AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0684730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0684730 MtrunA17_Chr4g0032951 84.382 429 17 5 1 387 1 421 0.0 665
Msa0684730 MtrunA17_Chr2g0329041 47.836 439 128 13 1 383 1 394 4.31e-116 343
Msa0684730 MtrunA17_Chr1g0174271 46.835 237 87 6 181 382 127 359 1.34e-56 190
Msa0684730 MtrunA17_Chr3g0087771 35.238 420 171 14 15 386 21 387 3.37e-44 157
Msa0684730 MtrunA17_Chr7g0258181 76.923 78 18 0 306 383 228 305 7.99e-35 130
Msa0684730 MtrunA17_Chr8g0351881 36.694 248 93 9 181 385 154 380 2.51e-34 130
Msa0684730 MtrunA17_Chr4g0014771 76.316 76 16 1 307 382 106 179 4.48e-33 122
Msa0684730 MtrunA17_Chr1g0213791 80.882 68 13 0 315 382 259 326 2.66e-31 121
Msa0684730 MtrunA17_Chr3g0131771 61.290 62 24 0 321 382 147 208 3.54e-16 79.0
Msa0684730 MtrunA17_Chr4g0074161 56.061 66 28 1 320 385 205 269 8.29e-16 78.6
Msa0684730 MtrunA17_Chr1g0152131 55.385 65 29 0 321 385 260 324 2.22e-15 77.4
Msa0684730 MtrunA17_Chr8g0339091 48.315 89 39 1 304 385 267 355 6.34e-15 76.3
Msa0684730 MtrunA17_Chr3g0144641 58.065 62 26 0 321 382 191 252 8.05e-15 75.5
Msa0684730 MtrunA17_Chr7g0234761 58.065 62 26 0 321 382 317 378 9.45e-15 75.9
Msa0684730 MtrunA17_Chr8g0365941 58.065 62 26 0 321 382 305 366 1.11e-14 75.5
Msa0684730 MtrunA17_Chr1g0190731 46.429 84 34 2 302 385 184 256 2.30e-14 73.6
Msa0684730 MtrunA17_Chr8g0385911 56.452 62 27 0 321 382 145 206 3.15e-14 73.2
Msa0684730 MtrunA17_Chr5g0421111 53.846 65 30 0 321 385 365 429 3.80e-14 73.9
Msa0684730 MtrunA17_Chr4g0035101 56.452 62 27 0 321 382 143 204 3.90e-14 72.8
Msa0684730 MtrunA17_Chr8g0363921 52.308 65 31 0 321 385 151 215 9.95e-14 70.9
Msa0684730 MtrunA17_Chr5g0415291 50.769 65 32 0 321 385 112 176 3.26e-13 68.9
Msa0684730 MtrunA17_Chr6g0484271 48.387 62 32 0 321 382 155 216 1.23e-11 64.7
Msa0684730 MtrunA17_Chr3g0134741 51.562 64 30 1 320 383 228 290 2.89e-11 63.9
Msa0684730 MtrunA17_Chr1g0174161 43.077 65 37 0 321 385 160 224 3.42e-11 63.9
Msa0684730 MtrunA17_Chr1g0152651 50.000 66 32 1 320 385 273 337 3.81e-11 63.9
Msa0684730 MtrunA17_Chr7g0258161 44.615 65 36 0 321 385 173 237 4.45e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0684730 AT1G51140.1 39.659 411 175 17 1 383 1 366 2.74e-64 210
Msa0684730 AT2G42280.1 33.842 393 168 12 25 387 15 345 2.52e-46 162
Msa0684730 AT2G42280.3 43.038 237 85 5 177 383 125 341 1.27e-45 160
Msa0684730 AT1G35460.1 75.342 73 18 0 313 385 173 245 6.08e-34 127
Msa0684730 AT1G05805.1 72.727 77 20 1 307 382 268 344 8.29e-32 124
Msa0684730 AT4G09180.1 74.648 71 18 0 315 385 178 248 3.39e-30 117
Msa0684730 AT2G43140.1 76.471 68 16 0 315 382 128 195 2.51e-29 113
Msa0684730 AT2G43140.2 76.471 68 16 0 315 382 225 292 1.27e-28 114
Msa0684730 AT1G35460.2 82.979 47 8 0 313 359 173 219 3.60e-22 94.4
Msa0684730 AT2G42280.2 27.326 344 158 12 25 338 15 296 1.19e-16 80.1
Msa0684730 AT2G24260.2 57.576 66 27 1 320 385 34 98 1.92e-16 78.6
Msa0684730 AT2G24260.1 57.576 66 27 1 320 385 137 201 4.87e-16 79.0
Msa0684730 AT5G58010.1 54.545 66 29 1 320 385 98 162 7.85e-16 77.8
Msa0684730 AT4G34530.1 50.633 79 37 1 307 385 160 236 7.88e-16 78.2
Msa0684730 AT4G30980.1 56.061 66 28 1 320 385 129 193 9.69e-16 77.8
Msa0684730 AT5G50915.3 59.677 62 25 0 321 382 136 197 1.12e-15 77.0
Msa0684730 AT5G50915.4 59.677 62 25 0 321 382 136 197 1.12e-15 77.0
Msa0684730 AT5G50915.1 59.677 62 25 0 321 382 136 197 1.43e-15 77.0
Msa0684730 AT5G50915.2 59.677 62 25 0 321 382 136 197 1.43e-15 77.0
Msa0684730 AT4G30980.2 56.061 66 28 1 320 385 177 241 1.43e-15 77.8
Msa0684730 AT1G25330.1 52.308 65 31 0 321 385 104 168 2.00e-15 75.5
Msa0684730 AT1G68920.3 55.385 65 29 0 321 385 302 366 4.89e-15 77.0
Msa0684730 AT1G68920.1 55.385 65 29 0 321 385 303 367 5.23e-15 77.0
Msa0684730 AT1G68920.4 55.385 65 29 0 321 385 303 367 5.23e-15 77.0
Msa0684730 AT1G68920.2 55.385 65 29 0 321 385 303 367 5.23e-15 77.0
Msa0684730 AT1G26260.5 55.385 65 29 0 321 385 201 265 7.57e-15 75.9
Msa0684730 AT1G26260.4 55.385 65 29 0 321 385 223 287 1.00e-14 75.5
Msa0684730 AT1G26260.1 55.385 65 29 0 321 385 223 287 1.00e-14 75.5
