AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0684290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0684290 MtrunA17_Chr4g0031721 95.640 688 21 5 1 681 1 686 0.0 1352
Msa0684290 MtrunA17_Chr7g0238891 48.834 686 318 10 23 681 63 742 0.0 635
Msa0684290 MtrunA17_Chr2g0328391 48.164 708 262 16 8 681 35 671 0.0 606
Msa0684290 MtrunA17_Chr4g0031711 49.706 680 292 18 25 681 83 735 0.0 606
Msa0684290 MtrunA17_Chr4g0031701 48.714 661 279 10 25 681 24 628 0.0 598
Msa0684290 MtrunA17_Chr4g0031731 48.109 661 283 9 25 681 24 628 0.0 591
Msa0684290 MtrunA17_Chr2g0328341 56.566 495 180 7 190 681 178 640 0.0 557
Msa0684290 MtrunA17_Chr2g0328381 55.382 511 193 8 178 681 161 643 0.0 556
Msa0684290 MtrunA17_Chr2g0328431 45.156 671 292 15 28 681 45 656 0.0 536
Msa0684290 MtrunA17_Chr2g0328411 44.662 665 300 16 28 679 45 654 0.0 532
Msa0684290 MtrunA17_Chr4g0031741 55.921 456 187 5 236 681 201 652 3.70e-173 509
Msa0684290 MtrunA17_Chr2g0328361 56.433 443 157 7 241 681 209 617 5.00e-169 498
Msa0684290 MtrunA17_Chr2g0328401 42.722 632 313 10 33 660 50 636 1.39e-168 497
Msa0684290 MtrunA17_Chr2g0328371 62.109 256 92 2 381 635 1 252 1.35e-114 344
Msa0684290 MtrunA17_Chr2g0319091 32.368 380 254 2 299 678 202 578 5.74e-68 233
Msa0684290 MtrunA17_Chr5g0447691 32.796 372 249 1 307 678 173 543 1.06e-65 226
Msa0684290 MtrunA17_Chr1g0159461 32.973 370 247 1 309 678 223 591 2.14e-64 224
Msa0684290 MtrunA17_Chr7g0224271 33.000 400 238 5 296 678 286 672 1.18e-63 223
Msa0684290 MtrunA17_Chr2g0290241 31.283 374 255 2 306 678 52 424 2.23e-63 216
Msa0684290 MtrunA17_Chr4g0076091 31.733 375 254 2 306 679 170 543 6.81e-63 218
Msa0684290 MtrunA17_Chr3g0101141 30.979 439 287 8 246 678 113 541 2.33e-62 217
Msa0684290 MtrunA17_Chr3g0125811 31.351 370 253 1 309 678 201 569 1.18e-60 213
Msa0684290 MtrunA17_Chr5g0445331 32.361 377 248 5 307 678 157 531 1.94e-60 211
Msa0684290 MtrunA17_Chr4g0057891 29.688 384 247 6 308 678 146 519 1.41e-54 195
Msa0684290 MtrunA17_Chr8g0357601 30.000 420 266 9 274 678 145 551 6.18e-54 194
Msa0684290 MtrunA17_Chr2g0306641 33.509 379 234 8 306 678 120 486 4.22e-52 187
Msa0684290 MtrunA17_Chr4g0038851 28.806 427 239 6 311 678 48 468 1.12e-49 180
Msa0684290 MtrunA17_Chr8g0376381 31.300 377 236 9 306 678 164 521 1.91e-48 178
Msa0684290 MtrunA17_Chr3g0110971 30.155 388 241 7 306 678 214 586 1.50e-47 177
Msa0684290 MtrunA17_Chr7g0245601 30.328 366 241 5 315 680 442 793 6.46e-47 178
Msa0684290 MtrunA17_Chr3g0085681 27.751 418 243 7 312 678 26 435 5.86e-45 166
Msa0684290 MtrunA17_Chr4g0038761 29.111 371 245 7 315 681 88 444 4.88e-40 152
Msa0684290 MtrunA17_Chr4g0057291 26.753 385 262 9 307 680 288 663 3.74e-39 154
Msa0684290 MtrunA17_Chr2g0294461 26.873 387 262 7 306 678 205 584 1.01e-36 145
Msa0684290 MtrunA17_Chr7g0236851 28.075 374 250 7 312 678 295 656 5.75e-35 141
Msa0684290 MtrunA17_Chr4g0039661 28.496 379 249 9 308 678 190 554 5.16e-34 137
Msa0684290 MtrunA17_Chr5g0401131 27.154 383 261 7 311 680 114 491 6.82e-33 132
Msa0684290 MtrunA17_Chr5g0396491 34.286 210 131 2 311 519 56 259 1.41e-32 132
Msa0684290 MtrunA17_Chr5g0396491 30.201 149 104 0 530 678 329 477 4.76e-20 94.0
Msa0684290 MtrunA17_Chr2g0294471 25.255 392 259 6 306 678 199 575 1.61e-32 133
Msa0684290 MtrunA17_Chr1g0183641 28.346 381 245 13 306 679 118 477 2.08e-32 131
Msa0684290 MtrunA17_Chr7g0270031 26.772 381 260 8 306 678 184 553 1.44e-31 129
Msa0684290 MtrunA17_Chr3g0085361 25.549 364 200 6 371 678 1 349 3.82e-31 125
Msa0684290 MtrunA17_Chr1g0200401 27.990 393 244 15 311 678 80 458 5.40e-29 120
Msa0684290 MtrunA17_Chr6g0468561 26.702 382 255 9 309 678 293 661 4.93e-27 116
Msa0684290 MtrunA17_Chr1g0194621 25.505 396 253 16 306 678 141 517 5.25e-26 112
Msa0684290 MtrunA17_Chr3g0114841 25.907 386 244 12 320 679 131 500 1.34e-25 111
Msa0684290 MtrunA17_Chr4g0053901 24.466 421 265 12 308 681 56 470 3.04e-25 109
Msa0684290 MtrunA17_Chr5g0401421 24.703 421 266 12 308 681 32 448 4.12e-25 108
Msa0684290 MtrunA17_Chr5g0424131 26.238 404 265 13 297 679 108 499 1.52e-23 105
Msa0684290 MtrunA17_Chr2g0329591 26.667 300 206 5 311 605 74 364 8.73e-22 99.0
Msa0684290 MtrunA17_Chr8g0383981 25.570 395 241 18 308 681 136 498 2.85e-17 85.5
Msa0684290 MtrunA17_Chr7g0230731 23.114 411 274 11 281 678 346 727 3.35e-16 82.8
Msa0684290 MtrunA17_Chr7g0230771 22.195 410 279 10 281 678 349 730 3.83e-16 82.4
Msa0684290 MtrunA17_Chr2g0323111 27.222 180 128 3 503 681 131 308 3.24e-13 71.2
Msa0684290 MtrunA17_Chr8g0344101 23.709 426 262 15 297 678 193 599 4.44e-13 72.4
Msa0684290 MtrunA17_Chr4g0012071 19.458 406 291 11 281 678 173 550 1.98e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0684290 AT1G07530.1 54.971 684 267 10 37 681 86 767 0.0 723
Msa0684290 AT2G29060.1 50.997 702 278 16 9 680 28 693 0.0 656
Msa0684290 AT2G29060.2 50.657 685 269 16 9 680 28 656 0.0 649
Msa0684290 AT1G07520.1 47.202 697 306 19 8 681 38 695 0.0 548
Msa0684290 AT1G07520.3 47.202 697 306 19 8 681 39 696 0.0 548
Msa0684290 AT2G37650.1 44.100 678 321 13 27 680 71 714 0.0 535
Msa0684290 AT2G37650.2 44.100 678 321 13 27 680 59 702 0.0 535
Msa0684290 AT2G29065.1 46.667 660 277 16 34 681 34 630 0.0 531
Msa0684290 AT1G07520.2 51.706 557 218 16 147 681 4 531 1.96e-177 516
Msa0684290 AT1G07520.4 51.706 557 218 16 147 681 4 531 1.96e-177 516
Msa0684290 AT5G59450.1 47.009 468 242 4 218 681 135 600 6.54e-152 454
Msa0684290 AT3G46600.3 48.546 447 218 5 235 681 115 549 1.02e-145 436
Msa0684290 AT3G46600.1 48.546 447 218 4 235 681 147 581 2.18e-145 436
Msa0684290 AT3G46600.2 52.406 374 177 1 308 681 1 373 9.05e-140 414
Msa0684290 AT1G50600.3 33.602 372 246 1 307 678 155 525 1.77e-66 228
Msa0684290 AT1G50600.1 33.602 372 246 1 307 678 226 596 1.40e-65 227
Msa0684290 AT1G50600.2 33.602 372 246 1 307 678 230 600 1.61e-65 227
Msa0684290 AT5G48150.1 33.512 373 246 2 307 678 118 489 2.41e-64 221
Msa0684290 AT5G48150.4 33.512 373 246 2 307 678 118 489 2.41e-64 221
Msa0684290 AT5G48150.2 33.512 373 246 2 307 678 118 489 2.41e-64 221
Msa0684290 AT5G48150.3 33.512 373 246 2 307 678 118 489 2.41e-64 221
Msa0684290 AT1G21450.1 33.514 370 246 0 309 678 223 592 4.61e-63 220
Msa0684290 AT2G04890.1 32.258 372 244 2 307 678 49 412 7.48e-63 215
Msa0684290 AT4G17230.1 32.533 375 252 1 306 680 153 526 1.70e-54 195
Msa0684290 AT4G17230.2 32.533 375 252 1 306 680 153 526 1.70e-54 195
Msa0684290 AT3G03450.1 31.332 383 237 9 306 678 178 544 2.50e-51 187
