AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0684550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0684550 MtrunA17_Chr3g0117091 90.000 80 8 0 1 80 1 80 5.65e-48 160
Msa0684550 MtrunA17_Chr1g0211161 87.179 78 10 0 3 80 4 81 2.97e-45 150
Msa0684550 MtrunA17_Chr4g0058631 82.278 79 14 0 1 79 1 79 8.58e-42 144
Msa0684550 MtrunA17_Chr5g0421601 72.000 100 21 1 64 156 17 116 1.76e-41 139
Msa0684550 MtrunA17_Chr4g0067291 86.301 73 10 0 84 156 286 358 6.05e-41 142
Msa0684550 MtrunA17_Chr1g0193371 78.481 79 17 0 1 79 1 79 1.54e-38 136
Msa0684550 MtrunA17_Chr7g0271241 78.481 79 17 0 1 79 1 79 2.36e-38 135
Msa0684550 MtrunA17_Chr7g0270891 74.684 79 20 0 1 79 1 79 8.87e-37 131
Msa0684550 MtrunA17_Chr8g0342511 72.152 79 22 0 1 79 1 79 5.84e-36 122
Msa0684550 MtrunA17_Chr1g0193801 74.684 79 20 0 1 79 1 79 6.08e-36 129
Msa0684550 MtrunA17_Chr2g0330041 73.418 79 21 0 1 79 1 79 2.69e-35 128
Msa0684550 MtrunA17_Chr8g0342541 73.418 79 21 0 1 79 1 79 5.24e-35 126
Msa0684550 MtrunA17_Chr8g0342521 72.152 79 22 0 1 79 1 79 3.00e-34 124
Msa0684550 MtrunA17_Chr8g0342531 70.000 80 24 0 1 80 1 80 4.09e-34 119
Msa0684550 MtrunA17_Chr8g0342481 71.250 80 22 1 1 79 1 80 1.04e-32 121
Msa0684550 MtrunA17_Chr8g0342471 67.901 81 25 1 1 80 1 81 1.96e-32 114
Msa0684550 MtrunA17_Chr8g0342461 56.311 103 38 3 1 96 1 103 2.98e-32 114
Msa0684550 MtrunA17_Chr5g0397231 62.025 79 30 0 1 79 1 79 6.96e-31 115
Msa0684550 MtrunA17_Chr8g0387421 62.025 79 30 0 1 79 1 79 2.11e-30 114
Msa0684550 MtrunA17_Chr4g0032401 68.493 73 23 0 7 79 12 84 7.28e-30 112
Msa0684550 MtrunA17_Chr2g0309911 63.750 80 28 1 1 80 1 79 8.52e-30 112
Msa0684550 MtrunA17_Chr3g0131121 61.250 80 31 0 1 80 1 80 2.27e-28 107
Msa0684550 MtrunA17_Chr2g0328771 68.571 70 22 0 12 81 20 89 2.35e-28 108
Msa0684550 MtrunA17_Chr3g0088461 62.195 82 30 1 1 81 10 91 3.17e-28 108
Msa0684550 MtrunA17_Chr8g0385321 62.500 80 30 0 1 80 1 80 1.57e-27 106
Msa0684550 MtrunA17_Chr1g0203441 71.831 71 20 0 9 79 10 80 3.41e-27 104
Msa0684550 MtrunA17_Chr6g0470971 67.606 71 23 0 9 79 11 81 6.91e-26 101
Msa0684550 MtrunA17_Chr5g0435101 54.545 77 35 0 3 79 2 78 9.92e-26 99.0
Msa0684550 MtrunA17_Chr4g0037141 58.228 79 33 0 1 79 1 79 1.72e-25 100
Msa0684550 MtrunA17_Chr4g0042611 56.250 80 35 0 1 80 1 80 2.54e-25 94.4
Msa0684550 MtrunA17_Chr3g0115821 55.000 80 36 0 1 80 1 80 3.56e-25 100
Msa0684550 MtrunA17_Chr6g0453471 58.228 79 33 0 1 79 1 79 1.76e-24 98.6
Msa0684550 MtrunA17_Chr2g0323351 59.155 71 29 0 9 79 9 79 2.57e-24 96.3
Msa0684550 MtrunA17_Chr4g0039971 55.000 80 36 0 1 80 2 81 2.70e-24 98.2
Msa0684550 MtrunA17_Chr4g0042671 58.228 79 33 0 1 79 1 79 3.91e-24 98.2
Msa0684550 MtrunA17_Chr7g0217741 52.941 85 40 0 1 85 1 85 8.92e-24 95.9
Msa0684550 MtrunA17_Chr7g0228891 58.228 79 33 0 1 79 1 79 1.74e-23 94.7
Msa0684550 MtrunA17_Chr3g0110351 56.250 80 35 0 1 80 1 80 2.89e-23 94.7
Msa0684550 MtrunA17_Chr1g0203411 53.165 79 37 0 1 79 1 79 5.88e-23 93.6
Msa0684550 MtrunA17_Chr2g0323411 58.228 79 33 0 1 79 1 79 6.12e-23 94.0
Msa0684550 MtrunA17_Chr2g0281071 57.500 80 33 1 1 79 1 80 6.25e-23 94.4
Msa0684550 MtrunA17_Chr7g0274581 53.165 79 37 0 1 79 1 79 6.29e-23 91.7
Msa0684550 MtrunA17_Chr5g0434571 56.250 80 35 0 1 80 37 116 6.53e-23 94.4
Msa0684550 MtrunA17_Chr4g0022931 52.703 74 35 0 6 79 7 80 1.12e-22 92.4
Msa0684550 MtrunA17_Chr3g0103281 55.696 79 35 0 1 79 1 79 1.15e-22 93.2
Msa0684550 MtrunA17_Chr2g0323321 57.353 68 29 0 12 79 11 78 1.20e-22 88.2
Msa0684550 MtrunA17_Chr5g0395221 55.556 72 32 0 9 80 9 80 1.27e-22 87.4
Msa0684550 MtrunA17_Chr4g0057031 52.500 80 38 0 1 80 1 80 1.32e-22 92.0
Msa0684550 MtrunA17_Chr4g0022901 52.703 74 35 0 6 79 7 80 1.44e-22 92.0
Msa0684550 MtrunA17_Chr1g0187761 56.962 79 34 0 1 79 1 79 1.92e-22 91.7
Msa0684550 MtrunA17_Chr5g0410961 52.500 80 38 0 1 80 1 80 2.21e-22 92.8
Msa0684550 MtrunA17_Chr2g0311221 55.128 78 35 0 2 79 4 81 2.28e-22 92.4
Msa0684550 MtrunA17_Chr7g0261281 52.500 80 38 0 1 80 1 80 2.33e-22 91.7
Msa0684550 MtrunA17_Chr6g0452271 51.899 79 38 0 1 79 1 79 3.21e-22 92.4
Msa0684550 MtrunA17_Chr5g0395281 57.971 69 29 0 12 80 12 80 3.31e-22 91.7
Msa0684550 MtrunA17_Chr4g0048511 56.250 80 34 1 1 79 1 80 5.55e-22 92.0
Msa0684550 MtrunA17_Chr1g0151941 47.778 90 41 2 1 89 1 85 6.22e-22 90.1