Msa0684730 AT1G26260.6 55.385 65 29 0 321 385 223 287 1.00e-14 75.5
Msa0684730 AT1G26260.2 55.385 65 29 0 321 385 223 287 1.00e-14 75.5
Msa0684730 AT1G26260.3 55.385 65 29 0 321 385 172 236 1.05e-14 75.1
Msa0684730 AT3G07340.2 55.385 65 29 0 321 385 258 322 1.21e-14 75.5
Msa0684730 AT1G10120.2 55.385 65 29 0 321 385 206 270 1.24e-14 75.1
Msa0684730 AT1G10120.1 55.385 65 29 0 321 385 206 270 1.24e-14 75.1
Msa0684730 AT3G07340.1 55.385 65 29 0 321 385 258 322 1.39e-14 75.5
Msa0684730 AT1G73830.2 52.308 65 31 0 321 385 147 211 2.08e-14 73.2
Msa0684730 AT1G73830.1 52.308 65 31 0 321 385 147 211 2.26e-14 73.2
Msa0684730 AT1G18400.2 54.839 62 28 0 321 382 145 206 2.31e-14 72.8
Msa0684730 AT1G18400.1 54.839 62 28 0 321 382 145 206 3.25e-14 72.4
Msa0684730 AT5G48560.2 53.846 65 30 0 321 385 301 365 3.49e-14 74.3
Msa0684730 AT5G48560.1 53.846 65 30 0 321 385 301 365 3.65e-14 74.3
Msa0684730 AT3G23690.1 45.455 88 39 2 298 385 177 255 4.80e-14 73.2
Msa0684730 AT1G59640.1 52.308 65 31 0 321 385 136 200 2.17e-13 70.1
Msa0684730 AT1G59640.2 54.839 62 28 0 321 382 136 197 1.01e-12 68.9
Msa0684730 AT2G18300.2 49.231 65 33 0 321 385 185 249 1.03e-12 68.9
Msa0684730 AT2G18300.1 51.613 62 30 0 321 382 185 246 1.11e-12 68.9
Msa0684730 AT4G36540.1 51.613 62 30 0 321 382 141 202 1.48e-12 68.2
Msa0684730 AT4G36540.2 51.613 62 30 0 321 382 141 202 1.48e-12 68.2
Msa0684730 AT2G18300.3 51.613 62 30 0 321 382 185 246 1.54e-12 68.6
Msa0684730 AT2G42300.1 46.575 73 38 1 314 385 177 249 1.66e-12 68.2
Msa0684730 AT2G42300.4 46.575 73 38 1 314 385 177 249 2.11e-12 67.4
Msa0684730 AT3G57800.2 46.269 67 36 0 319 385 202 268 1.12e-11 66.2
Msa0684730 AT5G62610.2 50.000 62 31 0 321 382 153 214 1.65e-11 64.7
Msa0684730 AT5G62610.1 50.000 62 31 0 321 382 153 214 1.65e-11 64.7
Msa0684730 AT1G27740.1 47.222 72 37 1 316 387 162 232 2.19e-11 64.3

Find 92 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTAATAATTTGAGTAATTA+TGG 0.186951 4_4:+48306442 Msa0684730:CDS
TCACTCTGTTCACCCCTTAT+TGG 0.206448 4_4:+48305294 Msa0684730:five_prime_UTR
TGCCACGTTCCATTCATATT+TGG 0.254794 4_4:+48305201 Msa0684730:five_prime_UTR
CATCAACAACAAATGAATTC+AGG 0.258063 4_4:+48306055 Msa0684730:CDS
ACCCTTTCTGCAATGCTTCT+TGG 0.259998 4_4:-48308097 None:intergenic
CCCTTTCTGCAATGCTTCTT+GGG 0.277269 4_4:-48308096 None:intergenic
CTGTGGAGGTGCAGCCAATA+AGG 0.286657 4_4:-48305308 None:intergenic
TCAACTACTGAATCAGTTAT+AGG 0.313043 4_4:-48306280 None:intergenic
CGAGTTTCAGCAAAACCTTC+AGG 0.323395 4_4:-48307499 None:intergenic
CCTAACGGTGAGGCATAGTT+TGG 0.353263 4_4:-48307433 None:intergenic
CTTTCTGTTTCAGGACTTGA+AGG 0.354030 4_4:-48306160 None:intergenic
TTTGCTGCTATGAGAGGAAT+AGG 0.354357 4_4:+48307337 Msa0684730:CDS
TAATGATGTATGAATAATTA+TGG 0.357532 4_4:-48308879 None:intergenic
TATGAGAGGAATAGGAACTA+TGG 0.359228 4_4:+48307345 Msa0684730:CDS
GGTGGTAGTGGTGGTGGTGG+TGG 0.363507 4_4:+48306220 Msa0684730:CDS
GGATTTAAACCTGGAGGAAA+TGG 0.364210 4_4:-48307634 None:intergenic
TCAAACATTAACATTGATAC+TGG 0.367647 4_4:+48306583 Msa0684730:CDS
ATGATATCTGACAATATTAC+TGG 0.368731 4_4:+48307577 Msa0684730:CDS
ATGTTTACCTTATCCATGTT+TGG 0.374666 4_4:-48308637 None:intergenic
GGAAGGTTCAAGAGAGAAAA+GGG 0.379526 4_4:-48305361 None:intergenic
CCCAAGAAGCATTGCAGAAA+GGG 0.381192 4_4:+48308096 Msa0684730:CDS
TCAACCTCTTCCTTAACTAT+AGG 0.381573 4_4:-48306346 None:intergenic
TTTATCCCGGGTTTCCCCTT+AGG 0.384096 4_4:+48307532 Msa0684730:CDS
TCTCTTGAACCTTCCTATAG+AGG 0.385056 4_4:+48305369 Msa0684730:five_prime_UTR
GGAAGTGGTGGTAGTGGTGG+TGG 0.399180 4_4:+48306214 Msa0684730:CDS
TCACCGTTAGGAGCTGAAAT+CGG 0.415027 4_4:+48307445 Msa0684730:CDS
AGGAAGGTTCAAGAGAGAAA+AGG 0.420279 4_4:-48305362 None:intergenic
TGTGGAGGTGCAGCCAATAA+GGG 0.436386 4_4:-48305307 None:intergenic
GAAAGTGAAGAAACCTCTAT+AGG 0.438178 4_4:-48305382 None:intergenic
AAGGTGGTCTTCCTGAATTA+TGG 0.439700 4_4:-48306492 None:intergenic
CGACCGGTCTTCATTTGATT+CGG 0.440686 4_4:-48306517 None:intergenic
GCAACAGCTTCCTATAGTTA+AGG 0.446191 4_4:+48306336 Msa0684730:CDS
AGTGGTGGTAGTGGTGGTGG+TGG 0.447971 4_4:+48306217 Msa0684730:CDS
TGATGATCTAGAAACATTGT+TGG 0.448634 4_4:-48306025 None:intergenic