Msa0684290 AT3G54220.1 29.730 370 241 6 315 680 297 651 4.57e-49 182
Msa0684290 AT1G66350.1 31.915 376 233 10 306 678 150 505 1.15e-48 179
Msa0684290 AT1G14920.1 30.688 378 241 8 306 678 167 528 7.65e-47 174
Msa0684290 AT5G17490.1 31.347 386 227 11 306 678 155 515 2.27e-46 172
Msa0684290 AT5G66770.1 31.436 369 239 8 315 678 224 583 1.82e-45 171
Msa0684290 AT2G01570.1 30.343 379 241 10 306 678 219 580 2.07e-43 165
Msa0684290 AT4G37650.1 27.621 391 258 8 310 680 145 530 2.84e-37 147
Msa0684290 AT3G50650.1 28.771 358 238 6 329 678 193 541 6.08e-37 146
Msa0684290 AT5G41920.1 26.873 387 258 7 299 678 31 399 2.02e-36 142
Msa0684290 AT1G63100.2 30.114 352 231 8 307 653 273 614 4.83e-36 144
Msa0684290 AT1G63100.1 30.114 352 231 8 307 653 248 589 5.92e-36 144
Msa0684290 AT3G49950.1 27.979 386 256 11 311 680 30 409 1.48e-31 127
Msa0684290 AT5G52510.1 27.224 371 236 11 327 678 284 639 1.58e-31 130
Msa0684290 AT1G55580.1 24.941 421 249 11 308 678 41 444 2.24e-29 122
Msa0684290 AT1G50420.1 29.717 212 140 2 311 519 57 262 2.20e-28 119
Msa0684290 AT1G50420.1 32.215 149 101 0 530 678 330 478 7.16e-21 97.1
Msa0684290 AT4G08250.1 24.722 449 308 13 249 678 39 476 6.44e-25 109
Msa0684290 AT3G13840.1 23.020 404 264 14 295 678 133 509 2.58e-14 76.6
Msa0684290 AT4G00150.1 21.410 383 263 7 304 678 201 553 2.37e-12 70.5

Find 174 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATCACACCTTTGGATTTA+TGG 0.102821 4_4:+47602274 Msa0684290:CDS
ACTCTCCACATTGTAGATTT+TGG 0.171656 4_4:+47603514 Msa0684290:CDS
AAACAAAATCAACAGGAAAA+TGG 0.197416 4_4:-47602622 None:intergenic
TGTAACCGGTGGTGGATTTA+AGG 0.223081 4_4:+47602700 Msa0684290:CDS
TCTTCTTCTGTAGCATTGTT+TGG 0.273251 4_4:-47602320 None:intergenic
TTACATTAACCAAATGCTTA+TGG 0.276145 4_4:+47602388 Msa0684290:CDS
GGAATAGAAGGGCTGGATTT+AGG 0.286604 4_4:+47604139 Msa0684290:CDS
CTTCAAGTCCTCAAATTTGA+TGG 0.299678 4_4:-47603749 None:intergenic
GTCGGCAGCAGAGTTTCTTT+TGG 0.312934 4_4:-47603389 None:intergenic
GAATCCGTTGGTTATTGATT+TGG 0.316991 4_4:+47602817 Msa0684290:CDS
TTACTAAGCAAATTTGAATC+AGG 0.323453 4_4:-47602731 None:intergenic
TTCGTTTAGAAGGGAGGTTC+AGG 0.342308 4_4:+47602859 Msa0684290:CDS
GGCAGGCCTGAAGCCAGGTT+GGG 0.342579 4_4:-47603632 None:intergenic
AAAGAAGAAGCAAATAATTC+TGG 0.356533 4_4:+47603118 Msa0684290:CDS
TCACGAGCGAGGAGATGAAT+TGG 0.360975 4_4:+47602949 Msa0684290:CDS
TCAATGCTATTGCACAGAAA+TGG 0.371102 4_4:+47603722 Msa0684290:CDS
ATAACCAACGGATTCACTTT+AGG 0.372617 4_4:-47602809 None:intergenic
TGATGTTTGAGAAAGAGTTC+TGG 0.377337 4_4:+47604034 Msa0684290:CDS
AAATGGGTTTGCAATATAGA+AGG 0.381555 4_4:-47602605 None:intergenic
TCATAGATGGATCACACCTT+TGG 0.385301 4_4:+47602266 None:intergenic
GATAAGGTGCTGCTTGGAAC+GGG 0.386499 4_4:+47603046 Msa0684290:CDS
AATGGCAGGTTCGGAATAGA+AGG 0.387477 4_4:+47604127 Msa0684290:CDS
CGGCAGGCCTGAAGCCAGGT+TGG 0.388141 4_4:-47603633 None:intergenic
AGTAATAGCAGTAGCGATTT+CGG 0.389012 4_4:+47602677 Msa0684290:CDS
ATGTATGTTTCATGATTCAT+TGG 0.389528 4_4:+47602433 Msa0684290:CDS
TTTATACATACTACTGTCAA+TGG 0.390384 4_4:+47603901 Msa0684290:CDS
TGTCTTCTTCCATAAGCATT+TGG 0.390726 4_4:-47602397 None:intergenic
AACAAAATCAACAGGAAAAT+GGG 0.391391 4_4:-47602621 None:intergenic
GCCGAGAGAGTCCAGGAGAC+AGG 0.397232 4_4:+47603652 Msa0684290:CDS
TCGCTAGATTCAAAATTGTA+TGG 0.404227 4_4:-47603480 None:intergenic
TCTGTAGCATTGTTTGGAGC+TGG 0.404262 4_4:-47602314 None:intergenic
TTTGGAGCTGGTTGAAGAAA+AGG 0.410352 4_4:-47602302 None:intergenic
TTGTGGTGAATTCTGTTTGT+CGG 0.410916 4_4:+47603791 Msa0684290:CDS
GACAGGCTTCAATATACATT+TGG 0.411821 4_4:-47603426 None:intergenic
GCAGGCCTGAAGCCAGGTTG+GGG 0.414806 4_4:-47603631 None:intergenic
AAGGGAGGTTCAGGAGGTAG+TGG 0.418003 4_4:+47602868 Msa0684290:CDS
CAATGCTATTGCACAGAAAT+GGG 0.422432 4_4:+47603723 Msa0684290:CDS
AAGGCAATATTCTTCTCCAT+TGG 0.423667 4_4:+47603273 Msa0684290:CDS
CTTCTAAACGAAGGAACAAA+AGG 0.425509 4_4:-47602848 None:intergenic
TGCCATTTCCTGTATGTCTC+TGG 0.427478 4_4:-47604111 None:intergenic
GCAATAGCATTGAACTCAAA+TGG 0.428641 4_4:-47603712 None:intergenic
GTCTCCTGGACTCTCTCGGC+AGG 0.430954 4_4:-47603649 None:intergenic
TTGAACCGTGTCGCAAAGAA+TGG 0.433149 4_4:-47603937 None:intergenic
AGGAGGAAGCGTAAATTATT+CGG 0.433733 4_4:-47604278 None:intergenic
CTACTGTTAAAACTATCATC+AGG 0.434770 4_4:-47602524 None:intergenic
TTTCAAGCTACTTCAATGAA+TGG 0.435532 4_4:+47602644 Msa0684290:CDS
GCATCCGTTACGGCTTTCAA+TGG 0.436217 4_4:+47603536 Msa0684290:CDS
GGCCAGAGACATACAGGAAA+TGG 0.438505 4_4:+47604109 Msa0684290:CDS
CCTCCTAAGCTGCTCTTGAC+AGG 0.440626 4_4:+47603598 Msa0684290:CDS
AATTTACGCTTCCTCCTGTT+GGG 0.441011 4_4:+47604284 Msa0684290:CDS
CTAGGCGAAGCCCTGTCTCC+TGG 0.442369 4_4:-47603663 None:intergenic
AGAAGGGTGTTGTGGATTTG+AGG 0.446949 4_4:+47603176 Msa0684290:CDS
TAATTTCAAAACAGCATCCC+TGG 0.447641 4_4:-47603854 None:intergenic
TTGAGAGGCCAGAGACATAC+AGG 0.447934 4_4:+47604103 Msa0684290:CDS
TGCAAGCTTCTTGAATGGAC+AGG 0.451062 4_4:-47603443 None:intergenic
TTGGAGCTGGTTGAAGAAAA+GGG 0.451298 4_4:-47602301 None:intergenic
AAATCATTCTATGAAGTCAT+TGG 0.453169 4_4:+47602473 Msa0684290:CDS
CTCTCGGCAGGCCTGAAGCC+AGG 0.453760 4_4:-47603637 None:intergenic
GATGTTTGAGAAAGAGTTCT+GGG 0.455142 4_4:+47604035 Msa0684290:CDS
AGGCAATATTCTTCTCCATT+GGG 0.457992 4_4:+47603274 Msa0684290:CDS
ATCCCTGTCAAGAGCAGCTT+AGG 0.460560 4_4:-47603601 None:intergenic
GTCCTATGCAGGTACCCAAC+AGG 0.461795 4_4:-47604298 None:intergenic
ATTCTTTGCGACACGGTTCA+AGG 0.463902 4_4:+47603939 Msa0684290:CDS
TGGATTTAGGCAACTGCCCT+TGG 0.468940 4_4:+47604152 Msa0684290:CDS
AGTAGCGATTTCGGTGTAAC+CGG 0.469350 4_4:+47602686 Msa0684290:CDS
CACGAGCGAGGAGATGAATT+GGG 0.470067 4_4:+47602950 Msa0684290:CDS
AGAAGAAGAAGATTCACCTT+TGG 0.473696 4_4:+47602334 Msa0684290:CDS
CATACAGGAAATGGCAGGTT+CGG 0.475319 4_4:+47604118 Msa0684290:CDS
TGAACCGTGTCGCAAAGAAT+GGG 0.479940 4_4:-47603936 None:intergenic
ATGAATGCAAGCTTCTTGAA+TGG 0.481139 4_4:-47603448 None:intergenic
TAATTTACGCTTCCTCCTGT+TGG 0.482014 4_4:+47604283 Msa0684290:CDS
TTCAGGAGGTAGTGGTTGAG+AGG 0.482313 4_4:+47602876 Msa0684290:CDS
TTATACATACTACTGTCAAT+GGG 0.483327 4_4:+47603902 Msa0684290:CDS
TCAGGGCTTTGTACAGAAGA+AGG 0.485059 4_4:-47602506 None:intergenic
GCTCTAGAAGCACGCATGGC+TGG 0.493848 4_4:+47603334 Msa0684290:CDS
GAAGCACGCATGGCTGGTAC+TGG 0.498249 4_4:+47603340 Msa0684290:CDS
TTGAGAGGGAGAGCGATGAA+AGG 0.499679 4_4:+47602891 Msa0684290:CDS