Msa0684550 MtrunA17_Chr4g0070641 50.633 79 39 0 1 79 1 79 6.32e-22 88.2
Msa0684550 MtrunA17_Chr4g0070611 50.633 79 39 0 1 79 1 79 1.68e-21 89.7
Msa0684550 MtrunA17_Chr1g0194951 58.228 79 33 0 1 79 1 79 1.69e-21 90.9
Msa0684550 MtrunA17_Chr4g0022911 51.351 74 36 0 6 79 7 80 2.20e-21 89.4
Msa0684550 MtrunA17_Chr4g0068061 56.962 79 34 0 1 79 1 79 5.83e-21 89.0
Msa0684550 MtrunA17_Chr4g0044421 50.000 74 37 0 6 79 6 79 1.03e-20 85.5
Msa0684550 MtrunA17_Chr1g0167691 53.165 79 37 0 1 79 1 79 1.19e-20 86.7
Msa0684550 MtrunA17_Chr2g0294811 50.549 91 43 1 1 91 1 89 1.29e-20 83.2
Msa0684550 MtrunA17_Chr2g0327351 54.430 79 35 1 1 78 1 79 1.42e-20 87.4
Msa0684550 MtrunA17_Chr1g0152011 53.165 79 36 1 1 78 1 79 2.45e-20 87.0
Msa0684550 MtrunA17_Chr4g0028311 53.165 79 36 1 1 78 1 79 3.39e-20 86.7
Msa0684550 MtrunA17_Chr4g0054391 53.165 79 36 1 1 78 1 79 3.70e-20 85.9
Msa0684550 MtrunA17_Chr7g0264641 53.165 79 36 1 1 78 1 79 5.29e-20 85.1
Msa0684550 MtrunA17_Chr1g0167661 53.165 79 37 0 1 79 1 79 5.97e-20 84.7
Msa0684550 MtrunA17_Chr5g0400821 51.899 79 37 1 1 78 1 79 8.54e-20 85.1
Msa0684550 MtrunA17_Chr3g0135311 33.529 170 104 3 1 169 1 162 1.32e-19 85.1
Msa0684550 MtrunA17_Chr8g0349261 54.321 81 35 2 1 79 1 81 1.82e-19 84.3
Msa0684550 MtrunA17_Chr7g0217221 50.000 80 40 0 1 80 1 80 4.25e-19 82.8
Msa0684550 MtrunA17_Chr1g0186061 50.704 71 35 0 9 79 17 87 4.50e-19 82.4
Msa0684550 MtrunA17_Chr8g0346561 50.633 79 39 0 1 79 1 79 5.62e-19 82.8
Msa0684550 MtrunA17_Chr4g0022881 49.296 71 36 0 9 79 9 79 1.10e-18 80.9
Msa0684550 MtrunA17_Chr7g0269831 60.294 68 27 0 1 68 1 68 1.13e-18 82.8
Msa0684550 MtrunA17_Chr1g0168661 48.684 76 39 0 4 79 13 88 1.85e-18 80.9
Msa0684550 MtrunA17_Chr4g0022891 49.296 71 36 0 9 79 9 79 1.89e-18 80.5
Msa0684550 MtrunA17_Chr6g0487491 51.899 79 37 1 1 78 1 79 2.21e-18 80.9
Msa0684550 MtrunA17_Chr4g0072751 49.367 79 39 1 1 78 1 79 2.92e-18 81.6
Msa0684550 MtrunA17_Chr7g0275911 50.633 79 39 0 1 79 1 79 3.13e-18 80.1
Msa0684550 MtrunA17_Chr4g0060721 51.250 80 39 0 1 80 2 81 3.42e-18 81.3
Msa0684550 MtrunA17_Chr5g0417821 52.941 68 32 0 12 79 7 74 4.07e-18 80.5
Msa0684550 MtrunA17_Chr3g0099141 49.296 71 36 0 9 79 37 107 6.10e-18 77.0
Msa0684550 MtrunA17_Chr7g0228231 48.148 81 40 1 1 79 1 81 6.72e-18 78.2
Msa0684550 MtrunA17_Chr1g0180391 52.941 68 32 0 12 79 19 86 1.59e-17 77.8
Msa0684550 MtrunA17_Chr5g0440781 42.529 87 48 1 13 99 13 97 2.17e-17 76.6
Msa0684550 MtrunA17_Chr5g0425591 43.529 85 46 1 13 97 10 92 2.67e-17 73.9
Msa0684550 MtrunA17_Chr6g0453211 48.750 80 41 0 1 80 1 80 2.84e-17 78.6
Msa0684550 MtrunA17_Chr3g0099131 50.725 69 34 0 11 79 40 108 3.11e-17 79.3
Msa0684550 MtrunA17_Chr6g0450101 46.914 81 41 1 1 79 1 81 4.82e-17 76.3
Msa0684550 MtrunA17_Chr3g0121241 50.000 74 37 0 6 79 36 109 6.50e-17 77.4
Msa0684550 MtrunA17_Chr4g0055981 45.070 71 39 0 9 79 52 122 7.12e-17 76.3
Msa0684550 MtrunA17_Chr5g0440761 42.529 87 48 1 13 99 13 97 8.21e-17 76.6
Msa0684550 MtrunA17_Chr5g0441141 42.529 87 48 1 13 99 13 97 8.47e-17 76.6
Msa0684550 MtrunA17_Chr7g0254411 48.750 80 41 0 1 80 1 80 1.04e-16 77.0
Msa0684550 MtrunA17_Chr1g0194291 50.725 69 34 0 12 80 21 89 1.60e-16 75.9
Msa0684550 MtrunA17_Chr3g0092401 48.750 80 41 0 1 80 2 81 1.85e-16 76.3
Msa0684550 MtrunA17_Chr8g0354661 49.254 67 34 0 12 78 37 103 5.44e-16 75.9
Msa0684550 MtrunA17_Chr8g0343831 45.714 70 38 0 10 79 6 75 5.99e-16 73.9
Msa0684550 MtrunA17_Chr1g0209661 47.887 71 37 0 9 79 24 94 7.70e-16 74.3
Msa0684550 MtrunA17_Chr1g0194301 46.377 69 37 0 12 80 33 101 8.02e-16 73.9
Msa0684550 MtrunA17_Chr1g0154031 47.059 68 36 0 12 79 76 143 1.23e-15 74.3
Msa0684550 MtrunA17_Chr3g0080861 47.059 68 36 0 12 79 37 104 1.39e-15 74.7
Msa0684550 MtrunA17_Chr6g0453751 50.685 73 28 1 12 76 20 92 1.47e-15 70.5
Msa0684550 MtrunA17_Chr7g0240821 30.769 182 110 5 17 198 6 171 1.83e-15 72.4
Msa0684550 MtrunA17_Chr1g0192411 47.826 69 36 0 11 79 11 79 5.05e-15 72.8
Msa0684550 MtrunA17_Chr4g0068921 50.000 60 30 0 12 71 24 83 1.81e-14 68.9
Msa0684550 MtrunA17_Chr2g0293911 51.724 58 28 0 11 68 23 80 3.09e-14 70.1
Msa0684550 MtrunA17_Chr8g0360111 47.059 68 36 0 12 79 25 92 6.18e-14 68.6
Msa0684550 MtrunA17_Chr2g0327821 40.278 72 43 0 8 79 2 73 6.33e-14 68.2