CACCGTTAGGAGCTGAAATC+GGG 0.453811 4_4:+48307446 Msa0684730:CDS
ATCCTCCCATGTGGTACCTA+AGG 0.463348 4_4:-48307548 None:intergenic
CCAAACTATGCCTCACCGTT+AGG 0.468050 4_4:+48307433 Msa0684730:CDS
CGGAGGAAGTAATTATAGAA+AGG 0.471639 4_4:-48308927 None:intergenic
ATGAATAGTCTTAGTGGAAG+TGG 0.476450 4_4:+48306199 Msa0684730:CDS
ATCAACAACAAATGAATTCA+GGG 0.477414 4_4:+48306056 Msa0684730:CDS
GTCTTCATTTGATTCGGTAA+AGG 0.477771 4_4:-48306511 None:intergenic
TGCAATGCTTCTTGGGTGAG+TGG 0.478659 4_4:-48308089 None:intergenic
TAGAGAAGTGAGAATGAGAT+TGG 0.487406 4_4:-48308836 None:intergenic
TTGAGAAAACCAAATATGAA+TGG 0.501615 4_4:-48305210 None:intergenic
CACACAACAAATCTGAAAGC+TGG 0.505837 4_4:+48305266 Msa0684730:five_prime_UTR
CTAAAATTAGCGAGCGAATG+AGG 0.505851 4_4:+48308596 Msa0684730:CDS
AGTGGAAGTGGTGGTAGTGG+TGG 0.511352 4_4:+48306211 Msa0684730:CDS
CTTAGTGGAAGTGGTGGTAG+TGG 0.518560 4_4:+48306208 Msa0684730:CDS
GGTTGAATATAAAATAGCAT+TGG 0.523804 4_4:-48305340 None:intergenic
AGGTTTATGAATAGTCTTAG+TGG 0.525192 4_4:+48306193 Msa0684730:CDS
TCTCGTGCCAAACATGGATA+AGG 0.525796 4_4:+48308630 Msa0684730:CDS
CACATCAGACATGTTGGACT+TGG 0.527533 4_4:+48308757 Msa0684730:CDS
GATGTAAAACCATTTCCTCC+AGG 0.529045 4_4:+48307625 Msa0684730:CDS
ACCCAAGAAGCATTGCAGAA+AGG 0.537449 4_4:+48308095 Msa0684730:CDS
TGCAAAATTCGTGCTAAACG+TGG 0.539427 4_4:+48308061 Msa0684730:CDS
TCCTCCCATGTGGTACCTAA+GGG 0.540312 4_4:-48307547 None:intergenic
TTCATTTGATTCGGTAAAGG+TGG 0.540846 4_4:-48306508 None:intergenic
GCTTCCTATAGTTAAGGAAG+AGG 0.542479 4_4:+48306342 Msa0684730:CDS
CGAGCGAATGAGGAAACTAC+AGG 0.543755 4_4:+48308606 Msa0684730:CDS
TCAGGTTCAAGATTGTTTCG+TGG 0.547445 4_4:-48307481 None:intergenic
AACAAACACATCAGACATGT+TGG 0.549768 4_4:+48308751 Msa0684730:CDS
ATGAGAGGAATAGGAACTAT+GGG 0.549779 4_4:+48307346 Msa0684730:CDS
TGTTTGTACATACCTCAACT+TGG 0.553379 4_4:-48308808 None:intergenic
ATGTTTGAAAACAATCCAGC+AGG 0.553542 4_4:-48306568 None:intergenic
CTCCCGATTTCAGCTCCTAA+CGG 0.555564 4_4:-48307448 None:intergenic
GTGGTACCTAAGGGGAAACC+CGG 0.567524 4_4:-48307538 None:intergenic
CGGTCTAGTCTTATTAGACA+TGG 0.567978 4_4:+48306538 Msa0684730:CDS
AGACATGGTAGTTCACCTGC+TGG 0.569719 4_4:+48306553 Msa0684730:CDS
ACAGGATCTCGTGCCAAACA+TGG 0.576148 4_4:+48308624 Msa0684730:CDS
CGAAACAATCTTGAACCTGA+AGG 0.583064 4_4:+48307484 Msa0684730:CDS
GTTTCCCCTTAGGTACCACA+TGG 0.584871 4_4:+48307542 Msa0684730:CDS
AAGTTGTTTATAAGTATGAT+CGG 0.586683 4_4:-48308947 None:intergenic
GTGAAGAAACCTCTATAGGA+AGG 0.588934 4_4:-48305378 None:intergenic
AAATGAATTCAGGGTTAACA+CGG 0.591208 4_4:+48306065 Msa0684730:CDS
AAGAGAGAAAGAAAGAACAA+AGG 0.593891 4_4:-48305163 None:intergenic
AATGAATAACAATGAATCTG+TGG 0.596436 4_4:+48306393 Msa0684730:CDS
CCCCTTAGGTACCACATGGG+AGG 0.612122 4_4:+48307546 Msa0684730:CDS
TCTAATAAGACTAGACCGAC+CGG 0.616887 4_4:-48306533 None:intergenic
AATAGTCTTAGTGGAAGTGG+TGG 0.627049 4_4:+48306202 Msa0684730:CDS
TTACCGAATCAAATGAAGAC+CGG 0.652711 4_4:+48306514 Msa0684730:CDS
CCTCCCATGTGGTACCTAAG+GGG 0.663126 4_4:-48307546 None:intergenic
CGAATCAAATGAAGACCGGT+CGG 0.664050 4_4:+48306518 Msa0684730:CDS
GTGGAGGTGCAGCCAATAAG+GGG 0.668003 4_4:-48305306 None:intergenic
TGGTACCTAAGGGGAAACCC+GGG 0.679069 4_4:-48307537 None:intergenic
GCGTGTAGTGAAGAGAGTGG+TGG 0.682382 4_4:-48305414 None:intergenic
AGACCTACAAAACCAAGTTG+AGG 0.687966 4_4:+48308796 Msa0684730:CDS
TTGTTTATAAGTATGATCGG+AGG 0.700713 4_4:-48308944 None:intergenic
TTTCCCCTTAGGTACCACAT+GGG 0.701805 4_4:+48307543 Msa0684730:CDS
GTAGCGTGTAGTGAAGAGAG+TGG 0.703050 4_4:-48305417 None:intergenic
GATTTCAGCTCCTAACGGTG+AGG 0.706801 4_4:-48307443 None:intergenic
CATCGCAGTATCCTCCCATG+TGG 0.735897 4_4:-48307557 None:intergenic
AACCAAATATGAATGGAACG+TGG 0.761445 4_4:-48305203 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTGAAAAATATGAACT+TGG - chr4_4:48306103-48306122 None:intergenic 15.0%
!! AGTAATAATTTGAGTAATTA+TGG + chr4_4:48306442-48306461 Msa0684730:CDS 15.0%
!!! ATTTATATTTTGTGCATATT+TGG - chr4_4:48306916-48306935 None:intergenic 15.0%
!! TAATGATGTATGAATAATTA+TGG - chr4_4:48308882-48308901 None:intergenic 15.0%
!! ATAGTTCATATCTTTGTATA+TGG + chr4_4:48305540-48305559 Msa0684730:intron 20.0%