GATTTCATGCTTGTTGAAGA+TGG 0.502683 4_4:+47604228 Msa0684290:CDS
GCTATCCGAGCTGTTTGATA+AGG 0.506433 4_4:+47603030 Msa0684290:CDS
GATTTCGGTGTAACCGGTGG+TGG 0.506809 4_4:+47602692 Msa0684290:CDS
TCAGGAGGTAGTGGTTGAGA+GGG 0.507729 4_4:+47602877 Msa0684290:CDS
CAGGCCTGCCGAGAGAGTCC+AGG 0.510078 4_4:+47603645 Msa0684290:CDS
GATAAACGATAAATAAGGGC+AGG 0.512065 4_4:-47603559 None:intergenic
ATGAGTTATTGAGGCAGATA+AGG 0.512815 4_4:+47603254 Msa0684290:CDS
CTGCATGCTGCAAGGATGGA+AGG 0.517952 4_4:+47604254 Msa0684290:CDS
CTCCTGTTGGGTACCTGCAT+AGG 0.518592 4_4:+47604296 Msa0684290:CDS
CAGGTTCGGAATAGAAGGGC+TGG 0.521393 4_4:+47604132 Msa0684290:CDS
AAGAAACTCTGCTGCCGACA+TGG 0.522015 4_4:+47603393 Msa0684290:CDS
TGTTGCCTTGTTTCTTACCA+CGG 0.522059 4_4:-47603153 None:intergenic
AACGTTCACAATACCTTGCT+AGG 0.524003 4_4:-47603681 None:intergenic
CCGAGAGAGTCCAGGAGACA+GGG 0.524887 4_4:+47603653 Msa0684290:CDS
CAGGCCTGAAGCCAGGTTGG+GGG 0.525521 4_4:-47603630 None:intergenic
ATGGGAAACCATCAAATTTG+AGG 0.526336 4_4:+47603741 Msa0684290:CDS
ATCATTGCCAAGTCCTATGC+AGG 0.526668 4_4:-47604309 None:intergenic
TATTCTTCTCCATTGGGTGA+TGG 0.529010 4_4:+47603280 Msa0684290:CDS
ATCGTTTATCAAAACGACCT+GGG 0.530234 4_4:+47603572 Msa0684290:CDS
GAAGCAAATAATTCTGGTGG+TGG 0.534103 4_4:+47603124 Msa0684290:CDS
TGATAAGGTGCTGCTTGGAA+CGG 0.538662 4_4:+47603045 Msa0684290:CDS
GAAACTGCATGCTGCAAGGA+TGG 0.539727 4_4:+47604250 Msa0684290:CDS
GAGAAATCAATTTCATCCAA+AGG 0.543170 4_4:-47602350 None:intergenic
GCTTGGAACGGGGTGCAGAA+AGG 0.543390 4_4:+47603057 Msa0684290:CDS
CAGTTGTGTTAAATAGTCCC+AGG 0.544349 4_4:+47603836 Msa0684290:CDS
CCCTGTCTCCTGGACTCTCT+CGG 0.545286 4_4:-47603653 None:intergenic
GTTAATGAGATGTTTATCCA+AGG 0.545722 4_4:-47604169 None:intergenic
CAGTAGTAGTAATTCTGTTG+AGG 0.547986 4_4:+47602541 Msa0684290:CDS
CCTGTCAAGAGCAGCTTAGG+AGG 0.549308 4_4:-47603598 None:intergenic
TGAGAGGGAGAGCGATGAAA+GGG 0.549768 4_4:+47602892 Msa0684290:CDS
GGGTGATGGATCTCAGAGGC+TGG 0.557398 4_4:+47603294 Msa0684290:CDS
AGCTTGTGAAGGTTCTCAGA+GGG 0.558440 4_4:+47604080 Msa0684290:CDS
CACGCTCGTATCCGACCCAT+TGG 0.558547 4_4:-47603089 None:intergenic
CTGTTTGATAAGGTGCTGCT+TGG 0.560613 4_4:+47603040 Msa0684290:CDS
GCAATTTGAGAGGGGTGTGG+AGG 0.561220 4_4:+47602769 Msa0684290:CDS
ACCGGTGGTGGATTTAAGGA+TGG 0.561936 4_4:+47602704 Msa0684290:CDS
ATGAATATTATAGCTTGTGA+AGG 0.563558 4_4:+47604069 Msa0684290:CDS
TGTTCCTTCGTTTAGAAGGG+AGG 0.565721 4_4:+47602853 Msa0684290:CDS
TATCGTTTATCAAAACGACC+TGG 0.572065 4_4:+47603571 Msa0684290:CDS
TTCTAAACGAAGGAACAAAA+GGG 0.572365 4_4:-47602847 None:intergenic
CTCCTAAGCTGCTCTTGACA+GGG 0.575690 4_4:+47603599 Msa0684290:CDS
AGGCAACAAGAAGGGTGTTG+TGG 0.575933 4_4:+47603168 Msa0684290:CDS
TTAATGAGATGTTTATCCAA+GGG 0.577270 4_4:-47604168 None:intergenic
TGCATGCTGCAAGGATGGAA+GGG 0.578283 4_4:+47604255 Msa0684290:CDS
AATTTCAAAACAGCATCCCT+GGG 0.578395 4_4:-47603853 None:intergenic
TCGTTTATCAAAACGACCTG+GGG 0.584413 4_4:+47603573 Msa0684290:CDS
ATGCCCCATTCTTTGCGACA+CGG 0.584723 4_4:+47603932 Msa0684290:CDS
AGTCTGTATTGCAATTTGAG+AGG 0.585618 4_4:+47602759 Msa0684290:CDS
GAAAGGAAGAGAAGGCCAAT+GGG 0.587813 4_4:+47603074 Msa0684290:CDS
AGACAGGGCTTCGCCTAGCA+AGG 0.589816 4_4:+47603668 Msa0684290:CDS
TGTTTGAGAAAGAGTTCTGG+GGG 0.594182 4_4:+47604037 Msa0684290:CDS
TCTGCCTAAAGTGAATCCGT+TGG 0.595136 4_4:+47602805 Msa0684290:CDS
TACTGTTAAAACTATCATCA+GGG 0.596236 4_4:-47602523 None:intergenic
AAGAAACAAGGCAACAAGAA+GGG 0.596770 4_4:+47603160 Msa0684290:CDS
ATTGCAATTTGAGAGGGGTG+TGG 0.597668 4_4:+47602766 Msa0684290:CDS
TTGGTACGCTTTCACCATGT+CGG 0.598816 4_4:-47603407 None:intergenic
CTCTCCAAATCAATAACCAA+CGG 0.598936 4_4:-47602821 None:intergenic
TCCATCCTTAAATCCACCAC+CGG 0.599728 4_4:-47602705 None:intergenic
CAAATGCTAATGAGTTATTG+AGG 0.600348 4_4:+47603245 Msa0684290:CDS
GTTTAGAAGGGAGGTTCAGG+AGG 0.601573 4_4:+47602862 Msa0684290:CDS
AGAAAGGAAGAGAAGGCCAA+TGG 0.601851 4_4:+47603073 Msa0684290:CDS
GTCTGTATTGCAATTTGAGA+GGG 0.601880 4_4:+47602760 Msa0684290:CDS
CAGGGCTTTGTACAGAAGAA+GGG 0.601972 4_4:-47602505 None:intergenic
CAGGCCATTGAAAGCCGTAA+CGG 0.602915 4_4:-47603540 None:intergenic
AATGCTTATGGAAGAAGACA+TGG 0.605099 4_4:+47602400 Msa0684290:CDS
TGTGGATTTGAGGACAATGT+TGG 0.607889 4_4:+47603186 Msa0684290:CDS
AGGGTTATCCATAAATCCAA+AGG 0.611812 4_4:-47602282 None:intergenic
AAGGTTCTCAGAGGGTTGAG+AGG 0.614807 4_4:+47604088 Msa0684290:CDS
GGGAGGAAGAATCACGAGCG+AGG 0.619333 4_4:+47602938 Msa0684290:CDS
AGAGACATACAGGAAATGGC+AGG 0.620307 4_4:+47604113 Msa0684290:CDS
GGGGTGCAGAAAGGAAGAGA+AGG 0.620954 4_4:+47603066 Msa0684290:CDS
GAAGAAGCAAATAATTCTGG+TGG 0.623065 4_4:+47603121 Msa0684290:CDS
TAAGAAACAAGGCAACAAGA+AGG 0.624363 4_4:+47603159 Msa0684290:CDS
GTTAATGTAACGAAGAACAG+TGG 0.624527 4_4:-47602375 None:intergenic
AGCGATTTCGGTGTAACCGG+TGG 0.625322 4_4:+47602689 Msa0684290:CDS
GAATGCTCTAGAAGCACGCA+TGG 0.632297 4_4:+47603330 Msa0684290:CDS
AAGAGCCGTGGTAAGAAACA+AGG 0.635719 4_4:+47603148 Msa0684290:CDS
AATGAATCATGAAACATACA+TGG 0.637630 4_4:-47602431 None:intergenic
CAGCACCTTATCAAACAGCT+CGG 0.637744 4_4:-47603035 None:intergenic
GGAAGAGAAGGCCAATGGGT+CGG 0.640174 4_4:+47603078 Msa0684290:CDS
ATGTTTGAGAAAGAGTTCTG+GGG 0.644129 4_4:+47604036 Msa0684290:CDS
GAACCGTGTCGCAAAGAATG+GGG 0.648096 4_4:-47603935 None:intergenic
GATGGAAACTGCATGCTGCA+AGG 0.652853 4_4:+47604246 Msa0684290:CDS
AGTTGTGTTAAATAGTCCCA+GGG 0.652912 4_4:+47603837 Msa0684290:CDS
CTTTGCGACACGGTTCAAGG+AGG 0.657665 4_4:+47603942 Msa0684290:CDS
TGAACCTCCCTTCTAAACGA+AGG 0.660994 4_4:-47602857 None:intergenic
CTCTGAGATCCATCACCCAA+TGG 0.662757 4_4:-47603289 None:intergenic
CATTGGGTGATGGATCTCAG+AGG 0.665660 4_4:+47603290 Msa0684290:CDS
ATAAGGTGCTGCTTGGAACG+GGG 0.670615 4_4:+47603047 Msa0684290:CDS
ATGGCAGGTTCGGAATAGAA+GGG 0.671825 4_4:+47604128 Msa0684290:CDS
TCTGGTGGTGGAAAGAGCCG+TGG 0.674995 4_4:+47603136 Msa0684290:CDS
GGATGCCAAAATCTACAATG+TGG 0.681308 4_4:-47603519 None:intergenic
TAGCTTGTGAAGGTTCTCAG+AGG 0.684740 4_4:+47604079 Msa0684290:CDS
CTATGCAGGTACCCAACAGG+AGG 0.684912 4_4:-47604295 None:intergenic
CGTTTATCAAAACGACCTGG+GGG 0.713845 4_4:+47603574 Msa0684290:CDS
TCTGTATTGCAATTTGAGAG+GGG 0.714329 4_4:+47602761 Msa0684290:CDS
TTGCTCGTGAAGATCAAACG+AGG 0.754863 4_4:+47604010 Msa0684290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGATAAACGATAAATAA+GGG - chr4_4:47603566-47603585 None:intergenic 15.0%
!! GTAGTATGTATAAAAATATT+GGG - chr4_4:47603895-47603914 None:intergenic 15.0%
