AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0684140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0684140 MtrunA17_Chr1g0203051 48.694 536 268 3 167 697 19 552 0.0 542
Msa0684140 MtrunA17_Chr2g0287651 39.085 481 291 1 215 693 66 546 2.92e-120 390
Msa0684140 MtrunA17_Chr1g0202341 31.656 477 313 6 222 690 49 520 8.46e-82 280
Msa0684140 MtrunA17_Chr5g0448761 30.398 477 318 7 222 686 58 532 1.48e-78 274
Msa0684140 MtrunA17_Chr8g0363841 29.390 541 350 10 236 749 29 564 1.00e-72 255
Msa0684140 MtrunA17_Chr1g0198761 30.249 562 349 16 171 708 3 545 1.71e-70 250
Msa0684140 MtrunA17_Chr5g0431001 31.050 438 277 7 230 647 67 499 3.74e-64 226
Msa0684140 MtrunA17_Chr2g0308841 63.194 144 53 0 553 696 1 144 1.31e-63 216
Msa0684140 MtrunA17_Chr2g0324011 28.998 469 321 7 228 688 14 478 7.14e-63 224
Msa0684140 MtrunA17_Chr5g0441581 28.511 470 315 7 228 691 36 490 5.35e-62 224
Msa0684140 MtrunA17_Chr2g0296781 30.472 466 310 6 228 687 1 458 6.98e-62 225
Msa0684140 MtrunA17_Chr3g0082121 29.462 465 307 6 227 682 46 498 7.36e-61 221
Msa0684140 MtrunA17_Chr1g0207551 30.021 473 306 11 228 687 38 498 5.78e-58 215
Msa0684140 MtrunA17_Chr1g0203721 26.971 482 328 9 230 696 69 541 2.42e-55 207
Msa0684140 MtrunA17_Chr6g0458391 26.680 491 318 10 213 688 212 675 5.08e-55 205
Msa0684140 MtrunA17_Chr2g0276841 26.411 496 328 10 230 702 76 557 7.23e-54 201
Msa0684140 MtrunA17_Chr6g0477261 31.519 349 232 3 356 698 11 358 4.95e-53 197
Msa0684140 MtrunA17_Chr2g0294841 28.846 468 290 10 229 668 50 502 2.56e-52 197
Msa0684140 MtrunA17_Chr3g0080351 26.052 499 328 10 213 693 63 538 1.63e-51 196
Msa0684140 MtrunA17_Chr5g0448511 29.305 331 223 4 390 715 5 329 5.67e-51 189
Msa0684140 MtrunA17_Chr2g0287061 29.136 405 243 10 221 620 180 545 7.10e-51 193
Msa0684140 MtrunA17_Chr2g0329031 25.745 470 325 9 227 687 17 471 7.39e-51 192
Msa0684140 MtrunA17_Chr2g0291581 27.235 481 324 12 228 700 75 537 2.29e-50 190
Msa0684140 MtrunA17_Chr2g0291591 25.820 488 344 9 223 701 63 541 1.26e-49 186
Msa0684140 MtrunA17_Chr1g0196541 26.096 479 326 7 228 689 1 468 2.45e-48 184
Msa0684140 MtrunA17_Chr2g0290391 28.440 436 278 9 228 637 55 482 1.64e-46 178
Msa0684140 MtrunA17_Chr5g0440451 23.045 486 326 10 228 686 47 511 4.26e-46 179
Msa0684140 MtrunA17_Chr3g0118611 28.808 302 205 5 391 686 111 408 3.39e-45 176
Msa0684140 MtrunA17_Chr5g0434641 31.596 307 189 6 760 1047 4 308 7.27e-44 161
Msa0684140 MtrunA17_Chr1g0164591 28.526 312 211 3 305 611 3 307 8.24e-43 159
Msa0684140 MtrunA17_Chr1g0171741 37.698 252 137 7 102 350 24 258 8.18e-39 145
Msa0684140 MtrunA17_Chr1g0175901 31.985 272 175 3 786 1048 4 274 7.07e-38 143
Msa0684140 MtrunA17_Chr8g0356951 34.211 266 154 7 788 1037 47 307 1.08e-35 138
Msa0684140 MtrunA17_Chr0c01g0489371 29.667 300 175 8 757 1037 32 314 2.53e-31 125
Msa0684140 MtrunA17_Chr8g0389811 36.047 172 102 2 168 335 28 195 2.65e-31 122
Msa0684140 MtrunA17_Chr6g0459971 47.200 125 66 0 769 893 32 156 1.09e-28 114
Msa0684140 MtrunA17_Chr7g0258861 28.028 289 202 5 228 512 14 300 6.15e-28 115
Msa0684140 MtrunA17_Chr0c01g0489361 33.488 215 128 6 831 1032 1 213 1.67e-26 108
Msa0684140 MtrunA17_Chr2g0331371 44.882 127 70 0 204 330 35 161 1.14e-25 106
Msa0684140 MtrunA17_Chr8g0340801 42.056 107 62 0 335 441 1 107 1.54e-24 99.4
Msa0684140 MtrunA17_Chr6g0473421 44.792 96 53 0 204 299 35 130 7.86e-23 95.9
Msa0684140 MtrunA17_Chr1g0171531 27.311 238 137 3 769 1006 11 212 1.13e-18 86.3
Msa0684140 MtrunA17_Chr1g0172931 36.000 125 74 1 188 306 34 158 6.77e-18 82.0
Msa0684140 MtrunA17_Chr1g0149131 30.000 110 72 1 503 607 1 110 1.98e-13 68.2
Msa0684140 MtrunA17_Chr8g0356961 26.131 199 113 6 863 1049 1 177 2.11e-13 69.7
Msa0684140 MtrunA17_Chr4g0075451 28.655 171 117 3 380 548 46 213 4.69e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0684140 AT4G38180.1 31.579 475 315 6 220 686 69 541 5.66e-78 273
Msa0684140 AT4G15090.1 27.386 482 328 8 219 687 46 518 1.15e-56 211
Msa0684140 AT4G15090.5 27.386 482 328 8 219 687 46 518 1.15e-56 211
Msa0684140 AT4G15090.3 27.386 482 328 8 219 687 46 518 1.15e-56 211
Msa0684140 AT4G15090.2 27.386 482 328 8 219 687 46 518 1.15e-56 211
Msa0684140 AT4G15090.4 27.386 482 328 8 219 687 46 518 1.15e-56 211
Msa0684140 AT3G06250.2 27.500 480 295 10 223 696 189 621 1.19e-56 211
Msa0684140 AT3G06250.1 27.500 480 295 10 223 696 189 621 1.19e-56 211
Msa0684140 AT3G06250.3 27.500 480 295 10 223 696 189 621 1.19e-56 211
Msa0684140 AT1G10240.2 26.908 498 325 12 230 703 54 536 9.85e-54 200
Msa0684140 AT1G10240.1 26.908 498 325 12 230 703 54 536 9.85e-54 200
Msa0684140 AT1G52520.1 28.049 492 311 13 228 701 89 555 2.94e-53 199
Msa0684140 AT5G18960.2 26.453 499 291 13 223 700 210 653 1.07e-51 196
Msa0684140 AT5G18960.1 26.453 499 291 13 223 700 210 653 1.07e-51 196
Msa0684140 AT3G22170.2 26.078 487 316 11 220 687 66 527 5.67e-51 194
Msa0684140 AT3G22170.1 26.078 487 316 11 220 687 66 527 5.67e-51 194
Msa0684140 AT2G27110.2 25.106 470 315 10 223 686 48 486 1.02e-48 187
Msa0684140 AT2G27110.1 25.106 470 315 10 223 686 48 486 1.02e-48 187
Msa0684140 AT1G80010.1 27.743 483 307 13 228 686 99 563 1.40e-47 182
Msa0684140 AT1G76320.2 26.013 469 322 10 228 686 1 454 6.21e-47 181
Msa0684140 AT1G76320.1 26.013 469 322 10 228 686 1 454 6.40e-47 181
Msa0684140 AT1G76320.4 26.013 469 322 10 228 686 1 454 6.40e-47 181
Msa0684140 AT1G76320.3 26.013 469 322 10 228 686 1 454 6.56e-47 180
Msa0684140 AT5G28530.1 26.636 428 286 8 230 634 61 483 3.54e-45 175
Msa0684140 AT5G28530.3 26.636 428 286 8 230 634 61 483 3.84e-45 174
Msa0684140 AT5G28530.2 26.636 428 286 8 230 634 61 483 3.84e-45 174
Msa0684140 AT2G27110.3 28.000 300 208 4 392 686 45 341 3.77e-44 172
Msa0684140 AT2G32250.2 25.519 482 300 9 228 695 42 478 1.82e-43 171
Msa0684140 AT2G32250.4 25.519 482 300 9 228 695 42 478 1.82e-43 171
Msa0684140 AT2G32250.6 25.519 482 300 9 228 695 42 478 1.91e-43 171
Msa0684140 AT2G32250.1 25.519 482 300 9 228 695 42 478 1.91e-43 171
Msa0684140 AT2G32250.3 25.519 482 300 9 228 695 42 478 1.91e-43 171
Msa0684140 AT2G32250.5 25.519 482 300 9 228 695 42 478 2.02e-43 170
Msa0684140 AT2G32250.7 25.519 482 300 9 228 695 1 437 2.38e-43 170
Msa0684140 AT2G32250.8 25.519 482 300 9 228 695 1 437 2.45e-43 170
Msa0684140 AT4G19990.3 24.486 486 313 11 219 687 18 466 7.75e-40 159
Msa0684140 AT4G19990.4 24.486 486 313 11 219 687 18 466 7.75e-40 159
Msa0684140 AT4G19990.7 24.486 486 313 11 219 687 32 480 8.73e-40 159
Msa0684140 AT4G19990.5 24.486 486 313 11 219 687 18 466 9.11e-40 159
Msa0684140 AT4G19990.6 24.486 486 313 11 219 687 18 466 1.10e-39 159
Msa0684140 AT4G19990.2 24.486 486 313 11 219 687 18 466 1.10e-39 159
Msa0684140 AT4G38170.1 28.137 263 182 3 430 686 45 306 1.21e-37 149
Msa0684140 AT4G19990.1 23.928 443 286 9 261 687 2 409 5.27e-37 150
Msa0684140 AT5G28530.4 23.601 411 245 9 230 628 61 414 2.54e-29 125
Msa0684140 AT5G28530.5 23.601 411 245 9 230 628 61 414 2.80e-29 125

Find 213 sgRNAs with CRISPR-Local

Find 394 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGCTGTTGTGCTTGTTTA+TGG 0.137884 4_4:+47444574 Msa0684140:CDS
GTAGGCTGCAACACTTATTT+TGG 0.198254 4_4:+47446006 Msa0684140:CDS
TTGAACTCAGATACCCAATT+TGG 0.235347 4_4:+47447386 Msa0684140:intron
