 | 170 | 4.96e-14 | 70.9 |
| Msa0682430 | AT3G59470.1 | 37.607 | 117 | 62 | 3 | 7 | 121 | 63 | 170 | 4.96e-14 | 70.9 |
| Msa0682430 | AT4G38170.1 | 28.846 | 156 | 108 | 3 | 133 | 288 | 219 | 371 | 2.51e-13 | 70.5 |
| Msa0682430 | AT5G18960.2 | 30.769 | 156 | 102 | 3 | 133 | 288 | 551 | 700 | 5.21e-12 | 66.6 |
| Msa0682430 | AT5G18960.1 | 30.769 | 156 | 102 | 3 | 133 | 288 | 551 | 700 | 5.21e-12 | 66.6 |
| Msa0682430 | AT3G07500.1 | 30.909 | 110 | 68 | 2 | 13 | 121 | 32 | 134 | 7.86e-12 | 63.9 |
| Msa0682430 | AT4G19990.5 | 27.215 | 158 | 109 | 4 | 133 | 288 | 378 | 531 | 2.96e-11 | 64.3 |
| Msa0682430 | AT4G19990.1 | 27.215 | 158 | 109 | 4 | 133 | 288 | 321 | 474 | 2.96e-11 | 64.3 |
| Msa0682430 | AT4G19990.3 | 27.215 | 158 | 109 | 4 | 133 | 288 | 378 | 531 | 3.15e-11 | 64.3 |
| Msa0682430 | AT4G19990.4 | 27.215 | 158 | 109 | 4 | 133 | 288 | 378 | 531 | 3.15e-11 | 64.3 |
| Msa0682430 | AT4G19990.6 | 27.215 | 158 | 109 | 4 | 133 | 288 | 378 | 531 | 3.39e-11 | 63.9 |
| Msa0682430 | AT4G19990.2 | 27.215 | 158 | 109 | 4 | 133 | 288 | 378 | 531 | 3.39e-11 | 63.9 |
| Msa0682430 | AT4G19990.7 | 27.215 | 158 | 109 | 4 | 133 | 288 | 392 | 545 | 3.51e-11 | 63.9 |
| Msa0682430 | AT3G22170.2 | 23.718 | 156 | 115 | 3 | 133 | 288 | 439 | 590 | 5.49e-11 | 63.5 |
| Msa0682430 | AT3G22170.1 | 23.718 | 156 | 115 | 3 | 133 | 288 | 439 | 590 | 5.49e-11 | 63.5 |
Find 37 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATACCATCCTTCTTATT+TGG | 0.179317 | 4_4:-44003150 | None:intergenic |
| ATGTTAACTTGGTTGAATTT+TGG | 0.201090 | 4_4:+44004242 | Msa0682430:CDS |
| TTGCTCATGCAAAATGTTTC+AGG | 0.233582 | 4_4:+44004564 | Msa0682430:CDS |
| TTCTAAACCAAAACTATTGT+TGG | 0.324685 | 4_4:+44004333 | Msa0682430:CDS |
| CCACGTTCCAACAATAGTTT+TGG | 0.324928 | 4_4:-44004340 | None:intergenic |
| AATTCAACCAAGTTAACATT+AGG | 0.328343 | 4_4:-44004238 | None:intergenic |
| TCAAATACTTGTCCAATTGT+AGG | 0.344020 | 4_4:-44002988 | None:intergenic |
| GAAAGTGAGAATTCTTTCTA+TGG | 0.344600 | 4_4:+44004202 | Msa0682430:CDS |
| AAAGTGTCTTTGAAATATGC+TGG | 0.421516 | 4_4:-44004145 | None:intergenic |
| GATGAATTAAAGCCTACAAT+TGG | 0.432711 | 4_4:+44002976 | Msa0682430:intron |
| CTGAGAAACGGTCTCTTCAT+AGG | 0.440271 | 4_4:-44003318 | None:intergenic |
| GAAAATAAGAAAGATGAAGA+TGG | 0.456611 | 4_4:+44004454 | Msa0682430:CDS |
| CTGTCAAGGTTAAAAGAAGA+AGG | 0.460452 | 4_4:+44003187 | Msa0682430:CDS |
| TCTGAATCCTAATGTTAACT+TGG | 0.461262 | 4_4:+44004231 | Msa0682430:CDS |
| CTATGAAGAGACCGTTTCTC+AGG | 0.462729 | 4_4:+44003319 | Msa0682430:CDS |
| AATAGAAGTGCAACGACATA+AGG | 0.468480 | 4_4:+44004282 | Msa0682430:CDS |
| GCCAAATAAGAAGGATGGTA+TGG | 0.471408 | 4_4:+44003149 | Msa0682430:CDS |
| AAAATAAGAAAGATGAAGAT+GGG | 0.489609 | 4_4:+44004455 | Msa0682430:CDS |
| GGGTTATTTGCCAAATAAGA+AGG | 0.490320 | 4_4:+44003140 | Msa0682430:CDS |
| TGCAAAATGTTTCAGGCTGA+AGG | 0.500454 | 4_4:+44004571 | Msa0682430:CDS |
| TTCCTTGCAGACCTGAGAAA+CGG | 0.505141 | 4_4:-44003330 | None:intergenic |
| TGAATTATCGATTGCATGCG+TGG | 0.517713 | 4_4:+44004420 | Msa0682430:CDS |
| AGTTGATGTATCTTTGTCCA+TGG | 0.526717 | 4_4:-44002471 | None:intergenic |
| TAAGAAAGATGAAGATGGGA+TGG | 0.532467 | 4_4:+44004459 | Msa0682430:CDS |
| TATGATAATAGTGAGATCAA+TGG | 0.545302 | 4_4:+44004496 | Msa0682430:CDS |
| AGAAGGGCTTTAACAAGAGA+AGG | 0.550276 | 4_4:+44003204 | Msa0682430:CDS |
| TCGATTGCATGCGTGGATTG+TGG | 0.561800 | 4_4:+44004427 | Msa0682430:CDS |
| AAGTGTCTTTGAAATATGCT+GGG | 0.568081 | 4_4:-44004144 | None:intergenic |
| GTGAAGCAAGTGGATGTGTA+TGG | 0.586364 | 4_4:-44003296 | None:intergenic |