!! AGTAGTATGTATAAAAATAT+TGG - chr4_4:47603896-47603915 None:intergenic 15.0%
!!! TTTTGATAAACGATAAATAA+GGG - chr4_4:47603566-47603585 None:intergenic 15.0%
!! GTAGTATGTATAAAAATATT+GGG - chr4_4:47603895-47603914 None:intergenic 15.0%
!! AGTAGTATGTATAAAAATAT+TGG - chr4_4:47603896-47603915 None:intergenic 15.0%
!!! GTTTTGATAAACGATAAATA+AGG - chr4_4:47603567-47603586 None:intergenic 20.0%
!! AAAAAAAAATGAACTTCTTG+TGG + chr4_4:47603774-47603793 Msa0684290:CDS 20.0%
!!! ATGCTGTTTTGAAATTAATT+AGG + chr4_4:47603860-47603879 Msa0684290:CDS 20.0%
!!! TGCTGTTTTGAAATTAATTA+GGG + chr4_4:47603861-47603880 Msa0684290:CDS 20.0%
!!! GTTTTGATAAACGATAAATA+AGG - chr4_4:47603567-47603586 None:intergenic 20.0%
!! AAAAAAAAATGAACTTCTTG+TGG + chr4_4:47603774-47603793 Msa0684290:CDS 20.0%
!!! ATGCTGTTTTGAAATTAATT+AGG + chr4_4:47603860-47603879 Msa0684290:CDS 20.0%
!!! TGCTGTTTTGAAATTAATTA+GGG + chr4_4:47603861-47603880 Msa0684290:CDS 20.0%
! TTACATTAACCAAATGCTTA+TGG + chr4_4:47602388-47602407 Msa0684290:CDS 25.0%
! AATGAATCATGAAACATACA+TGG - chr4_4:47602434-47602453 None:intergenic 25.0%
! ATGTATGTTTCATGATTCAT+TGG + chr4_4:47602433-47602452 Msa0684290:CDS 25.0%
! AAATCATTCTATGAAGTCAT+TGG + chr4_4:47602473-47602492 Msa0684290:CDS 25.0%
! TACTGTTAAAACTATCATCA+GGG - chr4_4:47602526-47602545 None:intergenic 25.0%
! AACAAAATCAACAGGAAAAT+GGG - chr4_4:47602624-47602643 None:intergenic 25.0%
! AAACAAAATCAACAGGAAAA+TGG - chr4_4:47602625-47602644 None:intergenic 25.0%
! TTACTAAGCAAATTTGAATC+AGG - chr4_4:47602734-47602753 None:intergenic 25.0%
! AAAGAAGAAGCAAATAATTC+TGG + chr4_4:47603118-47603137 Msa0684290:CDS 25.0%
! TTTATACATACTACTGTCAA+TGG + chr4_4:47603901-47603920 Msa0684290:CDS 25.0%
! TTATACATACTACTGTCAAT+GGG + chr4_4:47603902-47603921 Msa0684290:CDS 25.0%
!! ATGAATATTATAGCTTGTGA+AGG + chr4_4:47604069-47604088 Msa0684290:CDS 25.0%
! TTAATGAGATGTTTATCCAA+GGG - chr4_4:47604171-47604190 None:intergenic 25.0%
! TTACATTAACCAAATGCTTA+TGG + chr4_4:47602388-47602407 Msa0684290:CDS 25.0%
! AATGAATCATGAAACATACA+TGG - chr4_4:47602434-47602453 None:intergenic 25.0%
! ATGTATGTTTCATGATTCAT+TGG + chr4_4:47602433-47602452 Msa0684290:CDS 25.0%
! AAATCATTCTATGAAGTCAT+TGG + chr4_4:47602473-47602492 Msa0684290:CDS 25.0%
! TACTGTTAAAACTATCATCA+GGG - chr4_4:47602526-47602545 None:intergenic 25.0%
! AACAAAATCAACAGGAAAAT+GGG - chr4_4:47602624-47602643 None:intergenic 25.0%
! AAACAAAATCAACAGGAAAA+TGG - chr4_4:47602625-47602644 None:intergenic 25.0%
! TTACTAAGCAAATTTGAATC+AGG - chr4_4:47602734-47602753 None:intergenic 25.0%
! AAAGAAGAAGCAAATAATTC+TGG + chr4_4:47603118-47603137 Msa0684290:CDS 25.0%
! TTTATACATACTACTGTCAA+TGG + chr4_4:47603901-47603920 Msa0684290:CDS 25.0%
! TTATACATACTACTGTCAAT+GGG + chr4_4:47603902-47603921 Msa0684290:CDS 25.0%
!! ATGAATATTATAGCTTGTGA+AGG + chr4_4:47604069-47604088 Msa0684290:CDS 25.0%
! TTAATGAGATGTTTATCCAA+GGG - chr4_4:47604171-47604190 None:intergenic 25.0%
GAGAAATCAATTTCATCCAA+AGG - chr4_4:47602353-47602372 None:intergenic 30.0%
CTACTGTTAAAACTATCATC+AGG - chr4_4:47602527-47602546 None:intergenic 30.0%
! AAATGGGTTTGCAATATAGA+AGG - chr4_4:47602608-47602627 None:intergenic 30.0%
GCTTGAAAAACAAAATCAAC+AGG - chr4_4:47602632-47602651 None:intergenic 30.0%
TTTCAAGCTACTTCAATGAA+TGG + chr4_4:47602644-47602663 Msa0684290:CDS 30.0%
TTCTAAACGAAGGAACAAAA+GGG - chr4_4:47602850-47602869 None:intergenic 30.0%
! TTTTGTTCCTTCGTTTAGAA+GGG + chr4_4:47602850-47602869 Msa0684290:CDS 30.0%
CAAATGCTAATGAGTTATTG+AGG + chr4_4:47603245-47603264 Msa0684290:CDS 30.0%
TCGCTAGATTCAAAATTGTA+TGG - chr4_4:47603483-47603502 None:intergenic 30.0%
! TACAATTTTGAATCTAGCGA+AGG + chr4_4:47603483-47603502 Msa0684290:CDS 30.0%
GTTAATGAGATGTTTATCCA+AGG - chr4_4:47604172-47604191 None:intergenic 30.0%
GAGAAATCAATTTCATCCAA+AGG - chr4_4:47602353-47602372 None:intergenic 30.0%
CTACTGTTAAAACTATCATC+AGG - chr4_4:47602527-47602546 None:intergenic 30.0%
! AAATGGGTTTGCAATATAGA+AGG - chr4_4:47602608-47602627 None:intergenic 30.0%
GCTTGAAAAACAAAATCAAC+AGG - chr4_4:47602632-47602651 None:intergenic 30.0%
TTTCAAGCTACTTCAATGAA+TGG + chr4_4:47602644-47602663 Msa0684290:CDS 30.0%
TTCTAAACGAAGGAACAAAA+GGG - chr4_4:47602850-47602869 None:intergenic 30.0%
! TTTTGTTCCTTCGTTTAGAA+GGG + chr4_4:47602850-47602869 Msa0684290:CDS 30.0%
CAAATGCTAATGAGTTATTG+AGG + chr4_4:47603245-47603264 Msa0684290:CDS 30.0%
TCGCTAGATTCAAAATTGTA+TGG - chr4_4:47603483-47603502 None:intergenic 30.0%
! TACAATTTTGAATCTAGCGA+AGG + chr4_4:47603483-47603502 Msa0684290:CDS 30.0%
GTTAATGAGATGTTTATCCA+AGG - chr4_4:47604172-47604191 None:intergenic 30.0%
AGGGTTATCCATAAATCCAA+AGG - chr4_4:47602285-47602304 None:intergenic 35.0%
TCTTCTTCTGTAGCATTGTT+TGG - chr4_4:47602323-47602342 None:intergenic 35.0%
AGAAGAAGAAGATTCACCTT+TGG + chr4_4:47602334-47602353 Msa0684290:CDS 35.0%
GTTAATGTAACGAAGAACAG+TGG - chr4_4:47602378-47602397 None:intergenic 35.0%
TGTCTTCTTCCATAAGCATT+TGG - chr4_4:47602400-47602419 None:intergenic 35.0%
AATGCTTATGGAAGAAGACA+TGG + chr4_4:47602400-47602419 Msa0684290:CDS 35.0%
CAGTAGTAGTAATTCTGTTG+AGG + chr4_4:47602541-47602560 Msa0684290:CDS 35.0%
AGTAATAGCAGTAGCGATTT+CGG + chr4_4:47602677-47602696 Msa0684290:CDS 35.0%
AGTCTGTATTGCAATTTGAG+AGG + chr4_4:47602759-47602778 Msa0684290:CDS 35.0%
GTCTGTATTGCAATTTGAGA+GGG + chr4_4:47602760-47602779 Msa0684290:CDS 35.0%
TCTGTATTGCAATTTGAGAG+GGG + chr4_4:47602761-47602780 Msa0684290:CDS 35.0%
! ATAACCAACGGATTCACTTT+AGG - chr4_4:47602812-47602831 None:intergenic 35.0%
! GAATCCGTTGGTTATTGATT+TGG + chr4_4:47602817-47602836 Msa0684290:CDS 35.0%
CTCTCCAAATCAATAACCAA+CGG - chr4_4:47602824-47602843 None:intergenic 35.0%
CTTCTAAACGAAGGAACAAA+AGG - chr4_4:47602851-47602870 None:intergenic 35.0%
! CTTTTGTTCCTTCGTTTAGA+AGG + chr4_4:47602849-47602868 Msa0684290:CDS 35.0%
GAAGAAGCAAATAATTCTGG+TGG + chr4_4:47603121-47603140 Msa0684290:CDS 35.0%
TAAGAAACAAGGCAACAAGA+AGG + chr4_4:47603159-47603178 Msa0684290:CDS 35.0%
AAGAAACAAGGCAACAAGAA+GGG + chr4_4:47603160-47603179 Msa0684290:CDS 35.0%
ATGAGTTATTGAGGCAGATA+AGG + chr4_4:47603254-47603273 Msa0684290:CDS 35.0%
AAGGCAATATTCTTCTCCAT+TGG + chr4_4:47603273-47603292 Msa0684290:CDS 35.0%
AGGCAATATTCTTCTCCATT+GGG + chr4_4:47603274-47603293 Msa0684290:CDS 35.0%
GACAGGCTTCAATATACATT+TGG - chr4_4:47603429-47603448 None:intergenic 35.0%
ATGAATGCAAGCTTCTTGAA+TGG - chr4_4:47603451-47603470 None:intergenic 35.0%