CACAACCAGACGATTATATT+TGG 0.237414 4_4:+47446146 Msa0684140:CDS
TAGAAATTGTATAAATTTGA+TGG 0.265672 4_4:+47444729 Msa0684140:intron
TTAATTGCATGATAGTTAAT+AGG 0.286323 4_4:-47448547 None:intergenic
ATTTGAAATGATGTTCAATA+TGG 0.293136 4_4:-47448735 None:intergenic
GTGGTTGATTTGTCCCAAAT+TGG 0.295416 4_4:-47447400 None:intergenic
CAAGCACCACAGGTGCAAAA+AGG 0.334575 4_4:-47444629 None:intergenic
ATGTTGCAAAGTTGCAATTT+GGG 0.334757 4_4:+47445400 Msa0684140:CDS
ATTCGAGGAAATTTCTTTGC+AGG 0.336104 4_4:+47446536 Msa0684140:CDS
TTTGCAATCTAGAAGGGTTC+AGG 0.337269 4_4:+47445538 Msa0684140:CDS
GATGTTGCAAAGTTGCAATT+TGG 0.338447 4_4:+47445399 Msa0684140:CDS
CCTGCAGAATTCTGCAGGTT+TGG 0.340800 4_4:+47447748 Msa0684140:CDS
TTGCAAATTCATATGTTTCA+TGG 0.349028 4_4:-47448656 None:intergenic
TCTGGAAATTTGAAGAACTT+TGG 0.359659 4_4:+47446426 Msa0684140:CDS
GTTGAGTACTGCATAGGATT+AGG 0.360597 4_4:+47449029 Msa0684140:CDS
GTGGTTGTTGGAGCAGTTAT+TGG 0.361804 4_4:+47446208 Msa0684140:CDS
ATGGTGGTGGTAACATAGTT+GGG 0.368143 4_4:+47444950 Msa0684140:CDS
ATCTGATAACCTAGCAGCTT+TGG 0.376380 4_4:-47448928 None:intergenic
ATTAAGTACTTTGGTAATGC+TGG 0.376669 4_4:+47445777 Msa0684140:CDS
CATAACCTATGATAACTCTT+TGG 0.380593 4_4:-47446311 None:intergenic
CAACACTGCAGTCCCGTATT+GGG 0.382219 4_4:-47446705 None:intergenic
CATGAAACCCGTTGCGGTTG+TGG 0.386866 4_4:+47445606 Msa0684140:CDS
CGGTTGATGAAAACCACAAT+AGG 0.390306 4_4:-47448425 None:intergenic
GATGCGTGATTACATCGATA+TGG 0.393225 4_4:-47445644 None:intergenic
TAACTATCATGCAATTAAAC+TGG 0.394404 4_4:+47448552 Msa0684140:CDS
TGAAAATGTTGATGACGATT+TGG 0.394802 4_4:+47445257 Msa0684140:CDS
CGGGTATCATTGTTATTGTT+AGG 0.396215 4_4:+47447791 Msa0684140:CDS
AATATACTTACAGAGCTAAC+TGG 0.411905 4_4:-47447293 None:intergenic
AAGATTCAAATTAAGTACTT+TGG 0.415197 4_4:+47445768 Msa0684140:CDS
CGATGTATGTTGGTTTGGTC+AGG 0.415563 4_4:+47448599 Msa0684140:CDS
TCAACACTGCAGTCCCGTAT+TGG 0.417007 4_4:-47446706 None:intergenic
AAACAAGCACAACAGCAGCC+AGG 0.421999 4_4:-47444570 None:intergenic
GGAAAGGACATCCCTTACTT+TGG 0.424703 4_4:+47448514 Msa0684140:CDS
TGAAGAACTTTGGAATGAAA+TGG 0.425098 4_4:+47446436 Msa0684140:CDS
ATGAAAGTGCTTAACAAAAT+CGG 0.425197 4_4:-47446633 None:intergenic
GATTTGAATGAAGATGATTC+TGG 0.426505 4_4:+47445195 Msa0684140:CDS
AATGAAATGGTTGAAAGGTT+TGG 0.426607 4_4:+47446449 Msa0684140:CDS
TAAATCTCTCAAACTCAATC+TGG 0.427083 4_4:+47449067 Msa0684140:CDS
TGTGCTTGTTTATGGTTAGC+AGG 0.429266 4_4:+47444582 Msa0684140:CDS
TGAACTCAGATACCCAATTT+GGG 0.430602 4_4:+47447387 Msa0684140:intron
TTGTATAAATTTGATGGTAA+AGG 0.431273 4_4:+47444735 Msa0684140:CDS
GTTGGTTTGGTCAGGAAGAA+TGG 0.434847 4_4:+47448607 Msa0684140:CDS
ATATTTATTCTTCTTATATG+TGG 0.438535 4_4:-47446087 None:intergenic
AACAAGCACAACAGCAGCCA+GGG 0.439201 4_4:-47444569 None:intergenic
CCACGATCCCCGCACCAAAC+AGG 0.440453 4_4:+47447419 Msa0684140:CDS
CCGCAACGGGTTTCATGTAC+TGG 0.444224 4_4:-47445600 None:intergenic
AATGGTGGTGGTAACATAGT+TGG 0.444260 4_4:+47444949 Msa0684140:CDS
GGACTGTGAATTCCAAAGTA+AGG 0.446758 4_4:-47448526 None:intergenic
AATCCTATGCAGTACTCAAC+AGG 0.449901 4_4:-47449026 None:intergenic
TACAATGATGTAGATGATTC+CGG 0.450103 4_4:+47445060 Msa0684140:CDS
TGCTTGGTGATTATGAAGTC+TGG 0.453304 4_4:+47446408 Msa0684140:CDS
TGGTTGATTTGTCCCAAATT+GGG 0.453968 4_4:-47447399 None:intergenic
ATCTTCATGTTCGAGTCCTC+AGG 0.454609 4_4:+47449129 Msa0684140:CDS
CATATAAGAAGAATAAATAT+AGG 0.454794 4_4:+47446090 Msa0684140:CDS
AAAACCAACCTGTTTGGTGC+GGG 0.454817 4_4:-47447427 None:intergenic
AGAGCAACCAGAAGAAAATT+CGG 0.455578 4_4:+47448702 Msa0684140:CDS
CAGTGTTGAAGACCAATCTT+AGG 0.457777 4_4:+47446720 Msa0684140:CDS
GATTCCAGTGAAGATGATTC+CGG 0.457855 4_4:+47445123 Msa0684140:CDS
GGTAGCCTGCAGAATTCTGC+AGG 0.459422 4_4:+47447743 Msa0684140:intron
CATCTGTGTTCATTGCCAAT+TGG 0.461095 4_4:+47448281 Msa0684140:CDS
ACACCTGAAAACACGACAAA+AGG 0.462741 4_4:-47446116 None:intergenic
AATTGGAAAACCAACCTGTT+TGG 0.462929 4_4:-47447433 None:intergenic
CCAATTGGAAGTTTCAACTT+GGG 0.464029 4_4:+47448296 Msa0684140:CDS
GCCAATTGGAAGTTTCAACT+TGG 0.465066 4_4:+47448295 Msa0684140:CDS
TAATCAAGAATGACTCTTTG+CGG 0.466827 4_4:-47448445 None:intergenic
ATTATTGTTTGAAAGGATGA+TGG 0.467849 4_4:-47448141 None:intergenic
CTGATGCTAAAGGTGCTGTT+AGG 0.468032 4_4:+47445919 Msa0684140:CDS
GTGGGTTGTTGGCTGCTCAT+AGG 0.473653 4_4:+47445727 Msa0684140:CDS
ATATTGAACATCATTTCAAA+TGG 0.475779 4_4:+47448737 Msa0684140:CDS
ATCATCTTCATTCACATCAC+TGG 0.475923 4_4:-47445166 None:intergenic
GCCGATCTTAATTCCCAATA+CGG 0.476889 4_4:+47446692 Msa0684140:CDS
CCTCTCAAGCGACCTAAGAT+TGG 0.477460 4_4:-47446732 None:intergenic
CAATCCGATGTATGTTGGTT+TGG 0.477619 4_4:+47448594 Msa0684140:CDS
GGTATATGTACGGATTCAAA+TGG 0.478941 4_4:+47444756 Msa0684140:CDS
TTAATGAATTGTATGAGAAA+AGG 0.479026 4_4:+47446492 Msa0684140:CDS
TGTATGAGAAAAGGAAAATG+TGG 0.479199 4_4:+47446501 Msa0684140:CDS
GTTGTTTCAAATGAGGTTGA+AGG 0.481152 4_4:+47446176 Msa0684140:CDS
GGTAATGCTGGAATCAAAGT+TGG 0.481875 4_4:+47445789 Msa0684140:CDS
CCCAAGTTGAAACTTCCAAT+TGG 0.482851 4_4:-47448296 None:intergenic
ATGGAATAAAAGACCTGGTC+CGG 0.483537 4_4:-47448168 None:intergenic
ATTGATGTTTGTTTCACATA+CGG 0.484648 4_4:+47445971 Msa0684140:CDS
TTTCGGGTGCACAACATGGA+TGG 0.484888 4_4:+47443977 None:intergenic
AACAATAATCACACCGGACC+AGG 0.485102 4_4:+47448155 Msa0684140:CDS
TGGTAACATAGTTGGGGAAG+GGG 0.487877 4_4:+47444957 Msa0684140:CDS
GACATTATTGCAACCTATTG+TGG 0.489804 4_4:+47448412 Msa0684140:CDS
CAGCTTTGGCAATCCATTGT+GGG 0.490963 4_4:-47448914 None:intergenic
TTCGAGGAAATTTCTTTGCA+GGG 0.495938 4_4:+47446537 Msa0684140:CDS
CGGTGTGATTATTGTTTGAA+AGG 0.496011 4_4:-47448148 None:intergenic
GTGCTTGTTTATGGTTAGCA+GGG 0.498092 4_4:+47444583 Msa0684140:CDS
CAAATATAATCGTCTGGTTG+TGG 0.498281 4_4:-47446145 None:intergenic
AAAGTTGCAATTTGGGAGCC+TGG 0.501207 4_4:+47445407 Msa0684140:CDS
GAATGCAATGCAATGTCAAA+AGG 0.501585 4_4:+47448991 Msa0684140:CDS
TACAGAGCTAACTGGTTCAA+AGG 0.501844 4_4:-47447285 None:intergenic
GATGTGAATGAAGATGATTC+TGG 0.503894 4_4:+47445084 Msa0684140:CDS
ATCTGAAGGCAAATCTGTCC+TGG 0.504578 4_4:+47448783 Msa0684140:CDS
TTTGGAATGAAATGGTTGAA+AGG 0.505319 4_4:+47446444 Msa0684140:CDS
TGACAAACATTGTGGGTTGT+TGG 0.505785 4_4:+47445716 Msa0684140:CDS
CGGTACCAAATATAATCGTC+TGG 0.506017 4_4:-47446151 None:intergenic
GATGATTCTGGTGATGTGAA+TGG 0.508917 4_4:+47445207 Msa0684140:CDS
ATCAAAGTTGGTCAAATGAT+TGG 0.515889 4_4:+47445801 Msa0684140:CDS
AGGGACGTACGTGTGGTTGT+TGG 0.515944 4_4:+47446196 Msa0684140:CDS
ATCATCATCATTCATATCAC+CGG 0.520920 4_4:-47445142 None:intergenic
CAATTGGAAGTTTCAACTTG+GGG 0.522447 4_4:+47448297 Msa0684140:CDS
GTATGTGAAACAAACATCAA+TGG 0.523303 4_4:-47445969 None:intergenic
TAATATGATTCTAATGAATG+AGG 0.524778 4_4:+47448956 Msa0684140:CDS
GAAATCAAGATTACCAATGT+TGG 0.526439 4_4:-47446363 None:intergenic
TATCATTGTTATTGTTAGGC+CGG 0.527013 4_4:+47447795 Msa0684140:CDS
AATCTCAAAGAAATTATCAC+AGG 0.528458 4_4:-47448347 None:intergenic
ATCACCGGAATCATCTTCAC+TGG 0.531171 4_4:-47445127 None:intergenic
GGTGCGTTTGCAAATGCTGC+TGG 0.531838 4_4:+47445822 Msa0684140:CDS
CCCGTATTGGGAATTAAGAT+CGG 0.532779 4_4:-47446693 None:intergenic
CATGTCAATCCGATGTATGT+TGG 0.533144 4_4:+47448589 Msa0684140:CDS
GTGGTAACATAGTTGGGGAA+GGG 0.533421 4_4:+47444956 Msa0684140:CDS
CAGTTATTGGTTGCAATGAA+AGG 0.534450 4_4:+47446221 Msa0684140:CDS
GGTACGATCTGTCATCCAAA+AGG 0.535783 4_4:+47446793 Msa0684140:CDS
ATGATGCTCGAGATAGCGTT+GGG 0.536833 4_4:+47444781 Msa0684140:CDS
ATCATCTTCATTCACATCAC+CGG 0.537455 4_4:-47445079 None:intergenic
CCAAACCTGCAGAATTCTGC+AGG 0.538527 4_4:-47447748 None:intergenic
TTGGAAGTTTCAACTTGGGG+TGG 0.539675 4_4:+47448300 Msa0684140:CDS
AGCTGCTAGGTTATCAGATG+TGG 0.539929 4_4:+47448932 Msa0684140:CDS
CATTTCATGATTGTGATCAA+AGG 0.546924 4_4:-47445688 None:intergenic
TTTGTTTGTTCTGTTGCCTC+GGG 0.547085 4_4:+47447772 Msa0684140:CDS
GACTGTGAATTCCAAAGTAA+GGG 0.548781 4_4:-47448525 None:intergenic
TTGTTTCAAATGAGGTTGAA+GGG 0.548979 4_4:+47446177 Msa0684140:CDS
ATGCGGATAATTGACAATGA+AGG 0.554526 4_4:+47448493 Msa0684140:CDS
ACTCGAACATGAAGATTCAA+TGG 0.556143 4_4:-47449122 None:intergenic
TGATGGTAAAGGTATATGTA+CGG 0.558527 4_4:+47444746 Msa0684140:CDS
AGTACTGCATAGGATTAGGT+TGG 0.559782 4_4:+47449033 Msa0684140:CDS
TAAGGTAGGATTTCTGAAGA+AGG 0.560018 4_4:+47445854 Msa0684140:CDS
TTCGGGTGCACAACATGGAT+GGG 0.560336 4_4:+47443978 None:intergenic
CCATCTGTAATTACAGCTAC+CGG 0.561484 4_4:-47446251 None:intergenic
GTTGGGGAAGGGGATAATGT+TGG 0.562201 4_4:+47444967 Msa0684140:CDS
AGGAACTTTGATGCTGGTGA+AGG 0.563162 4_4:+47448102 Msa0684140:intron
CCTGTTTGGTGCGGGGATCG+TGG 0.565539 4_4:-47447419 None:intergenic
TGTTGGTTTGCAAAGATGAA+CGG 0.565674 4_4:+47445450 Msa0684140:CDS
AATGATGCTCGAGATAGCGT+TGG 0.565808 4_4:+47444780 Msa0684140:CDS
GGTGGTAACATAGTTGGGGA+AGG 0.567379 4_4:+47444955 Msa0684140:CDS
GCAGCTTTGGCAATCCATTG+TGG 0.567554 4_4:-47448915 None:intergenic
TACCGCTGTTGTTTCAAATG+AGG 0.568284 4_4:+47446169 Msa0684140:CDS
CAACATGGATGGGTCTCCTA+TGG 0.568403 4_4:+47443988 None:intergenic
GAGTTTGGTTGTAGGTGAAG+TGG 0.569357 4_4:+47447923 Msa0684140:intron
AATGGATTGCCAAAGCTGCT+AGG 0.570126 4_4:+47448919 Msa0684140:CDS
TCTGAAGGTGTTATTCGACC+TGG 0.571594 4_4:+47448388 Msa0684140:CDS
TAGGTTGCAATAATGTCTCC+AGG 0.575147 4_4:-47448406 None:intergenic
CCGATCTTAATTCCCAATAC+GGG 0.578980 4_4:+47446693 Msa0684140:CDS
CGAAATGCAATGTCCAACAT+TGG 0.582417 4_4:+47446350 Msa0684140:CDS
TGCTTGTTTATGGTTAGCAG+GGG 0.583308 4_4:+47444584 Msa0684140:CDS
AATGTTGATGACGATTTGGA+AGG 0.584634 4_4:+47445261 Msa0684140:CDS
GTATGAGAAAAGGAAAATGT+GGG 0.585286 4_4:+47446502 Msa0684140:CDS
TCGATGTCATCTGATGCTAA+AGG 0.586531 4_4:+47445909 Msa0684140:CDS
GATGAGTTAACACACGAGAA+TGG 0.588219 4_4:+47444931 Msa0684140:CDS
ATACGGTTGATGCGGAAGGT+AGG 0.588882 4_4:+47445988 Msa0684140:CDS
TCGATGTAATCACGCATCGT+TGG 0.589562 4_4:+47445649 Msa0684140:CDS
TATGAATTTGCAAGCCATTG+TGG 0.589617 4_4:+47448666 Msa0684140:CDS
GAATGGAAATTCTGATTCAG+AGG 0.594942 4_4:+47445224 Msa0684140:CDS
CCGGTAGCTGTAATTACAGA+TGG 0.595736 4_4:+47446251 Msa0684140:CDS
GATAATTGACAATGAAGGAA+AGG 0.596597 4_4:+47448498 Msa0684140:CDS
TCACATACGGTTGATGCGGA+AGG 0.596764 4_4:+47445984 Msa0684140:CDS
AAGCCTGTTGAGTACTGCAT+AGG 0.597154 4_4:+47449023 Msa0684140:CDS
TGGGCAACAAGTCATATTCG+AGG 0.597756 4_4:+47446521 Msa0684140:CDS
CAGATGGCGATCTAGCTATG+AGG 0.599944 4_4:+47446267 Msa0684140:CDS
TGGTGGTGGTAACATAGTTG+GGG 0.601559 4_4:+47444951 Msa0684140:CDS
CCAATCTTAGGTCGCTTGAG+AGG 0.601635 4_4:+47446732 Msa0684140:CDS
GATAATGTTGGTGACGGTGA+CGG 0.603034 4_4:+47444979 Msa0684140:CDS
TGCTGCTGGTGGGTATGATA+AGG 0.603427 4_4:+47445836 Msa0684140:CDS
ACTTCAAATATATTGTCTGA+AGG 0.603965 4_4:+47448373 Msa0684140:CDS
AAACCAACCTGTTTGGTGCG+GGG 0.604291 4_4:-47447426 None:intergenic
GAACATGAAGATTCAATGGT+GGG 0.604988 4_4:-47449118 None:intergenic
GCGTTTGCAAATGCTGCTGG+TGG 0.605014 4_4:+47445825 Msa0684140:CDS
GTGTCCACGGCTATATCTGA+AGG 0.605490 4_4:+47448769 Msa0684140:CDS
TGTCTCATGTTCATCCACAA+TGG 0.606870 4_4:-47448680 None:intergenic
TATTGTAGCACTTCCCACAA+TGG 0.607933 4_4:+47448901 Msa0684140:intron
GAAAACCAACCTGTTTGGTG+CGG 0.608116 4_4:-47447428 None:intergenic
GTTATCATAGGTTATGTGCA+TGG 0.608973 4_4:+47446318 Msa0684140:CDS
GAAGGGGATAATGTTGGTGA+CGG 0.619105 4_4:+47444973 Msa0684140:CDS
GATGTGAATGAAGATGATTA+TGG 0.619504 4_4:+47445171 Msa0684140:CDS
CAATTGGCAATGAACACAGA+TGG 0.620135 4_4:-47448280 None:intergenic
ATGGTTTCAACATGTGTCCA+CGG 0.620662 4_4:+47448756 Msa0684140:CDS
TGTTGAGTGACAAACATTGT+GGG 0.620764 4_4:+47445709 Msa0684140:CDS
TGTTTCACATACGGTTGATG+CGG 0.624870 4_4:+47445980 Msa0684140:CDS
TTAACACACGAGAATGGTGG+TGG 0.625361 4_4:+47444937 Msa0684140:CDS
CGTTTGCAAATGCTGCTGGT+GGG 0.625869 4_4:+47445826 Msa0684140:CDS
ATTGTTTGAAAGGATGATGG+AGG 0.625998 4_4:-47448138 None:intergenic
TCATTCTTGATTATCAGCCA+CGG 0.631002 4_4:+47448455 Msa0684140:CDS
CGAACATGAAGATTCAATGG+TGG 0.634197 4_4:-47449119 None:intergenic
CAGGGATAAGAACAACATCA+AGG 0.636558 4_4:+47446555 Msa0684140:CDS
AATGGAAATTCTGATTCAGA+GGG 0.636700 4_4:+47445225 Msa0684140:CDS
GTTGGTGACGGTGACGGTGA+AGG 0.638314 4_4:+47444985 Msa0684140:CDS
GTACTCAACAGGCTTCCTTG+TGG 0.638893 4_4:-47449015 None:intergenic
AGACAGAGGTCTAACAGCAG+AGG 0.646457 4_4:+47445563 Msa0684140:CDS
CTGACCAAACCAACATACAT+CGG 0.647498 4_4:-47448598 None:intergenic
CAAGATGCACAAAACCTGCA+AGG 0.649116 4_4:-47447979 None:intergenic
ATGTTGAGTGACAAACATTG+TGG 0.650930 4_4:+47445708 Msa0684140:CDS
AACAATAACAATGATACCCG+AGG 0.656179 4_4:-47447788 None:intergenic
ATCTCAAAGAAATTATCACA+GGG 0.663461 4_4:-47448346 None:intergenic
GCTGGTGGGTATGATAAGGT+AGG 0.665604 4_4:+47445840 Msa0684140:CDS
GGTGACGGTGACGGTGAAGG+AGG 0.669024 4_4:+47444988 Msa0684140:CDS
TGCAATGAAAGGTAAGACAC+CGG 0.669695 4_4:+47446232 Msa0684140:CDS
AAGAACAACATCAAGGTGTG+AGG 0.673503 4_4:+47446562 Msa0684140:CDS
ACAGCAGAGGAACGTAAGCG+TGG 0.677347 4_4:+47445576 Msa0684140:CDS
GCAATGTCAAAAGGTCCACA+AGG 0.677788 4_4:+47449000 Msa0684140:CDS
CATCATGATAAGCATTCCTG+AGG 0.680318 4_4:-47449145 None:intergenic
TTTGCCTTCAGATATAGCCG+TGG 0.681786 4_4:-47448773 None:intergenic
GAAGGGTTCAGGAAAGACAG+AGG 0.686044 4_4:+47445549 Msa0684140:CDS
CTTTCAAACAATAATCACAC+CGG 0.689806 4_4:+47448149 Msa0684140:CDS
GAGTTAACACACGAGAATGG+TGG 0.694624 4_4:+47444934 Msa0684140:CDS
AGGTTGAAGGGACGTACGTG+TGG 0.703584 4_4:+47446189 Msa0684140:CDS
AACCTCATTTGAAACAACAG+CGG 0.707858 4_4:-47446171 None:intergenic
ACAAGCACAACAGCAGCCAG+GGG 0.707869 4_4:-47444568 None:intergenic
CCAGTACATGAAACCCGTTG+CGG 0.717976 4_4:+47445600 Msa0684140:CDS
GATGCACAAAACCTGCAAGG+AGG 0.738488 4_4:-47447976 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCATATATTAAAAGTAA+AGG + chr4_4:47444126-47444145 Msa0684140:intron 10.0%
!!! GTGATTATTTTTTTTTTTAA+CGG - chr4_4:47444675-47444694 None:intergenic 10.0%
!!! AATACAACAATTTTATTTTT+AGG + chr4_4:47448082-47448101 Msa0684140:intron 10.0%
!!! ATGTATATTTTTCGAAAATT+CGG + chr4_4:47444325-47444344 Msa0684140:intron 15.0%
!! TAGAAATTGTATAAATTTGA+TGG + chr4_4:47444729-47444748 Msa0684140:intron 15.0%
!! CAAGTTATTAAAAATAAGAA+TGG + chr4_4:47445492-47445511 Msa0684140:CDS 15.0%
!! ATATTTATTCTTCTTATATG+TGG - chr4_4:47446090-47446109 None:intergenic 15.0%
!! CATATAAGAAGAATAAATAT+AGG + chr4_4:47446090-47446109 Msa0684140:CDS 15.0%
!! ACAATTGTTAATTAACATAA+TGG - chr4_4:47447323-47447342 None:intergenic 15.0%
!! AAAGTAATTTGATATTTGAT+GGG - chr4_4:47447533-47447552 None:intergenic 15.0%