!! AAAAACTGAAAAAGATGAAA+GGG - chr4_4:48305809-48305828 None:intergenic 20.0%
!!! GATCGAATTTTTATTTTTAC+AGG + chr4_4:48305928-48305947 Msa0684730:intron 20.0%
!!! TGTAGTTTTTATCAAAATCA+CGG + chr4_4:48306855-48306874 Msa0684730:intron 20.0%
!! AAGTTAATTAGAAATCCAAT+AGG + chr4_4:48307235-48307254 Msa0684730:intron 20.0%
!!! TCATTTTCTTGATCATAAAT+AGG + chr4_4:48307278-48307297 Msa0684730:intron 20.0%
!! GTACAAGTGAAAAATAAAAT+GGG - chr4_4:48308150-48308169 None:intergenic 20.0%
!! TGTACAAGTGAAAAATAAAA+TGG - chr4_4:48308151-48308170 None:intergenic 20.0%
!! TTTACTAGTTGACAAATAAT+TGG + chr4_4:48308329-48308348 Msa0684730:intron 20.0%
!!! TTATTCAATGGTTACTTTAT+CGG + chr4_4:48308384-48308403 Msa0684730:intron 20.0%
!! TAATTGTTGAAACTGTTTAA+AGG - chr4_4:48308476-48308495 None:intergenic 20.0%
!! ATAATTCAAAGTAGTTATGT+AGG - chr4_4:48308687-48308706 None:intergenic 20.0%
!! TACATAACTACTTTGAATTA+TGG + chr4_4:48308686-48308705 Msa0684730:intron 20.0%
! TTGAGAAAACCAAATATGAA+TGG - chr4_4:48305213-48305232 None:intergenic 25.0%
!!! ATTCATATTTGGTTTTCTCA+AGG + chr4_4:48305212-48305231 Msa0684730:five_prime_UTR 25.0%
!!! TTCATATTTGGTTTTCTCAA+GGG + chr4_4:48305213-48305232 Msa0684730:five_prime_UTR 25.0%
! GGTTGAATATAAAATAGCAT+TGG - chr4_4:48305343-48305362 None:intergenic 25.0%
! AAACAACAAAGACAATAGTT+TGG - chr4_4:48305652-48305671 None:intergenic 25.0%
!!! ACTATTGTCTTTGTTGTTTT+TGG + chr4_4:48305653-48305672 Msa0684730:intron 25.0%
! AAAACTGAAAAAGATGAAAG+GGG - chr4_4:48305808-48305827 None:intergenic 25.0%
! CAAAAACTGAAAAAGATGAA+AGG - chr4_4:48305810-48305829 None:intergenic 25.0%
!! GTGAAATAAATTGATTTCCT+TGG + chr4_4:48305840-48305859 Msa0684730:intron 25.0%
!! AAATAAATTGATTTCCTTGG+TGG + chr4_4:48305843-48305862 Msa0684730:intron 25.0%
!! AATAAATTGATTTCCTTGGT+GGG + chr4_4:48305844-48305863 Msa0684730:intron 25.0%
! ATCAACAACAAATGAATTCA+GGG + chr4_4:48306056-48306075 Msa0684730:CDS 25.0%
! AATGAATAACAATGAATCTG+TGG + chr4_4:48306393-48306412 Msa0684730:CDS 25.0%
! TCAAACATTAACATTGATAC+TGG + chr4_4:48306583-48306602 Msa0684730:CDS 25.0%
! TCATGATAAGAAAAAGAGTA+TGG - chr4_4:48306616-48306635 None:intergenic 25.0%
!!! ATGGAAATAGGTATTGAAAA+GGG - chr4_4:48306679-48306698 None:intergenic 25.0%
!!! AATGGAAATAGGTATTGAAA+AGG - chr4_4:48306680-48306699 None:intergenic 25.0%
! CCATGTAAAACAAAGAAAAA+GGG - chr4_4:48306721-48306740 None:intergenic 25.0%
! ACCATGTAAAACAAAGAAAA+AGG - chr4_4:48306722-48306741 None:intergenic 25.0%
! ATAACAAAGTAAAGCTACTT+AGG - chr4_4:48306747-48306766 None:intergenic 25.0%
!!! GTGACTTTTTTAAATAACTC+CGG + chr4_4:48306788-48306807 Msa0684730:intron 25.0%
! TTCCTTACTAAAACTATGAT+GGG - chr4_4:48306961-48306980 None:intergenic 25.0%
! GCAATAAATAGTAAACCTAT+TGG - chr4_4:48307253-48307272 None:intergenic 25.0%
! ATGATATCTGACAATATTAC+TGG + chr4_4:48307577-48307596 Msa0684730:CDS 25.0%
! TTGTTAAATAGAAGCTATAG+CGG + chr4_4:48307793-48307812 Msa0684730:intron 25.0%
!! ATAGACAATCTGATTTTTCT+CGG + chr4_4:48308189-48308208 Msa0684730:intron 25.0%
!! TGCATAACAAAATGAGTTTT+TGG - chr4_4:48308240-48308259 None:intergenic 25.0%
! AATAATTGGCATCCAATAAT+TGG + chr4_4:48308343-48308362 Msa0684730:intron 25.0%
! TTGAATAAAAATCTCTGTTG+TGG - chr4_4:48308372-48308391 None:intergenic 25.0%
!! CAACAGAGATTTTTATTCAA+TGG + chr4_4:48308372-48308391 Msa0684730:intron 25.0%
!!! AAACAATGTTTGGTTTGTTA+AGG - chr4_4:48308715-48308734 None:intergenic 25.0%
AAGAGAGAAAGAAAGAACAA+AGG - chr4_4:48305166-48305185 None:intergenic 30.0%
!!! ACTTTTTTGTTGTTGTGTTG+GGG - chr4_4:48305456-48305475 None:intergenic 30.0%
!!! CACTTTTTTGTTGTTGTGTT+GGG - chr4_4:48305457-48305476 None:intergenic 30.0%
!!! ACACTTTTTTGTTGTTGTGT+TGG - chr4_4:48305458-48305477 None:intergenic 30.0%
!!! TGCACTAGAGGTATTTTTTT+TGG + chr4_4:48305478-48305497 Msa0684730:five_prime_UTR 30.0%
TGTTTAACTATAAGAGACAC+TGG + chr4_4:48305567-48305586 Msa0684730:intron 30.0%
AAGAAACCAAATTCGATTTC+TGG - chr4_4:48305629-48305648 None:intergenic 30.0%
AAACTGAAAAAGATGAAAGG+GGG - chr4_4:48305807-48305826 None:intergenic 30.0%
GAAGAAGAAGAAGAAAAGAA+TGG + chr4_4:48305982-48306001 Msa0684730:exon 30.0%