Msa0684550 MtrunA17_Chr2g0322521 51.667 60 29 0 12 71 29 88 8.36e-14 69.3
Msa0684550 MtrunA17_Chr5g0434831 50.000 68 34 0 12 79 7 74 1.02e-13 66.6
Msa0684550 MtrunA17_Chr5g0434931 41.026 78 46 0 2 79 25 102 6.69e-13 65.9
Msa0684550 MtrunA17_Chr1g0193901 50.000 60 29 1 10 68 9 68 1.25e-12 62.0
Msa0684550 MtrunA17_Chr1g0193891 50.000 60 29 1 10 68 9 68 1.25e-12 62.0
Msa0684550 MtrunA17_Chr1g0193871 50.000 60 29 1 10 68 9 68 1.25e-12 62.0
Msa0684550 MtrunA17_Chr1g0193881 50.000 60 29 1 10 68 9 68 1.25e-12 62.0
Msa0684550 MtrunA17_Chr7g0220341 45.714 70 36 1 12 79 25 94 1.55e-12 64.7
Msa0684550 MtrunA17_Chr5g0434911 45.588 68 37 0 12 79 21 88 3.72e-12 63.9
Msa0684550 MtrunA17_Chr2g0296001 50.000 74 32 2 88 156 280 353 4.27e-12 63.9
Msa0684550 MtrunA17_Chr7g0228991 45.588 68 37 0 12 79 29 96 4.72e-12 63.5
Msa0684550 MtrunA17_Chr5g0434841 47.059 68 36 0 12 79 20 87 5.00e-12 63.5
Msa0684550 MtrunA17_Chr4g0030881 41.892 74 36 1 13 79 8 81 6.49e-12 62.8
Msa0684550 MtrunA17_Chr8g0334881 42.105 76 44 0 4 79 2 77 1.11e-11 62.8
Msa0684550 MtrunA17_Chr5g0441131 43.939 66 37 0 13 78 10 75 2.85e-11 60.1
Msa0684550 MtrunA17_Chr4g0013361 42.029 69 39 1 12 79 10 78 9.74e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0684550 AT5G26660.1 77.215 79 18 0 1 79 1 79 3.63e-38 135
Msa0684550 AT1G57560.2 75.949 79 19 0 1 79 1 79 1.14e-36 129
Msa0684550 AT1G57560.1 75.949 79 19 0 1 79 1 79 1.25e-36 130
Msa0684550 AT4G01680.3 74.684 79 20 0 1 79 1 79 1.37e-36 128
Msa0684550 AT4G01680.1 74.684 79 20 0 1 79 1 79 5.40e-36 129
Msa0684550 AT1G09540.1 75.949 79 19 0 1 79 1 79 9.44e-36 129
Msa0684550 AT3G13890.2 70.886 79 23 0 1 79 1 79 5.63e-34 124
Msa0684550 AT4G01680.2 64.835 91 20 1 1 79 1 91 1.91e-32 120
Msa0684550 AT3G13890.1 63.636 88 23 1 1 79 1 88 6.33e-31 116
Msa0684550 AT1G63910.1 63.291 79 29 0 1 79 1 79 1.29e-30 115
Msa0684550 AT3G12720.1 63.636 77 28 0 4 80 14 90 1.30e-29 112
Msa0684550 AT5G12870.1 63.889 72 26 0 10 81 16 87 3.10e-26 102
Msa0684550 AT5G65230.1 58.750 80 33 0 1 80 1 80 3.18e-26 102
Msa0684550 AT3G02940.2 55.000 80 36 0 1 80 1 80 2.11e-25 100
Msa0684550 AT2G16720.1 58.228 79 33 0 1 79 1 79 2.62e-25 99.8
Msa0684550 AT3G02940.1 55.000 80 36 0 1 80 1 80 2.92e-25 100
Msa0684550 AT3G02940.3 55.000 80 36 0 1 80 1 80 2.92e-25 100
Msa0684550 AT1G22640.1 56.962 79 34 0 1 79 1 79 3.20e-25 99.4
Msa0684550 AT4G38620.1 59.494 79 32 0 1 79 1 79 4.23e-25 99.4
Msa0684550 AT5G10280.1 56.250 80 35 0 1 80 1 80 5.08e-25 100
Msa0684550 AT4G05100.1 58.750 80 32 1 1 79 1 80 5.46e-25 99.8
Msa0684550 AT3G01140.2 58.228 79 33 0 1 79 1 79 6.82e-25 100
Msa0684550 AT4G34990.1 58.228 79 33 0 1 79 1 79 7.22e-25 98.6
Msa0684550 AT3G08500.1 65.714 70 24 0 9 78 27 96 1.27e-24 99.4
Msa0684550 AT4G09460.1 56.962 79 34 0 1 79 1 79 1.29e-24 97.1
Msa0684550 AT1G34670.1 55.000 80 36 0 1 80 1 80 1.86e-24 99.0
Msa0684550 AT3G28470.1 55.696 79 35 0 1 79 1 79 1.93e-24 98.2
Msa0684550 AT5G16770.4 52.500 80 38 0 1 80 1 80 3.20e-24 97.8
Msa0684550 AT5G16770.3 52.500 80 38 0 1 80 1 80 3.20e-24 97.8
Msa0684550 AT4G28110.1 52.941 85 40 0 1 85 1 85 3.51e-24 97.1
Msa0684550 AT5G16770.1 52.500 80 38 0 1 80 1 80 3.88e-24 97.8
Msa0684550 AT5G16770.2 52.500 80 38 0 1 80 1 80 3.88e-24 97.8
Msa0684550 AT5G15310.4 56.962 79 34 0 1 79 1 79 5.43e-24 95.9
Msa0684550 AT2G31180.1 55.000 80 36 0 1 80 1 80 6.53e-24 95.5
Msa0684550 AT5G15310.1 56.962 79 34 0 1 79 1 79 6.96e-24 97.1
Msa0684550 AT5G15310.2 56.962 79 34 0 1 79 1 79 7.54e-24 96.7
Msa0684550 AT3G48920.1 56.944 72 31 0 9 80 15 86 1.00e-23 95.5
Msa0684550 AT4G21440.1 56.962 79 34 0 1 79 1 79 1.13e-23 96.7
Msa0684550 AT5G54230.1 56.962 79 34 0 1 79 1 79 1.39e-23 95.9
Msa0684550 AT1G79180.1 56.471 85 33 1 2 82 4 88 1.48e-23 95.5
Msa0684550 AT1G56160.1 56.250 80 35 0 2 81 4 83 3.15e-23 94.7
Msa0684550 AT1G74430.1 56.790 81 35 0 1 81 1 81 3.66e-23 94.0
Msa0684550 AT4G25560.1 59.722 72 29 0 10 81 8 79 3.83e-23 94.4
Msa0684550 AT4G12350.1 53.750 80 37 0 1 80 1 80 4.42e-23 94.0
Msa0684550 AT4G22680.1 53.750 80 37 0 1 80 1 80 4.44e-23 93.6
Msa0684550 AT1G35515.1 52.273 88 40 1 1 88 1 86 4.77e-23 92.4
Msa0684550 AT5G56110.1 39.695 131 71 1 1 131 1 123 5.33e-23 94.4
Msa0684550 AT3G01140.1 58.108 74 31 0 6 79 49 122 7.63e-23 95.1