| TGTCAAGGTTAAAAGAAGAA+GGG | 0.589394 | 4_4:+44003188 | Msa0682430:CDS |
| GCAAAGTGAATCTACTGTCA+AGG | 0.592764 | 4_4:+44003173 | Msa0682430:CDS |
| TATTTGCCAAATAAGAAGGA+TGG | 0.599214 | 4_4:+44003144 | Msa0682430:CDS |
| GTATTTGATACGTTAGCAGA+AGG | 0.613843 | 4_4:+44003003 | Msa0682430:CDS |
| ACACACCAAAATTATCTACA+AGG | 0.625740 | 4_4:-44004598 | None:intergenic |
| CCAAAACTATTGTTGGAACG+TGG | 0.638878 | 4_4:+44004340 | Msa0682430:CDS |
| CTCTTCATAGGTGAAGCAAG+TGG | 0.639442 | 4_4:-44003306 | None:intergenic |
| TGTTGGAACGTGGTATCGAG+AGG | 0.648329 | 4_4:+44004350 | Msa0682430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTCAATAAAATAATAGAA+AGG | - | chr4_4:44002908-44002927 | None:intergenic | 15.0% |
| !! | AAAAAAGTTTAAGAAAAAGT+AGG | + | chr4_4:44003953-44003972 | Msa0682430:intron | 15.0% |
| !! | TCTTCAATAAAATAATAGAA+AGG | - | chr4_4:44002908-44002927 | None:intergenic | 15.0% |
| !! | AAAAAAGTTTAAGAAAAAGT+AGG | + | chr4_4:44003953-44003972 | Msa0682430:intron | 15.0% |
| !! | AACTAATTATAATATACCTG+AGG | - | chr4_4:44002509-44002528 | None:intergenic | 20.0% |
| !! | CAGGTATATTATAATTAGTT+TGG | + | chr4_4:44002509-44002528 | Msa0682430:intron | 20.0% |
| !!! | TTTTGTTCCTATTTTTTTGT+TGG | + | chr4_4:44002596-44002615 | Msa0682430:intron | 20.0% |
| !!! | TTCCTTTTTTTTTCTTAGTT+TGG | + | chr4_4:44002720-44002739 | Msa0682430:intron | 20.0% |
| !! | TACCAAACTAAGAAAAAAAA+AGG | - | chr4_4:44002725-44002744 | None:intergenic | 20.0% |
| !! | GGAAAACATAATAAATCAAA+AGG | - | chr4_4:44002887-44002906 | None:intergenic | 20.0% |
| !! | TTTAATTCATCATCACAATT+TGG | - | chr4_4:44002967-44002986 | None:intergenic | 20.0% |
| !!! | TTTTGATAGATTACTTTAGA+AGG | + | chr4_4:44003534-44003553 | Msa0682430:intron | 20.0% |
| !! | AGGAAAAATTATTCCTTATT+TGG | + | chr4_4:44003647-44003666 | Msa0682430:intron | 20.0% |
| !!! | GGAAAAATTATTCCTTATTT+GGG | + | chr4_4:44003648-44003667 | Msa0682430:intron | 20.0% |
| !!! | GAAAAATTATTCCTTATTTG+GGG | + | chr4_4:44003649-44003668 | Msa0682430:intron | 20.0% |
| !! | TTGAGTTAGAAAAGAATAAA+TGG | + | chr4_4:44004086-44004105 | Msa0682430:intron | 20.0% |
| !!! | ATATTTCAAAGACACTTTTA+TGG | + | chr4_4:44004150-44004169 | Msa0682430:CDS | 20.0% |
| !! | AAAATAAGAAAGATGAAGAT+GGG | + | chr4_4:44004455-44004474 | Msa0682430:CDS | 20.0% |
| !! | AACTAATTATAATATACCTG+AGG | - | chr4_4:44002509-44002528 | None:intergenic | 20.0% |
| !! | CAGGTATATTATAATTAGTT+TGG | + | chr4_4:44002509-44002528 | Msa0682430:intron | 20.0% |
| !!! | TTTTGTTCCTATTTTTTTGT+TGG | + | chr4_4:44002596-44002615 | Msa0682430:intron | 20.0% |
| !!! | TTCCTTTTTTTTTCTTAGTT+TGG | + | chr4_4:44002720-44002739 | Msa0682430:intron | 20.0% |
| !! | TACCAAACTAAGAAAAAAAA+AGG | - | chr4_4:44002725-44002744 | None:intergenic | 20.0% |
| !! | GGAAAACATAATAAATCAAA+AGG | - | chr4_4:44002887-44002906 | None:intergenic | 20.0% |
| !! | TTTAATTCATCATCACAATT+TGG | - | chr4_4:44002967-44002986 | None:intergenic | 20.0% |
| !!! | TTTTGATAGATTACTTTAGA+AGG | + | chr4_4:44003534-44003553 | Msa0682430:intron | 20.0% |
| !! | AGGAAAAATTATTCCTTATT+TGG | + | chr4_4:44003647-44003666 | Msa0682430:intron | 20.0% |
| !!! | GGAAAAATTATTCCTTATTT+GGG | + | chr4_4:44003648-44003667 | Msa0682430:intron | 20.0% |
| !!! | GAAAAATTATTCCTTATTTG+GGG | + | chr4_4:44003649-44003668 | Msa0682430:intron | 20.0% |
| !! | TTGAGTTAGAAAAGAATAAA+TGG | + | chr4_4:44004086-44004105 | Msa0682430:intron | 20.0% |
| !!! | ATATTTCAAAGACACTTTTA+TGG | + | chr4_4:44004150-44004169 | Msa0682430:CDS | 20.0% |