TGATGATCTAGAAACATTGT+TGG - chr4_4:48306028-48306047 None:intergenic 30.0%
CATCAACAACAAATGAATTC+AGG + chr4_4:48306055-48306074 Msa0684730:CDS 30.0%
AAATGAATTCAGGGTTAACA+CGG + chr4_4:48306065-48306084 Msa0684730:CDS 30.0%
! AAACAGAAAGAGTTTTTGCA+AGG + chr4_4:48306173-48306192 Msa0684730:CDS 30.0%
! AGGTTTATGAATAGTCTTAG+TGG + chr4_4:48306193-48306212 Msa0684730:CDS 30.0%
TCAACTACTGAATCAGTTAT+AGG - chr4_4:48306283-48306302 None:intergenic 30.0%
GAATTATGGTAAAAACTCTG+AGG - chr4_4:48306481-48306500 None:intergenic 30.0%
! CAGAGTTTTTACCATAATTC+AGG + chr4_4:48306481-48306500 Msa0684730:CDS 30.0%
AAAAAAGAGGCAATGGAAAT+AGG - chr4_4:48306691-48306710 None:intergenic 30.0%
!!! CCCTTTTTCTTTGTTTTACA+TGG + chr4_4:48306718-48306737 Msa0684730:intron 30.0%
! TTTTAAATAACTCCGGAATC+CGG + chr4_4:48306795-48306814 Msa0684730:intron 30.0%
! AGTTTTTATCAAAATCACGG+TGG + chr4_4:48306858-48306877 Msa0684730:intron 30.0%
GTTCCTTACTAAAACTATGA+TGG - chr4_4:48306962-48306981 None:intergenic 30.0%
AGAGGTCTTGATTTAAATCT+AGG + chr4_4:48307136-48307155 Msa0684730:intron 30.0%
! AGCAAATTTTTCTTCTTCTG+CGG + chr4_4:48307393-48307412 Msa0684730:CDS 30.0%
! CATCATCTCTGTATCTTTTT+AGG - chr4_4:48307603-48307622 None:intergenic 30.0%
TTTAAATCCAGCTGAAACTA+AGG + chr4_4:48307648-48307667 Msa0684730:intron 30.0%
TGAATTGTACGATTGGAATT+TGG + chr4_4:48307675-48307694 Msa0684730:intron 30.0%
TATTATCGAGTTCTACAACA+AGG - chr4_4:48308419-48308438 None:intergenic 30.0%
CTGAAAATCAATTCACATGA+TGG - chr4_4:48308566-48308585 None:intergenic 30.0%
!! CATCATGTGAATTGATTTTC+AGG + chr4_4:48308564-48308583 Msa0684730:intron 30.0%
ATGTTTACCTTATCCATGTT+TGG - chr4_4:48308640-48308659 None:intergenic 30.0%
!!! AAGGTAAACATTTTGACTTG+TGG + chr4_4:48308649-48308668 Msa0684730:intron 30.0%
TTCAAAGTAGTTATGTAGGT+TGG - chr4_4:48308683-48308702 None:intergenic 30.0%
GAAAAGTGAGAAACAATGTT+TGG - chr4_4:48308725-48308744 None:intergenic 30.0%
AACCAAATATGAATGGAACG+TGG - chr4_4:48305206-48305225 None:intergenic 35.0%
GAAAGTGAAGAAACCTCTAT+AGG - chr4_4:48305385-48305404 None:intergenic 35.0%
!!! CTTTTTTGTTGTTGTGTTGG+GGG - chr4_4:48305455-48305474 None:intergenic 35.0%
!! ACAAAAAAGTGTTGCACTAG+AGG + chr4_4:48305466-48305485 Msa0684730:five_prime_UTR 35.0%
GTTACACCAGAAATCGAATT+TGG + chr4_4:48305620-48305639 Msa0684730:intron 35.0%
TCACTCAGCATCAAAACAAA+CGG - chr4_4:48305707-48305726 None:intergenic 35.0%
!!! TTTGTTTTGATGCTGAGTGA+TGG + chr4_4:48305707-48305726 Msa0684730:intron 35.0%
!! ACATGAGCTGTTTTGTGTTA+TGG - chr4_4:48305745-48305764 None:intergenic 35.0%
ATAACAAAGAAAACCCACCA+AGG - chr4_4:48305860-48305879 None:intergenic 35.0%
GCAAAAACTCTTTCTGTTTC+AGG - chr4_4:48306172-48306191 None:intergenic 35.0%
! ATGAATAGTCTTAGTGGAAG+TGG + chr4_4:48306199-48306218 Msa0684730:CDS 35.0%
TCAACCTCTTCCTTAACTAT+AGG - chr4_4:48306349-48306368 None:intergenic 35.0%
!! TTCATTTGATTCGGTAAAGG+TGG - chr4_4:48306511-48306530 None:intergenic 35.0%
!! GTCTTCATTTGATTCGGTAA+AGG - chr4_4:48306514-48306533 None:intergenic 35.0%
TTACCGAATCAAATGAAGAC+CGG + chr4_4:48306514-48306533 Msa0684730:CDS 35.0%
ATGTTTGAAAACAATCCAGC+AGG - chr4_4:48306571-48306590 None:intergenic 35.0%
AATCACGAAAAAAGAGGCAA+TGG - chr4_4:48306698-48306717 None:intergenic 35.0%
AAAGGGAATCACGAAAAAAG+AGG - chr4_4:48306704-48306723 None:intergenic 35.0%
ATCATCGTGTCAATCTAATC+CGG - chr4_4:48306817-48306836 None:intergenic 35.0%
! TGATTTTGCTGAATTCGTTG+TGG + chr4_4:48306888-48306907 Msa0684730:intron 35.0%
! CTTACTAAAACTATGATGGG+TGG - chr4_4:48306958-48306977 None:intergenic 35.0%
!!! CACCCATCATAGTTTTAGTA+AGG + chr4_4:48306956-48306975 Msa0684730:intron 35.0%
! CATTTTCCAGCTAATTGGAT+CGG - chr4_4:48307042-48307061 None:intergenic 35.0%
! GTTCTCATTTTCCAGCTAAT+TGG - chr4_4:48307047-48307066 None:intergenic 35.0%
GCTGGAAAATGAGAACATAA+TGG + chr4_4:48307051-48307070 Msa0684730:intron 35.0%
! TCATGAAAGTACAACTCAGT+TGG + chr4_4:48307090-48307109 Msa0684730:intron 35.0%
GGCTACTTGACCTAAAAAAA+CGG + chr4_4:48307187-48307206 Msa0684730:intron 35.0%
GCTACTTGACCTAAAAAAAC+GGG + chr4_4:48307188-48307207 Msa0684730:intron 35.0%
!!! TCACGAAATCCCGTTTTTTT+AGG - chr4_4:48307200-48307219 None:intergenic 35.0%