Msa0684550 AT5G16600.1 56.250 80 35 0 1 80 1 80 9.67e-23 94.0
Msa0684550 AT1G06180.1 56.962 79 34 0 1 79 1 79 1.16e-22 92.0
Msa0684550 AT5G52260.1 68.254 63 20 0 9 71 9 71 2.04e-22 92.0
Msa0684550 AT4G17785.1 57.500 80 33 1 1 79 1 80 2.27e-22 93.2
Msa0684550 AT5G14340.1 56.962 79 34 0 1 79 13 91 2.49e-22 92.0
Msa0684550 AT5G60890.1 50.633 79 39 0 1 79 1 79 2.80e-22 92.0
Msa0684550 AT4G17785.2 57.500 80 33 1 1 79 1 80 2.82e-22 92.8
Msa0684550 AT1G66230.1 55.000 80 36 0 1 80 1 80 2.97e-22 91.7
Msa0684550 AT5G07690.1 48.864 88 40 1 1 88 1 83 4.57e-22 92.0
Msa0684550 AT1G74080.1 47.727 88 44 1 1 88 1 86 7.88e-22 91.7
Msa0684550 AT3G61250.1 53.750 80 37 0 1 80 1 80 8.00e-22 90.9
Msa0684550 AT5G61420.2 47.727 88 41 1 1 88 1 83 8.37e-22 92.0
Msa0684550 AT1G18570.1 48.193 83 41 1 6 88 7 87 9.36e-22 91.7
Msa0684550 AT2G47460.1 54.430 79 36 0 1 79 1 79 2.73e-21 90.5
Msa0684550 AT3G23250.1 50.633 79 39 0 1 79 1 79 5.33e-21 88.6
Msa0684550 AT5G07700.1 48.837 86 38 2 3 88 4 83 9.17e-21 88.6
Msa0684550 AT5G07700.2 48.837 86 38 2 3 88 4 83 9.17e-21 88.6
Msa0684550 AT3G62610.1 53.165 79 37 0 1 79 1 79 1.39e-20 88.2
Msa0684550 AT5G23000.1 54.430 79 35 1 1 78 1 79 1.78e-20 87.8
Msa0684550 AT5G49330.1 56.962 79 34 0 1 79 1 79 2.38e-20 87.4
Msa0684550 AT1G16490.1 53.846 78 36 0 2 79 4 81 3.11e-20 86.3
Msa0684550 AT5G65790.1 51.852 81 38 1 1 80 1 81 6.12e-20 86.7
Msa0684550 AT3G12820.1 50.602 83 39 1 6 88 8 88 6.65e-20 84.7
Msa0684550 AT5G57620.1 51.250 80 38 1 1 79 1 80 7.81e-20 86.3
Msa0684550 AT1G18710.1 55.882 68 30 0 12 79 12 79 1.19e-19 84.7
Msa0684550 AT5G62320.1 48.837 86 37 1 2 80 3 88 2.15e-19 83.6
Msa0684550 AT3G49690.1 51.899 79 37 1 1 78 1 79 2.58e-19 84.3
Msa0684550 AT2G36890.1 49.367 79 39 1 1 78 1 79 6.84e-19 83.2
Msa0684550 AT2G36890.2 47.191 89 41 2 1 88 42 125 8.99e-19 83.2
Msa0684550 AT5G14750.1 49.254 67 34 0 13 79 17 83 1.76e-18 80.1
Msa0684550 AT3G01530.1 52.941 68 32 0 12 79 25 92 2.75e-18 79.7
Msa0684550 AT3G24310.1 50.000 72 36 0 8 79 14 85 4.20e-18 80.5
Msa0684550 AT5G62470.2 51.250 80 39 0 1 80 1 80 4.48e-18 81.3
Msa0684550 AT5G35550.1 49.296 71 36 0 9 79 11 81 4.98e-18 80.1
Msa0684550 AT3G47600.1 50.000 80 40 0 1 80 1 80 5.95e-18 80.9
Msa0684550 AT4G13480.1 51.389 72 35 0 8 79 2 73 7.45e-18 79.7
Msa0684550 AT5G40330.1 45.070 71 39 0 9 79 9 79 1.28e-17 78.2
Msa0684550 AT1G74650.1 50.000 80 40 0 1 80 1 80 1.48e-17 79.7
Msa0684550 AT4G37780.1 50.000 80 38 2 1 79 1 79 1.61e-17 79.3
Msa0684550 AT1G79180.2 39.831 118 34 2 2 82 4 121 3.51e-17 78.6
Msa0684550 AT5G40350.1 52.308 65 31 0 11 75 16 80 3.75e-17 77.0
Msa0684550 AT3G27810.1 50.746 67 33 0 9 75 17 83 4.33e-17 77.0
Msa0684550 AT3G27920.1 44.286 70 39 0 10 79 12 81 5.45e-17 76.6
Msa0684550 AT1G48000.1 52.308 65 31 0 11 75 31 95 7.34e-17 76.6
Msa0684550 AT5G52600.1 46.479 71 38 0 9 79 9 79 8.00e-17 75.9
Msa0684550 AT5G06100.1 46.053 76 41 0 10 85 30 105 1.40e-16 77.8
Msa0684550 AT3G13540.1 48.649 74 38 0 6 79 17 90 1.41e-16 75.9
Msa0684550 AT1G08810.1 50.000 80 40 0 1 80 1 80 1.58e-16 76.3
Msa0684550 AT5G06100.5 46.053 76 41 0 10 85 30 105 1.73e-16 77.4
Msa0684550 AT5G06100.2 46.053 76 41 0 10 85 30 105 1.73e-16 77.4
Msa0684550 AT5G06100.3 46.053 76 41 0 10 85 30 105 1.73e-16 77.4
Msa0684550 AT5G06100.4 46.053 76 41 0 10 85 30 105 1.73e-16 77.4
Msa0684550 AT2G26960.1 43.836 73 41 0 7 79 15 87 1.97e-16 77.4
Msa0684550 AT5G62470.1 51.250 80 38 1 1 80 1 79 2.12e-16 76.6
Msa0684550 AT3G30210.1 50.000 76 36 1 13 88 28 101 2.94e-16 75.5
Msa0684550 AT3G11440.2 45.946 74 40 0 12 85 41 114 5.59e-16 75.9
Msa0684550 AT3G11440.3 45.946 74 40 0 12 85 41 114 6.00e-16 75.9
Msa0684550 AT3G11440.4 45.946 74 40 0 12 85 41 114 6.00e-16 75.9
Msa0684550 AT3G11440.1 45.946 74 40 0 12 85 41 114 6.00e-16 75.9
Msa0684550 AT3G28910.1 49.333 75 38 0 6 80 6 80 8.04e-16 74.7
Msa0684550 AT3G06490.1 57.895 57 24 0 12 68 19 75 1.18e-15 74.3
Msa0684550 AT1G68320.1 49.296 71 36 0 9 79 16 86 1.49e-15 73.6
Msa0684550 AT1G66380.2 53.968 63 29 0 12 74 8 70 1.49e-15 70.1
Msa0684550 AT5G55020.1 48.529 68 35 0 12 79 26 93 4.48e-15 73.6
Msa0684550 AT1G66380.1 53.968 63 29 0 12 74 8 70 5.39e-15 69.3
Msa0684550 AT2G47190.1 37.079 89 53 2 11 99 19 104 1.20e-14 70.9
Msa0684550 AT4G26930.1 47.059 68 36 0 12 79 19 86 1.58e-14 71.6
Msa0684550 AT2G32460.1 46.377 69 37 0 12 80 18 86 1.65e-14 71.6
Msa0684550 AT1G25340.1 50.746 67 33 0 13 79 19 85 1.68e-14 70.9
Msa0684550 AT2G32460.2 46.377 69 37 0 12 80 6 74 1.78e-14 71.6
Msa0684550 AT3G53200.1 45.000 80 42 2 9 88 6 83 4.84e-14 68.9
Msa0684550 AT5G59780.3 43.056 72 41 0 8 79 4 75 6.37e-14 68.6
Msa0684550 AT1G56650.1 52.381 63 30 0 12 74 8 70 6.71e-14 68.6
Msa0684550 AT5G49620.1 45.588 68 35 1 3 68 15 82 1.31e-13 68.6
Msa0684550 AT5G49620.2 45.588 68 35 1 3 68 15 82 1.47e-13 68.6
Msa0684550 AT1G66390.1 52.381 63 30 0 12 74 8 70 2.72e-13 67.0
Msa0684550 AT3G60460.1 40.506 79 46 1 3 80 2 80 3.51e-13 67.4
Msa0684550 AT3G46130.1 44.776 67 37 0 13 79 10 76 4.61e-13 66.6
Msa0684550 AT5G26660.2 77.143 35 8 0 45 79 14 48 2.89e-12 64.7
Msa0684550 AT1G66370.1 45.588 68 37 0 12 79 8 75 6.69e-12 63.2
Msa0684550 AT2G26950.1 32.911 79 53 0 1 79 5 83 1.81e-11 62.8

Find 43 sgRNAs with CRISPR-Local

Find 143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGAATATATTGTTAATTA+TGG 0.132519 4_4:+47926823 Msa0684550:CDS
CTTGCAGATGGCCATTGTTT+TGG 0.203500 4_4:+47927688 Msa0684550:CDS
GAGTTCTTCGGTGATGAAAA+TGG 0.262327 4_4:+47927027 Msa0684550:CDS
TTCAATTACATAACGATGTT+TGG 0.314366 4_4:+47925282 Msa0684550:CDS
TTAATATTACCAGCTAGTTT+AGG 0.344561 4_4:-47925327 None:intergenic
TTGATTCCCTTTGAGTTCTT+CGG 0.364077 4_4:+47927015 Msa0684550:CDS
AACATTCCTCTCTTCAAATC+AGG 0.399385 4_4:-47925527 None:intergenic
TTTGCTTTAAAGAACAGAAA+TGG 0.411738 4_4:-47925215 None:intergenic
AGAAACATGTTATCCTCCTT+TGG 0.416553 4_4:+47926864 Msa0684550:CDS
GGTGTAGATTGAAACTGATA+AGG 0.423427 4_4:-47926991 None:intergenic
TAAGATGGATAAACTATTTG+AGG 0.436802 4_4:+47925504 Msa0684550:CDS
GCGGCTTGCCTTCTTGCAGA+TGG 0.464795 4_4:+47927676 Msa0684550:CDS
GACAAGATTGCGGTATTTGA+AGG 0.475325 4_4:-47927425 None:intergenic
TGTTCAGTTCCTAAACTAGC+TGG 0.486303 4_4:+47925318 Msa0684550:CDS
TACATAACGATGTTTGGTGT+TGG 0.488740 4_4:+47925288 Msa0684550:CDS
TCATCACCGAAGAACTCAAA+GGG 0.500565 4_4:-47927021 None:intergenic
GAAAGAGTTGTATATTAAGA+TGG 0.503727 4_4:+47925489 Msa0684550:CDS
GGCCACTGTAATAATGTTCA+AGG 0.508867 4_4:+47927487 Msa0684550:CDS
TCGGTGATGAAAATGGAAAC+GGG 0.508933 4_4:+47927034 Msa0684550:CDS
TTCGGTGATGAAAATGGAAA+CGG 0.515147 4_4:+47927033 Msa0684550:CDS
TTGAGGCCTGATTTGAAGAG+AGG 0.529236 4_4:+47925521 Msa0684550:CDS
GTGTAGATTGAAACTGATAA+GGG 0.544319 4_4:-47926990 None:intergenic
TATGTATTGCAGGGTTGCAA+AGG 0.544814 4_4:+47925462 Msa0684550:intron
AACAATGGCCATCTGCAAGA+AGG 0.547869 4_4:-47927684 None:intergenic
TCATTACCCTACATGTGTGC+AGG 0.552880 4_4:+47926955 Msa0684550:CDS
ATTATGTCCCATGGGAACAA+TGG 0.554058 4_4:+47926909 Msa0684550:CDS
TAAGTTACATATTGTACCAA+AGG 0.558078 4_4:-47926880 None:intergenic
AGGACAATCCATTGTTCCCA+TGG 0.561451 4_4:-47926917 None:intergenic
ATCAAAGCCTGCACACATGT+AGG 0.562123 4_4:-47926962 None:intergenic
TTCATCACCGAAGAACTCAA+AGG 0.574097 4_4:-47927022 None:intergenic
AATGACGGAACATAATAAGA+AGG 0.575415 4_4:-47926937 None:intergenic
AAGAACTCAAAGGGAATCAA+AGG 0.577254 4_4:-47927012 None:intergenic
TCAAAGCCTGCACACATGTA+GGG 0.588146 4_4:-47926961 None:intergenic
TACAACAGATTATGTCCCAT+GGG 0.611088 4_4:+47926901 Msa0684550:CDS
GAGATTCAAGGCCAAAACAA+TGG 0.619136 4_4:-47927699 None:intergenic
AGGAATGTTCTCAAAACAAG+AGG 0.619853 4_4:+47925541 Msa0684550:CDS
GCACACATGTAGGGTAATGA+CGG 0.622031 4_4:-47926952 None:intergenic
TTACAACAGATTATGTCCCA+TGG 0.627593 4_4:+47926900 Msa0684550:CDS
TACCTTGAACATTATTACAG+TGG 0.634365 4_4:-47927489 None:intergenic
GGACAATCCATTGTTCCCAT+GGG 0.638377 4_4:-47926916 None:intergenic
GTTACATATTGTACCAAAGG+AGG 0.654447 4_4:-47926877 None:intergenic
ATTGCAGGGTTGCAAAGGTG+TGG 0.661088 4_4:+47925467 Msa0684550:intron
GTATATAGGAGACAAGATTG+CGG 0.736798 4_4:-47927435 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCATTAGTAAATAAAAA+TGG + chr4_4:47926219-47926238 Msa0684550:intron 10.0%
!! TTGTAAAGTAAAAAAAGATA+AGG - chr4_4:47925402-47925421 None:intergenic 15.0%
!! CAATGAAATAAATAAAGAAT+GGG - chr4_4:47926744-47926763 None:intergenic 15.0%
!! TAACATGATTATAATATTTC+AGG + chr4_4:47927393-47927412 Msa0684550:intron 15.0%
!! TTAAAGCAAAAACTAAGAAA+AGG + chr4_4:47925228-47925247 Msa0684550:CDS 20.0%