! ACTCTCCACATTGTAGATTT+TGG + chr4_4:47603514-47603533 Msa0684290:CDS 35.0%
GATAAACGATAAATAAGGGC+AGG - chr4_4:47603562-47603581 None:intergenic 35.0%
TATCGTTTATCAAAACGACC+TGG + chr4_4:47603571-47603590 Msa0684290:CDS 35.0%
ATCGTTTATCAAAACGACCT+GGG + chr4_4:47603572-47603591 Msa0684290:CDS 35.0%
! GCAATAGCATTGAACTCAAA+TGG - chr4_4:47603715-47603734 None:intergenic 35.0%
TCAATGCTATTGCACAGAAA+TGG + chr4_4:47603722-47603741 Msa0684290:CDS 35.0%
CAATGCTATTGCACAGAAAT+GGG + chr4_4:47603723-47603742 Msa0684290:CDS 35.0%
ATGGGAAACCATCAAATTTG+AGG + chr4_4:47603741-47603760 Msa0684290:CDS 35.0%
CTTCAAGTCCTCAAATTTGA+TGG - chr4_4:47603752-47603771 None:intergenic 35.0%
TTGTGGTGAATTCTGTTTGT+CGG + chr4_4:47603791-47603810 Msa0684290:CDS 35.0%
AGTTGTGTTAAATAGTCCCA+GGG + chr4_4:47603837-47603856 Msa0684290:CDS 35.0%
AATTTCAAAACAGCATCCCT+GGG - chr4_4:47603856-47603875 None:intergenic 35.0%
TAATTTCAAAACAGCATCCC+TGG - chr4_4:47603857-47603876 None:intergenic 35.0%
TGATGTTTGAGAAAGAGTTC+TGG + chr4_4:47604034-47604053 Msa0684290:CDS 35.0%
GATGTTTGAGAAAGAGTTCT+GGG + chr4_4:47604035-47604054 Msa0684290:CDS 35.0%
ATGTTTGAGAAAGAGTTCTG+GGG + chr4_4:47604036-47604055 Msa0684290:CDS 35.0%
! GATTTCATGCTTGTTGAAGA+TGG + chr4_4:47604228-47604247 Msa0684290:CDS 35.0%
! AGGAGGAAGCGTAAATTATT+CGG - chr4_4:47604281-47604300 None:intergenic 35.0%
AGGGTTATCCATAAATCCAA+AGG - chr4_4:47602285-47602304 None:intergenic 35.0%
TCTTCTTCTGTAGCATTGTT+TGG - chr4_4:47602323-47602342 None:intergenic 35.0%
AGAAGAAGAAGATTCACCTT+TGG + chr4_4:47602334-47602353 Msa0684290:CDS 35.0%
GTTAATGTAACGAAGAACAG+TGG - chr4_4:47602378-47602397 None:intergenic 35.0%
TGTCTTCTTCCATAAGCATT+TGG - chr4_4:47602400-47602419 None:intergenic 35.0%
AATGCTTATGGAAGAAGACA+TGG + chr4_4:47602400-47602419 Msa0684290:CDS 35.0%
CAGTAGTAGTAATTCTGTTG+AGG + chr4_4:47602541-47602560 Msa0684290:CDS 35.0%
AGTAATAGCAGTAGCGATTT+CGG + chr4_4:47602677-47602696 Msa0684290:CDS 35.0%
AGTCTGTATTGCAATTTGAG+AGG + chr4_4:47602759-47602778 Msa0684290:CDS 35.0%
GTCTGTATTGCAATTTGAGA+GGG + chr4_4:47602760-47602779 Msa0684290:CDS 35.0%
TCTGTATTGCAATTTGAGAG+GGG + chr4_4:47602761-47602780 Msa0684290:CDS 35.0%
! ATAACCAACGGATTCACTTT+AGG - chr4_4:47602812-47602831 None:intergenic 35.0%
! GAATCCGTTGGTTATTGATT+TGG + chr4_4:47602817-47602836 Msa0684290:CDS 35.0%
CTCTCCAAATCAATAACCAA+CGG - chr4_4:47602824-47602843 None:intergenic 35.0%
CTTCTAAACGAAGGAACAAA+AGG - chr4_4:47602851-47602870 None:intergenic 35.0%
! CTTTTGTTCCTTCGTTTAGA+AGG + chr4_4:47602849-47602868 Msa0684290:CDS 35.0%
GAAGAAGCAAATAATTCTGG+TGG + chr4_4:47603121-47603140 Msa0684290:CDS 35.0%
TAAGAAACAAGGCAACAAGA+AGG + chr4_4:47603159-47603178 Msa0684290:CDS 35.0%
AAGAAACAAGGCAACAAGAA+GGG + chr4_4:47603160-47603179 Msa0684290:CDS 35.0%
ATGAGTTATTGAGGCAGATA+AGG + chr4_4:47603254-47603273 Msa0684290:CDS 35.0%
AAGGCAATATTCTTCTCCAT+TGG + chr4_4:47603273-47603292 Msa0684290:CDS 35.0%
AGGCAATATTCTTCTCCATT+GGG + chr4_4:47603274-47603293 Msa0684290:CDS 35.0%
GACAGGCTTCAATATACATT+TGG - chr4_4:47603429-47603448 None:intergenic 35.0%
ATGAATGCAAGCTTCTTGAA+TGG - chr4_4:47603451-47603470 None:intergenic 35.0%
! ACTCTCCACATTGTAGATTT+TGG + chr4_4:47603514-47603533 Msa0684290:CDS 35.0%
GATAAACGATAAATAAGGGC+AGG - chr4_4:47603562-47603581 None:intergenic 35.0%
TATCGTTTATCAAAACGACC+TGG + chr4_4:47603571-47603590 Msa0684290:CDS 35.0%
ATCGTTTATCAAAACGACCT+GGG + chr4_4:47603572-47603591 Msa0684290:CDS 35.0%
! GCAATAGCATTGAACTCAAA+TGG - chr4_4:47603715-47603734 None:intergenic 35.0%
TCAATGCTATTGCACAGAAA+TGG + chr4_4:47603722-47603741 Msa0684290:CDS 35.0%
CAATGCTATTGCACAGAAAT+GGG + chr4_4:47603723-47603742 Msa0684290:CDS 35.0%
ATGGGAAACCATCAAATTTG+AGG + chr4_4:47603741-47603760 Msa0684290:CDS 35.0%
CTTCAAGTCCTCAAATTTGA+TGG - chr4_4:47603752-47603771 None:intergenic 35.0%
TTGTGGTGAATTCTGTTTGT+CGG + chr4_4:47603791-47603810 Msa0684290:CDS 35.0%
AGTTGTGTTAAATAGTCCCA+GGG + chr4_4:47603837-47603856 Msa0684290:CDS 35.0%
AATTTCAAAACAGCATCCCT+GGG - chr4_4:47603856-47603875 None:intergenic 35.0%
TAATTTCAAAACAGCATCCC+TGG - chr4_4:47603857-47603876 None:intergenic 35.0%
TGATGTTTGAGAAAGAGTTC+TGG + chr4_4:47604034-47604053 Msa0684290:CDS 35.0%
GATGTTTGAGAAAGAGTTCT+GGG + chr4_4:47604035-47604054 Msa0684290:CDS 35.0%
ATGTTTGAGAAAGAGTTCTG+GGG + chr4_4:47604036-47604055 Msa0684290:CDS 35.0%
! GATTTCATGCTTGTTGAAGA+TGG + chr4_4:47604228-47604247 Msa0684290:CDS 35.0%
! AGGAGGAAGCGTAAATTATT+CGG - chr4_4:47604281-47604300 None:intergenic 35.0%
GGATCACACCTTTGGATTTA+TGG + chr4_4:47602274-47602293 Msa0684290:CDS 40.0%
TTGGAGCTGGTTGAAGAAAA+GGG - chr4_4:47602304-47602323 None:intergenic 40.0%
! TTTGGAGCTGGTTGAAGAAA+AGG - chr4_4:47602305-47602324 None:intergenic 40.0%
GAAGCAAATAATTCTGGTGG+TGG + chr4_4:47603124-47603143 Msa0684290:CDS 40.0%
!! TGTTGCCTTGTTTCTTACCA+CGG - chr4_4:47603156-47603175 None:intergenic 40.0%
TGTGGATTTGAGGACAATGT+TGG + chr4_4:47603186-47603205 Msa0684290:CDS 40.0%
TATTCTTCTCCATTGGGTGA+TGG + chr4_4:47603280-47603299 Msa0684290:CDS 40.0%
GGATGCCAAAATCTACAATG+TGG - chr4_4:47603522-47603541 None:intergenic 40.0%
!! GTAGATTTTGGCATCCGTTA+CGG + chr4_4:47603526-47603545 Msa0684290:CDS 40.0%
TCGTTTATCAAAACGACCTG+GGG + chr4_4:47603573-47603592 Msa0684290:CDS 40.0%
AACGTTCACAATACCTTGCT+AGG - chr4_4:47603684-47603703 None:intergenic 40.0%
CAGTTGTGTTAAATAGTCCC+AGG + chr4_4:47603836-47603855 Msa0684290:CDS 40.0%
! TGTTTGAGAAAGAGTTCTGG+GGG + chr4_4:47604037-47604056 Msa0684290:CDS 40.0%
TAATTTACGCTTCCTCCTGT+TGG + chr4_4:47604283-47604302 Msa0684290:CDS 40.0%
AATTTACGCTTCCTCCTGTT+GGG + chr4_4:47604284-47604303 Msa0684290:CDS 40.0%
GGATCACACCTTTGGATTTA+TGG + chr4_4:47602274-47602293 Msa0684290:CDS 40.0%
TTGGAGCTGGTTGAAGAAAA+GGG - chr4_4:47602304-47602323 None:intergenic 40.0%
! TTTGGAGCTGGTTGAAGAAA+AGG - chr4_4:47602305-47602324 None:intergenic 40.0%
GAAGCAAATAATTCTGGTGG+TGG + chr4_4:47603124-47603143 Msa0684290:CDS 40.0%
!! TGTTGCCTTGTTTCTTACCA+CGG - chr4_4:47603156-47603175 None:intergenic 40.0%
TGTGGATTTGAGGACAATGT+TGG + chr4_4:47603186-47603205 Msa0684290:CDS 40.0%
TATTCTTCTCCATTGGGTGA+TGG + chr4_4:47603280-47603299 Msa0684290:CDS 40.0%
GGATGCCAAAATCTACAATG+TGG - chr4_4:47603522-47603541 None:intergenic 40.0%
!! GTAGATTTTGGCATCCGTTA+CGG + chr4_4:47603526-47603545 Msa0684290:CDS 40.0%
TCGTTTATCAAAACGACCTG+GGG + chr4_4:47603573-47603592 Msa0684290:CDS 40.0%
AACGTTCACAATACCTTGCT+AGG - chr4_4:47603684-47603703 None:intergenic 40.0%
CAGTTGTGTTAAATAGTCCC+AGG + chr4_4:47603836-47603855 Msa0684290:CDS 40.0%
! TGTTTGAGAAAGAGTTCTGG+GGG + chr4_4:47604037-47604056 Msa0684290:CDS 40.0%
TAATTTACGCTTCCTCCTGT+TGG + chr4_4:47604283-47604302 Msa0684290:CDS 40.0%
AATTTACGCTTCCTCCTGTT+GGG + chr4_4:47604284-47604303 Msa0684290:CDS 40.0%
! TCTGTAGCATTGTTTGGAGC+TGG - chr4_4:47602317-47602336 None:intergenic 45.0%
! CAGGGCTTTGTACAGAAGAA+GGG - chr4_4:47602508-47602527 None:intergenic 45.0%
! TCAGGGCTTTGTACAGAAGA+AGG - chr4_4:47602509-47602528 None:intergenic 45.0%
! AGTAGCGATTTCGGTGTAAC+CGG + chr4_4:47602686-47602705 Msa0684290:CDS 45.0%
!! TGTAACCGGTGGTGGATTTA+AGG + chr4_4:47602700-47602719 Msa0684290:CDS 45.0%
TCCATCCTTAAATCCACCAC+CGG - chr4_4:47602708-47602727 None:intergenic 45.0%
ATTGCAATTTGAGAGGGGTG+TGG + chr4_4:47602766-47602785 Msa0684290:CDS 45.0%
TCTGCCTAAAGTGAATCCGT+TGG + chr4_4:47602805-47602824 Msa0684290:CDS 45.0%
TGTTCCTTCGTTTAGAAGGG+AGG + chr4_4:47602853-47602872 Msa0684290:CDS 45.0%
TGAACCTCCCTTCTAAACGA+AGG - chr4_4:47602860-47602879 None:intergenic 45.0%
TTCGTTTAGAAGGGAGGTTC+AGG + chr4_4:47602859-47602878 Msa0684290:CDS 45.0%
!! AACGTTTTTCAGCTGAGTCG+AGG + chr4_4:47602915-47602934 Msa0684290:CDS 45.0%
!! ACGTTTTTCAGCTGAGTCGA+GGG + chr4_4:47602916-47602935 Msa0684290:CDS 45.0%
GCTATCCGAGCTGTTTGATA+AGG + chr4_4:47603030-47603049 Msa0684290:CDS 45.0%
CAGCACCTTATCAAACAGCT+CGG - chr4_4:47603038-47603057 None:intergenic 45.0%
!! CTGTTTGATAAGGTGCTGCT+TGG + chr4_4:47603040-47603059 Msa0684290:CDS 45.0%
!! TGATAAGGTGCTGCTTGGAA+CGG + chr4_4:47603045-47603064 Msa0684290:CDS 45.0%
AGAAAGGAAGAGAAGGCCAA+TGG + chr4_4:47603073-47603092 Msa0684290:CDS 45.0%
GAAAGGAAGAGAAGGCCAAT+GGG + chr4_4:47603074-47603093 Msa0684290:CDS 45.0%
AAGAGCCGTGGTAAGAAACA+AGG + chr4_4:47603148-47603167 Msa0684290:CDS 45.0%
!! AGAAGGGTGTTGTGGATTTG+AGG + chr4_4:47603176-47603195 Msa0684290:CDS 45.0%
TTGGTACGCTTTCACCATGT+CGG - chr4_4:47603410-47603429 None:intergenic 45.0%
TGCAAGCTTCTTGAATGGAC+AGG - chr4_4:47603446-47603465 None:intergenic 45.0%
CGTTTATCAAAACGACCTGG+GGG + chr4_4:47603574-47603593 Msa0684290:CDS 45.0%
TGAACCGTGTCGCAAAGAAT+GGG - chr4_4:47603939-47603958 None:intergenic 45.0%
TTGAACCGTGTCGCAAAGAA+TGG - chr4_4:47603940-47603959 None:intergenic 45.0%
ATTCTTTGCGACACGGTTCA+AGG + chr4_4:47603939-47603958 Msa0684290:CDS 45.0%
TTGCTCGTGAAGATCAAACG+AGG + chr4_4:47604010-47604029 Msa0684290:CDS 45.0%
! TAGCTTGTGAAGGTTCTCAG+AGG + chr4_4:47604079-47604098 Msa0684290:CDS 45.0%
AGCTTGTGAAGGTTCTCAGA+GGG + chr4_4:47604080-47604099 Msa0684290:CDS 45.0%
! TGCCATTTCCTGTATGTCTC+TGG - chr4_4:47604114-47604133 None:intergenic 45.0%
AGAGACATACAGGAAATGGC+AGG + chr4_4:47604113-47604132 Msa0684290:CDS 45.0%
CATACAGGAAATGGCAGGTT+CGG + chr4_4:47604118-47604137 Msa0684290:CDS 45.0%
AATGGCAGGTTCGGAATAGA+AGG + chr4_4:47604127-47604146 Msa0684290:CDS 45.0%
ATGGCAGGTTCGGAATAGAA+GGG + chr4_4:47604128-47604147 Msa0684290:CDS 45.0%
GGAATAGAAGGGCTGGATTT+AGG + chr4_4:47604139-47604158 Msa0684290:CDS 45.0%
! TCTGTAGCATTGTTTGGAGC+TGG - chr4_4:47602317-47602336 None:intergenic 45.0%
! CAGGGCTTTGTACAGAAGAA+GGG - chr4_4:47602508-47602527 None:intergenic 45.0%
! TCAGGGCTTTGTACAGAAGA+AGG - chr4_4:47602509-47602528 None:intergenic 45.0%
! AGTAGCGATTTCGGTGTAAC+CGG + chr4_4:47602686-47602705 Msa0684290:CDS 45.0%
!! TGTAACCGGTGGTGGATTTA+AGG + chr4_4:47602700-47602719 Msa0684290:CDS 45.0%
TCCATCCTTAAATCCACCAC+CGG - chr4_4:47602708-47602727 None:intergenic 45.0%
ATTGCAATTTGAGAGGGGTG+TGG + chr4_4:47602766-47602785 Msa0684290:CDS 45.0%
TCTGCCTAAAGTGAATCCGT+TGG + chr4_4:47602805-47602824 Msa0684290:CDS 45.0%
TGTTCCTTCGTTTAGAAGGG+AGG + chr4_4:47602853-47602872 Msa0684290:CDS 45.0%
TGAACCTCCCTTCTAAACGA+AGG - chr4_4:47602860-47602879 None:intergenic 45.0%
TTCGTTTAGAAGGGAGGTTC+AGG + chr4_4:47602859-47602878 Msa0684290:CDS 45.0%
!! AACGTTTTTCAGCTGAGTCG+AGG + chr4_4:47602915-47602934 Msa0684290:CDS 45.0%
!! ACGTTTTTCAGCTGAGTCGA+GGG + chr4_4:47602916-47602935 Msa0684290:CDS 45.0%
GCTATCCGAGCTGTTTGATA+AGG + chr4_4:47603030-47603049 Msa0684290:CDS 45.0%
CAGCACCTTATCAAACAGCT+CGG - chr4_4:47603038-47603057 None:intergenic 45.0%
!! CTGTTTGATAAGGTGCTGCT+TGG + chr4_4:47603040-47603059 Msa0684290:CDS 45.0%
!! TGATAAGGTGCTGCTTGGAA+CGG + chr4_4:47603045-47603064 Msa0684290:CDS 45.0%
AGAAAGGAAGAGAAGGCCAA+TGG + chr4_4:47603073-47603092 Msa0684290:CDS 45.0%
GAAAGGAAGAGAAGGCCAAT+GGG + chr4_4:47603074-47603093 Msa0684290:CDS 45.0%
AAGAGCCGTGGTAAGAAACA+AGG + chr4_4:47603148-47603167 Msa0684290:CDS 45.0%
!! AGAAGGGTGTTGTGGATTTG+AGG + chr4_4:47603176-47603195 Msa0684290:CDS 45.0%
TTGGTACGCTTTCACCATGT+CGG - chr4_4:47603410-47603429 None:intergenic 45.0%
TGCAAGCTTCTTGAATGGAC+AGG - chr4_4:47603446-47603465 None:intergenic 45.0%
CGTTTATCAAAACGACCTGG+GGG + chr4_4:47603574-47603593 Msa0684290:CDS 45.0%
TGAACCGTGTCGCAAAGAAT+GGG - chr4_4:47603939-47603958 None:intergenic 45.0%
TTGAACCGTGTCGCAAAGAA+TGG - chr4_4:47603940-47603959 None:intergenic 45.0%
ATTCTTTGCGACACGGTTCA+AGG + chr4_4:47603939-47603958 Msa0684290:CDS 45.0%
TTGCTCGTGAAGATCAAACG+AGG + chr4_4:47604010-47604029 Msa0684290:CDS 45.0%
! TAGCTTGTGAAGGTTCTCAG+AGG + chr4_4:47604079-47604098 Msa0684290:CDS 45.0%
AGCTTGTGAAGGTTCTCAGA+GGG + chr4_4:47604080-47604099 Msa0684290:CDS 45.0%
! TGCCATTTCCTGTATGTCTC+TGG - chr4_4:47604114-47604133 None:intergenic 45.0%
AGAGACATACAGGAAATGGC+AGG + chr4_4:47604113-47604132 Msa0684290:CDS 45.0%
CATACAGGAAATGGCAGGTT+CGG + chr4_4:47604118-47604137 Msa0684290:CDS 45.0%
AATGGCAGGTTCGGAATAGA+AGG + chr4_4:47604127-47604146 Msa0684290:CDS 45.0%
ATGGCAGGTTCGGAATAGAA+GGG + chr4_4:47604128-47604147 Msa0684290:CDS 45.0%
GGAATAGAAGGGCTGGATTT+AGG + chr4_4:47604139-47604158 Msa0684290:CDS 45.0%
!! ACCGGTGGTGGATTTAAGGA+TGG + chr4_4:47602704-47602723 Msa0684290:CDS 50.0%
GTTTAGAAGGGAGGTTCAGG+AGG + chr4_4:47602862-47602881 Msa0684290:CDS 50.0%
! TTCAGGAGGTAGTGGTTGAG+AGG + chr4_4:47602876-47602895 Msa0684290:CDS 50.0%
! TCAGGAGGTAGTGGTTGAGA+GGG + chr4_4:47602877-47602896 Msa0684290:CDS 50.0%
TTGAGAGGGAGAGCGATGAA+AGG + chr4_4:47602891-47602910 Msa0684290:CDS 50.0%
TGAGAGGGAGAGCGATGAAA+GGG + chr4_4:47602892-47602911 Msa0684290:CDS 50.0%
!! CGTTTTTCAGCTGAGTCGAG+GGG + chr4_4:47602917-47602936 Msa0684290:CDS 50.0%
!! GTTTTTCAGCTGAGTCGAGG+GGG + chr4_4:47602918-47602937 Msa0684290:CDS 50.0%
TCACGAGCGAGGAGATGAAT+TGG + chr4_4:47602949-47602968 Msa0684290:CDS 50.0%
CACGAGCGAGGAGATGAATT+GGG + chr4_4:47602950-47602969 Msa0684290:CDS 50.0%
!! GATAAGGTGCTGCTTGGAAC+GGG + chr4_4:47603046-47603065 Msa0684290:CDS 50.0%
!! ATAAGGTGCTGCTTGGAACG+GGG + chr4_4:47603047-47603066 Msa0684290:CDS 50.0%
!! AGGCAACAAGAAGGGTGTTG+TGG + chr4_4:47603168-47603187 Msa0684290:CDS 50.0%
!! CTCTGAGATCCATCACCCAA+TGG - chr4_4:47603292-47603311 None:intergenic 50.0%
!! CATTGGGTGATGGATCTCAG+AGG + chr4_4:47603290-47603309 Msa0684290:CDS 50.0%
!! GAATGCTCTAGAAGCACGCA+TGG + chr4_4:47603330-47603349 Msa0684290:CDS 50.0%
! GTCGGCAGCAGAGTTTCTTT+TGG - chr4_4:47603392-47603411 None:intergenic 50.0%
AAGAAACTCTGCTGCCGACA+TGG + chr4_4:47603393-47603412 Msa0684290:CDS 50.0%
GCATCCGTTACGGCTTTCAA+TGG + chr4_4:47603536-47603555 Msa0684290:CDS 50.0%
CAGGCCATTGAAAGCCGTAA+CGG - chr4_4:47603543-47603562 None:intergenic 50.0%
CTCCTAAGCTGCTCTTGACA+GGG + chr4_4:47603599-47603618 Msa0684290:CDS 50.0%
ATCCCTGTCAAGAGCAGCTT+AGG - chr4_4:47603604-47603623 None:intergenic 50.0%
ATGCCCCATTCTTTGCGACA+CGG + chr4_4:47603932-47603951 Msa0684290:CDS 50.0%
GAACCGTGTCGCAAAGAATG+GGG - chr4_4:47603938-47603957 None:intergenic 50.0%
!! TTGAGAAAGAGTTCTGGGGG+AGG + chr4_4:47604040-47604059 Msa0684290:CDS 50.0%
!! TGAGAAAGAGTTCTGGGGGA+GGG + chr4_4:47604041-47604060 Msa0684290:CDS 50.0%
AAGGTTCTCAGAGGGTTGAG+AGG + chr4_4:47604088-47604107 Msa0684290:CDS 50.0%
TTGAGAGGCCAGAGACATAC+AGG + chr4_4:47604103-47604122 Msa0684290:CDS 50.0%
GGCCAGAGACATACAGGAAA+TGG + chr4_4:47604109-47604128 Msa0684290:CDS 50.0%
TGGATTTAGGCAACTGCCCT+TGG + chr4_4:47604152-47604171 Msa0684290:CDS 50.0%
GATGGAAACTGCATGCTGCA+AGG + chr4_4:47604246-47604265 Msa0684290:CDS 50.0%
GAAACTGCATGCTGCAAGGA+TGG + chr4_4:47604250-47604269 Msa0684290:CDS 50.0%
TGCATGCTGCAAGGATGGAA+GGG + chr4_4:47604255-47604274 Msa0684290:CDS 50.0%
!! ACCGGTGGTGGATTTAAGGA+TGG + chr4_4:47602704-47602723 Msa0684290:CDS 50.0%
GTTTAGAAGGGAGGTTCAGG+AGG + chr4_4:47602862-47602881 Msa0684290:CDS 50.0%
! TTCAGGAGGTAGTGGTTGAG+AGG + chr4_4:47602876-47602895 Msa0684290:CDS 50.0%
! TCAGGAGGTAGTGGTTGAGA+GGG + chr4_4:47602877-47602896 Msa0684290:CDS 50.0%
TTGAGAGGGAGAGCGATGAA+AGG + chr4_4:47602891-47602910 Msa0684290:CDS 50.0%
TGAGAGGGAGAGCGATGAAA+GGG + chr4_4:47602892-47602911 Msa0684290:CDS 50.0%
!! CGTTTTTCAGCTGAGTCGAG+GGG + chr4_4:47602917-47602936 Msa0684290:CDS 50.0%
!! GTTTTTCAGCTGAGTCGAGG+GGG + chr4_4:47602918-47602937 Msa0684290:CDS 50.0%
TCACGAGCGAGGAGATGAAT+TGG + chr4_4:47602949-47602968 Msa0684290:CDS 50.0%
CACGAGCGAGGAGATGAATT+GGG + chr4_4:47602950-47602969 Msa0684290:CDS 50.0%
!! GATAAGGTGCTGCTTGGAAC+GGG + chr4_4:47603046-47603065 Msa0684290:CDS 50.0%
!! ATAAGGTGCTGCTTGGAACG+GGG + chr4_4:47603047-47603066 Msa0684290:CDS 50.0%
!! AGGCAACAAGAAGGGTGTTG+TGG + chr4_4:47603168-47603187 Msa0684290:CDS 50.0%
!! CTCTGAGATCCATCACCCAA+TGG - chr4_4:47603292-47603311 None:intergenic 50.0%
!! CATTGGGTGATGGATCTCAG+AGG + chr4_4:47603290-47603309 Msa0684290:CDS 50.0%
!! GAATGCTCTAGAAGCACGCA+TGG + chr4_4:47603330-47603349 Msa0684290:CDS 50.0%
! GTCGGCAGCAGAGTTTCTTT+TGG - chr4_4:47603392-47603411 None:intergenic 50.0%
AAGAAACTCTGCTGCCGACA+TGG + chr4_4:47603393-47603412 Msa0684290:CDS 50.0%
GCATCCGTTACGGCTTTCAA+TGG + chr4_4:47603536-47603555 Msa0684290:CDS 50.0%
CAGGCCATTGAAAGCCGTAA+CGG - chr4_4:47603543-47603562 None:intergenic 50.0%
CTCCTAAGCTGCTCTTGACA+GGG + chr4_4:47603599-47603618 Msa0684290:CDS 50.0%
ATCCCTGTCAAGAGCAGCTT+AGG - chr4_4:47603604-47603623 None:intergenic 50.0%
ATGCCCCATTCTTTGCGACA+CGG + chr4_4:47603932-47603951 Msa0684290:CDS 50.0%
GAACCGTGTCGCAAAGAATG+GGG - chr4_4:47603938-47603957 None:intergenic 50.0%
!! TTGAGAAAGAGTTCTGGGGG+AGG + chr4_4:47604040-47604059 Msa0684290:CDS 50.0%
!! TGAGAAAGAGTTCTGGGGGA+GGG + chr4_4:47604041-47604060 Msa0684290:CDS 50.0%
AAGGTTCTCAGAGGGTTGAG+AGG + chr4_4:47604088-47604107 Msa0684290:CDS 50.0%
TTGAGAGGCCAGAGACATAC+AGG + chr4_4:47604103-47604122 Msa0684290:CDS 50.0%
GGCCAGAGACATACAGGAAA+TGG + chr4_4:47604109-47604128 Msa0684290:CDS 50.0%
TGGATTTAGGCAACTGCCCT+TGG + chr4_4:47604152-47604171 Msa0684290:CDS 50.0%
GATGGAAACTGCATGCTGCA+AGG + chr4_4:47604246-47604265 Msa0684290:CDS 50.0%
GAAACTGCATGCTGCAAGGA+TGG + chr4_4:47604250-47604269 Msa0684290:CDS 50.0%
TGCATGCTGCAAGGATGGAA+GGG + chr4_4:47604255-47604274 Msa0684290:CDS 50.0%
! AGCGATTTCGGTGTAACCGG+TGG + chr4_4:47602689-47602708 Msa0684290:CDS 55.0%
! GATTTCGGTGTAACCGGTGG+TGG + chr4_4:47602692-47602711 Msa0684290:CDS 55.0%
! GCAATTTGAGAGGGGTGTGG+AGG + chr4_4:47602769-47602788 Msa0684290:CDS 55.0%
AAGGGAGGTTCAGGAGGTAG+TGG + chr4_4:47602868-47602887 Msa0684290:CDS 55.0%
GGGGTGCAGAAAGGAAGAGA+AGG + chr4_4:47603066-47603085 Msa0684290:CDS 55.0%
GGAAGAGAAGGCCAATGGGT+CGG + chr4_4:47603078-47603097 Msa0684290:CDS 55.0%
CCTGTCAAGAGCAGCTTAGG+AGG - chr4_4:47603601-47603620 None:intergenic 55.0%
CCTCCTAAGCTGCTCTTGAC+AGG + chr4_4:47603598-47603617 Msa0684290:CDS 55.0%
CTTTGCGACACGGTTCAAGG+AGG + chr4_4:47603942-47603961 Msa0684290:CDS 55.0%
CAGGTTCGGAATAGAAGGGC+TGG + chr4_4:47604132-47604151 Msa0684290:CDS 55.0%
CTGCATGCTGCAAGGATGGA+AGG + chr4_4:47604254-47604273 Msa0684290:CDS 55.0%
CTATGCAGGTACCCAACAGG+AGG - chr4_4:47604298-47604317 None:intergenic 55.0%
! AGCGATTTCGGTGTAACCGG+TGG + chr4_4:47602689-47602708 Msa0684290:CDS 55.0%
! GATTTCGGTGTAACCGGTGG+TGG + chr4_4:47602692-47602711 Msa0684290:CDS 55.0%
! GCAATTTGAGAGGGGTGTGG+AGG + chr4_4:47602769-47602788 Msa0684290:CDS 55.0%
AAGGGAGGTTCAGGAGGTAG+TGG + chr4_4:47602868-47602887 Msa0684290:CDS 55.0%
GGGGTGCAGAAAGGAAGAGA+AGG + chr4_4:47603066-47603085 Msa0684290:CDS 55.0%
GGAAGAGAAGGCCAATGGGT+CGG + chr4_4:47603078-47603097 Msa0684290:CDS 55.0%
CCTGTCAAGAGCAGCTTAGG+AGG - chr4_4:47603601-47603620 None:intergenic 55.0%
CCTCCTAAGCTGCTCTTGAC+AGG + chr4_4:47603598-47603617 Msa0684290:CDS 55.0%
CTTTGCGACACGGTTCAAGG+AGG + chr4_4:47603942-47603961 Msa0684290:CDS 55.0%
CAGGTTCGGAATAGAAGGGC+TGG + chr4_4:47604132-47604151 Msa0684290:CDS 55.0%
CTGCATGCTGCAAGGATGGA+AGG + chr4_4:47604254-47604273 Msa0684290:CDS 55.0%
CTATGCAGGTACCCAACAGG+AGG - chr4_4:47604298-47604317 None:intergenic 55.0%
TTTCAGCTGAGTCGAGGGGG+AGG + chr4_4:47602921-47602940 Msa0684290:CDS 60.0%
GGGAGGAAGAATCACGAGCG+AGG + chr4_4:47602938-47602957 Msa0684290:CDS 60.0%
GCTTGGAACGGGGTGCAGAA+AGG + chr4_4:47603057-47603076 Msa0684290:CDS 60.0%
CACGCTCGTATCCGACCCAT+TGG - chr4_4:47603092-47603111 None:intergenic 60.0%
!! TCTGGTGGTGGAAAGAGCCG+TGG + chr4_4:47603136-47603155 Msa0684290:CDS 60.0%
!! GGGTGATGGATCTCAGAGGC+TGG + chr4_4:47603294-47603313 Msa0684290:CDS 60.0%
!! GCTCTAGAAGCACGCATGGC+TGG + chr4_4:47603334-47603353 Msa0684290:CDS 60.0%
GAAGCACGCATGGCTGGTAC+TGG + chr4_4:47603340-47603359 Msa0684290:CDS 60.0%
GGGATAGAACTCCCCCAACC+TGG + chr4_4:47603619-47603638 Msa0684290:CDS 60.0%
AACTCCCCCAACCTGGCTTC+AGG + chr4_4:47603626-47603645 Msa0684290:CDS 60.0%
CCCTGTCTCCTGGACTCTCT+CGG - chr4_4:47603656-47603675 None:intergenic 60.0%
CCGAGAGAGTCCAGGAGACA+GGG + chr4_4:47603653-47603672 Msa0684290:CDS 60.0%
AGACAGGGCTTCGCCTAGCA+AGG + chr4_4:47603668-47603687 Msa0684290:CDS 60.0%
TTTCAGCTGAGTCGAGGGGG+AGG + chr4_4:47602921-47602940 Msa0684290:CDS 60.0%
GGGAGGAAGAATCACGAGCG+AGG + chr4_4:47602938-47602957 Msa0684290:CDS 60.0%
GCTTGGAACGGGGTGCAGAA+AGG + chr4_4:47603057-47603076 Msa0684290:CDS 60.0%
CACGCTCGTATCCGACCCAT+TGG - chr4_4:47603092-47603111 None:intergenic 60.0%
!! TCTGGTGGTGGAAAGAGCCG+TGG + chr4_4:47603136-47603155 Msa0684290:CDS 60.0%
!! GGGTGATGGATCTCAGAGGC+TGG + chr4_4:47603294-47603313 Msa0684290:CDS 60.0%
!! GCTCTAGAAGCACGCATGGC+TGG + chr4_4:47603334-47603353 Msa0684290:CDS 60.0%
GAAGCACGCATGGCTGGTAC+TGG + chr4_4:47603340-47603359 Msa0684290:CDS 60.0%
GGGATAGAACTCCCCCAACC+TGG + chr4_4:47603619-47603638 Msa0684290:CDS 60.0%
AACTCCCCCAACCTGGCTTC+AGG + chr4_4:47603626-47603645 Msa0684290:CDS 60.0%
CCCTGTCTCCTGGACTCTCT+CGG - chr4_4:47603656-47603675 None:intergenic 60.0%
CCGAGAGAGTCCAGGAGACA+GGG + chr4_4:47603653-47603672 Msa0684290:CDS 60.0%
AGACAGGGCTTCGCCTAGCA+AGG + chr4_4:47603668-47603687 Msa0684290:CDS 60.0%
AGCAGCTTAGGAGGTCCCCC+AGG - chr4_4:47603592-47603611 None:intergenic 65.0%
! CAGGCCTGAAGCCAGGTTGG+GGG - chr4_4:47603633-47603652 None:intergenic 65.0%
GCAGGCCTGAAGCCAGGTTG+GGG - chr4_4:47603634-47603653 None:intergenic 65.0%
GGCAGGCCTGAAGCCAGGTT+GGG - chr4_4:47603635-47603654 None:intergenic 65.0%
GTCTCCTGGACTCTCTCGGC+AGG - chr4_4:47603652-47603671 None:intergenic 65.0%
GCCGAGAGAGTCCAGGAGAC+AGG + chr4_4:47603652-47603671 Msa0684290:CDS 65.0%
CTAGGCGAAGCCCTGTCTCC+TGG - chr4_4:47603666-47603685 None:intergenic 65.0%
AGCAGCTTAGGAGGTCCCCC+AGG - chr4_4:47603592-47603611 None:intergenic 65.0%
! CAGGCCTGAAGCCAGGTTGG+GGG - chr4_4:47603633-47603652 None:intergenic 65.0%
GCAGGCCTGAAGCCAGGTTG+GGG - chr4_4:47603634-47603653 None:intergenic 65.0%
GGCAGGCCTGAAGCCAGGTT+GGG - chr4_4:47603635-47603654 None:intergenic 65.0%
GTCTCCTGGACTCTCTCGGC+AGG - chr4_4:47603652-47603671 None:intergenic 65.0%
GCCGAGAGAGTCCAGGAGAC+AGG + chr4_4:47603652-47603671 Msa0684290:CDS 65.0%
CTAGGCGAAGCCCTGTCTCC+TGG - chr4_4:47603666-47603685 None:intergenic 65.0%
CGGCAGGCCTGAAGCCAGGT+TGG - chr4_4:47603636-47603655 None:intergenic 70.0%
CTCTCGGCAGGCCTGAAGCC+AGG - chr4_4:47603640-47603659 None:intergenic 70.0%
CAGGCCTGCCGAGAGAGTCC+AGG + chr4_4:47603645-47603664 Msa0684290:CDS 70.0%
CGGCAGGCCTGAAGCCAGGT+TGG - chr4_4:47603636-47603655 None:intergenic 70.0%
CTCTCGGCAGGCCTGAAGCC+AGG - chr4_4:47603640-47603659 None:intergenic 70.0%
CAGGCCTGCCGAGAGAGTCC+AGG + chr4_4:47603645-47603664 Msa0684290:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 47602272 47604317 47602272 ID=Msa0684290;Name=Msa0684290
chr4_4 mRNA 47602272 47604317 47602272 ID=Msa0684290-mRNA-1;Parent=Msa0684290;Name=Msa0684290-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|1|1|0|681
chr4_4 exon 47602272 47604317 47602272 ID=Msa0684290-mRNA-1:exon:11768;Parent=Msa0684290-mRNA-1
chr4_4 CDS 47602272 47604317 47602272 ID=Msa0684290-mRNA-1:cds;Parent=Msa0684290-mRNA-1
Gene Sequence

>Msa0684290

ATGGATCACACCTTTGGATTTATGGATAACCCTTTTCTTCAACCAGCTCCAAACAATGCTACAGAAGAAGAAGATTCACCTTTGGATGAAATTGATTTCTCTTCCACTGTTCTTCGTTACATTAACCAAATGCTTATGGAAGAAGACATGGATATGAAACCATGTATGTTTCATGATTCATTGGCTTTACAAGCTGCTGAAAAATCATTCTATGAAGTCATTGGTGAGACTTACCCTTCTTCTGTACAAAGCCCTGATGATAGTTTTAACAGTAGTAGTAATTCTGTTGAGGTTGAATCATATTTGAGTAATTTTGATGTTTCTGAGCATAATCCTTCTATATTGCAAACCCATTTTCCTGTTGATTTTGTTTTTCAAGCTACTTCAATGAATGGTAGTAGTAGTAGTAATAGCAGTAGCGATTTCGGTGTAACCGGTGGTGGATTTAAGGATGGATTTCCTGATTCAAATTTGCTTAGTAAGAATGAGTCTGTATTGCAATTTGAGAGGGGTGTGGAGGAAGCTAATAAGTTTCTGCCTAAAGTGAATCCGTTGGTTATTGATTTGGAGAGTAACCCTTTTGTTCCTTCGTTTAGAAGGGAGGTTCAGGAGGTAGTGGTTGAGAGGGAGAGCGATGAAAGGGAACGTTTTTCAGCTGAGTCGAGGGGGAGGAAGAATCACGAGCGAGGAGATGAATTGGGTTTACAAGATGAGAGAAGTAACAAGCAGTCAGCTGTTTATACTGATGATGACAGTGAGCTATCCGAGCTGTTTGATAAGGTGCTGCTTGGAACGGGGTGCAGAAAGGAAGAGAAGGCCAATGGGTCGGATACGAGCGTGCAGCAGAAAGAAGAAGCAAATAATTCTGGTGGTGGAAAGAGCCGTGGTAAGAAACAAGGCAACAAGAAGGGTGTTGTGGATTTGAGGACAATGTTGGTTCTGTGTGCACAATATGTTTCTTCTGATGATCGTGCAAATGCTAATGAGTTATTGAGGCAGATAAGGCAATATTCTTCTCCATTGGGTGATGGATCTCAGAGGCTGGCACATTGCTTTGCGAATGCTCTAGAAGCACGCATGGCTGGTACTGGCACTCAGATTTATACTGCTTTATACTCCAAAAGAAACTCTGCTGCCGACATGGTGAAAGCGTACCAAATGTATATTGAAGCCTGTCCATTCAAGAAGCTTGCATTCATTTTCGCGAACCATACAATTTTGAATCTAGCGAAGGAAGTAGAAACTCTCCACATTGTAGATTTTGGCATCCGTTACGGCTTTCAATGGCCTGCCCTTATTTATCGTTTATCAAAACGACCTGGGGGACCTCCTAAGCTGCTCTTGACAGGGATAGAACTCCCCCAACCTGGCTTCAGGCCTGCCGAGAGAGTCCAGGAGACAGGGCTTCGCCTAGCAAGGTATTGTGAACGTTTTAATGTTCCATTTGAGTTCAATGCTATTGCACAGAAATGGGAAACCATCAAATTTGAGGACTTGAAGATAAAAAAAAATGAACTTCTTGTGGTGAATTCTGTTTGTCGGCTTAAAAATTTACTTGATGAGACAGTTGTGTTAAATAGTCCCAGGGATGCTGTTTTGAAATTAATTAGGGACGCAAATCCCAATATTTTTATACATACTACTGTCAATGGGAGCTACAATGCCCCATTCTTTGCGACACGGTTCAAGGAGGCTCTTTTCAATTACTCTACAATGTTTGATGTGCTTGACATCAATGTTGCTCGTGAAGATCAAACGAGGTTGATGTTTGAGAAAGAGTTCTGGGGGAGGGAAGTAATGAATATTATAGCTTGTGAAGGTTCTCAGAGGGTTGAGAGGCCAGAGACATACAGGAAATGGCAGGTTCGGAATAGAAGGGCTGGATTTAGGCAACTGCCCTTGGATAAACATCTCATTAACAAGTTAAGATGCAAGTTGAAAGATGTGTATCATAGTGATTTCATGCTTGTTGAAGATGGAAACTGCATGCTGCAAGGATGGAAGGGCCGAATAATTTACGCTTCCTCCTGTTGGGTACCTGCATAG
Protein sequence

>Msa0684290

MDHTFGFMDNPFLQPAPNNATEEEDSPLDEIDFSSTVLRYINQMLMEEDMDMKPCMFHDSLALQAAEKSFYEVIGETYPSSVQSPDDSFNSSSNSVEVESYLSNFDVSEHNPSILQTHFPVDFVFQATSMNGSSSSNSSSDFGVTGGGFKDGFPDSNLLSKNESVLQFERGVEEANKFLPKVNPLVIDLESNPFVPSFRREVQEVVVERESDERERFSAESRGRKNHERGDELGLQDERSNKQSAVYTDDDSELSELFDKVLLGTGCRKEEKANGSDTSVQQKEEANNSGGGKSRGKKQGNKKGVVDLRTMLVLCAQYVSSDDRANANELLRQIRQYSSPLGDGSQRLAHCFANALEARMAGTGTQIYTALYSKRNSAADMVKAYQMYIEACPFKKLAFIFANHTILNLAKEVETLHIVDFGIRYGFQWPALIYRLSKRPGGPPKLLLTGIELPQPGFRPAERVQETGLRLARYCERFNVPFEFNAIAQKWETIKFEDLKIKKNELLVVNSVCRLKNLLDETVVLNSPRDAVLKLIRDANPNIFIHTTVNGSYNAPFFATRFKEALFNYSTMFDVLDINVAREDQTRLMFEKEFWGREVMNIIACEGSQRVERPETYRKWQVRNRRAGFRQLPLDKHLINKLRCKLKDVYHSDFMLVEDGNCMLQGWKGRIIYASSCWVPA*