TATAATGATGCTAGCTACCT+TGG + chr4_4:48307305-48307324 Msa0684730:intron 35.0%
TATGAGAGGAATAGGAACTA+TGG + chr4_4:48307345-48307364 Msa0684730:CDS 35.0%
ATGAGAGGAATAGGAACTAT+GGG + chr4_4:48307346-48307365 Msa0684730:CDS 35.0%
! ATTTTTCTTCTTCTGCGGTA+CGG + chr4_4:48307398-48307417 Msa0684730:CDS 35.0%
AGGTAGTTGAATTGTACGAT+TGG + chr4_4:48307668-48307687 Msa0684730:intron 35.0%
ATAGCTATTGTTCTGCAATG+TGG + chr4_4:48307754-48307773 Msa0684730:intron 35.0%
GATGAGTATGCCAAATACTA+CGG + chr4_4:48307988-48308007 Msa0684730:intron 35.0%
GAACTGCAAAAACTTCTCAA+TGG - chr4_4:48308026-48308045 None:intergenic 35.0%
TGTGCAAGATTGTAAAGATG+TGG - chr4_4:48308304-48308323 None:intergenic 35.0%
! AATCAATTCACATGATGGTG+AGG - chr4_4:48308561-48308580 None:intergenic 35.0%
AACAAACACATCAGACATGT+TGG + chr4_4:48308751-48308770 Msa0684730:CDS 35.0%
!!! ATACCTCAACTTGGTTTTGT+AGG - chr4_4:48308802-48308821 None:intergenic 35.0%
TGTTTGTACATACCTCAACT+TGG - chr4_4:48308811-48308830 None:intergenic 35.0%
TAGAGAAGTGAGAATGAGAT+TGG - chr4_4:48308839-48308858 None:intergenic 35.0%
CGGAGGAAGTAATTATAGAA+AGG - chr4_4:48308930-48308949 None:intergenic 35.0%
TGCCACGTTCCATTCATATT+TGG + chr4_4:48305201-48305220 Msa0684730:five_prime_UTR 40.0%
CACACAACAAATCTGAAAGC+TGG + chr4_4:48305266-48305285 Msa0684730:five_prime_UTR 40.0%
! ATTGGATTTTGTTGCTGTGG+AGG - chr4_4:48305325-48305344 None:intergenic 40.0%
!! AGCATTGGATTTTGTTGCTG+TGG - chr4_4:48305328-48305347 None:intergenic 40.0%
GGAAGGTTCAAGAGAGAAAA+GGG - chr4_4:48305364-48305383 None:intergenic 40.0%
AGGAAGGTTCAAGAGAGAAA+AGG - chr4_4:48305365-48305384 None:intergenic 40.0%
TCTCTTGAACCTTCCTATAG+AGG + chr4_4:48305369-48305388 Msa0684730:five_prime_UTR 40.0%
GTGAAGAAACCTCTATAGGA+AGG - chr4_4:48305381-48305400 None:intergenic 40.0%
CTATAAGAGACACTGGTAAC+AGG + chr4_4:48305574-48305593 Msa0684730:intron 40.0%
CTTTCTGTTTCAGGACTTGA+AGG - chr4_4:48306163-48306182 None:intergenic 40.0%
! AATAGTCTTAGTGGAAGTGG+TGG + chr4_4:48306202-48306221 Msa0684730:CDS 40.0%
GCAACAGCTTCCTATAGTTA+AGG + chr4_4:48306336-48306355 Msa0684730:CDS 40.0%
GCTTCCTATAGTTAAGGAAG+AGG + chr4_4:48306342-48306361 Msa0684730:CDS 40.0%
AAGGTGGTCTTCCTGAATTA+TGG - chr4_4:48306495-48306514 None:intergenic 40.0%
TCTAATAAGACTAGACCGAC+CGG - chr4_4:48306536-48306555 None:intergenic 40.0%
!! CGGTCTAGTCTTATTAGACA+TGG + chr4_4:48306538-48306557 Msa0684730:CDS 40.0%
TGTCAATCTAATCCGGATTC+CGG - chr4_4:48306810-48306829 None:intergenic 40.0%
! GAAAGTACAACTCAGTTGGT+AGG + chr4_4:48307094-48307113 Msa0684730:intron 40.0%
!! TTTTAGGTCAAGTAGCCTAG+TGG - chr4_4:48307184-48307203 None:intergenic 40.0%
TTTGCTGCTATGAGAGGAAT+AGG + chr4_4:48307337-48307356 Msa0684730:CDS 40.0%
TCAGGTTCAAGATTGTTTCG+TGG - chr4_4:48307484-48307503 None:intergenic 40.0%
CGAAACAATCTTGAACCTGA+AGG + chr4_4:48307484-48307503 Msa0684730:CDS 40.0%
! CTGAAGGTTTTGCTGAAACT+CGG + chr4_4:48307500-48307519 Msa0684730:CDS 40.0%
! TGAAGGTTTTGCTGAAACTC+GGG + chr4_4:48307501-48307520 Msa0684730:CDS 40.0%
GATGTAAAACCATTTCCTCC+AGG + chr4_4:48307625-48307644 Msa0684730:CDS 40.0%
GGATTTAAACCTGGAGGAAA+TGG - chr4_4:48307637-48307656 None:intergenic 40.0%
GTTTCAGCTGGATTTAAACC+TGG - chr4_4:48307646-48307665 None:intergenic 40.0%
TCAACTACCTTAGTTTCAGC+TGG - chr4_4:48307658-48307677 None:intergenic 40.0%
! TTGCCAACACTGATTACATC+TGG + chr4_4:48307877-48307896 Msa0684730:intron 40.0%
ACACCAGATGTAATCAGTGT+TGG - chr4_4:48307883-48307902 None:intergenic 40.0%
! TGCATCGATCAGAATGAAAC+AGG + chr4_4:48307932-48307951 Msa0684730:intron 40.0%
ATCGATCAGAATGAAACAGG+AGG + chr4_4:48307935-48307954 Msa0684730:intron 40.0%
ATACTCATCTGATGAGCCAA+AGG - chr4_4:48307977-48307996 None:intergenic 40.0%
! CGTTTAGCACGAATTTTGCA+CGG - chr4_4:48308061-48308080 None:intergenic 40.0%
TGCAAAATTCGTGCTAAACG+TGG + chr4_4:48308061-48308080 Msa0684730:CDS 40.0%
! CTCGGTCACTTATTCAAGTT+TGG + chr4_4:48308207-48308226 Msa0684730:intron 40.0%
CTGTTGTGGATGCCAATTAT+TGG - chr4_4:48308358-48308377 None:intergenic 40.0%
GAGTTCTACAACAAGGAATC+TGG - chr4_4:48308412-48308431 None:intergenic 40.0%
! TGATGGTGAGGAAACATATG+TGG - chr4_4:48308549-48308568 None:intergenic 40.0%
CTAAAATTAGCGAGCGAATG+AGG + chr4_4:48308596-48308615 Msa0684730:CDS 40.0%