!! AAAAACTAAGAAAAGGTTTA+TGG + chr4_4:47925235-47925254 Msa0684550:CDS 20.0%
!!! TTAATGAGATAAAACACTTT+TGG + chr4_4:47925676-47925695 Msa0684550:intron 20.0%
!! CAATAATGAATCTCTTATAA+AGG + chr4_4:47925764-47925783 Msa0684550:intron 20.0%
!! TTCTTTAAATTTATGCTTTC+AGG + chr4_4:47926247-47926266 Msa0684550:intron 20.0%
!!! CTTAAAGATACATTTTATGA+TGG + chr4_4:47926400-47926419 Msa0684550:intron 20.0%
!! AACAAAATTCTAACTTCATA+GGG - chr4_4:47926689-47926708 None:intergenic 20.0%
!! CCAATGAAATAAATAAAGAA+TGG - chr4_4:47926745-47926764 None:intergenic 20.0%
!!! CCATTCTTTATTTATTTCAT+TGG + chr4_4:47926742-47926761 Msa0684550:intron 20.0%
!! CGTGAATATATTGTTAATTA+TGG + chr4_4:47926823-47926842 Msa0684550:CDS 20.0%
!! TTCAATGGAAAAATAAAACA+AGG + chr4_4:47927304-47927323 Msa0684550:intron 20.0%
!! GTAAAAATGACATAGTATAT+AGG - chr4_4:47927452-47927471 None:intergenic 20.0%
!! AATGTAAAGTTGAAAAACTT+TGG - chr4_4:47927622-47927641 None:intergenic 20.0%
!!! TTTGCTTTAAAGAACAGAAA+TGG - chr4_4:47925218-47925237 None:intergenic 25.0%
! TTCAATTACATAACGATGTT+TGG + chr4_4:47925282-47925301 Msa0684550:CDS 25.0%
!! TTAATATTACCAGCTAGTTT+AGG - chr4_4:47925330-47925349 None:intergenic 25.0%
!!! TCACTTTTTTATGTATTGCA+GGG + chr4_4:47925453-47925472 Msa0684550:intron 25.0%
! GAAAGAGTTGTATATTAAGA+TGG + chr4_4:47925489-47925508 Msa0684550:CDS 25.0%
! TAAGATGGATAAACTATTTG+AGG + chr4_4:47925504-47925523 Msa0684550:CDS 25.0%
! TTAAATGTTCAAGCATGTTA+TGG + chr4_4:47925642-47925661 Msa0684550:intron 25.0%
! AAGAAGAAACTAATGAAACA+AGG + chr4_4:47925711-47925730 Msa0684550:intron 25.0%
! AGAAGAAACTAATGAAACAA+GGG + chr4_4:47925712-47925731 Msa0684550:intron 25.0%
! AGAGATTCATTATTGATGAA+GGG - chr4_4:47925759-47925778 None:intergenic 25.0%
! AAGAGATTCATTATTGATGA+AGG - chr4_4:47925760-47925779 None:intergenic 25.0%
! CTATGTATGTAGTGAATAAA+TGG + chr4_4:47926025-47926044 Msa0684550:intron 25.0%
! AATGCAATACATTACATACA+TGG - chr4_4:47926563-47926582 None:intergenic 25.0%
! CAACAAAATTCTAACTTCAT+AGG - chr4_4:47926690-47926709 None:intergenic 25.0%
! TAAGTTACATATTGTACCAA+AGG - chr4_4:47926883-47926902 None:intergenic 25.0%
! TGAAAAAACAACGAAAGAAA+AGG - chr4_4:47927080-47927099 None:intergenic 25.0%
! AATCAATCAAAGAACACTAA+AGG - chr4_4:47927114-47927133 None:intergenic 25.0%
! CATTAATGTTGCTAGATTAA+TGG + chr4_4:47927193-47927212 Msa0684550:intron 25.0%
!!! TGAGTGATTTGTTGTATTAT+GGG + chr4_4:47927239-47927258 Msa0684550:intron 25.0%
!! TTTTCCATTGAATACGATTA+AGG - chr4_4:47927296-47927315 None:intergenic 25.0%
! TTAGTGAAGCATAATTGATT+TGG - chr4_4:47927376-47927395 None:intergenic 25.0%
!! TTTTACAACACTTGCAATAT+TGG + chr4_4:47927466-47927485 Msa0684550:CDS 25.0%
! CATAAATTGCAAAAACTTGT+AGG - chr4_4:47927518-47927537 None:intergenic 25.0%
!! CAAGTTTTTGCAATTTATGT+CGG + chr4_4:47927519-47927538 Msa0684550:intron 25.0%
! ATATATGTTGAAATTGCAGA+TGG + chr4_4:47927654-47927673 Msa0684550:intron 25.0%
!! AAAGCTTCTCATCTTTTTCA+GGG - chr4_4:47925263-47925282 None:intergenic 30.0%
! AAAAGCTTCTCATCTTTTTC+AGG - chr4_4:47925264-47925283 None:intergenic 30.0%
!!! CTCACTTTTTTATGTATTGC+AGG + chr4_4:47925452-47925471 Msa0684550:intron 30.0%
ATCTCTTATAAAGGAAGAGA+AGG + chr4_4:47925773-47925792 Msa0684550:intron 30.0%
AATATGAGAATGAGTCTTAG+AGG + chr4_4:47925951-47925970 Msa0684550:intron 30.0%
ATATGAGAATGAGTCTTAGA+GGG + chr4_4:47925952-47925971 Msa0684550:intron 30.0%
!! TTTTGATTATGTGTGAACCT+GGG + chr4_4:47926072-47926091 Msa0684550:intron 30.0%
AATGCAAAAAACAAAGTGGT+TGG + chr4_4:47926114-47926133 Msa0684550:intron 30.0%
!! CTGGAGTACTTTAACTTTTT+AGG + chr4_4:47926312-47926331 Msa0684550:intron 30.0%
!! AACTTTTTAGGCATGTGATT+AGG + chr4_4:47926324-47926343 Msa0684550:intron 30.0%
!! TTGACGGTTTGTTCAAATTT+TGG - chr4_4:47926503-47926522 None:intergenic 30.0%
! AATGACGGAACATAATAAGA+AGG - chr4_4:47926940-47926959 None:intergenic 30.0%
GTGTAGATTGAAACTGATAA+GGG - chr4_4:47926993-47927012 None:intergenic 30.0%
!! CTGAGTGATTTGTTGTATTA+TGG + chr4_4:47927238-47927257 Msa0684550:intron 30.0%
! TTAAGGCGTCAATATGAAAA+AGG - chr4_4:47927279-47927298 None:intergenic 30.0%
TACCTTGAACATTATTACAG+TGG - chr4_4:47927492-47927511 None:intergenic 30.0%
AAATTGCAAAAACTTGTAGG+CGG - chr4_4:47927515-47927534 None:intergenic 30.0%