!!! AAATCAAATTTTACTTAATC+CGG + chr4_4:47447609-47447628 Msa0684140:intron 15.0%
!! TTGAATAAGCAAATATTATT+AGG - chr4_4:47448016-47448035 None:intergenic 15.0%
!! GCAAAAAATTTATATCAAAA+GGG + chr4_4:47448629-47448648 Msa0684140:CDS 15.0%
!! TTAAAAGTAAAGGTCAAATT+CGG + chr4_4:47444136-47444155 Msa0684140:intron 20.0%
!!! GAATTTTCGAAAAATATACA+TGG - chr4_4:47444326-47444345 None:intergenic 20.0%
!!! CATGTATAGCTTAATTTTTT+TGG + chr4_4:47444491-47444510 Msa0684140:intron 20.0%
!!! TTGTATAAATTTGATGGTAA+AGG + chr4_4:47444735-47444754 Msa0684140:CDS 20.0%
!! AAACCAACAATAAAAATTGT+AGG - chr4_4:47445439-47445458 None:intergenic 20.0%
!! AAGATTCAAATTAAGTACTT+TGG + chr4_4:47445768-47445787 Msa0684140:CDS 20.0%
!!! CAAAAGAATTTTGAAGTTTT+TGG + chr4_4:47446044-47446063 Msa0684140:CDS 20.0%
!! TTAATGAATTGTATGAGAAA+AGG + chr4_4:47446492-47446511 Msa0684140:CDS 20.0%
!! TTATTATACATAAGTTCTTC+TGG + chr4_4:47447202-47447221 Msa0684140:intron 20.0%
!! TTAGACAATGTAAAACTTAA+GGG - chr4_4:47447232-47447251 None:intergenic 20.0%
!! ATTAGACAATGTAAAACTTA+AGG - chr4_4:47447233-47447252 None:intergenic 20.0%
!! TCAATCAATAAAGATTGAAT+TGG - chr4_4:47447453-47447472 None:intergenic 20.0%
!! AACAATAAGAATTGACAAAT+AGG - chr4_4:47447480-47447499 None:intergenic 20.0%
!! GAAAGTAATTTGATATTTGA+TGG - chr4_4:47447534-47447553 None:intergenic 20.0%
!! TAAAATTAGAACTAACGTAA+AGG - chr4_4:47447581-47447600 None:intergenic 20.0%
!!! CATAGATTTTACAATAATCA+TGG - chr4_4:47448190-47448209 None:intergenic 20.0%
!! TTAATTGCATGATAGTTAAT+AGG - chr4_4:47448550-47448569 None:intergenic 20.0%
!! GGCAAAAAATTTATATCAAA+AGG + chr4_4:47448628-47448647 Msa0684140:CDS 20.0%
!!! ATTTGAAATGATGTTCAATA+TGG - chr4_4:47448738-47448757 None:intergenic 20.0%
!! ATATTGAACATCATTTCAAA+TGG + chr4_4:47448737-47448756 Msa0684140:CDS 20.0%
!!! TTAAATTAAAGGATTTTACC+AGG - chr4_4:47448804-47448823 None:intergenic 20.0%
!! AATTTCTTGCATTTAAGAAA+TGG - chr4_4:47448840-47448859 None:intergenic 20.0%
!! TAATATGATTCTAATGAATG+AGG + chr4_4:47448956-47448975 Msa0684140:CDS 20.0%
! TAAATTAAATCTCTCACCAT+AGG - chr4_4:47444007-47444026 None:intergenic 25.0%
!!! TGGTTTTTTGTTTTTGATGT+TGG + chr4_4:47444029-47444048 Msa0684140:intron 25.0%
! TAATGATAATTACCCACTAT+AGG - chr4_4:47444097-47444116 None:intergenic 25.0%
! ACTTCTGTCAAGATTTAATT+TGG - chr4_4:47444178-47444197 None:intergenic 25.0%
! CAAGAAAAAATGCTTATTAG+TGG - chr4_4:47444218-47444237 None:intergenic 25.0%
!! AGATTGAGAAATTTTAGATC+TGG + chr4_4:47444268-47444287 Msa0684140:intron 25.0%
!! TAGCATTTATTCACTGTTTT+TGG + chr4_4:47444397-47444416 Msa0684140:intron 25.0%
!!! TGTTTTTTTTTAGCAAGCAA+TGG + chr4_4:47444909-47444928 Msa0684140:intron 25.0%
!! TTGCCTACAATTTTTATTGT+TGG + chr4_4:47445433-47445452 Msa0684140:CDS 25.0%
!!! ACATTTTTTTGCAATCTAGA+AGG + chr4_4:47445531-47445550 Msa0684140:CDS 25.0%
!!! CATTTTTTTGCAATCTAGAA+GGG + chr4_4:47445532-47445551 Msa0684140:CDS 25.0%
! ATTGATGTTTGTTTCACATA+CGG + chr4_4:47445971-47445990 Msa0684140:CDS 25.0%
!! TTTTTCCAAAGAGTTATCAT+AGG + chr4_4:47446306-47446325 Msa0684140:CDS 25.0%
!!! GCATACATCTTTTGAAAAAA+GGG - chr4_4:47446391-47446410 None:intergenic 25.0%
!!! AGCATACATCTTTTGAAAAA+AGG - chr4_4:47446392-47446411 None:intergenic 25.0%
!!! TTTTTCAAAAGATGTATGCT+TGG + chr4_4:47446392-47446411 Msa0684140:CDS 25.0%
!!! ATGAAAGTGCTTAACAAAAT+CGG - chr4_4:47446636-47446655 None:intergenic 25.0%
!! ATTTTGTTAAGCACTTTCAT+AGG + chr4_4:47446636-47446655 Msa0684140:CDS 25.0%
!!! TACCAAAGAAATTTTTGAGA+TGG + chr4_4:47446772-47446791 Msa0684140:CDS 25.0%
! TACCATCTCAAAAATTTCTT+TGG - chr4_4:47446777-47446796 None:intergenic 25.0%
!! TGTAGAACAAGACATATTTT+GGG - chr4_4:47446843-47446862 None:intergenic 25.0%
!! TTGTAGAACAAGACATATTT+TGG - chr4_4:47446844-47446863 None:intergenic 25.0%
! ATGTTATATATAGTGCCAAA+GGG - chr4_4:47447030-47447049 None:intergenic 25.0%
! TTTGGCACTATATATAACAT+CGG + chr4_4:47447030-47447049 Msa0684140:intron 25.0%
! TAAGCAAATATTATTAGGCT+AGG - chr4_4:47448011-47448030 None:intergenic 25.0%
! ATTATTGTTTGAAAGGATGA+TGG - chr4_4:47448144-47448163 None:intergenic 25.0%
! TTTATTCCAATTACATCCTA+TGG + chr4_4:47448215-47448234 Msa0684140:intron 25.0%
! AAATTACCATAGGATGTAAT+TGG - chr4_4:47448224-47448243 None:intergenic 25.0%
! ATCTCAAAGAAATTATCACA+GGG - chr4_4:47448349-47448368 None:intergenic 25.0%
! AATCTCAAAGAAATTATCAC+AGG - chr4_4:47448350-47448369 None:intergenic 25.0%
! ACTTCAAATATATTGTCTGA+AGG + chr4_4:47448373-47448392 Msa0684140:CDS 25.0%
! ATGTTAAAAACATTAAACCG+TGG - chr4_4:47448475-47448494 None:intergenic 25.0%
!!! GGTTTAATGTTTTTAACATG+CGG + chr4_4:47448476-47448495 Msa0684140:CDS 25.0%
! TAACTATCATGCAATTAAAC+TGG + chr4_4:47448552-47448571 Msa0684140:CDS 25.0%
! TTGCAAATTCATATGTTTCA+TGG - chr4_4:47448659-47448678 None:intergenic 25.0%
! GGTGAGAGATTTAATTTAAC+TGG + chr4_4:47444009-47444028 Msa0684140:intron 30.0%
TATCAAAGCGATTTATCTCT+TGG + chr4_4:47444298-47444317 Msa0684140:intron 30.0%
!!! ACTGTTTTTGGATCTACTTT+GGG + chr4_4:47444409-47444428 Msa0684140:intron 30.0%
!! TGTAGCAGGTTTTTGTTTAT+TGG + chr4_4:47444449-47444468 Msa0684140:intron 30.0%
!! CAGGTTTTTGTTTATTGGTT+TGG + chr4_4:47444454-47444473 Msa0684140:intron 30.0%
!! TGTTTATTGGTTTGGCTTTA+AGG + chr4_4:47444462-47444481 Msa0684140:intron 30.0%
!! GTTTATTGGTTTGGCTTTAA+GGG + chr4_4:47444463-47444482 Msa0684140:intron 30.0%
AGGAAAAAAATACAGCCAAA+GGG - chr4_4:47444542-47444561 None:intergenic 30.0%
ACGGCACATTTATATATAAG+AGG - chr4_4:47444656-47444675 None:intergenic 30.0%
! TGATGGTAAAGGTATATGTA+CGG + chr4_4:47444746-47444765 Msa0684140:CDS 30.0%
TACAATGATGTAGATGATTC+CGG + chr4_4:47445060-47445079 Msa0684140:CDS 30.0%
ATCATCATCATTCATATCAC+CGG - chr4_4:47445145-47445164 None:intergenic 30.0%
GATGTGAATGAAGATGATTA+TGG + chr4_4:47445171-47445190 Msa0684140:CDS 30.0%
GATTTGAATGAAGATGATTC+TGG + chr4_4:47445195-47445214 Msa0684140:CDS 30.0%
AATGGAAATTCTGATTCAGA+GGG + chr4_4:47445225-47445244 Msa0684140:CDS 30.0%
!! TGAAAATGTTGATGACGATT+TGG + chr4_4:47445257-47445276 Msa0684140:CDS 30.0%
!!! GAAGAGTCGTTTTTAATAGA+TGG + chr4_4:47445330-47445349 Msa0684140:CDS 30.0%
ATGTTGCAAAGTTGCAATTT+GGG + chr4_4:47445400-47445419 Msa0684140:CDS 30.0%
CATTTCATGATTGTGATCAA+AGG - chr4_4:47445691-47445710 None:intergenic 30.0%
!! ATTAAGTACTTTGGTAATGC+TGG + chr4_4:47445777-47445796 Msa0684140:CDS 30.0%
! ATCAAAGTTGGTCAAATGAT+TGG + chr4_4:47445801-47445820 Msa0684140:CDS 30.0%
GTATGTGAAACAAACATCAA+TGG - chr4_4:47445972-47445991 None:intergenic 30.0%
TTGTTTCAAATGAGGTTGAA+GGG + chr4_4:47446177-47446196 Msa0684140:CDS 30.0%
CATAACCTATGATAACTCTT+TGG - chr4_4:47446314-47446333 None:intergenic 30.0%
GAAATCAAGATTACCAATGT+TGG - chr4_4:47446366-47446385 None:intergenic 30.0%
TCTGGAAATTTGAAGAACTT+TGG + chr4_4:47446426-47446445 Msa0684140:CDS 30.0%
!! TGAAGAACTTTGGAATGAAA+TGG + chr4_4:47446436-47446455 Msa0684140:CDS 30.0%
! TTTGGAATGAAATGGTTGAA+AGG + chr4_4:47446444-47446463 Msa0684140:CDS 30.0%
AATGAAATGGTTGAAAGGTT+TGG + chr4_4:47446449-47446468 Msa0684140:CDS 30.0%
!!! TTGGTTTTGAAGAAAACAGA+TGG + chr4_4:47446468-47446487 Msa0684140:CDS 30.0%
TGTATGAGAAAAGGAAAATG+TGG + chr4_4:47446501-47446520 Msa0684140:CDS 30.0%
GTATGAGAAAAGGAAAATGT+GGG + chr4_4:47446502-47446521 Msa0684140:CDS 30.0%
!!! TGCATATTTTCGCTTTAAAG+AGG + chr4_4:47446664-47446683 Msa0684140:CDS 30.0%
! TTCTTTGGTAAACTGTTTTG+AGG - chr4_4:47446762-47446781 None:intergenic 30.0%
GGTGTCTAATAAAGATACTA+GGG - chr4_4:47446822-47446841 None:intergenic 30.0%
! GTCAATATTTTCTTTCCCTT+TGG + chr4_4:47447012-47447031 Msa0684140:intron 30.0%
GATGTTATATATAGTGCCAA+AGG - chr4_4:47447031-47447050 None:intergenic 30.0%
TTTCAGATGAAATTGACCAA+GGG - chr4_4:47447075-47447094 None:intergenic 30.0%
! TTTTCAGATGAAATTGACCA+AGG - chr4_4:47447076-47447095 None:intergenic 30.0%
!! GATGTATAAAGCGTTTTTGT+AGG - chr4_4:47447149-47447168 None:intergenic 30.0%
AATATACTTACAGAGCTAAC+TGG - chr4_4:47447296-47447315 None:intergenic 30.0%
! TATCATTGTTATTGTTAGGC+CGG + chr4_4:47447795-47447814 Msa0684140:CDS 30.0%
!!! TTTTGTTTGGCAGTTTTAGA+TGG + chr4_4:47447847-47447866 Msa0684140:intron 30.0%
!! ATTTTTAGGAACTTTGATGC+TGG + chr4_4:47448096-47448115 Msa0684140:intron 30.0%
CTTTCAAACAATAATCACAC+CGG + chr4_4:47448149-47448168 Msa0684140:CDS 30.0%
TAATCATGGAATAAAAGACC+TGG - chr4_4:47448176-47448195 None:intergenic 30.0%
!!! GGATATTTTTGGTTCAATCA+AGG + chr4_4:47448321-47448340 Msa0684140:CDS 30.0%
TAATCAAGAATGACTCTTTG+CGG - chr4_4:47448448-47448467 None:intergenic 30.0%
GATAATTGACAATGAAGGAA+AGG + chr4_4:47448498-47448517 Msa0684140:CDS 30.0%
AGGATGACAGGTTAAATTAA+AGG - chr4_4:47448815-47448834 None:intergenic 30.0%
TAAATCTCTCAAACTCAATC+TGG + chr4_4:47449067-47449086 Msa0684140:CDS 30.0%
! TATAACTTGCAAGTGTAGGT+TGG + chr4_4:47444054-47444073 Msa0684140:intron 35.0%
TTTGTGTTACCTCCTATAGT+GGG + chr4_4:47444082-47444101 Msa0684140:intron 35.0%
TGATAATTACCCACTATAGG+AGG - chr4_4:47444094-47444113 None:intergenic 35.0%
TTCTGTTGAATGAATCACAG+AGG + chr4_4:47444358-47444377 Msa0684140:intron 35.0%
!!! CACTGTTTTTGGATCTACTT+TGG + chr4_4:47444408-47444427 Msa0684140:intron 35.0%
!! TTTTGGATCTACTTTGGGTT+TGG + chr4_4:47444414-47444433 Msa0684140:intron 35.0%
CAGGAAAAAAATACAGCCAA+AGG - chr4_4:47444543-47444562 None:intergenic 35.0%
GGTATATGTACGGATTCAAA+TGG + chr4_4:47444756-47444775 Msa0684140:CDS 35.0%
ATCATCTTCATTCACATCAC+CGG - chr4_4:47445082-47445101 None:intergenic 35.0%
GATGTGAATGAAGATGATTC+TGG + chr4_4:47445084-47445103 Msa0684140:CDS 35.0%
ATCATCTTCATTCACATCAC+TGG - chr4_4:47445082-47445101 None:intergenic 35.0%
GAATGGAAATTCTGATTCAG+AGG + chr4_4:47445224-47445243 Msa0684140:CDS 35.0%
!! AATGTTGATGACGATTTGGA+AGG + chr4_4:47445261-47445280 Msa0684140:CDS 35.0%
AAAAACGACTCTTCTAGACT+TGG - chr4_4:47445324-47445343 None:intergenic 35.0%
GATGTTGCAAAGTTGCAATT+TGG + chr4_4:47445399-47445418 Msa0684140:CDS 35.0%
AAAAATTGTAGGCAACTTCC+AGG - chr4_4:47445428-47445447 None:intergenic 35.0%
!! TGTTGGTTTGCAAAGATGAA+CGG + chr4_4:47445450-47445469 Msa0684140:CDS 35.0%
ATGTTGAGTGACAAACATTG+TGG + chr4_4:47445708-47445727 Msa0684140:CDS 35.0%
TGTTGAGTGACAAACATTGT+GGG + chr4_4:47445709-47445728 Msa0684140:CDS 35.0%
! TAAGGTAGGATTTCTGAAGA+AGG + chr4_4:47445854-47445873 Msa0684140:CDS 35.0%
CAAATATAATCGTCTGGTTG+TGG - chr4_4:47446148-47446167 None:intergenic 35.0%
CACAACCAGACGATTATATT+TGG + chr4_4:47446146-47446165 Msa0684140:CDS 35.0%
! AACCTCATTTGAAACAACAG+CGG - chr4_4:47446174-47446193 None:intergenic 35.0%
! GTTGTTTCAAATGAGGTTGA+AGG + chr4_4:47446176-47446195 Msa0684140:CDS 35.0%
! CAGTTATTGGTTGCAATGAA+AGG + chr4_4:47446221-47446240 Msa0684140:CDS 35.0%
GTTATCATAGGTTATGTGCA+TGG + chr4_4:47446318-47446337 Msa0684140:CDS 35.0%
ATTCGAGGAAATTTCTTTGC+AGG + chr4_4:47446536-47446555 Msa0684140:CDS 35.0%
TTCGAGGAAATTTCTTTGCA+GGG + chr4_4:47446537-47446556 Msa0684140:CDS 35.0%
! AAGATACTAGGGATACCTTT+TGG - chr4_4:47446811-47446830 None:intergenic 35.0%
GGGTGTCTAATAAAGATACT+AGG - chr4_4:47446823-47446842 None:intergenic 35.0%
!! TTGACAAAGTATCGAGATGA+AGG + chr4_4:47446872-47446891 Msa0684140:intron 35.0%
CATGCAAATTGATTGTCCAA+TGG - chr4_4:47446923-47446942 None:intergenic 35.0%
! CTTAGAGGTGTGGATATATT+GGG - chr4_4:47446973-47446992 None:intergenic 35.0%
ATGAAATTGACCAAGGGAAA+GGG - chr4_4:47447069-47447088 None:intergenic 35.0%
AACTTCCACCAATTGAACAA+TGG + chr4_4:47447097-47447116 Msa0684140:intron 35.0%
! TTTTGTAGGAAAGACAAACC+TGG - chr4_4:47447135-47447154 None:intergenic 35.0%
!! TACACTGATTCACTCTTACA+TGG + chr4_4:47447351-47447370 Msa0684140:intron 35.0%
!! ACACTGATTCACTCTTACAT+GGG + chr4_4:47447352-47447371 Msa0684140:intron 35.0%
TTGAACTCAGATACCCAATT+TGG + chr4_4:47447386-47447405 Msa0684140:intron 35.0%
TGAACTCAGATACCCAATTT+GGG + chr4_4:47447387-47447406 Msa0684140:intron 35.0%
!! TGGTTGATTTGTCCCAAATT+GGG - chr4_4:47447402-47447421 None:intergenic 35.0%
AATTGGAAAACCAACCTGTT+TGG - chr4_4:47447436-47447455 None:intergenic 35.0%
CACCACTCATAAAACAAACA+CGG - chr4_4:47447635-47447654 None:intergenic 35.0%
!!! TTTGTTTTATGAGTGGTGCT+GGG + chr4_4:47447637-47447656 Msa0684140:intron 35.0%
!! TTTTGTTTGTTCTGTTGCCT+CGG + chr4_4:47447771-47447790 Msa0684140:CDS 35.0%
AACAATAACAATGATACCCG+AGG - chr4_4:47447791-47447810 None:intergenic 35.0%
! CGGGTATCATTGTTATTGTT+AGG + chr4_4:47447791-47447810 Msa0684140:CDS 35.0%
! TTTTGATCGAGTTTGGTTGT+AGG + chr4_4:47447915-47447934 Msa0684140:intron 35.0%
! ATTGTTTGAAAGGATGATGG+AGG - chr4_4:47448141-47448160 None:intergenic 35.0%
CGGTGTGATTATTGTTTGAA+AGG - chr4_4:47448151-47448170 None:intergenic 35.0%
! AGGATTCGGTAAATTACCAT+AGG - chr4_4:47448234-47448253 None:intergenic 35.0%
CCAATTGGAAGTTTCAACTT+GGG + chr4_4:47448296-47448315 Msa0684140:CDS 35.0%
CAATTGGAAGTTTCAACTTG+GGG + chr4_4:47448297-47448316 Msa0684140:CDS 35.0%
GACATTATTGCAACCTATTG+TGG + chr4_4:47448412-47448431 Msa0684140:CDS 35.0%
TCATTCTTGATTATCAGCCA+CGG + chr4_4:47448455-47448474 Msa0684140:CDS 35.0%
ATGCGGATAATTGACAATGA+AGG + chr4_4:47448493-47448512 Msa0684140:CDS 35.0%
GACTGTGAATTCCAAAGTAA+GGG - chr4_4:47448528-47448547 None:intergenic 35.0%
! ATCGGATTGACATGTTTTGT+AGG - chr4_4:47448583-47448602 None:intergenic 35.0%
TATGAATTTGCAAGCCATTG+TGG + chr4_4:47448666-47448685 Msa0684140:CDS 35.0%
AGAGCAACCAGAAGAAAATT+CGG + chr4_4:47448702-47448721 Msa0684140:CDS 35.0%
! TGATCATCCGAATTTTCTTC+TGG - chr4_4:47448712-47448731 None:intergenic 35.0%
CTTGCATTTAAGAAATGGCA+AGG - chr4_4:47448835-47448854 None:intergenic 35.0%
GAATGCAATGCAATGTCAAA+AGG + chr4_4:47448991-47449010 Msa0684140:CDS 35.0%
! TGATCAGCTGTATTTTCTTC+TGG + chr4_4:47449091-47449110 Msa0684140:CDS 35.0%
GAACATGAAGATTCAATGGT+GGG - chr4_4:47449121-47449140 None:intergenic 35.0%
ACTCGAACATGAAGATTCAA+TGG - chr4_4:47449125-47449144 None:intergenic 35.0%
! GGCATATAACTTGCAAGTGT+AGG + chr4_4:47444050-47444069 Msa0684140:intron 40.0%
GTTTGTGTTACCTCCTATAG+TGG + chr4_4:47444081-47444100 Msa0684140:intron 40.0%
! CTTGACAGAAGTGTAGAACA+CGG + chr4_4:47444234-47444253 Msa0684140:intron 40.0%
!! TATTGGTTTGGCTTTAAGGG+AGG + chr4_4:47444466-47444485 Msa0684140:intron 40.0%
!! ATTGGTTTGGCTTTAAGGGA+GGG + chr4_4:47444467-47444486 Msa0684140:intron 40.0%
AAAATACAGCCAAAGGGAAG+TGG - chr4_4:47444536-47444555 None:intergenic 40.0%
!!! GGCTGTATTTTTTTCCTGCT+AGG + chr4_4:47444545-47444564 Msa0684140:intron 40.0%
TGTGCTTGTTTATGGTTAGC+AGG + chr4_4:47444582-47444601 Msa0684140:CDS 40.0%
GTGCTTGTTTATGGTTAGCA+GGG + chr4_4:47444583-47444602 Msa0684140:CDS 40.0%
TGCTTGTTTATGGTTAGCAG+GGG + chr4_4:47444584-47444603 Msa0684140:CDS 40.0%
! GCTTTTTGTGTTGTATCAGC+TGG + chr4_4:47444606-47444625 Msa0684140:CDS 40.0%
GATGAGTTAACACACGAGAA+TGG + chr4_4:47444931-47444950 Msa0684140:CDS 40.0%
!! AATGGTGGTGGTAACATAGT+TGG + chr4_4:47444949-47444968 Msa0684140:CDS 40.0%
!! ATGGTGGTGGTAACATAGTT+GGG + chr4_4:47444950-47444969 Msa0684140:CDS 40.0%
GATTCCAGTGAAGATGATTC+CGG + chr4_4:47445123-47445142 Msa0684140:CDS 40.0%
! GATGATTCTGGTGATGTGAA+TGG + chr4_4:47445096-47445115 Msa0684140:CDS 40.0%
!! AACGGTTTTGCTGTCAGAAA+AGG + chr4_4:47445468-47445487 Msa0684140:CDS 40.0%
TTTGCAATCTAGAAGGGTTC+AGG + chr4_4:47445538-47445557 Msa0684140:CDS 40.0%
GATGCGTGATTACATCGATA+TGG - chr4_4:47445647-47445666 None:intergenic 40.0%
! TGACAAACATTGTGGGTTGT+TGG + chr4_4:47445716-47445735 Msa0684140:CDS 40.0%
GGTAATGCTGGAATCAAAGT+TGG + chr4_4:47445789-47445808 Msa0684140:CDS 40.0%
TCGATGTCATCTGATGCTAA+AGG + chr4_4:47445909-47445928 Msa0684140:CDS 40.0%
! TGTTTCACATACGGTTGATG+CGG + chr4_4:47445980-47445999 Msa0684140:CDS 40.0%
! GTAGGCTGCAACACTTATTT+TGG + chr4_4:47446006-47446025 Msa0684140:CDS 40.0%
!!! CAACACTTATTTTGGAGCGA+CGG + chr4_4:47446014-47446033 Msa0684140:CDS 40.0%
! TGTCCTTTTGTCGTGTTTTC+AGG + chr4_4:47446113-47446132 Msa0684140:CDS 40.0%
ACACCTGAAAACACGACAAA+AGG - chr4_4:47446119-47446138 None:intergenic 40.0%
CGGTACCAAATATAATCGTC+TGG - chr4_4:47446154-47446173 None:intergenic 40.0%
!! TACCGCTGTTGTTTCAAATG+AGG + chr4_4:47446169-47446188 Msa0684140:CDS 40.0%
TGCAATGAAAGGTAAGACAC+CGG + chr4_4:47446232-47446251 Msa0684140:CDS 40.0%
CCATCTGTAATTACAGCTAC+CGG - chr4_4:47446254-47446273 None:intergenic 40.0%
CGAAATGCAATGTCCAACAT+TGG + chr4_4:47446350-47446369 Msa0684140:CDS 40.0%
! TGCTTGGTGATTATGAAGTC+TGG + chr4_4:47446408-47446427 Msa0684140:CDS 40.0%
CAGGGATAAGAACAACATCA+AGG + chr4_4:47446555-47446574 Msa0684140:CDS 40.0%
AAGAACAACATCAAGGTGTG+AGG + chr4_4:47446562-47446581 Msa0684140:CDS 40.0%
GCCGATCTTAATTCCCAATA+CGG + chr4_4:47446692-47446711 Msa0684140:CDS 40.0%
CCCGTATTGGGAATTAAGAT+CGG - chr4_4:47446696-47446715 None:intergenic 40.0%
CCGATCTTAATTCCCAATAC+GGG + chr4_4:47446693-47446712 Msa0684140:CDS 40.0%
! CAGTGTTGAAGACCAATCTT+AGG + chr4_4:47446720-47446739 Msa0684140:CDS 40.0%
! GCTTAGAGGTGTGGATATAT+TGG - chr4_4:47446974-47446993 None:intergenic 40.0%
! ATTGTTTCAGATGGGCTTAG+AGG - chr4_4:47446988-47447007 None:intergenic 40.0%
! TAAGCCCATCTGAAACAATG+CGG + chr4_4:47446989-47447008 Msa0684140:intron 40.0%
CAAGGGAAAGGGATGTTATA+GGG - chr4_4:47447058-47447077 None:intergenic 40.0%
GATGAAATTGACCAAGGGAA+AGG - chr4_4:47447070-47447089 None:intergenic 40.0%
TGTAGCGACCATTGTTCAAT+TGG - chr4_4:47447108-47447127 None:intergenic 40.0%
AATTGAACAATGGTCGCTAC+AGG + chr4_4:47447107-47447126 Msa0684140:intron 40.0%
! TACAGAGCTAACTGGTTCAA+AGG - chr4_4:47447288-47447307 None:intergenic 40.0%
ACTCTTACATGGGTTTCTTG+TGG + chr4_4:47447362-47447381 Msa0684140:intron 40.0%
!! GTGGTTGATTTGTCCCAAAT+TGG - chr4_4:47447403-47447422 None:intergenic 40.0%
ACTCATAAAACAAACACGGC+CGG - chr4_4:47447631-47447650 None:intergenic 40.0%
!!! GTTTGTTTTATGAGTGGTGC+TGG + chr4_4:47447636-47447655 Msa0684140:intron 40.0%
TTTGTTTGTTCTGTTGCCTC+GGG + chr4_4:47447772-47447791 Msa0684140:CDS 40.0%
! ATTGTTATTGTTAGGCCGGT+TGG + chr4_4:47447799-47447818 Msa0684140:intron 40.0%
! TTGTTATTGTTAGGCCGGTT+GGG + chr4_4:47447800-47447819 Msa0684140:intron 40.0%
ACCCCAAAAAAAATCCCAAC+CGG - chr4_4:47447817-47447836 None:intergenic 40.0%
!! GGTCTGCATTCTGTTTTGTT+TGG + chr4_4:47447834-47447853 Msa0684140:intron 40.0%
!! TGGCCTTGTTGTTATCAGTT+CGG + chr4_4:47447867-47447886 Msa0684140:intron 40.0%
!! GTTAGTTTGCGAACTTTAGG+AGG + chr4_4:47447891-47447910 Msa0684140:intron 40.0%
! AGGAGGTTTTTGATCGAGTT+TGG + chr4_4:47447908-47447927 Msa0684140:intron 40.0%
!! GTACAAAAGTGCCAAAAACG+CGG - chr4_4:47447949-47447968 None:intergenic 40.0%
ATGGAATAAAAGACCTGGTC+CGG - chr4_4:47448171-47448190 None:intergenic 40.0%
TACCGAATCCTTTGCATTTC+AGG + chr4_4:47448243-47448262 Msa0684140:intron 40.0%
AGCCTGAAATGCAAAGGATT+CGG - chr4_4:47448248-47448267 None:intergenic 40.0%
AATGTCAGCCTGAAATGCAA+AGG - chr4_4:47448254-47448273 None:intergenic 40.0%
CAATTGGCAATGAACACAGA+TGG - chr4_4:47448283-47448302 None:intergenic 40.0%
CATCTGTGTTCATTGCCAAT+TGG + chr4_4:47448281-47448300 Msa0684140:CDS 40.0%
GCCAATTGGAAGTTTCAACT+TGG + chr4_4:47448295-47448314 Msa0684140:CDS 40.0%
! CCCAAGTTGAAACTTCCAAT+TGG - chr4_4:47448299-47448318 None:intergenic 40.0%
! CAACTTGGGGTGGATATTTT+TGG + chr4_4:47448310-47448329 Msa0684140:CDS 40.0%
TAGGTTGCAATAATGTCTCC+AGG - chr4_4:47448409-47448428 None:intergenic 40.0%
!! CGGTTGATGAAAACCACAAT+AGG - chr4_4:47448428-47448447 None:intergenic 40.0%
GGACTGTGAATTCCAAAGTA+AGG - chr4_4:47448529-47448548 None:intergenic 40.0%
CATGTCAATCCGATGTATGT+TGG + chr4_4:47448589-47448608 Msa0684140:CDS 40.0%
! CAATCCGATGTATGTTGGTT+TGG + chr4_4:47448594-47448613 Msa0684140:CDS 40.0%
CTGACCAAACCAACATACAT+CGG - chr4_4:47448601-47448620 None:intergenic 40.0%
TGTCTCATGTTCATCCACAA+TGG - chr4_4:47448683-47448702 None:intergenic 40.0%
ATGGTTTCAACATGTGTCCA+CGG + chr4_4:47448756-47448775 Msa0684140:CDS 40.0%
TAAGAAATGGCAAGGATGAC+AGG - chr4_4:47448827-47448846 None:intergenic 40.0%
TATTGTAGCACTTCCCACAA+TGG + chr4_4:47448901-47448920 Msa0684140:intron 40.0%
ATCTGATAACCTAGCAGCTT+TGG - chr4_4:47448931-47448950 None:intergenic 40.0%
AATCCTATGCAGTACTCAAC+AGG - chr4_4:47449029-47449048 None:intergenic 40.0%
! GTTGAGTACTGCATAGGATT+AGG + chr4_4:47449029-47449048 Msa0684140:CDS 40.0%
AGTACTGCATAGGATTAGGT+TGG + chr4_4:47449033-47449052 Msa0684140:CDS 40.0%
CGAACATGAAGATTCAATGG+TGG - chr4_4:47449122-47449141 None:intergenic 40.0%
CATCATGATAAGCATTCCTG+AGG - chr4_4:47449148-47449167 None:intergenic 40.0%
!! TTGTTTCTGCCACTTCCCTT+TGG + chr4_4:47444524-47444543 Msa0684140:intron 45.0%
GCTGCTGTTGTGCTTGTTTA+TGG + chr4_4:47444574-47444593 Msa0684140:CDS 45.0%
AATGATGCTCGAGATAGCGT+TGG + chr4_4:47444780-47444799 Msa0684140:CDS 45.0%
ATGATGCTCGAGATAGCGTT+GGG + chr4_4:47444781-47444800 Msa0684140:CDS 45.0%
GAGTTAACACACGAGAATGG+TGG + chr4_4:47444934-47444953 Msa0684140:CDS 45.0%
TTAACACACGAGAATGGTGG+TGG + chr4_4:47444937-47444956 Msa0684140:CDS 45.0%
!! TGGTGGTGGTAACATAGTTG+GGG + chr4_4:47444951-47444970 Msa0684140:CDS 45.0%
GTGGTAACATAGTTGGGGAA+GGG + chr4_4:47444956-47444975 Msa0684140:CDS 45.0%
TGGTAACATAGTTGGGGAAG+GGG + chr4_4:47444957-47444976 Msa0684140:CDS 45.0%
! GAAGGGGATAATGTTGGTGA+CGG + chr4_4:47444973-47444992 Msa0684140:CDS 45.0%
!! GATAATGTTGGTGACGGTGA+CGG + chr4_4:47444979-47444998 Msa0684140:CDS 45.0%
ATCACCGGAATCATCTTCAC+TGG - chr4_4:47445130-47445149 None:intergenic 45.0%
AAAGTTGCAATTTGGGAGCC+TGG + chr4_4:47445407-47445426 Msa0684140:CDS 45.0%
! ATTTTGCTCCACAACCGCAA+CGG - chr4_4:47445617-47445636 None:intergenic 45.0%
TCGATGTAATCACGCATCGT+TGG + chr4_4:47445649-47445668 Msa0684140:CDS 45.0%
!! CTGATGCTAAAGGTGCTGTT+AGG + chr4_4:47445919-47445938 Msa0684140:CDS 45.0%
GTGGTTGTTGGAGCAGTTAT+TGG + chr4_4:47446208-47446227 Msa0684140:CDS 45.0%
CCGGTAGCTGTAATTACAGA+TGG + chr4_4:47446251-47446270 Msa0684140:CDS 45.0%
TGGGCAACAAGTCATATTCG+AGG + chr4_4:47446521-47446540 Msa0684140:CDS 45.0%
GGTACGATCTGTCATCCAAA+AGG + chr4_4:47446793-47446812 Msa0684140:CDS 45.0%
ATCGAGATGAAGGTCATGTC+TGG + chr4_4:47446882-47446901 Msa0684140:intron 45.0%
! AAGCCCATCTGAAACAATGC+GGG + chr4_4:47446990-47447009 Msa0684140:intron 45.0%
TGACCCGCATTGTTTCAGAT+GGG - chr4_4:47446996-47447015 None:intergenic 45.0%
TTGACCCGCATTGTTTCAGA+TGG - chr4_4:47446997-47447016 None:intergenic 45.0%
CCAAGGGAAAGGGATGTTAT+AGG - chr4_4:47447059-47447078 None:intergenic 45.0%
CCTATAACATCCCTTTCCCT+TGG + chr4_4:47447056-47447075 Msa0684140:intron 45.0%
AGCGACCATTGTTCAATTGG+TGG - chr4_4:47447105-47447124 None:intergenic 45.0%
!! AAAACCAACCTGTTTGGTGC+GGG - chr4_4:47447430-47447449 None:intergenic 45.0%
! GAAAACCAACCTGTTTGGTG+CGG - chr4_4:47447431-47447450 None:intergenic 45.0%
!!! GGCCGTGTTTGTTTTATGAG+TGG + chr4_4:47447630-47447649 Msa0684140:intron 45.0%
AGCTGTTGTGAGTTTGTGTG+TGG + chr4_4:47447702-47447721 Msa0684140:intron 45.0%
GCTGTTGTGAGTTTGTGTGT+GGG + chr4_4:47447703-47447722 Msa0684140:intron 45.0%
TGTGTGTGGGTTTGTATCTG+CGG + chr4_4:47447716-47447735 Msa0684140:intron 45.0%
! TGGGTTTGTATCTGCGGTTT+TGG + chr4_4:47447722-47447741 Msa0684140:intron 45.0%
!!! AGGCCGGTTGGGATTTTTTT+TGG + chr4_4:47447811-47447830 Msa0684140:intron 45.0%
!!! GGCCGGTTGGGATTTTTTTT+GGG + chr4_4:47447812-47447831 Msa0684140:intron 45.0%
!!! GCCGGTTGGGATTTTTTTTG+GGG + chr4_4:47447813-47447832 Msa0684140:intron 45.0%
ACGCCGAACTGATAACAACA+AGG - chr4_4:47447873-47447892 None:intergenic 45.0%
!! GGCGTTAGTTTGCGAACTTT+AGG + chr4_4:47447888-47447907 Msa0684140:intron 45.0%
GAGTTTGGTTGTAGGTGAAG+TGG + chr4_4:47447923-47447942 Msa0684140:intron 45.0%
! GTACTCTTTTTCCTCCTTGC+AGG + chr4_4:47447965-47447984 Msa0684140:CDS 45.0%
CAAGATGCACAAAACCTGCA+AGG - chr4_4:47447982-47448001 None:intergenic 45.0%
AGGAACTTTGATGCTGGTGA+AGG + chr4_4:47448102-47448121 Msa0684140:intron 45.0%
AACAATAATCACACCGGACC+AGG + chr4_4:47448155-47448174 Msa0684140:CDS 45.0%
TTGGAAGTTTCAACTTGGGG+TGG + chr4_4:47448300-47448319 Msa0684140:CDS 45.0%
!! TCTGAAGGTGTTATTCGACC+TGG + chr4_4:47448388-47448407 Msa0684140:CDS 45.0%
GGAAAGGACATCCCTTACTT+TGG + chr4_4:47448514-47448533 Msa0684140:CDS 45.0%
!! CGATGTATGTTGGTTTGGTC+AGG + chr4_4:47448599-47448618 Msa0684140:CDS 45.0%
!! GTTGGTTTGGTCAGGAAGAA+TGG + chr4_4:47448607-47448626 Msa0684140:CDS 45.0%
TTTGCCTTCAGATATAGCCG+TGG - chr4_4:47448776-47448795 None:intergenic 45.0%
ATCTGAAGGCAAATCTGTCC+TGG + chr4_4:47448783-47448802 Msa0684140:CDS 45.0%
! CAGCTTTGGCAATCCATTGT+GGG - chr4_4:47448917-47448936 None:intergenic 45.0%
!! AATGGATTGCCAAAGCTGCT+AGG + chr4_4:47448919-47448938 Msa0684140:CDS 45.0%
AGCTGCTAGGTTATCAGATG+TGG + chr4_4:47448932-47448951 Msa0684140:CDS 45.0%
GCAATGTCAAAAGGTCCACA+AGG + chr4_4:47449000-47449019 Msa0684140:CDS 45.0%
! AAGCCTGTTGAGTACTGCAT+AGG + chr4_4:47449023-47449042 Msa0684140:CDS 45.0%
ATCTTCATGTTCGAGTCCTC+AGG + chr4_4:47449129-47449148 Msa0684140:CDS 45.0%
!! AATAATAATAGAAAAAAAAA+AGG - chr4_4:47444872-47444891 None:intergenic 5.0%
! GACAGAAGTGTAGAACACGG+CGG + chr4_4:47444237-47444256 Msa0684140:intron 50.0%
!!! TTTTTTTCCTGCTAGGCCCC+TGG + chr4_4:47444552-47444571 Msa0684140:intron 50.0%
AACAAGCACAACAGCAGCCA+GGG - chr4_4:47444572-47444591 None:intergenic 50.0%
AAACAAGCACAACAGCAGCC+AGG - chr4_4:47444573-47444592 None:intergenic 50.0%
CAAGCACCACAGGTGCAAAA+AGG - chr4_4:47444632-47444651 None:intergenic 50.0%
! CTTTTTGCACCTGTGGTGCT+TGG + chr4_4:47444630-47444649 Msa0684140:intron 50.0%
TATAAGAGGCCAAGCACCAC+AGG - chr4_4:47444642-47444661 None:intergenic 50.0%
GGTGGTAACATAGTTGGGGA+AGG + chr4_4:47444955-47444974 Msa0684140:CDS 50.0%
GTTGGGGAAGGGGATAATGT+TGG + chr4_4:47444967-47444986 Msa0684140:CDS 50.0%
GAAGGGTTCAGGAAAGACAG+AGG + chr4_4:47445549-47445568 Msa0684140:CDS 50.0%
AGACAGAGGTCTAACAGCAG+AGG + chr4_4:47445563-47445582 Msa0684140:CDS 50.0%
CCAGTACATGAAACCCGTTG+CGG + chr4_4:47445600-47445619 Msa0684140:CDS 50.0%
! TTTTGCTCCACAACCGCAAC+GGG - chr4_4:47445616-47445635 None:intergenic 50.0%
CGTTTGCAAATGCTGCTGGT+GGG + chr4_4:47445826-47445845 Msa0684140:CDS 50.0%
! TGCTGCTGGTGGGTATGATA+AGG + chr4_4:47445836-47445855 Msa0684140:CDS 50.0%
! GCTGGTGGGTATGATAAGGT+AGG + chr4_4:47445840-47445859 Msa0684140:CDS 50.0%
! TCACATACGGTTGATGCGGA+AGG + chr4_4:47445984-47446003 Msa0684140:CDS 50.0%
! ATACGGTTGATGCGGAAGGT+AGG + chr4_4:47445988-47446007 Msa0684140:CDS 50.0%
CAGATGGCGATCTAGCTATG+AGG + chr4_4:47446267-47446286 Msa0684140:CDS 50.0%
CAACACTGCAGTCCCGTATT+GGG - chr4_4:47446708-47446727 None:intergenic 50.0%
TCAACACTGCAGTCCCGTAT+TGG - chr4_4:47446709-47446728 None:intergenic 50.0%
CCTCTCAAGCGACCTAAGAT+TGG - chr4_4:47446735-47446754 None:intergenic 50.0%
CCAATCTTAGGTCGCTTGAG+AGG + chr4_4:47446732-47446751 Msa0684140:CDS 50.0%
GTCTGTGTCGCATAGTCCAT+TGG + chr4_4:47446904-47446923 Msa0684140:intron 50.0%
GAGGTGTGGATATATTGGGC+TGG - chr4_4:47446969-47446988 None:intergenic 50.0%
! TTCAGATGGGCTTAGAGGTG+TGG - chr4_4:47446983-47447002 None:intergenic 50.0%
!! AAACCAACCTGTTTGGTGCG+GGG - chr4_4:47447429-47447448 None:intergenic 50.0%
CCAAACCTGCAGAATTCTGC+AGG - chr4_4:47447751-47447770 None:intergenic 50.0%
CCTGCAGAATTCTGCAGGTT+TGG + chr4_4:47447748-47447767 Msa0684140:CDS 50.0%
GATGCACAAAACCTGCAAGG+AGG - chr4_4:47447979-47447998 None:intergenic 50.0%
GTGTCCACGGCTATATCTGA+AGG + chr4_4:47448769-47448788 Msa0684140:CDS 50.0%
! GCAGCTTTGGCAATCCATTG+TGG - chr4_4:47448918-47448937 None:intergenic 50.0%
GTACTCAACAGGCTTCCTTG+TGG - chr4_4:47449018-47449037 None:intergenic 50.0%
GGCACTTCAGCTGATGTAGC+AGG + chr4_4:47444435-47444454 Msa0684140:intron 55.0%
ACAAGCACAACAGCAGCCAG+GGG - chr4_4:47444571-47444590 None:intergenic 55.0%
!!! AGCTGGCCTTTTTGCACCTG+TGG + chr4_4:47444623-47444642 Msa0684140:CDS 55.0%
ACAGCAGAGGAACGTAAGCG+TGG + chr4_4:47445576-47445595 Msa0684140:CDS 55.0%
! CCGCAACGGGTTTCATGTAC+TGG - chr4_4:47445603-47445622 None:intergenic 55.0%
CATGAAACCCGTTGCGGTTG+TGG + chr4_4:47445606-47445625 Msa0684140:CDS 55.0%
! GTGGGTTGTTGGCTGCTCAT+AGG + chr4_4:47445727-47445746 Msa0684140:CDS 55.0%
GGTGCGTTTGCAAATGCTGC+TGG + chr4_4:47445822-47445841 Msa0684140:CDS 55.0%
GCGTTTGCAAATGCTGCTGG+TGG + chr4_4:47445825-47445844 Msa0684140:CDS 55.0%
AGGTTGAAGGGACGTACGTG+TGG + chr4_4:47446189-47446208 Msa0684140:CDS 55.0%
AGGGACGTACGTGTGGTTGT+TGG + chr4_4:47446196-47446215 Msa0684140:CDS 55.0%
CAATGGTCGCTACAGGAACC+AGG + chr4_4:47447114-47447133 Msa0684140:intron 55.0%
! ATGAGTGGTGCTGGGATCCT+AGG + chr4_4:47447645-47447664 Msa0684140:intron 55.0%
TGGGATCCTAGGTGGTGTCT+TGG + chr4_4:47447656-47447675 Msa0684140:intron 55.0%
! TGGAGCCGTAGGAGGTTGAT+AGG + chr4_4:47447676-47447695 Msa0684140:intron 55.0%
!! GGAGCCGTAGGAGGTTGATA+GGG + chr4_4:47447677-47447696 Msa0684140:intron 55.0%
!! GAGCCGTAGGAGGTTGATAG+GGG + chr4_4:47447678-47447697 Msa0684140:intron 55.0%
CTGCCCCTATCAACCTCCTA+CGG - chr4_4:47447684-47447703 None:intergenic 55.0%
GGTAGCCTGCAGAATTCTGC+AGG + chr4_4:47447743-47447762 Msa0684140:intron 55.0%
! AGGTGAAGTGGCCGCGTTTT+TGG + chr4_4:47447935-47447954 Msa0684140:intron 55.0%
!! GTTGGTGACGGTGACGGTGA+AGG + chr4_4:47444985-47445004 Msa0684140:CDS 60.0%
GATCCCCGCACCAAACAGGT+TGG + chr4_4:47447423-47447442 Msa0684140:intron 60.0%
! AGTGGTGCTGGGATCCTAGG+TGG + chr4_4:47447648-47447667 Msa0684140:intron 60.0%
ACGGCTCCAAGACACCACCT+AGG - chr4_4:47447665-47447684 None:intergenic 60.0%
AGGTGGTGTCTTGGAGCCGT+AGG + chr4_4:47447665-47447684 Msa0684140:intron 60.0%
TGGTGTCTTGGAGCCGTAGG+AGG + chr4_4:47447668-47447687 Msa0684140:intron 60.0%
! GGTGACGGTGACGGTGAAGG+AGG + chr4_4:47444988-47445007 Msa0684140:CDS 65.0%
!! CCTGTTTGGTGCGGGGATCG+TGG - chr4_4:47447422-47447441 None:intergenic 65.0%
CCACGATCCCCGCACCAAAC+AGG + chr4_4:47447419-47447438 Msa0684140:CDS 65.0%
ACAGCAGCCAGGGGCCTAGC+AGG - chr4_4:47444562-47444581 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 47443992 47449172 47443992 ID=Msa0684140;Name=Msa0684140
chr4_4 mRNA 47443992 47449172 47443992 ID=Msa0684140-mRNA-1;Parent=Msa0684140;Name=Msa0684140-mRNA-1;_AED=0.61;_eAED=0.61;_QI=0|0.1|0.09|0.36|1|1|11|0|1053
chr4_4 exon 47443992 47444009 47443992 ID=Msa0684140-mRNA-1:exon:11664;Parent=Msa0684140-mRNA-1
chr4_4 exon 47444567 47444644 47444567 ID=Msa0684140-mRNA-1:exon:11665;Parent=Msa0684140-mRNA-1
chr4_4 exon 47444732 47444827 47444732 ID=Msa0684140-mRNA-1:exon:11666;Parent=Msa0684140-mRNA-1
chr4_4 exon 47444922 47446814 47444922 ID=Msa0684140-mRNA-1:exon:11667;Parent=Msa0684140-mRNA-1
chr4_4 exon 47447269 47447304 47447269 ID=Msa0684140-mRNA-1:exon:11668;Parent=Msa0684140-mRNA-1
chr4_4 exon 47447396 47447440 47447396 ID=Msa0684140-mRNA-1:exon:11669;Parent=Msa0684140-mRNA-1
chr4_4 exon 47447748 47447816 47447748 ID=Msa0684140-mRNA-1:exon:11670;Parent=Msa0684140-mRNA-1
chr4_4 exon 47447937 47447986 47447937 ID=Msa0684140-mRNA-1:exon:11671;Parent=Msa0684140-mRNA-1
chr4_4 exon 47448104 47448176 47448104 ID=Msa0684140-mRNA-1:exon:11672;Parent=Msa0684140-mRNA-1
chr4_4 exon 47448265 47448804 47448265 ID=Msa0684140-mRNA-1:exon:11673;Parent=Msa0684140-mRNA-1
chr4_4 exon 47448909 47449172 47448909 ID=Msa0684140-mRNA-1:exon:11674;Parent=Msa0684140-mRNA-1
chr4_4 CDS 47443992 47444009 47443992 ID=Msa0684140-mRNA-1:cds;Parent=Msa0684140-mRNA-1
chr4_4 CDS 47444567 47444644 47444567 ID=Msa0684140-mRNA-1:cds;Parent=Msa0684140-mRNA-1
chr4_4 CDS 47444732 47444827 47444732 ID=Msa0684140-mRNA-1:cds;Parent=Msa0684140-mRNA-1
chr4_4 CDS 47444922 47446814 47444922 ID=Msa0684140-mRNA-1:cds;Parent=Msa0684140-mRNA-1
chr4_4 CDS 47447269 47447304 47447269 ID=Msa0684140-mRNA-1:cds;Parent=Msa0684140-mRNA-1
chr4_4 CDS 47447396 47447440 47447396 ID=Msa0684140-mRNA-1:cds;Parent=Msa0684140-mRNA-1
chr4_4 CDS 47447748 47447816 47447748 ID=Msa0684140-mRNA-1:cds;Parent=Msa0684140-mRNA-1
chr4_4 CDS 47447937 47447986 47447937 ID=Msa0684140-mRNA-1:cds;Parent=Msa0684140-mRNA-1
chr4_4 CDS 47448104 47448176 47448104 ID=Msa0684140-mRNA-1:cds;Parent=Msa0684140-mRNA-1
chr4_4 CDS 47448265 47448804 47448265 ID=Msa0684140-mRNA-1:cds;Parent=Msa0684140-mRNA-1
chr4_4 CDS 47448909 47449172 47448909 ID=Msa0684140-mRNA-1:cds;Parent=Msa0684140-mRNA-1
Gene Sequence

>Msa0684140

ATGGATGGGTCTCCTATGGCCCCTGGCTGCTGTTGTGCTTGTTTATGGTTAGCAGGGGCTTTTTGTGTTGTATCAGCTGGCCTTTTTGCACCTGTGAAATTGTATAAATTTGATGGTAAAGGTATATGTACGGATTCAAATGGAAATGATGCTCGAGATAGCGTTGGGCATGAAGTAATGCAAGCTTATTATCAAGCAATGGATGAGTTAACACACGAGAATGGTGGTGGTAACATAGTTGGGGAAGGGGATAATGTTGGTGACGGTGACGGTGAAGGAGGTTTCTCTGTTGAAGATAACGATGAAGATGAAGAATTTGTAGATAGTGAATACAATGATGTAGATGATTCCGGTGATGTGAATGAAGATGATTCTGGTGATGTGAATGAAGATGATTCCAGTGAAGATGATTCCGGTGATATGAATGATGATGATTCCAGTGATGTGAATGAAGATGATTATGGTGATTTGAATGAAGATGATTCTGGTGATGTGAATGGAAATTCTGATTCAGAGGGATACACTGATGAAAATGTTGATGACGATTTGGAAGGAAATTATGACGATGTCAATGAATCAACATCTTCACATCCAAGTCTAGAAGAGTCGTTTTTAATAGATGGTGTTGAAGATATTGTAAAGATGAACATGTTTAACTTGCAAATTGAAGATGTTGCAAAGTTGCAATTTGGGAGCCTGGAAGTTGCCTACAATTTTTATTGTTGGTTTGCAAAGATGAACGGTTTTGCTGTCAGAAAAGGTCAAGTTATTAAAAATAAGAATGGTGATGTTCTTCAACAAACATTTTTTTGCAATCTAGAAGGGTTCAGGAAAGACAGAGGTCTAACAGCAGAGGAACGTAAGCGTGGTCCAGTACATGAAACCCGTTGCGGTTGTGGAGCAAAATTTCGAGTCCATATCGATGTAATCACGCATCGTTGGTACATTACAGTTTTCACCTTTGATCACAATCATGAAATGTTGAGTGACAAACATTGTGGGTTGTTGGCTGCTCATAGGAAGCTCAGTGAGTCAGACAAGATTCAAATTAAGTACTTTGGTAATGCTGGAATCAAAGTTGGTCAAATGATTGGTGCGTTTGCAAATGCTGCTGGTGGGTATGATAAGGTAGGATTTCTGAAGAAGGATTTACATAATCAAATTCTTAGACAGAGAAAATCGATGTCATCTGATGCTAAAGGTGCTGTTAGGTATCTTAAAGATTTGCGTTCTAAAGATCCATTGATGTTTGTTTCACATACGGTTGATGCGGAAGGTAGGCTGCAACACTTATTTTGGAGCGACGGTGAAAGTCAAAAGAATTTTGAAGTTTTTGGCGATGTACTTGCTTTCGATGCCACATATAAGAAGAATAAATATAGGTGTCCTTTTGTCGTGTTTTCAGGTGTTAATCACCACAACCAGACGATTATATTTGGTACCGCTGTTGTTTCAAATGAGGTTGAAGGGACGTACGTGTGGTTGTTGGAGCAGTTATTGGTTGCAATGAAAGGTAAGACACCGGTAGCTGTAATTACAGATGGCGATCTAGCTATGAGGAATGCGATCAAGAAAGTTTTTCCAAAGAGTTATCATAGGTTATGTGCATGGCATCTACTTCGAAATGCAATGTCCAACATTGGTAATCTTGATTTCATCCCTTTTTTCAAAAGATGTATGCTTGGTGATTATGAAGTCTGGAAATTTGAAGAACTTTGGAATGAAATGGTTGAAAGGTTTGGTTTTGAAGAAAACAGATGGATTAATGAATTGTATGAGAAAAGGAAAATGTGGGCAACAAGTCATATTCGAGGAAATTTCTTTGCAGGGATAAGAACAACATCAAGGTGTGAGGCATTTCACAGTCATATGAAGCAGTTTATACACTCAAAAATGAACATGACCGATTTTGTTAAGCACTTTCATAGGTGTGTTGCATATTTTCGCTTTAAAGAGGTTCAAGCCGATCTTAATTCCCAATACGGGACTGCAGTGTTGAAGACCAATCTTAGGTCGCTTGAGAGGTCTGCCTCAAAACAGTTTACCAAAGAAATTTTTGAGATGGTACGATCTGTCATCCAAAAGTCATGTTACAAGACTTCCTTTGAACCAGTTAGCTCTATACCCAATTTGGGACAAATCAACCACGATCCCCGCACCAAACAGCCTGCAGAATTCTGCAGGTTTGGTTTTGTTTGTTCTGTTGCCTCGGGTATCATTGTTATTGTTAGGCCGGTGAAGTGGCCGCGTTTTTGGCACTTTTGTACTCTTTTTCCTCCTTGCAGGAACTTTGATGCTGGTGAAGGAAGTTCTTCTACACCTCCATCATCCTTTCAAACAATAATCACACCGGACCAGGCTGACATTTCAATACCATCTGTGTTCATTGCCAATTGGAAGTTTCAACTTGGGGTGGATATTTTTGGTTCAATCAAGGATCCCTGTGATAATTTCTTTGAGATTGATACTTCAAATATATTGTCTGAAGGTGTTATTCGACCTGGAGACATTATTGCAACCTATTGTGGTTTTCATCAACCGCAAAGAGTCATTCTTGATTATCAGCCACGGTTTAATGTTTTTAACATGCGGATAATTGACAATGAAGGAAAGGACATCCCTTACTTTGGAATTCACAGTCCTATTAACTATCATGCAATTAAACTGGCTGATCCTACAAAACATGTCAATCCGATGTATGTTGGTTTGGTCAGGAAGAATGGCAAAAAATTTATATCAAAAGGGTTTGCCATGAAACATATGAATTTGCAAGCCATTGTGGATGAACATGAGACAGAGCAACCAGAAGAAAATTCGGATGATCAAGTCCATATTGAACATCATTTCAAATGGTTTCAACATGTGTCCACGGCTATATCTGAAGGCAAATCTGTCCTGCACTTCCCACAATGGATTGCCAAAGCTGCTAGGTTATCAGATGTGGATAATATGATTCTAATGAATGAGGAAACTAATTTTAGAATGCAATGCAATGTCAAAAGGTCCACAAGGAAGCCTGTTGAGTACTGCATAGGATTAGGTTGGTATGAACTTGCTAAATCTCTCAAACTCAATCTGGATGATCAGCTGTATTTTCTTCTGGATGACCCACCATTGAATCTTCATGTTCGAGTCCTCAGGAATGCTTATCATGATGAATAA
Protein sequence

>Msa0684140

MDGSPMAPGCCCACLWLAGAFCVVSAGLFAPVKLYKFDGKGICTDSNGNDARDSVGHEVMQAYYQAMDELTHENGGGNIVGEGDNVGDGDGEGGFSVEDNDEDEEFVDSEYNDVDDSGDVNEDDSGDVNEDDSSEDDSGDMNDDDSSDVNEDDYGDLNEDDSGDVNGNSDSEGYTDENVDDDLEGNYDDVNESTSSHPSLEESFLIDGVEDIVKMNMFNLQIEDVAKLQFGSLEVAYNFYCWFAKMNGFAVRKGQVIKNKNGDVLQQTFFCNLEGFRKDRGLTAEERKRGPVHETRCGCGAKFRVHIDVITHRWYITVFTFDHNHEMLSDKHCGLLAAHRKLSESDKIQIKYFGNAGIKVGQMIGAFANAAGGYDKVGFLKKDLHNQILRQRKSMSSDAKGAVRYLKDLRSKDPLMFVSHTVDAEGRLQHLFWSDGESQKNFEVFGDVLAFDATYKKNKYRCPFVVFSGVNHHNQTIIFGTAVVSNEVEGTYVWLLEQLLVAMKGKTPVAVITDGDLAMRNAIKKVFPKSYHRLCAWHLLRNAMSNIGNLDFIPFFKRCMLGDYEVWKFEELWNEMVERFGFEENRWINELYEKRKMWATSHIRGNFFAGIRTTSRCEAFHSHMKQFIHSKMNMTDFVKHFHRCVAYFRFKEVQADLNSQYGTAVLKTNLRSLERSASKQFTKEIFEMVRSVIQKSCYKTSFEPVSSIPNLGQINHDPRTKQPAEFCRFGFVCSVASGIIVIVRPVKWPRFWHFCTLFPPCRNFDAGEGSSSTPPSSFQTIITPDQADISIPSVFIANWKFQLGVDIFGSIKDPCDNFFEIDTSNILSEGVIRPGDIIATYCGFHQPQRVILDYQPRFNVFNMRIIDNEGKDIPYFGIHSPINYHAIKLADPTKHVNPMYVGLVRKNGKKFISKGFAMKHMNLQAIVDEHETEQPEENSDDQVHIEHHFKWFQHVSTAISEGKSVLHFPQWIAKAARLSDVDNMILMNEETNFRMQCNVKRSTRKPVEYCIGLGWYELAKSLKLNLDDQLYFLLDDPPLNLHVRVLRNAYHDE*