AGACCTACAAAACCAAGTTG+AGG + chr4_4:48308796-48308815 Msa0684730:CDS 40.0%
TCACTCTGTTCACCCCTTAT+TGG + chr4_4:48305294-48305313 Msa0684730:five_prime_UTR 45.0%
! GATGCTGAGTGATGGAAACT+TGG + chr4_4:48305715-48305734 Msa0684730:intron 45.0%
CGACCGGTCTTCATTTGATT+CGG - chr4_4:48306520-48306539 None:intergenic 45.0%
CGAATCAAATGAAGACCGGT+CGG + chr4_4:48306518-48306537 Msa0684730:CDS 45.0%
AATTGGATCGGCAGTCAGTT+TGG - chr4_4:48307030-48307049 None:intergenic 45.0%
GCAGGGACATTGATATACAG+AGG + chr4_4:48307118-48307137 Msa0684730:intron 45.0%
ATGATGCTAGCTACCTTGGT+CGG + chr4_4:48307309-48307328 Msa0684730:intron 45.0%
TCACCGTTAGGAGCTGAAAT+CGG + chr4_4:48307445-48307464 Msa0684730:CDS 45.0%
CGAGTTTCAGCAAAACCTTC+AGG - chr4_4:48307502-48307521 None:intergenic 45.0%
! GAAGGTTTTGCTGAAACTCG+GGG + chr4_4:48307502-48307521 Msa0684730:CDS 45.0%
! TCGGGGTAACGATTTTATCC+CGG + chr4_4:48307519-48307538 Msa0684730:CDS 45.0%
TTTCCCCTTAGGTACCACAT+GGG + chr4_4:48307543-48307562 Msa0684730:CDS 45.0%
TCAGCTGGATTTAAACCTGG+AGG - chr4_4:48307643-48307662 None:intergenic 45.0%
CTTCTCAATGGCTGCCAATT+CGG - chr4_4:48308014-48308033 None:intergenic 45.0%
!! ACCCAAGAAGCATTGCAGAA+AGG + chr4_4:48308095-48308114 Msa0684730:CDS 45.0%
CCCTTTCTGCAATGCTTCTT+GGG - chr4_4:48308099-48308118 None:intergenic 45.0%
!! CCCAAGAAGCATTGCAGAAA+GGG + chr4_4:48308096-48308115 Msa0684730:CDS 45.0%
ACCCTTTCTGCAATGCTTCT+TGG - chr4_4:48308100-48308119 None:intergenic 45.0%
TCTCGTGCCAAACATGGATA+AGG + chr4_4:48308630-48308649 Msa0684730:CDS 45.0%
CACATCAGACATGTTGGACT+TGG + chr4_4:48308757-48308776 Msa0684730:CDS 45.0%
! TGTGGAGGTGCAGCCAATAA+GGG - chr4_4:48305310-48305329 None:intergenic 50.0%
GTAGCGTGTAGTGAAGAGAG+TGG - chr4_4:48305420-48305439 None:intergenic 50.0%
! TTGTTGTTGTGTTGGGGGTG+TGG - chr4_4:48305450-48305469 None:intergenic 50.0%
CTTAGTGGAAGTGGTGGTAG+TGG + chr4_4:48306208-48306227 Msa0684730:CDS 50.0%
AGACATGGTAGTTCACCTGC+TGG + chr4_4:48306553-48306572 Msa0684730:CDS 50.0%
TGACTGCCGATCCAATTAGC+TGG + chr4_4:48307033-48307052 Msa0684730:intron 50.0%
!! ACAACTCAGTTGGTAGGTGC+AGG + chr4_4:48307100-48307119 Msa0684730:intron 50.0%
!! CAACTCAGTTGGTAGGTGCA+GGG + chr4_4:48307101-48307120 Msa0684730:intron 50.0%
! GCAGGTTTTGCTGCTATGAG+AGG + chr4_4:48307331-48307350 Msa0684730:intron 50.0%
CCTAACGGTGAGGCATAGTT+TGG - chr4_4:48307436-48307455 None:intergenic 50.0%
CCAAACTATGCCTCACCGTT+AGG + chr4_4:48307433-48307452 Msa0684730:CDS 50.0%
GATTTCAGCTCCTAACGGTG+AGG - chr4_4:48307446-48307465 None:intergenic 50.0%
CACCGTTAGGAGCTGAAATC+GGG + chr4_4:48307446-48307465 Msa0684730:CDS 50.0%
CTCCCGATTTCAGCTCCTAA+CGG - chr4_4:48307451-48307470 None:intergenic 50.0%
! CGGGGTAACGATTTTATCCC+GGG + chr4_4:48307520-48307539 Msa0684730:CDS 50.0%
TTTATCCCGGGTTTCCCCTT+AGG + chr4_4:48307532-48307551 Msa0684730:CDS 50.0%
GTTTCCCCTTAGGTACCACA+TGG + chr4_4:48307542-48307561 Msa0684730:CDS 50.0%
TCCTCCCATGTGGTACCTAA+GGG - chr4_4:48307550-48307569 None:intergenic 50.0%
ATCCTCCCATGTGGTACCTA+AGG - chr4_4:48307551-48307570 None:intergenic 50.0%
CCAAAGGAGCAGAAGTAGTC+TGG - chr4_4:48307961-48307980 None:intergenic 50.0%
CCAGACTACTTCTGCTCCTT+TGG + chr4_4:48307958-48307977 Msa0684730:intron 50.0%
GCCAAATACTACGGCCGAAT+TGG + chr4_4:48307997-48308016 Msa0684730:intron 50.0%
GCCAATTCGGCCGTAGTATT+TGG - chr4_4:48308001-48308020 None:intergenic 50.0%
TGCAATGCTTCTTGGGTGAG+TGG - chr4_4:48308092-48308111 None:intergenic 50.0%
CGAGCGAATGAGGAAACTAC+AGG + chr4_4:48308606-48308625 Msa0684730:CDS 50.0%
ACAGGATCTCGTGCCAAACA+TGG + chr4_4:48308624-48308643 Msa0684730:CDS 50.0%
! GTGGAGGTGCAGCCAATAAG+GGG - chr4_4:48305309-48305328 None:intergenic 55.0%
! CTGTGGAGGTGCAGCCAATA+AGG - chr4_4:48305311-48305330 None:intergenic 55.0%
GCGTGTAGTGAAGAGAGTGG+TGG - chr4_4:48305417-48305436 None:intergenic 55.0%
!! AGTGGAAGTGGTGGTAGTGG+TGG + chr4_4:48306211-48306230 Msa0684730:CDS 55.0%
AGGTCAAGTAGCCTAGTGGC+AGG - chr4_4:48307180-48307199 None:intergenic 55.0%
TGGTACCTAAGGGGAAACCC+GGG - chr4_4:48307540-48307559 None:intergenic 55.0%
GTGGTACCTAAGGGGAAACC+CGG - chr4_4:48307541-48307560 None:intergenic 55.0%