ACATTTCAAATTATGCTTGC+AGG + chr4_4:47927586-47927605 Msa0684550:intron 30.0%
!!! AAGCTTCTCATCTTTTTCAG+GGG - chr4_4:47925262-47925281 None:intergenic 35.0%
!! TACATAACGATGTTTGGTGT+TGG + chr4_4:47925288-47925307 Msa0684550:CDS 35.0%
AACATTCCTCTCTTCAAATC+AGG - chr4_4:47925530-47925549 None:intergenic 35.0%
AGGAATGTTCTCAAAACAAG+AGG + chr4_4:47925541-47925560 Msa0684550:CDS 35.0%
! TTCATGAAGCACTTGCAAAT+AGG + chr4_4:47925583-47925602 Msa0684550:intron 35.0%
AAGGAAGAGAAGGAAAATTC+AGG + chr4_4:47925783-47925802 Msa0684550:intron 35.0%
GTTTACCTTAGATAAATCCC+AGG + chr4_4:47925824-47925843 Msa0684550:intron 35.0%
AGAAACCTGGGATTTATCTA+AGG - chr4_4:47925832-47925851 None:intergenic 35.0%
TCAACCTCAAATAACTGAGT+TGG - chr4_4:47925883-47925902 None:intergenic 35.0%
!! ATGTGAAGTGTTGCAATGTT+TGG + chr4_4:47926049-47926068 Msa0684550:intron 35.0%
!!! GTTTTGATTATGTGTGAACC+TGG + chr4_4:47926071-47926090 Msa0684550:intron 35.0%
!!! CTTTGTTTTTTGCATTGTCC+AGG - chr4_4:47926110-47926129 None:intergenic 35.0%
GGACAATGCAAAAAACAAAG+TGG + chr4_4:47926110-47926129 Msa0684550:intron 35.0%
!! TAGTATAAGTTGATGCCTTC+AGG + chr4_4:47926183-47926202 Msa0684550:intron 35.0%
AACCTTTGTGAATATCCTGA+AGG - chr4_4:47926201-47926220 None:intergenic 35.0%
TATGCTTTCAGGACTTCATA+AGG + chr4_4:47926258-47926277 Msa0684550:intron 35.0%
! GACTTCATAAGGTTTTCCTA+TGG + chr4_4:47926269-47926288 Msa0684550:intron 35.0%
! AGTTAAAGTACTCCAGTCAA+AGG - chr4_4:47926308-47926327 None:intergenic 35.0%
TGATCTGCGATTGACAAAAT+TGG + chr4_4:47926529-47926548 Msa0684550:intron 35.0%
! TTTGAAGCAGATAGGATTGA+TGG + chr4_4:47926639-47926658 Msa0684550:intron 35.0%
TTGAAGCAGATAGGATTGAT+GGG + chr4_4:47926640-47926659 Msa0684550:intron 35.0%
CATTGGATGTCATAGAATTG+CGG + chr4_4:47926759-47926778 Msa0684550:intron 35.0%
AGAAACATGTTATCCTCCTT+TGG + chr4_4:47926864-47926883 Msa0684550:CDS 35.0%
GTTACATATTGTACCAAAGG+AGG - chr4_4:47926880-47926899 None:intergenic 35.0%
TTACAACAGATTATGTCCCA+TGG + chr4_4:47926900-47926919 Msa0684550:CDS 35.0%
TACAACAGATTATGTCCCAT+GGG + chr4_4:47926901-47926920 Msa0684550:CDS 35.0%
GGTGTAGATTGAAACTGATA+AGG - chr4_4:47926994-47927013 None:intergenic 35.0%
AAGAACTCAAAGGGAATCAA+AGG - chr4_4:47927015-47927034 None:intergenic 35.0%
! TTGATTCCCTTTGAGTTCTT+CGG + chr4_4:47927015-47927034 Msa0684550:CDS 35.0%
TTCGGTGATGAAAATGGAAA+CGG + chr4_4:47927033-47927052 Msa0684550:CDS 35.0%
TGTTGCTAGATTAATGGTAC+TGG + chr4_4:47927199-47927218 Msa0684550:intron 35.0%
ACAACAAATCACTCAGTCAA+GGG - chr4_4:47927234-47927253 None:intergenic 35.0%
TACAACAAATCACTCAGTCA+AGG - chr4_4:47927235-47927254 None:intergenic 35.0%
GTATATAGGAGACAAGATTG+CGG - chr4_4:47927438-47927457 None:intergenic 35.0%
CAAATTATGCTTGCAGGATT+CGG + chr4_4:47927592-47927611 Msa0684550:intron 35.0%
TATGTTGAAATTGCAGATGG+CGG + chr4_4:47927657-47927676 Msa0684550:intron 35.0%
TGTTCAGTTCCTAAACTAGC+TGG + chr4_4:47925318-47925337 Msa0684550:CDS 40.0%
TATGTATTGCAGGGTTGCAA+AGG + chr4_4:47925462-47925481 Msa0684550:intron 40.0%
ATGAAGGGTTTATGTGTAGC+TGG - chr4_4:47925744-47925763 None:intergenic 40.0%
TGGTCCAACTCAGTTATTTG+AGG + chr4_4:47925876-47925895 Msa0684550:intron 40.0%
GCAAAAAACAAAGTGGTTGG+TGG + chr4_4:47926117-47926136 Msa0684550:intron 40.0%
TGCCTTCAGGATATTCACAA+AGG + chr4_4:47926196-47926215 Msa0684550:intron 40.0%
TCGCAGATCACGTAAATTGA+CGG - chr4_4:47926519-47926538 None:intergenic 40.0%
! TATTGCATTTTGTCGTTCGC+AGG + chr4_4:47926574-47926593 Msa0684550:intron 40.0%
ATTATGTCCCATGGGAACAA+TGG + chr4_4:47926909-47926928 Msa0684550:CDS 40.0%
TCATCACCGAAGAACTCAAA+GGG - chr4_4:47927024-47927043 None:intergenic 40.0%
TTCATCACCGAAGAACTCAA+AGG - chr4_4:47927025-47927044 None:intergenic 40.0%
GAGTTCTTCGGTGATGAAAA+TGG + chr4_4:47927027-47927046 Msa0684550:CDS 40.0%
TCGGTGATGAAAATGGAAAC+GGG + chr4_4:47927034-47927053 Msa0684550:CDS 40.0%
AACAAATCACTCAGTCAAGG+GGG - chr4_4:47927232-47927251 None:intergenic 40.0%
CAACAAATCACTCAGTCAAG+GGG - chr4_4:47927233-47927252 None:intergenic 40.0%
GACGCCTTAATCGTATTCAA+TGG + chr4_4:47927289-47927308 Msa0684550:intron 40.0%
GACAAGATTGCGGTATTTGA+AGG - chr4_4:47927428-47927447 None:intergenic 40.0%
GGCCACTGTAATAATGTTCA+AGG + chr4_4:47927487-47927506 Msa0684550:CDS 40.0%
ATGTCGGATGCATATGTTAC+TGG + chr4_4:47927535-47927554 Msa0684550:intron 40.0%
! TTGAGGCCTGATTTGAAGAG+AGG + chr4_4:47925521-47925540 Msa0684550:CDS 45.0%
!! ATCCCAGGTTTCTGTTTCTG+AGG + chr4_4:47925839-47925858 Msa0684550:intron 45.0%
CACCTCAGAAACAGAAACCT+GGG - chr4_4:47925844-47925863 None:intergenic 45.0%
ACACCTCAGAAACAGAAACC+TGG - chr4_4:47925845-47925864 None:intergenic 45.0%
!!! CTGAGGTGTCGTCATTGTTT+TGG + chr4_4:47925856-47925875 Msa0684550:intron 45.0%
TTCTTGTCTGCTACTCTTGC+TGG - chr4_4:47925933-47925952 None:intergenic 45.0%
TTATGTGTGAACCTGGGAGT+AGG + chr4_4:47926078-47926097 Msa0684550:intron 45.0%
!! AAAACAAAGTGGTTGGTGGC+TGG + chr4_4:47926121-47926140 Msa0684550:intron 45.0%
CGCGTTAGTGATTTGACGTT+CGG + chr4_4:47926610-47926629 Msa0684550:intron 45.0%
TAGTGATTTGACGTTCGGAG+TGG + chr4_4:47926615-47926634 Msa0684550:intron 45.0%
! GGAGTGGATTTGAAGCAGAT+AGG + chr4_4:47926631-47926650 Msa0684550:intron 45.0%
AGGATTGATGGGAATACTGC+AGG + chr4_4:47926651-47926670 Msa0684550:intron 45.0%
GGACAATCCATTGTTCCCAT+GGG - chr4_4:47926919-47926938 None:intergenic 45.0%
AGGACAATCCATTGTTCCCA+TGG - chr4_4:47926920-47926939 None:intergenic 45.0%
GCACACATGTAGGGTAATGA+CGG - chr4_4:47926955-47926974 None:intergenic 45.0%
TCATTACCCTACATGTGTGC+AGG + chr4_4:47926955-47926974 Msa0684550:CDS 45.0%
TCAAAGCCTGCACACATGTA+GGG - chr4_4:47926964-47926983 None:intergenic 45.0%
ATCAAAGCCTGCACACATGT+AGG - chr4_4:47926965-47926984 None:intergenic 45.0%
TTATGCTTGCAGGATTCGGA+TGG + chr4_4:47927596-47927615 Msa0684550:intron 45.0%
AACAATGGCCATCTGCAAGA+AGG - chr4_4:47927687-47927706 None:intergenic 45.0%
! CTTGCAGATGGCCATTGTTT+TGG + chr4_4:47927688-47927707 Msa0684550:CDS 45.0%
ATTGCAGGGTTGCAAAGGTG+TGG + chr4_4:47925467-47925486 Msa0684550:intron 50.0%
!! AGGCACTGAGATCACACCAT+AGG - chr4_4:47926288-47926307 None:intergenic 50.0%
GTGATCTCAGTGCCTTTGAC+TGG + chr4_4:47926293-47926312 Msa0684550:intron 50.0%
! TGCATTTTGTCGTTCGCAGG+AGG + chr4_4:47926577-47926596 Msa0684550:intron 50.0%
CCAGGTCAACTCCTACTCCC+AGG - chr4_4:47926092-47926111 None:intergenic 60.0%
CCTGGGAGTAGGAGTTGACC+TGG + chr4_4:47926089-47926108 Msa0684550:intron 60.0%
GCGGCTTGCCTTCTTGCAGA+TGG + chr4_4:47927676-47927695 Msa0684550:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 47925207 47927716 47925207 ID=Msa0684550;Name=Msa0684550
chr4_4 mRNA 47925207 47927716 47925207 ID=Msa0684550-mRNA-1;Parent=Msa0684550;Name=Msa0684550-mRNA-1;_AED=0.46;_eAED=0.49;_QI=0|0|0|1|0.5|0.6|5|0|206
chr4_4 exon 47925207 47925339 47925207 ID=Msa0684550-mRNA-1:exon:11859;Parent=Msa0684550-mRNA-1
chr4_4 exon 47925474 47925562 47925474 ID=Msa0684550-mRNA-1:exon:11860;Parent=Msa0684550-mRNA-1
chr4_4 exon 47926823 47927070 47926823 ID=Msa0684550-mRNA-1:exon:11861;Parent=Msa0684550-mRNA-1
chr4_4 exon 47927415 47927521 47927415 ID=Msa0684550-mRNA-1:exon:11862;Parent=Msa0684550-mRNA-1
chr4_4 exon 47927673 47927716 47927673 ID=Msa0684550-mRNA-1:exon:11863;Parent=Msa0684550-mRNA-1
chr4_4 CDS 47925207 47925339 47925207 ID=Msa0684550-mRNA-1:cds;Parent=Msa0684550-mRNA-1
chr4_4 CDS 47925474 47925562 47925474 ID=Msa0684550-mRNA-1:cds;Parent=Msa0684550-mRNA-1
chr4_4 CDS 47926823 47927070 47926823 ID=Msa0684550-mRNA-1:cds;Parent=Msa0684550-mRNA-1
chr4_4 CDS 47927415 47927521 47927415 ID=Msa0684550-mRNA-1:cds;Parent=Msa0684550-mRNA-1
chr4_4 CDS 47927673 47927716 47927673 ID=Msa0684550-mRNA-1:cds;Parent=Msa0684550-mRNA-1
Gene Sequence

>Msa0684550

ATGGGTCGCCATTTCTGTTCTTTAAAGCAAAAACTAAGAAAAGGTTTATGGTCCCCTGAAAAAGATGAGAAGCTTTTCAATTACATAACGATGTTTGGTGTTGGATGTTGTTGTTCAGTTCCTAAACTAGCTGGGTTGCAAAGGTGTGGAAAGAGTTGTATATTAAGATGGATAAACTATTTGAGGCCTGATTTGAAGAGAGGAATGTTCTCAAAACAAGAGCGTGAATATATTGTTAATTATGGATTGTACATGTTGTATGCAGAAACATGTTATCCTCCTTTGGTACAATATGTAACTTACAACAGATTATGTCCCATGGGAACAATGGATTGTCCTTCTTATTATGTTCCGTCATTACCCTACATGTGTGCAGGCTTTGATCGTGACCCTTATCAGTTTCAATCTACACCTTTGATTCCCTTTGAGTTCTTCGGTGATGAAAATGGAAACGGGCGTTCTGTTATTAAGCGCTTGACACCTTCAAATACCGCAATCTTGTCTCCTATATACTATGTCATTTTTACAACACTTGCAATATTGGCCACTGTAATAATGTTCAAGGTACCGCCTACAAATGGCGGCTTGCCTTCTTGCAGATGGCCATTGTTTTGGCCTTGA
Protein sequence

>Msa0684550

MGRHFCSLKQKLRKGLWSPEKDEKLFNYITMFGVGCCCSVPKLAGLQRCGKSCILRWINYLRPDLKRGMFSKQEREYIVNYGLYMLYAETCYPPLVQYVTYNRLCPMGTMDCPSYYVPSLPYMCAGFDRDPYQFQSTPLIPFEFFGDENGNGRSVIKRLTPSNTAILSPIYYVIFTTLAILATVIMFKVPPTNGGLPSCRWPLFWP*