| !! | AAAATAAGAAAGATGAAGAT+GGG | + | chr4_4:44004455-44004474 | Msa0682430:CDS | 20.0% |
| !!! | ATTATAATTAGTTTGGCTTG+AGG | + | chr4_4:44002516-44002535 | Msa0682430:intron | 25.0% |
| ! | ACAAAAAACAACTATCTCTT+AGG | - | chr4_4:44002582-44002601 | None:intergenic | 25.0% |
| ! | AGTAGAACCAACAAAAAAAT+AGG | - | chr4_4:44002606-44002625 | None:intergenic | 25.0% |
| !! | TCATCGACTATAGATAAAAA+CGG | + | chr4_4:44003081-44003100 | Msa0682430:CDS | 25.0% |
| !!! | ATGCAAATGTTGTTTTCAAA+TGG | + | chr4_4:44003232-44003251 | Msa0682430:CDS | 25.0% |
| !!! | TGCAAATGTTGTTTTCAAAT+GGG | + | chr4_4:44003233-44003252 | Msa0682430:CDS | 25.0% |
| ! | ACTTATTAAAAGAACAGTGT+GGG | + | chr4_4:44003423-44003442 | Msa0682430:intron | 25.0% |
| ! | ATTCAAAGTCTTTAAATCTC+TGG | - | chr4_4:44003495-44003514 | None:intergenic | 25.0% |
| !! | ATGGTTGTTTGAAAAGTTTT+TGG | + | chr4_4:44003811-44003830 | Msa0682430:intron | 25.0% |
| ! | TGATCAGTTATTATAAGAGT+TGG | - | chr4_4:44003857-44003876 | None:intergenic | 25.0% |
| ! | GTTAGAAAAGAATAAATGGT+TGG | + | chr4_4:44004090-44004109 | Msa0682430:intron | 25.0% |
| ! | AATTCAACCAAGTTAACATT+AGG | - | chr4_4:44004241-44004260 | None:intergenic | 25.0% |
| !!! | ATGTTAACTTGGTTGAATTT+TGG | + | chr4_4:44004242-44004261 | Msa0682430:CDS | 25.0% |
| ! | TTCTAAACCAAAACTATTGT+TGG | + | chr4_4:44004333-44004352 | Msa0682430:CDS | 25.0% |
| ! | GAAAATAAGAAAGATGAAGA+TGG | + | chr4_4:44004454-44004473 | Msa0682430:CDS | 25.0% |
| ! | TATGATAATAGTGAGATCAA+TGG | + | chr4_4:44004496-44004515 | Msa0682430:CDS | 25.0% |
| !!! | ATTATAATTAGTTTGGCTTG+AGG | + | chr4_4:44002516-44002535 | Msa0682430:intron | 25.0% |
| ! | ACAAAAAACAACTATCTCTT+AGG | - | chr4_4:44002582-44002601 | None:intergenic | 25.0% |
| ! | AGTAGAACCAACAAAAAAAT+AGG | - | chr4_4:44002606-44002625 | None:intergenic | 25.0% |
| !! | TCATCGACTATAGATAAAAA+CGG | + | chr4_4:44003081-44003100 | Msa0682430:CDS | 25.0% |
| !!! | ATGCAAATGTTGTTTTCAAA+TGG | + | chr4_4:44003232-44003251 | Msa0682430:CDS | 25.0% |
| !!! | TGCAAATGTTGTTTTCAAAT+GGG | + | chr4_4:44003233-44003252 | Msa0682430:CDS | 25.0% |
| ! | ACTTATTAAAAGAACAGTGT+GGG | + | chr4_4:44003423-44003442 | Msa0682430:intron | 25.0% |
| ! | ATTCAAAGTCTTTAAATCTC+TGG | - | chr4_4:44003495-44003514 | None:intergenic | 25.0% |
| !! | ATGGTTGTTTGAAAAGTTTT+TGG | + | chr4_4:44003811-44003830 | Msa0682430:intron | 25.0% |
| ! | TGATCAGTTATTATAAGAGT+TGG | - | chr4_4:44003857-44003876 | None:intergenic | 25.0% |
| ! | GTTAGAAAAGAATAAATGGT+TGG | + | chr4_4:44004090-44004109 | Msa0682430:intron | 25.0% |
| ! | AATTCAACCAAGTTAACATT+AGG | - | chr4_4:44004241-44004260 | None:intergenic | 25.0% |
| !!! | ATGTTAACTTGGTTGAATTT+TGG | + | chr4_4:44004242-44004261 | Msa0682430:CDS | 25.0% |
| ! | TTCTAAACCAAAACTATTGT+TGG | + | chr4_4:44004333-44004352 | Msa0682430:CDS | 25.0% |
| ! | GAAAATAAGAAAGATGAAGA+TGG | + | chr4_4:44004454-44004473 | Msa0682430:CDS | 25.0% |
| ! | TATGATAATAGTGAGATCAA+TGG | + | chr4_4:44004496-44004515 | Msa0682430:CDS | 25.0% |
| !! | AACTTGTTTTCAAATTCCTC+AGG | + | chr4_4:44002490-44002509 | Msa0682430:CDS | 30.0% |
| GATGAATTAAAGCCTACAAT+TGG | + | chr4_4:44002976-44002995 | Msa0682430:intron | 30.0% | |
| TCAAATACTTGTCCAATTGT+AGG | - | chr4_4:44002991-44003010 | None:intergenic | 30.0% | |
| TATTTGCCAAATAAGAAGGA+TGG | + | chr4_4:44003144-44003163 | Msa0682430:CDS | 30.0% | |
| TGTCAAGGTTAAAAGAAGAA+GGG | + | chr4_4:44003188-44003207 | Msa0682430:CDS | 30.0% | |
| !!! | AAATGTTGTTTTCAAATGGG+TGG | + | chr4_4:44003236-44003255 | Msa0682430:CDS | 30.0% |
| !!! | AATGTTGTTTTCAAATGGGT+GGG | + | chr4_4:44003237-44003256 | Msa0682430:CDS | 30.0% |
| TCATGTAGTAGAGCAAATAT+AGG | + | chr4_4:44003383-44003402 | Msa0682430:intron | 30.0% | |
| ! | CACACTGTTCTTTTAATAAG+TGG | - | chr4_4:44003424-44003443 | None:intergenic | 30.0% |
| CACTTATTAAAAGAACAGTG+TGG | + | chr4_4:44003422-44003441 | Msa0682430:intron | 30.0% | |
| CTTATTAAAAGAACAGTGTG+GGG | + | chr4_4:44003424-44003443 | Msa0682430:intron | 30.0% | |
| TTATTAAAAGAACAGTGTGG+GGG | + | chr4_4:44003425-44003444 | Msa0682430:intron | 30.0% | |
| TCATACGCATAATAAAAGGA+TGG | - | chr4_4:44003575-44003594 | None:intergenic | 30.0% | |
| ! | ATCCTTTTATTATGCGTATG+AGG | + | chr4_4:44003574-44003593 | Msa0682430:intron | 30.0% |
| TACCTCATACGCATAATAAA+AGG | - | chr4_4:44003579-44003598 | None:intergenic | 30.0% | |
| ! | TTTTATTATGCGTATGAGGT+AGG | + | chr4_4:44003578-44003597 | Msa0682430:intron | 30.0% |
| AGAAAAGTGATTCATTCGTA+TGG | + | chr4_4:44003792-44003811 | Msa0682430:intron | 30.0% | |
| !! | TGAAAAGTTTTTGGAAGCAA+TGG | + | chr4_4:44003820-44003839 | Msa0682430:intron | 30.0% |
| !! | GAAAAGTTTTTGGAAGCAAT+GGG | + | chr4_4:44003821-44003840 | Msa0682430:intron | 30.0% |
| !! | ATTTTCTATAGCCACTTTCA+TGG | - | chr4_4:44003888-44003907 | None:intergenic | 30.0% |
| ! | AATGTTTCAAGTCATGTGTT+TGG | + | chr4_4:44004008-44004027 | Msa0682430:intron | 30.0% |
| ! | ATGTTTCAAGTCATGTGTTT+GGG | + | chr4_4:44004009-44004028 | Msa0682430:intron | 30.0% |
| AAATGAGTTTGAAGAGACTT+GGG | + | chr4_4:44004045-44004064 | Msa0682430:intron | 30.0% | |
| !! | AAGTGTCTTTGAAATATGCT+GGG | - | chr4_4:44004147-44004166 | None:intergenic | 30.0% |
| !! | AAAGTGTCTTTGAAATATGC+TGG | - | chr4_4:44004148-44004167 | None:intergenic | 30.0% |
| GAAAGTGAGAATTCTTTCTA+TGG | + | chr4_4:44004202-44004221 | Msa0682430:CDS | 30.0% | |
| TCTGAATCCTAATGTTAACT+TGG | + | chr4_4:44004231-44004250 | Msa0682430:CDS | 30.0% | |
| !! | AACTTGTTTTCAAATTCCTC+AGG | + | chr4_4:44002490-44002509 | Msa0682430:CDS | 30.0% |
| GATGAATTAAAGCCTACAAT+TGG | + | chr4_4:44002976-44002995 | Msa0682430:intron | 30.0% | |
| TCAAATACTTGTCCAATTGT+AGG | - | chr4_4:44002991-44003010 | None:intergenic | 30.0% | |
| TATTTGCCAAATAAGAAGGA+TGG | + | chr4_4:44003144-44003163 | Msa0682430:CDS | 30.0% | |
| TGTCAAGGTTAAAAGAAGAA+GGG | + | chr4_4:44003188-44003207 | Msa0682430:CDS | 30.0% | |
| !!! | AAATGTTGTTTTCAAATGGG+TGG | + | chr4_4:44003236-44003255 | Msa0682430:CDS | 30.0% |
| !!! | AATGTTGTTTTCAAATGGGT+GGG | + | chr4_4:44003237-44003256 | Msa0682430:CDS | 30.0% |
| TCATGTAGTAGAGCAAATAT+AGG | + | chr4_4:44003383-44003402 | Msa0682430:intron | 30.0% | |
| ! | CACACTGTTCTTTTAATAAG+TGG | - | chr4_4:44003424-44003443 | None:intergenic | 30.0% |
| CACTTATTAAAAGAACAGTG+TGG | + | chr4_4:44003422-44003441 | Msa0682430:intron | 30.0% | |
| CTTATTAAAAGAACAGTGTG+GGG | + | chr4_4:44003424-44003443 | Msa0682430:intron | 30.0% | |
| TTATTAAAAGAACAGTGTGG+GGG | + | chr4_4:44003425-44003444 | Msa0682430:intron | 30.0% | |
| TCATACGCATAATAAAAGGA+TGG | - | chr4_4:44003575-44003594 | None:intergenic | 30.0% | |
| ! | ATCCTTTTATTATGCGTATG+AGG | + | chr4_4:44003574-44003593 | Msa0682430:intron | 30.0% |
| TACCTCATACGCATAATAAA+AGG | - | chr4_4:44003579-44003598 | None:intergenic | 30.0% | |
| ! | TTTTATTATGCGTATGAGGT+AGG | + | chr4_4:44003578-44003597 | Msa0682430:intron | 30.0% |
| AGAAAAGTGATTCATTCGTA+TGG | + | chr4_4:44003792-44003811 | Msa0682430:intron | 30.0% | |
| !! | TGAAAAGTTTTTGGAAGCAA+TGG | + | chr4_4:44003820-44003839 | Msa0682430:intron | 30.0% |
| !! | GAAAAGTTTTTGGAAGCAAT+GGG | + | chr4_4:44003821-44003840 | Msa0682430:intron | 30.0% |
| !! | ATTTTCTATAGCCACTTTCA+TGG | - | chr4_4:44003888-44003907 | None:intergenic | 30.0% |
| ! | AATGTTTCAAGTCATGTGTT+TGG | + | chr4_4:44004008-44004027 | Msa0682430:intron | 30.0% |
| ! | ATGTTTCAAGTCATGTGTTT+GGG | + | chr4_4:44004009-44004028 | Msa0682430:intron | 30.0% |
| AAATGAGTTTGAAGAGACTT+GGG | + | chr4_4:44004045-44004064 | Msa0682430:intron | 30.0% | |
| !! | AAGTGTCTTTGAAATATGCT+GGG | - | chr4_4:44004147-44004166 | None:intergenic | 30.0% |
| !! | AAAGTGTCTTTGAAATATGC+TGG | - | chr4_4:44004148-44004167 | None:intergenic | 30.0% |
| GAAAGTGAGAATTCTTTCTA+TGG | + | chr4_4:44004202-44004221 | Msa0682430:CDS | 30.0% | |
| TCTGAATCCTAATGTTAACT+TGG | + | chr4_4:44004231-44004250 | Msa0682430:CDS | 30.0% | |
| AACCACCTAAGATTAATGCA+GGG | - | chr4_4:44002781-44002800 | None:intergenic | 35.0% | |
| AAACCACCTAAGATTAATGC+AGG | - | chr4_4:44002782-44002801 | None:intergenic | 35.0% | |
| GTATTTGATACGTTAGCAGA+AGG | + | chr4_4:44003003-44003022 | Msa0682430:CDS | 35.0% | |
| !! | CATTTTGTTTGCTCGAAAGA+GGG | + | chr4_4:44003120-44003139 | Msa0682430:CDS | 35.0% |
| GGGTTATTTGCCAAATAAGA+AGG | + | chr4_4:44003140-44003159 | Msa0682430:CDS | 35.0% | |
| TCCATACCATCCTTCTTATT+TGG | - | chr4_4:44003153-44003172 | None:intergenic | 35.0% | |
| CTGTCAAGGTTAAAAGAAGA+AGG | + | chr4_4:44003187-44003206 | Msa0682430:CDS | 35.0% | |
| !!! | ATGTTGTTTTCAAATGGGTG+GGG | + | chr4_4:44003238-44003257 | Msa0682430:CDS | 35.0% |
| ! | TTATTCCTTATTTGGGGATG+TGG | + | chr4_4:44003655-44003674 | Msa0682430:intron | 35.0% |
| ! | TTGATTTTTGCACCTTTCAC+CGG | + | chr4_4:44003716-44003735 | Msa0682430:intron | 35.0% |
| AGGTAATAGATTGTCGATGA+TGG | - | chr4_4:44003748-44003767 | None:intergenic | 35.0% | |
| GAATTCATCCTCATCATTCA+TGG | - | chr4_4:44003984-44004003 | None:intergenic | 35.0% | |
| ! | TGTTTCAAGTCATGTGTTTG+GGG | + | chr4_4:44004010-44004029 | Msa0682430:intron | 35.0% |
| CAAGTCTCTTCAAACTCATT+TGG | - | chr4_4:44004046-44004065 | None:intergenic | 35.0% | |
| CAAATGAGTTTGAAGAGACT+TGG | + | chr4_4:44004044-44004063 | Msa0682430:intron | 35.0% | |
| ! | TGTTTGAGATTTGAAGCACT+TGG | + | chr4_4:44004119-44004138 | Msa0682430:intron | 35.0% |
| ! | TTCAAAGACACTTTTATGGC+AGG | + | chr4_4:44004154-44004173 | Msa0682430:CDS | 35.0% |
| ! | TCAAAGACACTTTTATGGCA+GGG | + | chr4_4:44004155-44004174 | Msa0682430:CDS | 35.0% |
| ! | AATAGAAGTGCAACGACATA+AGG | + | chr4_4:44004282-44004301 | Msa0682430:CDS | 35.0% |
| TAAGAAAGATGAAGATGGGA+TGG | + | chr4_4:44004459-44004478 | Msa0682430:CDS | 35.0% | |
| TTGCTCATGCAAAATGTTTC+AGG | + | chr4_4:44004564-44004583 | Msa0682430:CDS | 35.0% | |
| AACCACCTAAGATTAATGCA+GGG | - | chr4_4:44002781-44002800 | None:intergenic | 35.0% | |
| AAACCACCTAAGATTAATGC+AGG | - | chr4_4:44002782-44002801 | None:intergenic | 35.0% | |
| GTATTTGATACGTTAGCAGA+AGG | + | chr4_4:44003003-44003022 | Msa0682430:CDS | 35.0% | |
| !! | CATTTTGTTTGCTCGAAAGA+GGG | + | chr4_4:44003120-44003139 | Msa0682430:CDS | 35.0% |
| GGGTTATTTGCCAAATAAGA+AGG | + | chr4_4:44003140-44003159 | Msa0682430:CDS | 35.0% | |
| TCCATACCATCCTTCTTATT+TGG | - | chr4_4:44003153-44003172 | None:intergenic | 35.0% | |
| CTGTCAAGGTTAAAAGAAGA+AGG | + | chr4_4:44003187-44003206 | Msa0682430:CDS | 35.0% | |
| !!! | ATGTTGTTTTCAAATGGGTG+GGG | + | chr4_4:44003238-44003257 | Msa0682430:CDS | 35.0% |
| ! | TTATTCCTTATTTGGGGATG+TGG | + | chr4_4:44003655-44003674 | Msa0682430:intron | 35.0% |
| ! | TTGATTTTTGCACCTTTCAC+CGG | + | chr4_4:44003716-44003735 | Msa0682430:intron | 35.0% |
| AGGTAATAGATTGTCGATGA+TGG | - | chr4_4:44003748-44003767 | None:intergenic | 35.0% | |
| GAATTCATCCTCATCATTCA+TGG | - | chr4_4:44003984-44004003 | None:intergenic | 35.0% | |
| ! | TGTTTCAAGTCATGTGTTTG+GGG | + | chr4_4:44004010-44004029 | Msa0682430:intron | 35.0% |
| CAAGTCTCTTCAAACTCATT+TGG | - | chr4_4:44004046-44004065 | None:intergenic | 35.0% | |
| CAAATGAGTTTGAAGAGACT+TGG | + | chr4_4:44004044-44004063 | Msa0682430:intron | 35.0% | |
| ! | TGTTTGAGATTTGAAGCACT+TGG | + | chr4_4:44004119-44004138 | Msa0682430:intron | 35.0% |
| ! | TTCAAAGACACTTTTATGGC+AGG | + | chr4_4:44004154-44004173 | Msa0682430:CDS | 35.0% |
| ! | TCAAAGACACTTTTATGGCA+GGG | + | chr4_4:44004155-44004174 | Msa0682430:CDS | 35.0% |
| ! | AATAGAAGTGCAACGACATA+AGG | + | chr4_4:44004282-44004301 | Msa0682430:CDS | 35.0% |
| TAAGAAAGATGAAGATGGGA+TGG | + | chr4_4:44004459-44004478 | Msa0682430:CDS | 35.0% | |
| TTGCTCATGCAAAATGTTTC+AGG | + | chr4_4:44004564-44004583 | Msa0682430:CDS | 35.0% | |
| CAACAACCAAATAGAACCAC+GGG | - | chr4_4:44002634-44002653 | None:intergenic | 40.0% | |
| CCAACAACCAAATAGAACCA+CGG | - | chr4_4:44002635-44002654 | None:intergenic | 40.0% | |
| AGAAGCCCTGCATTAATCTT+AGG | + | chr4_4:44002773-44002792 | Msa0682430:intron | 40.0% | |
| TAACAGCAGCACAAGAAATG+TGG | - | chr4_4:44002835-44002854 | None:intergenic | 40.0% | |
| GAAAAATACGCACTCTCTGT+CGG | + | chr4_4:44003039-44003058 | Msa0682430:CDS | 40.0% | |
| !! | GCATTTTGTTTGCTCGAAAG+AGG | + | chr4_4:44003119-44003138 | Msa0682430:CDS | 40.0% |
| GCCAAATAAGAAGGATGGTA+TGG | + | chr4_4:44003149-44003168 | Msa0682430:CDS | 40.0% | |
| GCAAAGTGAATCTACTGTCA+AGG | + | chr4_4:44003173-44003192 | Msa0682430:CDS | 40.0% | |
| ! | AGAAGGGCTTTAACAAGAGA+AGG | + | chr4_4:44003204-44003223 | Msa0682430:CDS | 40.0% |
| !!! | TGTTGTTTTCAAATGGGTGG+GGG | + | chr4_4:44003239-44003258 | Msa0682430:CDS | 40.0% |
| TGTGGGGGTTATGAAAATGT+TGG | + | chr4_4:44003440-44003459 | Msa0682430:intron | 40.0% | |
| CCCAAAAAACATGCTTCAGT+CGG | - | chr4_4:44003613-44003632 | None:intergenic | 40.0% | |
| !!! | CCGACTGAAGCATGTTTTTT+GGG | + | chr4_4:44003610-44003629 | Msa0682430:intron | 40.0% |
| !!! | AAGCATGTTTTTTGGGCAGA+TGG | + | chr4_4:44003617-44003636 | Msa0682430:intron | 40.0% |
| TTTGGGCAGATGGTATTTGT+AGG | + | chr4_4:44003627-44003646 | Msa0682430:intron | 40.0% | |
| TGAAACCACATCCCCAAATA+AGG | - | chr4_4:44003663-44003682 | None:intergenic | 40.0% | |
| ! | TGATTTTTGCACCTTTCACC+GGG | + | chr4_4:44003717-44003736 | Msa0682430:intron | 40.0% |
| ! | TTGTCGATGATGGTTTATCC+CGG | - | chr4_4:44003738-44003757 | None:intergenic | 40.0% |
| CAATCTATTACCTTCAGCGT+AGG | + | chr4_4:44003755-44003774 | Msa0682430:intron | 40.0% | |
| TGTTATAAGTCCTACGCTGA+AGG | - | chr4_4:44003768-44003787 | None:intergenic | 40.0% | |
| !! | AAGTTTTTGGAAGCAATGGG+CGG | + | chr4_4:44003824-44003843 | Msa0682430:intron | 40.0% |
| TCAAGATCCTTCCATGAAAG+TGG | + | chr4_4:44003874-44003893 | Msa0682430:intron | 40.0% | |
| ! | TCTATAGCCACTTTCATGGA+AGG | - | chr4_4:44003884-44003903 | None:intergenic | 40.0% |
| CTACTCATAGATTGTGCATG+TGG | + | chr4_4:44003921-44003940 | Msa0682430:intron | 40.0% | |
| AGGTGTTTCCATGAATGATG+AGG | + | chr4_4:44003973-44003992 | Msa0682430:intron | 40.0% | |
| ! | CCACGTTCCAACAATAGTTT+TGG | - | chr4_4:44004343-44004362 | None:intergenic | 40.0% |
| CCAAAACTATTGTTGGAACG+TGG | + | chr4_4:44004340-44004359 | Msa0682430:CDS | 40.0% | |
| ! | TGAATTATCGATTGCATGCG+TGG | + | chr4_4:44004420-44004439 | Msa0682430:CDS | 40.0% |
| TGCAAAATGTTTCAGGCTGA+AGG | + | chr4_4:44004571-44004590 | Msa0682430:CDS | 40.0% | |
| CAACAACCAAATAGAACCAC+GGG | - | chr4_4:44002634-44002653 | None:intergenic | 40.0% | |
| CCAACAACCAAATAGAACCA+CGG | - | chr4_4:44002635-44002654 | None:intergenic | 40.0% | |
| AGAAGCCCTGCATTAATCTT+AGG | + | chr4_4:44002773-44002792 | Msa0682430:intron | 40.0% | |
| TAACAGCAGCACAAGAAATG+TGG | - | chr4_4:44002835-44002854 | None:intergenic | 40.0% | |
| GAAAAATACGCACTCTCTGT+CGG | + | chr4_4:44003039-44003058 | Msa0682430:CDS | 40.0% | |
| !! | GCATTTTGTTTGCTCGAAAG+AGG | + | chr4_4:44003119-44003138 | Msa0682430:CDS | 40.0% |
| GCCAAATAAGAAGGATGGTA+TGG | + | chr4_4:44003149-44003168 | Msa0682430:CDS | 40.0% | |
| GCAAAGTGAATCTACTGTCA+AGG | + | chr4_4:44003173-44003192 | Msa0682430:CDS | 40.0% | |
| ! | AGAAGGGCTTTAACAAGAGA+AGG | + | chr4_4:44003204-44003223 | Msa0682430:CDS | 40.0% |
| !!! | TGTTGTTTTCAAATGGGTGG+GGG | + | chr4_4:44003239-44003258 | Msa0682430:CDS | 40.0% |
| TGTGGGGGTTATGAAAATGT+TGG | + | chr4_4:44003440-44003459 | Msa0682430:intron | 40.0% | |
| CCCAAAAAACATGCTTCAGT+CGG | - | chr4_4:44003613-44003632 | None:intergenic | 40.0% | |
| !!! | CCGACTGAAGCATGTTTTTT+GGG | + | chr4_4:44003610-44003629 | Msa0682430:intron | 40.0% |
| !!! | AAGCATGTTTTTTGGGCAGA+TGG | + | chr4_4:44003617-44003636 | Msa0682430:intron | 40.0% |
| TTTGGGCAGATGGTATTTGT+AGG | + | chr4_4:44003627-44003646 | Msa0682430:intron | 40.0% | |
| TGAAACCACATCCCCAAATA+AGG | - | chr4_4:44003663-44003682 | None:intergenic | 40.0% | |
| ! | TGATTTTTGCACCTTTCACC+GGG | + | chr4_4:44003717-44003736 | Msa0682430:intron | 40.0% |
| ! | TTGTCGATGATGGTTTATCC+CGG | - | chr4_4:44003738-44003757 | None:intergenic | 40.0% |
| CAATCTATTACCTTCAGCGT+AGG | + | chr4_4:44003755-44003774 | Msa0682430:intron | 40.0% | |
| TGTTATAAGTCCTACGCTGA+AGG | - | chr4_4:44003768-44003787 | None:intergenic | 40.0% | |
| !! | AAGTTTTTGGAAGCAATGGG+CGG | + | chr4_4:44003824-44003843 | Msa0682430:intron | 40.0% |
| TCAAGATCCTTCCATGAAAG+TGG | + | chr4_4:44003874-44003893 | Msa0682430:intron | 40.0% | |
| ! | TCTATAGCCACTTTCATGGA+AGG | - | chr4_4:44003884-44003903 | None:intergenic | 40.0% |
| CTACTCATAGATTGTGCATG+TGG | + | chr4_4:44003921-44003940 | Msa0682430:intron | 40.0% | |
| AGGTGTTTCCATGAATGATG+AGG | + | chr4_4:44003973-44003992 | Msa0682430:intron | 40.0% | |
| ! | CCACGTTCCAACAATAGTTT+TGG | - | chr4_4:44004343-44004362 | None:intergenic | 40.0% |
| CCAAAACTATTGTTGGAACG+TGG | + | chr4_4:44004340-44004359 | Msa0682430:CDS | 40.0% | |
| ! | TGAATTATCGATTGCATGCG+TGG | + | chr4_4:44004420-44004439 | Msa0682430:CDS | 40.0% |
| TGCAAAATGTTTCAGGCTGA+AGG | + | chr4_4:44004571-44004590 | Msa0682430:CDS | 40.0% | |
| ! | CCGTGGTTCTATTTGGTTGT+TGG | + | chr4_4:44002632-44002651 | Msa0682430:intron | 45.0% |
| AGCCCTGCATTAATCTTAGG+TGG | + | chr4_4:44002776-44002795 | Msa0682430:intron | 45.0% | |
| ATAAAAACGGCGTGAAGCGT+TGG | + | chr4_4:44003094-44003113 | Msa0682430:CDS | 45.0% | |
| GTGAAGCAAGTGGATGTGTA+TGG | - | chr4_4:44003299-44003318 | None:intergenic | 45.0% | |
| CTCTTCATAGGTGAAGCAAG+TGG | - | chr4_4:44003309-44003328 | None:intergenic | 45.0% | |
| CTGAGAAACGGTCTCTTCAT+AGG | - | chr4_4:44003321-44003340 | None:intergenic | 45.0% | |
| CTATGAAGAGACCGTTTCTC+AGG | + | chr4_4:44003319-44003338 | Msa0682430:CDS | 45.0% | |
| TTCCTTGCAGACCTGAGAAA+CGG | - | chr4_4:44003333-44003352 | None:intergenic | 45.0% | |
| !!! | GCCGACTGAAGCATGTTTTT+TGG | + | chr4_4:44003609-44003628 | Msa0682430:intron | 45.0% |
| TGATGGTTTATCCCGGTGAA+AGG | - | chr4_4:44003731-44003750 | None:intergenic | 45.0% | |
| !! | CTTGGGCGTTTTTGATGACA+AGG | + | chr4_4:44004062-44004081 | Msa0682430:intron | 45.0% |
| ! | CCGTGGTTCTATTTGGTTGT+TGG | + | chr4_4:44002632-44002651 | Msa0682430:intron | 45.0% |
| AGCCCTGCATTAATCTTAGG+TGG | + | chr4_4:44002776-44002795 | Msa0682430:intron | 45.0% | |
| ATAAAAACGGCGTGAAGCGT+TGG | + | chr4_4:44003094-44003113 | Msa0682430:CDS | 45.0% | |
| GTGAAGCAAGTGGATGTGTA+TGG | - | chr4_4:44003299-44003318 | None:intergenic | 45.0% | |
| CTCTTCATAGGTGAAGCAAG+TGG | - | chr4_4:44003309-44003328 | None:intergenic | 45.0% | |
| CTGAGAAACGGTCTCTTCAT+AGG | - | chr4_4:44003321-44003340 | None:intergenic | 45.0% | |
| CTATGAAGAGACCGTTTCTC+AGG | + | chr4_4:44003319-44003338 | Msa0682430:CDS | 45.0% | |
| TTCCTTGCAGACCTGAGAAA+CGG | - | chr4_4:44003333-44003352 | None:intergenic | 45.0% | |
| !!! | GCCGACTGAAGCATGTTTTT+TGG | + | chr4_4:44003609-44003628 | Msa0682430:intron | 45.0% |
| TGATGGTTTATCCCGGTGAA+AGG | - | chr4_4:44003731-44003750 | None:intergenic | 45.0% | |
| !! | CTTGGGCGTTTTTGATGACA+AGG | + | chr4_4:44004062-44004081 | Msa0682430:intron | 45.0% |
| !!! | ATATTTATTTTGTTAATTTT+TGG | + | chr4_4:44002927-44002946 | Msa0682430:intron | 5.0% |
| !!! | ATATTTATTTTGTTAATTTT+TGG | + | chr4_4:44002927-44002946 | Msa0682430:intron | 5.0% |
| ! | TGCTGTCCCGTGGTTCTATT+TGG | + | chr4_4:44002625-44002644 | Msa0682430:intron | 50.0% |
| ! | GTTTTCAAATGGGTGGGGGA+AGG | + | chr4_4:44003243-44003262 | Msa0682430:CDS | 50.0% |
| GCGTATGAGGTAGGTGAAGA+AGG | + | chr4_4:44003587-44003606 | Msa0682430:intron | 50.0% | |
| ! | TGTTGGAACGTGGTATCGAG+AGG | + | chr4_4:44004350-44004369 | Msa0682430:CDS | 50.0% |
| ! | TCGATTGCATGCGTGGATTG+TGG | + | chr4_4:44004427-44004446 | Msa0682430:CDS | 50.0% |
| ! | TGCTGTCCCGTGGTTCTATT+TGG | + | chr4_4:44002625-44002644 | Msa0682430:intron | 50.0% |
| ! | GTTTTCAAATGGGTGGGGGA+AGG | + | chr4_4:44003243-44003262 | Msa0682430:CDS | 50.0% |
| GCGTATGAGGTAGGTGAAGA+AGG | + | chr4_4:44003587-44003606 | Msa0682430:intron | 50.0% | |
| ! | TGTTGGAACGTGGTATCGAG+AGG | + | chr4_4:44004350-44004369 | Msa0682430:CDS | 50.0% |
| ! | TCGATTGCATGCGTGGATTG+TGG | + | chr4_4:44004427-44004446 | Msa0682430:CDS | 50.0% |
| !! | TTGGTTCTACTGCTGTCCCG+TGG | + | chr4_4:44002615-44002634 | Msa0682430:intron | 55.0% |
| GACCGTTTCTCAGGTCTGCA+AGG | + | chr4_4:44003328-44003347 | Msa0682430:intron | 55.0% | |
| !! | TTGGTTCTACTGCTGTCCCG+TGG | + | chr4_4:44002615-44002634 | Msa0682430:intron | 55.0% |
| GACCGTTTCTCAGGTCTGCA+AGG | + | chr4_4:44003328-44003347 | Msa0682430:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 44002473 | 44004609 | 44002473 | ID=Msa0682430;Name=Msa0682430 |
| chr4_4 | mRNA | 44002473 | 44004609 | 44002473 | ID=Msa0682430-mRNA-1;Parent=Msa0682430;Name=Msa0682430-mRNA-1;_AED=0.18;_eAED=0.24;_QI=0|0|0|0.66|1|1|3|0|288 |
| chr4_4 | exon | 44002473 | 44002511 | 44002473 | ID=Msa0682430-mRNA-1:exon:10646;Parent=Msa0682430-mRNA-1 |
| chr4_4 | exon | 44002988 | 44003340 | 44002988 | ID=Msa0682430-mRNA-1:exon:10647;Parent=Msa0682430-mRNA-1 |
| chr4_4 | exon | 44004135 | 44004609 | 44004135 | ID=Msa0682430-mRNA-1:exon:10648;Parent=Msa0682430-mRNA-1 |
| chr4_4 | CDS | 44002473 | 44002511 | 44002473 | ID=Msa0682430-mRNA-1:cds;Parent=Msa0682430-mRNA-1 |
| chr4_4 | CDS | 44002988 | 44003340 | 44002988 | ID=Msa0682430-mRNA-1:cds;Parent=Msa0682430-mRNA-1 |
| chr4_4 | CDS | 44004135 | 44004609 | 44004135 | ID=Msa0682430-mRNA-1:cds;Parent=Msa0682430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