CCTCCCATGTGGTACCTAAG+GGG - chr4_4:48307549-48307568 None:intergenic 55.0%
CATCGCAGTATCCTCCCATG+TGG - chr4_4:48307560-48307579 None:intergenic 55.0%
!! GGAAGTGGTGGTAGTGGTGG+TGG + chr4_4:48306214-48306233 Msa0684730:CDS 60.0%
!! AGTGGTGGTAGTGGTGGTGG+TGG + chr4_4:48306217-48306236 Msa0684730:CDS 60.0%
TAGTGGCAGGCGTGGAGAAG+TGG - chr4_4:48307167-48307186 None:intergenic 60.0%
ACTTCTCCACGCCTGCCACT+AGG + chr4_4:48307166-48307185 Msa0684730:intron 60.0%
AAGTAGCCTAGTGGCAGGCG+TGG - chr4_4:48307175-48307194 None:intergenic 60.0%
TGCTAGCTACCTTGGTCGGC+AGG + chr4_4:48307313-48307332 Msa0684730:intron 60.0%
GCAGCAAAACCTGCCGACCA+AGG - chr4_4:48307325-48307344 None:intergenic 60.0%
CCCCTTAGGTACCACATGGG+AGG + chr4_4:48307546-48307565 Msa0684730:CDS 60.0%
!! GGTGGTAGTGGTGGTGGTGG+TGG + chr4_4:48306220-48306239 Msa0684730:CDS 65.0%
!! GGTAGTGGTGGTGGTGGTGG+TGG + chr4_4:48306223-48306242 Msa0684730:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 48305155 48308964 48305155 ID=Msa0684730;Name=Msa0684730
chr4_4 mRNA 48305155 48308964 48305155 ID=Msa0684730-mRNA-1;Parent=Msa0684730;Name=Msa0684730-mRNA-1;_AED=0.14;_eAED=0.14;_QI=398|0.8|0.66|1|0.8|0.66|6|129|387
chr4_4 exon 48305155 48305499 48305155 ID=Msa0684730-mRNA-1:exon:11965;Parent=Msa0684730-mRNA-1
chr4_4 exon 48305948 48306604 48305948 ID=Msa0684730-mRNA-1:exon:11966;Parent=Msa0684730-mRNA-1
chr4_4 exon 48307335 48307646 48307335 ID=Msa0684730-mRNA-1:exon:11967;Parent=Msa0684730-mRNA-1
chr4_4 exon 48308023 48308117 48308023 ID=Msa0684730-mRNA-1:exon:11968;Parent=Msa0684730-mRNA-1
chr4_4 exon 48308586 48308651 48308586 ID=Msa0684730-mRNA-1:exon:11969;Parent=Msa0684730-mRNA-1
chr4_4 exon 48308749 48308964 48308749 ID=Msa0684730-mRNA-1:exon:11970;Parent=Msa0684730-mRNA-1
chr4_4 five_prime_UTR 48305155 48305499 48305155 ID=Msa0684730-mRNA-1:five_prime_utr;Parent=Msa0684730-mRNA-1
chr4_4 five_prime_UTR 48305948 48306000 48305948 ID=Msa0684730-mRNA-1:five_prime_utr;Parent=Msa0684730-mRNA-1
chr4_4 CDS 48306001 48306604 48306001 ID=Msa0684730-mRNA-1:cds;Parent=Msa0684730-mRNA-1
chr4_4 CDS 48307335 48307646 48307335 ID=Msa0684730-mRNA-1:cds;Parent=Msa0684730-mRNA-1
chr4_4 CDS 48308023 48308117 48308023 ID=Msa0684730-mRNA-1:cds;Parent=Msa0684730-mRNA-1
chr4_4 CDS 48308586 48308651 48308586 ID=Msa0684730-mRNA-1:cds;Parent=Msa0684730-mRNA-1
chr4_4 CDS 48308749 48308835 48308749 ID=Msa0684730-mRNA-1:cds;Parent=Msa0684730-mRNA-1
chr4_4 three_prime_UTR 48308836 48308964 48308836 ID=Msa0684730-mRNA-1:three_prime_utr;Parent=Msa0684730-mRNA-1
Gene Sequence

>Msa0684730

ATGGAGTCAGATCTTCAGCAGCATCCAACAATGTTTCTAGATCATCAAAATCATCATCAACAACAAATGAATTCAGGGTTAACACGGTTTAAATCTGCTCCAAGTTCATATTTTTCAAATATCATTGATAAAGAGTTTTATGAGCATCTTTTCAATAAACCTTCAAGTCCTGAAACAGAAAGAGTTTTTGCAAGGTTTATGAATAGTCTTAGTGGAAGTGGTGGTAGTGGTGGTGGTGGTGGTGGCGCTGAAAGTGTTTCTGTTACAGCTTCTATAGCTCCTATAACTGATTCAGTAGTTGATTCATTGACTCAGAATCTATCAACTGTTCAACAGCAACAGCTTCCTATAGTTAAGGAAGAGGTTGATCAACAATCTCAAACTATGCAAACAATGAATAACAATGAATCTGTGGAACTTCAACAACTTCAAAGACAACAAAGTAATAATTTGAGTAATTATGGTTCTTCTGCTGCTCCTCAGAGTTTTTACCATAATTCAGGAAGACCACCTTTACCGAATCAAATGAAGACCGGTCGGTCTAGTCTTATTAGACATGGTAGTTCACCTGCTGGATTGTTTTCAAACATTAACATTGATACTGGTTTTGCTGCTATGAGAGGAATAGGAACTATGGGAGCTGCTAACAGCGCTAGCAAAGAAGCAAATTTTTCTTCTTCTGCGGTACGGTTAAAGAATGCTCCAAACTATGCCTCACCGTTAGGAGCTGAAATCGGGAGTAATAGCATTCCACGAAACAATCTTGAACCTGAAGGTTTTGCTGAAACTCGGGGTAACGATTTTATCCCGGGTTTCCCCTTAGGTACCACATGGGAGGATACTGCGATGATATCTGACAATATTACTGGCCTAAAAAGATACAGAGATGATGATGATGTAAAACCATTTCCTCCAGCCATTGAGAAGTTTTTGCAGTTCTCAGATTCTGTTCCGTGCAAAATTCGTGCTAAACGTGGCTGTGCCACTCACCCAAGAAGCATTGCAGAAAGGGTTAGAAGAACTAAAATTAGCGAGCGAATGAGGAAACTACAGGATCTCGTGCCAAACATGGATAAGCAAACAAACACATCAGACATGTTGGACTTGGCTGTTGAGTACATTAAAGACCTACAAAACCAAGTTGAGGTATGTACAAACAATTGA
Protein sequence

>Msa0684730

MESDLQQHPTMFLDHQNHHQQQMNSGLTRFKSAPSSYFSNIIDKEFYEHLFNKPSSPETERVFARFMNSLSGSGGSGGGGGGAESVSVTASIAPITDSVVDSLTQNLSTVQQQQLPIVKEEVDQQSQTMQTMNNNESVELQQLQRQQSNNLSNYGSSAAPQSFYHNSGRPPLPNQMKTGRSSLIRHGSSPAGLFSNINIDTGFAAMRGIGTMGAANSASKEANFSSSAVRLKNAPNYASPLGAEIGSNSIPRNNLEPEGFAETRGNDFIPGFPLGTTWEDTAMISDNITGLKRYRDDDDVKPFPPAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQVEVCTNN*