AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0690870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0690870 MtrunA17_Chr4g0039741 95.480 354 4 1 1 354 1 342 0.0 690
Msa0690870 MtrunA17_Chr4g0039751 81.564 358 48 4 1 354 1 344 0.0 590
Msa0690870 MtrunA17_Chr7g0269641 67.539 191 52 4 21 208 2 185 3.32e-79 241
Msa0690870 MtrunA17_Chr7g0269651 65.432 81 26 1 267 347 1 79 1.48e-26 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0690870 AT5G03415.1 61.995 371 91 9 21 354 28 385 9.76e-144 412
Msa0690870 AT5G03415.2 60.108 371 92 10 21 354 28 379 1.59e-135 391
Msa0690870 AT5G02470.3 49.130 230 96 4 63 291 32 241 3.36e-72 226
Msa0690870 AT5G02470.1 49.130 230 96 4 63 291 32 241 3.36e-72 226
Msa0690870 AT5G02470.2 49.130 230 96 4 63 291 32 241 3.36e-72 226

Find 177 sgRNAs with CRISPR-Local

Find 684 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTATATATTGGTTGGTATT+TGG 0.122069 4_4:+58785835 Msa0690870:three_prime_UTR
AATCACAAAGGTATATTAAT+TGG 0.132489 4_4:-58790772 None:intergenic
ATGTACAGACATGCTTAATT+AGG 0.206763 4_4:-58790732 None:intergenic
GTTCTCAAGGCAATGGATTT+TGG 0.207282 4_4:+58785263 Msa0690870:CDS
TGGATATTAGTTGTGGTATT+TGG 0.212018 4_4:+58791056 Msa0690870:three_prime_UTR
TTGGCGGATGCTAACGATTT+AGG 0.230171 4_4:+58781276 None:intergenic
TTCGGGATTCACTAATTTAC+AGG 0.232522 4_4:+58785776 Msa0690870:three_prime_UTR
CTGTTTGTTTCTTTATCGTT+TGG 0.245613 4_4:+58785601 Msa0690870:three_prime_UTR
TATGGATATATGCTATATAT+TGG 0.265942 4_4:+58785824 Msa0690870:three_prime_UTR
TGTTTGTTTCTTTATCGTTT+GGG 0.268735 4_4:+58785602 Msa0690870:three_prime_UTR
TCCACTCCCTGGAATATTAA+AGG 0.271571 4_4:+58785424 Msa0690870:CDS
CGTTTGCCTCTTTATTGTTT+AGG 0.272662 4_4:+58790846 Msa0690870:three_prime_UTR
CGAGGGAAAGAGGAGATCTT+AGG 0.279392 4_4:-58781381 None:intergenic
GGTTGTGGAACTACGCTTTC+CGG 0.284948 4_4:+58781636 Msa0690870:CDS
TATTATTGCTACAAGTTTGT+AGG 0.286595 4_4:+58784270 Msa0690870:CDS
TGTCCTGTTGCTTGTGTTGT+TGG 0.290846 4_4:+58785874 Msa0690870:three_prime_UTR
ATTGTTCATTTCGTTGAATA+AGG 0.299922 4_4:-58784302 None:intergenic
TTACAAATTACACTGTAAAT+CGG 0.306471 4_4:-58791017 None:intergenic
TATACCTGAACCAGAATAAA+AGG 0.312486 4_4:-58784366 None:intergenic
TAAATGTAGTAAATGATAAA+TGG 0.318350 4_4:-58785649 None:intergenic
TATACAACATAGGTTACTTT+CGG 0.325008 4_4:+58785758 Msa0690870:three_prime_UTR
ATACAACATAGGTTACTTTC+GGG 0.332484 4_4:+58785759 Msa0690870:three_prime_UTR
ACTCTTGCCTTTAATATTCC+AGG 0.333887 4_4:-58785431 None:intergenic
TGATGCTCTGAATGTTCTTA+TGG 0.333958 4_4:+58783851 Msa0690870:CDS
TACAAATTACACTGTAAATC+GGG 0.337435 4_4:-58791016 None:intergenic
AACCTTTCATACTAAATTGC+CGG 0.339281 4_4:-58782635 None:intergenic
TCCTGCTCGTTGAGCCTGAT+TGG 0.340052 4_4:-58781659 None:intergenic
TGGTGGTTTGTCCCCTGATC+AGG 0.346346 4_4:+58783685 Msa0690870:CDS
CAGTTTCAAATATGTTAGTT+AGG 0.354238 4_4:+58785387 Msa0690870:CDS
TGAAATTAATCCTATGTTGT+TGG 0.359723 4_4:-58790987 None:intergenic
AGGGTCCTTGTGAGGCTCTC+TGG 0.363828 4_4:+58791109 Msa0690870:three_prime_UTR
GATTAACAGCGGCGGTTATT+CGG 0.366058 4_4:-58781404 None:intergenic
AAATGACTTGTCTGTATTGA+TGG 0.366464 4_4:-58790800 None:intergenic
GAAGATAAGAAAACCTGATC+AGG 0.380867 4_4:-58783698 None:intergenic
CGAAGAGGACGAGGAATTGA+TGG 0.402627 4_4:+58781614 Msa0690870:CDS
ACTACGCTTTCCGGCCAATC+AGG 0.405110 4_4:+58781645 Msa0690870:CDS
GAGAATCAGTTGTAATAAAT+CGG 0.409087 4_4:+58785730 Msa0690870:three_prime_UTR
TATTATGAAGGTCTATAATT+CGG 0.409699 4_4:-58785535 None:intergenic
ATACCAACAACACAAGCAAC+AGG 0.415272 4_4:-58785877 None:intergenic
AGAGAGAGGTGAGGTTGTGA+TGG 0.419891 4_4:-58781426 None:intergenic
TTAAATAGACACAGCGTCTT+GGG 0.420475 4_4:+58784052 Msa0690870:intron
ATCAATACAGACAAGTCATT+TGG 0.422322 4_4:+58790802 Msa0690870:three_prime_UTR
TAGGAGTTATGCAGGTAGGA+TGG 0.425576 4_4:+58781295 Msa0690870:five_prime_UTR
TGTACAGACATGCTTAATTA+GGG 0.426762 4_4:-58790731 None:intergenic
GGCTCAACGAGCAGGAGTGC+CGG 0.432075 4_4:+58781666 Msa0690870:CDS
GCCTTTAATATTCCAGGGAG+TGG 0.432840 4_4:-58785425 None:intergenic
ATCACAAAGGTATATTAATT+GGG 0.436078 4_4:-58790771 None:intergenic
GAAAGTAACCTATGTTGTAT+AGG 0.443564 4_4:-58785756 None:intergenic
AGACACAGCGTCTTGGGCTT+AGG 0.448668 4_4:+58784058 Msa0690870:intron
CTTTATCGTTTGGGGTAGAC+TGG 0.450774 4_4:+58785611 Msa0690870:three_prime_UTR
TCCTCATGCAACTGTGGAAG+TGG 0.457569 4_4:+58784894 Msa0690870:CDS
TTCTTCATATTGCGTGCCCT+AGG 0.459014 4_4:+58781507 Msa0690870:five_prime_UTR
GTTAGTCATCAGTACAGCTT+TGG 0.461202 4_4:+58785558 Msa0690870:three_prime_UTR
ATTAAATAGACACAGCGTCT+TGG 0.463317 4_4:+58784051 Msa0690870:intron
GCCAATCAGGCTCAACGAGC+AGG 0.466675 4_4:+58781658 Msa0690870:CDS
GATATATGCTATATATTGGT+TGG 0.468174 4_4:+58785828 Msa0690870:three_prime_UTR
GGGGAAGGTTCTAGCATGTC+AGG 0.468504 4_4:+58785338 Msa0690870:CDS
AGACTCACGCAACTACTGCC+TGG 0.468595 4_4:-58781791 None:intergenic
GCTAGAGAGATCAGAGATCA+TGG 0.468871 4_4:+58790956 Msa0690870:three_prime_UTR
GACGAGGAATTGATGGGTTG+TGG 0.469944 4_4:+58781621 Msa0690870:CDS
AGCTTCAAAATCCTCACTAC+AGG 0.476383 4_4:+58781559 Msa0690870:five_prime_UTR
GGCTATGAATATTATTTCCA+AGG 0.477616 4_4:+58783872 Msa0690870:CDS
GGGGACAAACCACCATTGCT+TGG 0.478427 4_4:-58783677 None:intergenic
AGGTAAAGATACACCTCCAC+TGG 0.479385 4_4:-58784346 None:intergenic
CTGCTCAAGCTCCTGCAGAT+AGG 0.480130 4_4:-58784103 None:intergenic
GAGTGATATTGAAGAACTAA+AGG 0.483152 4_4:+58783938 Msa0690870:CDS
GAGGGAAAGAGGAGATCTTA+GGG 0.485171 4_4:-58781380 None:intergenic
GCTCAACGAGCAGGAGTGCC+GGG 0.485828 4_4:+58781667 Msa0690870:CDS
CTCCGGCAATTTAGTATGAA+AGG 0.485877 4_4:+58782633 Msa0690870:CDS
AGGAGTTATGCAGGTAGGAT+GGG 0.489677 4_4:+58781296 Msa0690870:five_prime_UTR
GCTCGTTGAGCCTGATTGGC+CGG 0.490544 4_4:-58781655 None:intergenic
TCTGCCATGGTAGTAATTGA+TGG 0.499825 4_4:-58790889 None:intergenic
AATGAACAATTATATAGCTC+AGG 0.501710 4_4:+58784315 Msa0690870:CDS
GGGACAAACCACCATTGCTT+GGG 0.502306 4_4:-58783676 None:intergenic
TATACAGACATGCTTAAGTA+AGG 0.506147 4_4:-58785495 None:intergenic
AGCCGGAGTGAGCAGACCAC+GGG 0.509849 4_4:+58781699 Msa0690870:CDS
GACTCACGCAACTACTGCCT+GGG 0.512394 4_4:-58781790 None:intergenic
ATAAGAATGGAAGAGGGCTC+CGG 0.512718 4_4:+58782616 Msa0690870:CDS
GTCCGTGGACGAAGAGGACG+AGG 0.514783 4_4:+58781605 Msa0690870:CDS
CTCTTGCCTTTAATATTCCA+GGG 0.515553 4_4:-58785430 None:intergenic
ACTGATTCTCTCTTACTACA+TGG 0.516286 4_4:-58785717 None:intergenic
TGATACAAAACAAGATGCAT+TGG 0.516748 4_4:-58791080 None:intergenic
TGTGAGAAGGTAGAAAGTAA+AGG 0.516897 4_4:+58783144 Msa0690870:CDS
TGATGACGATGCTGCTTCCC+AGG 0.519370 4_4:+58781773 Msa0690870:CDS
GGTTATTCGGCGAGGGAAAG+AGG 0.520667 4_4:-58781391 None:intergenic
CAATTATGTTCTCAAGGCAA+TGG 0.525211 4_4:+58785256 Msa0690870:CDS
CCGACATCACCTCCACTCCC+TGG 0.527073 4_4:+58785413 Msa0690870:CDS
TTCCTCGTCCTCTTCGTCCA+CGG 0.529381 4_4:-58781607 None:intergenic
TCTTCATATTGCGTGCCCTA+GGG 0.533444 4_4:+58781508 Msa0690870:five_prime_UTR
GTCTAACCTAAACAATAAAG+AGG 0.536603 4_4:-58790852 None:intergenic
ACTTATGTGGATATTAGTTG+TGG 0.538450 4_4:+58791049 Msa0690870:three_prime_UTR
TTGGTAGGTCAGCAGCAGCT+TGG 0.538837 4_4:+58790821 Msa0690870:three_prime_UTR
TAACGATTTAGGAGTTATGC+AGG 0.543605 4_4:+58781287 None:intergenic
CTAAACAATAAAGAGGCAAA+CGG 0.550320 4_4:-58790845 None:intergenic
CTGATTCTCTCTTACTACAT+GGG 0.550977 4_4:-58785716 None:intergenic
GTCAGGCATGTATCAATCAC+AGG 0.555543 4_4:+58785355 Msa0690870:CDS
GTTTGTTTCTTTATCGTTTG+GGG 0.556298 4_4:+58785603 Msa0690870:three_prime_UTR
ACAGGACAAGCAAGATGCAT+TGG 0.558929 4_4:-58785859 None:intergenic
TTGTCGTCATGCAGCTCGAA+AGG 0.559999 4_4:-58785236 None:intergenic
AAGATAAGAAAACCTGATCA+GGG 0.563158 4_4:-58783697 None:intergenic
CACACAATATTGCGGATGGA+GGG 0.564114 4_4:+58785318 Msa0690870:CDS
GGCTTAGGAGTAGAATTGAA+AGG 0.565800 4_4:+58784073 Msa0690870:CDS
TTTAATATTCCAGGGAGTGG+AGG 0.566833 4_4:-58785422 None:intergenic
TGTAGTAAATGATAAATGGT+AGG 0.568227 4_4:-58785645 None:intergenic
GTCTGCTCACTCCGGCTAGA+CGG 0.569869 4_4:-58781693 None:intergenic
TTTGAGAGCAGCGTTATCAC+CGG 0.570401 4_4:-58781730 None:intergenic
TCAAAATCCTCACTACAGGA+TGG 0.572606 4_4:+58781563 Msa0690870:exon
CAGACCACGGGGACAGCCGC+CGG 0.573222 4_4:+58781711 Msa0690870:CDS
GTGCCGGGTTACCGTCTAGC+CGG 0.573556 4_4:+58781682 Msa0690870:CDS
AAGGAAAGCAGCCTATCTGC+AGG 0.574961 4_4:+58784092 Msa0690870:CDS
AATATTGCGGATGGAGGGGA+AGG 0.575401 4_4:+58785323 Msa0690870:CDS
TTCTTCAATATCACTCAGAC+TGG 0.575701 4_4:-58783931 None:intergenic
CTGATGACTAACTATTATGA+AGG 0.576595 4_4:-58785547 None:intergenic
CCAGGGAGTGGAGGTGATGT+CGG 0.580031 4_4:-58785413 None:intergenic
GGAATGGAGTCCAACAACAT+AGG 0.581085 4_4:+58790977 Msa0690870:three_prime_UTR
ACACAATATTGCGGATGGAG+GGG 0.585147 4_4:+58785319 Msa0690870:CDS
CAAAATCCTCACTACAGGAT+GGG 0.585807 4_4:+58781564 Msa0690870:exon
AGAGATCAGAGATCATGGAA+TGG 0.587031 4_4:+58790961 Msa0690870:three_prime_UTR
GAGGAGATCTTAGGGAACGC+GGG 0.588075 4_4:-58781372 None:intergenic
TAGGGCACGCAATATGAAGA+AGG 0.591113 4_4:-58781505 None:intergenic
CATTTGATAGGGTCCTTGTG+AGG 0.596609 4_4:+58791101 Msa0690870:three_prime_UTR
ACAAATTACACTGTAAATCG+GGG 0.598164 4_4:-58791015 None:intergenic
CAGCGGCGGTTATTCGGCGA+GGG 0.598249 4_4:-58781398 None:intergenic
TCCCCGTGGTCTGCTCACTC+CGG 0.599110 4_4:-58781701 None:intergenic
ACACACAATATTGCGGATGG+AGG 0.602906 4_4:+58785317 Msa0690870:CDS
GAAGAGGACGAGGAATTGAT+GGG 0.603441 4_4:+58781615 Msa0690870:CDS
CTAAATTGATCGAAAACGAA+GGG 0.603489 4_4:-58781538 None:intergenic
GATCTCTCTAGCTACAATGC+GGG 0.606530 4_4:-58790945 None:intergenic
TGACGACAATTATGTTCTCA+AGG 0.607641 4_4:+58785250 Msa0690870:CDS
GATTTAGGAGTTATGCAGGT+AGG 0.608300 4_4:+58781291 Msa0690870:five_prime_UTR
TCCACTTCCACAGTTGCATG+AGG 0.608745 4_4:-58784895 None:intergenic
GCTAAATTGATCGAAAACGA+AGG 0.611313 4_4:-58781539 None:intergenic
GTCATCAGTACAGCTTTGGT+AGG 0.613336 4_4:+58785562 Msa0690870:three_prime_UTR
GTTACACACAATATTGCGGA+TGG 0.615879 4_4:+58785314 Msa0690870:CDS
TCGGGATTCACTAATTTACA+GGG 0.619569 4_4:+58785777 Msa0690870:three_prime_UTR
TGATTCTCTCTTACTACATG+GGG 0.619753 4_4:-58785715 None:intergenic
ACAGCGGCGGTTATTCGGCG+AGG 0.626330 4_4:-58781399 None:intergenic
TGCGTTCCCATCCTGTAGTG+AGG 0.626916 4_4:-58781570 None:intergenic
CCATCCATCAATTACTACCA+TGG 0.628013 4_4:+58790885 Msa0690870:three_prime_UTR
GGGAGTGGAGGTGATGTCGG+AGG 0.628434 4_4:-58785410 None:intergenic
AGGAGATCTTAGGGAACGCG+GGG 0.629465 4_4:-58781371 None:intergenic
TCAATCGTCCGTGGACGAAG+AGG 0.631369 4_4:+58781599 Msa0690870:CDS
ATCGGTAACCTATACAACAT+AGG 0.634392 4_4:+58785748 Msa0690870:three_prime_UTR
ACTTGTAGCAATAATAAAAG+CGG 0.636430 4_4:-58784263 None:intergenic
ATGGACAGTACGAAACGGAA+GGG 0.638006 4_4:-58785909 None:intergenic
CAATGTTACACACAATATTG+CGG 0.641067 4_4:+58785310 Msa0690870:CDS
TCAGGAAATCCTCCCAGTGG+AGG 0.644133 4_4:+58784333 Msa0690870:CDS
CCATGGTAGTAATTGATGGA+TGG 0.647614 4_4:-58790885 None:intergenic
ATACAGACAAGTCATTTGGT+AGG 0.648893 4_4:+58790806 Msa0690870:three_prime_UTR
GACACGTCCTCATGCAACTG+TGG 0.649899 4_4:+58784888 Msa0690870:intron
TAGCCGGAGTGAGCAGACCA+CGG 0.651050 4_4:+58781698 Msa0690870:CDS
TGTGTAACATTGTCACTCTG+TGG 0.651492 4_4:-58785299 None:intergenic
ATCACCGGCGGCTGTCCCCG+TGG 0.656058 4_4:-58781715 None:intergenic
ACTCCGGCTAGACGGTAACC+CGG 0.657214 4_4:-58781685 None:intergenic
AACATATTTGAAACTGACTG+AGG 0.659643 4_4:-58785380 None:intergenic
AGGAAGAACAACTTACAATG+AGG 0.663086 4_4:+58783164 Msa0690870:CDS
AGAGGAGATCTTAGGGAACG+CGG 0.674684 4_4:-58781373 None:intergenic
GAGCATCATAGACCCTTCGA+CGG 0.678223 4_4:-58783836 None:intergenic
GGTAAAGATACACCTCCACT+GGG 0.679973 4_4:-58784345 None:intergenic
AGCTCAGGAAATCCTCCCAG+TGG 0.682103 4_4:+58784330 Msa0690870:CDS
GCAGCCGCATCAATCGTCCG+TGG 0.683605 4_4:+58781590 Msa0690870:CDS
AGATAAGAAAACCTGATCAG+GGG 0.686331 4_4:-58783696 None:intergenic
TTGTGATGGATTAACAGCGG+CGG 0.686374 4_4:-58781412 None:intergenic
TTGATGGCTAACAATCACAA+AGG 0.688839 4_4:-58790784 None:intergenic
ATAGGTGGCAGATGAACTTG+TGG 0.689893 4_4:+58783640 Msa0690870:intron
ATTCTCTCTTACTACATGGG+GGG 0.694106 4_4:-58785713 None:intergenic
GATTCTCTCTTACTACATGG+GGG 0.695878 4_4:-58785714 None:intergenic
TCGTCCACGGACGATTGATG+CGG 0.696336 4_4:-58781594 None:intergenic
GAGAGCAGCGTTATCACCGG+CGG 0.697043 4_4:-58781727 None:intergenic
ATAGACCAGAGAGCCTCACA+AGG 0.701162 4_4:-58791114 None:intergenic
TGATCTCTCTAGCTACAATG+CGG 0.705794 4_4:-58790946 None:intergenic
GGGGTGATAAGAATGGAAGA+GGG 0.716134 4_4:+58782610 Msa0690870:CDS
AAAGATACACCTCCACTGGG+AGG 0.724160 4_4:-58784342 None:intergenic
ATATCACTCAGACTGGTACG+AGG 0.734989 4_4:-58783924 None:intergenic
AGGTTGTGATGGATTAACAG+CGG 0.736581 4_4:-58781415 None:intergenic
GCCGGAGTGAGCAGACCACG+GGG 0.739516 4_4:+58781700 Msa0690870:CDS
GGAGATCTTAGGGAACGCGG+GGG 0.744362 4_4:-58781370 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAAAAAAAAAAAATT+AGG - chr4_4:58783613-58783632 None:intergenic 0.0%
!!! TTTTTTAAAAAAAAAAATAT+AGG + chr4_4:58783622-58783641 Msa0690870:intron 0.0%
!! AAGTATAGATATAAATAAAA+AGG - chr4_4:58782469-58782488 None:intergenic 10.0%
!! GAAAAAAAATATAAGTAATA+CGG - chr4_4:58783568-58783587 None:intergenic 10.0%
!! AAAAAAAAAATTAGGAAATA+AGG - chr4_4:58783605-58783624 None:intergenic 10.0%
!! TTTAAAAAAAAAAATATAGG+TGG + chr4_4:58783625-58783644 Msa0690870:intron 10.0%
!! CAAAATTAAAACTAAAAAAT+AGG + chr4_4:58786149-58786168 Msa0690870:intron 10.0%
!!! TTTCAAATAAAATATTTTAC+CGG - chr4_4:58788091-58788110 None:intergenic 10.0%
!! ATATTAAATATATTCTGAAT+AGG - chr4_4:58789245-58789264 None:intergenic 10.0%
!! ATTCAGAATATATTTAATAT+AGG + chr4_4:58789245-58789264 Msa0690870:intron 10.0%
!! AAATTAATTAGTGGTTAATT+TGG + chr4_4:58782326-58782345 Msa0690870:intron 15.0%
!! TTATTTATATCTATACTTTG+TGG + chr4_4:58782471-58782490 Msa0690870:intron 15.0%
!! CTATTTAAAAAACTAATTGA+AGG - chr4_4:58783415-58783434 None:intergenic 15.0%
!!! CTTCAATTAGTTTTTTAAAT+AGG + chr4_4:58783413-58783432 Msa0690870:intron 15.0%
!!! ATCTTATGAACTTATTTTTT+TGG + chr4_4:58783771-58783790 Msa0690870:intron 15.0%
!!! TCTTATGAACTTATTTTTTT+GGG + chr4_4:58783772-58783791 Msa0690870:intron 15.0%
!!! AAATAATTTTCCCTTTTTTT+GGG + chr4_4:58784607-58784626 Msa0690870:intron 15.0%
!! TAAATGTAGTAAATGATAAA+TGG - chr4_4:58785652-58785671 None:intergenic 15.0%
!!! ATGTTTTAAAAATTTGATCA+TGG - chr4_4:58786358-58786377 None:intergenic 15.0%
!!! ATTCTAAAAAAAATTAGAGT+TGG + chr4_4:58786900-58786919 Msa0690870:intron 15.0%
!! TGATCATGATAATTATTATT+GGG + chr4_4:58788563-58788582 Msa0690870:intron 15.0%
!!! TATTATTTCTAAGGATAAAA+AGG + chr4_4:58788957-58788976 Msa0690870:intron 15.0%
!! ATCAAATTAAGCAATTAAAA+TGG - chr4_4:58789136-58789155 None:intergenic 15.0%
!!! TTGTTCATTTTGATTTTAAT+AGG + chr4_4:58790173-58790192 Msa0690870:intron 15.0%
!! GGTTGCATAAAAATAAATTT+AGG + chr4_4:58781317-58781336 Msa0690870:five_prime_UTR 20.0%
!! TATAAATCCAATTTCATGTT+TGG + chr4_4:58781879-58781898 Msa0690870:intron 20.0%
!!! AAGATTTTCAATTAGTGAAA+AGG + chr4_4:58781986-58782005 Msa0690870:intron 20.0%
!! TTTATTCAAGGTCTAAAAAA+TGG + chr4_4:58782061-58782080 Msa0690870:intron 20.0%
!! TTAAAACCTGAATTAATTAG+TGG + chr4_4:58782216-58782235 Msa0690870:intron 20.0%
!! AATTAACCACTAATTAATTC+AGG - chr4_4:58782225-58782244 None:intergenic 20.0%
!! GAATTAATTAGTGGTTAATT+TGG + chr4_4:58782225-58782244 Msa0690870:intron 20.0%
!! TTCATTGCAAAATTAATTAG+TGG + chr4_4:58782317-58782336 Msa0690870:intron 20.0%
!! TAAGAATCAATCGAAAATAA+TGG - chr4_4:58782541-58782560 None:intergenic 20.0%
!! TAAAAAGTTAAAGATCAAAG+TGG - chr4_4:58782680-58782699 None:intergenic 20.0%
!! AATCAACAATAAATTAGAGA+GGG - chr4_4:58783114-58783133 None:intergenic 20.0%
!! AAATCAACAATAAATTAGAG+AGG - chr4_4:58783115-58783134 None:intergenic 20.0%
!!! AAAAAACTGGTTTAAAGTAA+AGG - chr4_4:58783195-58783214 None:intergenic 20.0%
!! TTCTATAAATACATACATGT+TGG + chr4_4:58783337-58783356 Msa0690870:intron 20.0%
!!! TATTTGCTATTTACACATTA+AGG + chr4_4:58783738-58783757 Msa0690870:intron 20.0%
!!! CTTATGAACTTATTTTTTTG+GGG + chr4_4:58783773-58783792 Msa0690870:intron 20.0%
!!! TTGTATTTCTTTTTTATCCT+TGG - chr4_4:58783892-58783911 None:intergenic 20.0%
!! AGGATAAAAAAGAAATACAA+TGG + chr4_4:58783892-58783911 Msa0690870:CDS 20.0%
!! TAAAAAAGAAATACAATGGA+AGG + chr4_4:58783896-58783915 Msa0690870:CDS 20.0%
!! AAAAAAGAAATACAATGGAA+GGG + chr4_4:58783897-58783916 Msa0690870:CDS 20.0%
!! AATTTAAAAAATAGCAATCC+AGG - chr4_4:58784175-58784194 None:intergenic 20.0%
!! ATGTAATATATTATCATCCA+AGG - chr4_4:58784456-58784475 None:intergenic 20.0%
!!! GAAATAATTTTCCCTTTTTT+TGG + chr4_4:58784606-58784625 Msa0690870:intron 20.0%
!!! TTGTTCATTTTGATTTCAAT+AGG + chr4_4:58784938-58784957 Msa0690870:CDS 20.0%
!! TATTATGAAGGTCTATAATT+CGG - chr4_4:58785538-58785557 None:intergenic 20.0%
!! TATGGATATATGCTATATAT+TGG + chr4_4:58785824-58785843 Msa0690870:three_prime_UTR 20.0%
!! ATTTCGATGATAAACTAATA+TGG - chr4_4:58785931-58785950 None:intergenic 20.0%
!! ATTAAATCATCTTGATATAC+AGG + chr4_4:58787391-58787410 Msa0690870:intron 20.0%
!!! ATATTTAGAACACTTATCTA+GGG - chr4_4:58788032-58788051 None:intergenic 20.0%
!! AAATAGAGATTAATATTGTG+AGG + chr4_4:58788311-58788330 Msa0690870:intron 20.0%
!!! TTATCATGATAGCTTTTTTT+TGG + chr4_4:58788531-58788550 Msa0690870:intron 20.0%
!!! TATCATGATAGCTTTTTTTT+GGG + chr4_4:58788532-58788551 Msa0690870:intron 20.0%
!! GTGATCATGATAATTATTAT+TGG + chr4_4:58788562-58788581 Msa0690870:intron 20.0%
!! TTAAAGTCAAGAAATAAACT+GGG - chr4_4:58788688-58788707 None:intergenic 20.0%
!! ATTAAAGTCAAGAAATAAAC+TGG - chr4_4:58788689-58788708 None:intergenic 20.0%
!!! ATGTGATTGTTTTATATTGT+AGG + chr4_4:58788707-58788726 Msa0690870:intron 20.0%
!!! ACTATATCTGAAATTTTGAA+TGG - chr4_4:58788820-58788839 None:intergenic 20.0%
!! TAAATATATTCTGAATAGGA+TGG - chr4_4:58789241-58789260 None:intergenic 20.0%
!! ATTGTTCATTTCGTTTAATA+AGG - chr4_4:58789389-58789408 None:intergenic 20.0%
!!! TTTTATGACACTACTTAATT+AGG - chr4_4:58790285-58790304 None:intergenic 20.0%
!! AAAAGAGAGTAAACATAAAT+AGG - chr4_4:58790442-58790461 None:intergenic 20.0%
!!! ATCACAAAGGTATATTAATT+GGG - chr4_4:58790774-58790793 None:intergenic 20.0%
!!! AATCACAAAGGTATATTAAT+TGG - chr4_4:58790775-58790794 None:intergenic 20.0%
!! TTACAAATTACACTGTAAAT+CGG - chr4_4:58791020-58791039 None:intergenic 20.0%
!!! TTGTTTTGTATCATTTGATA+GGG + chr4_4:58791090-58791109 Msa0690870:three_prime_UTR 20.0%
!!! ATGCGTTCAATTTTGATTTA+GGG + chr4_4:58781951-58781970 Msa0690870:intron 25.0%
! TGAAAAGGAAAATGATATAC+TGG + chr4_4:58782001-58782020 Msa0690870:intron 25.0%
!!! AATAAAAAGGTTTTGAATCG+TGG - chr4_4:58782456-58782475 None:intergenic 25.0%
! AATAAAAACAGAGAATTGAC+AGG - chr4_4:58782507-58782526 None:intergenic 25.0%
!! CAAATAAGTTGTTTCAAACA+AGG - chr4_4:58782740-58782759 None:intergenic 25.0%
! TGACATAAACATTTGTGTAA+AGG + chr4_4:58782766-58782785 Msa0690870:intron 25.0%
! TAAACATTTGTGTAAAGGTT+TGG + chr4_4:58782771-58782790 Msa0690870:intron 25.0%
!!! GACAGAGATTTATTTTATTC+AGG + chr4_4:58783051-58783070 Msa0690870:intron 25.0%
! GTAGAGAAAATTGTCAAAAA+TGG - chr4_4:58783077-58783096 None:intergenic 25.0%
!!! TGACAATTTTCTCTACTTTT+TGG + chr4_4:58783081-58783100 Msa0690870:intron 25.0%
! ATCAACAATAAATTAGAGAG+GGG - chr4_4:58783113-58783132 None:intergenic 25.0%
!!! AGACTTTATATTTTAGAACG+TGG - chr4_4:58783295-58783314 None:intergenic 25.0%
! GATAAATCACAACATGAAAT+GGG - chr4_4:58783539-58783558 None:intergenic 25.0%
! TGATAAATCACAACATGAAA+TGG - chr4_4:58783540-58783559 None:intergenic 25.0%
! ATATTGAAGAACTAAAGGTT+TGG + chr4_4:58783943-58783962 Msa0690870:intron 25.0%
! GGTATTAAATCAATTAGAGT+GGG - chr4_4:58784142-58784161 None:intergenic 25.0%
!! CACTCTAATTGATTTAATAC+CGG + chr4_4:58784141-58784160 Msa0690870:intron 25.0%
! ACTTGTAGCAATAATAAAAG+CGG - chr4_4:58784266-58784285 None:intergenic 25.0%
! TATTATTGCTACAAGTTTGT+AGG + chr4_4:58784270-58784289 Msa0690870:CDS 25.0%
! ATTGTTCATTTCGTTGAATA+AGG - chr4_4:58784305-58784324 None:intergenic 25.0%
! AATGAACAATTATATAGCTC+AGG + chr4_4:58784315-58784334 Msa0690870:CDS 25.0%
!! TGTATCTTTACCTTTTATTC+TGG + chr4_4:58784356-58784375 Msa0690870:CDS 25.0%
! TGGATAAAATGACCAAAAAA+AGG - chr4_4:58784410-58784429 None:intergenic 25.0%
! AATTGAACAACAATTTCTAC+TGG - chr4_4:58784430-58784449 None:intergenic 25.0%
! ATTACATGAACTTAAGTAGT+TGG + chr4_4:58784500-58784519 Msa0690870:intron 25.0%
! TAGTATATAGCAGTAACTTT+CGG - chr4_4:58784654-58784673 None:intergenic 25.0%
! ATAACATAGACCCATAAAAT+AGG - chr4_4:58784724-58784743 None:intergenic 25.0%
!! TATTTTATGGGTCTATGTTA+TGG + chr4_4:58784723-58784742 Msa0690870:intron 25.0%
!! ATTTTATGGGTCTATGTTAT+GGG + chr4_4:58784724-58784743 Msa0690870:intron 25.0%
! CTTTATGATACCACAAAATT+AGG - chr4_4:58785049-58785068 None:intergenic 25.0%
!!! ATTTTCAAGTAGATAAGTCT+TGG + chr4_4:58785127-58785146 Msa0690870:intron 25.0%
!!! TTTTCAAGTAGATAAGTCTT+GGG + chr4_4:58785128-58785147 Msa0690870:intron 25.0%
! CAGTTTCAAATATGTTAGTT+AGG + chr4_4:58785387-58785406 Msa0690870:CDS 25.0%
!! TGTTTGTTTCTTTATCGTTT+GGG + chr4_4:58785602-58785621 Msa0690870:three_prime_UTR 25.0%
! TGTAGTAAATGATAAATGGT+AGG - chr4_4:58785648-58785667 None:intergenic 25.0%
! GAGAATCAGTTGTAATAAAT+CGG + chr4_4:58785730-58785749 Msa0690870:three_prime_UTR 25.0%
!! TATACAACATAGGTTACTTT+CGG + chr4_4:58785758-58785777 Msa0690870:three_prime_UTR 25.0%
! GATATATGCTATATATTGGT+TGG + chr4_4:58785828-58785847 Msa0690870:three_prime_UTR 25.0%
! TACCTATAATCAAATCATTC+AGG + chr4_4:58786303-58786322 Msa0690870:intron 25.0%
! ACCTATAATCAAATCATTCA+GGG + chr4_4:58786304-58786323 Msa0690870:intron 25.0%
! AGTCAACCTTTGATATAAAT+GGG - chr4_4:58786745-58786764 None:intergenic 25.0%
! ATTTATATCAAAGGTTGACT+CGG + chr4_4:58786745-58786764 Msa0690870:intron 25.0%
! AAAAACCTTTCATGCTAAAT+TGG - chr4_4:58787646-58787665 None:intergenic 25.0%
!!! CATGAGAAATTTTGAAATTC+AGG + chr4_4:58787774-58787793 Msa0690870:intron 25.0%
!! CATATTTAGAACACTTATCT+AGG - chr4_4:58788033-58788052 None:intergenic 25.0%
! GATACATATGAAATACTTCA+AGG - chr4_4:58788069-58788088 None:intergenic 25.0%
!! TGAAGTATTTCATATGTATC+CGG + chr4_4:58788069-58788088 Msa0690870:intron 25.0%
! TATCCAATATGTATCTGATA+CGG + chr4_4:58788171-58788190 Msa0690870:intron 25.0%
! AATCTCTATTTACAAAGCAT+GGG - chr4_4:58788302-58788321 None:intergenic 25.0%
! TAATCTCTATTTACAAAGCA+TGG - chr4_4:58788303-58788322 None:intergenic 25.0%
!!! ATTAGCTTCTAATTGATTTG+TGG + chr4_4:58788358-58788377 Msa0690870:intron 25.0%
!!! TGATTGTTTTATATTGTAGG+TGG + chr4_4:58788710-58788729 Msa0690870:intron 25.0%
!!! TATTGTAGACTTACTTTTTG+TGG + chr4_4:58788848-58788867 Msa0690870:intron 25.0%
!!! ATTGTAGACTTACTTTTTGT+GGG + chr4_4:58788849-58788868 Msa0690870:intron 25.0%
! AGGATAAAAAGGAAATACAA+TGG + chr4_4:58788968-58788987 Msa0690870:intron 25.0%
! TAAAAAGGAAATACAATGGA+AGG + chr4_4:58788972-58788991 Msa0690870:intron 25.0%
! AAAAAGGAAATACAATGGAA+GGG + chr4_4:58788973-58788992 Msa0690870:intron 25.0%
! AATGAACAATTATATAGCTC+TGG + chr4_4:58784315-58784334 Msa0690870:CDS 25.0%
!! TGTATCTTTACCTTTTATTC+TGG + chr4_4:58784356-58784375 Msa0690870:CDS 25.0%
! GAAACAAAACAAAACAATAG+AGG - chr4_4:58789491-58789510 None:intergenic 25.0%
! AATACAAATGCTTACAAAAG+CGG - chr4_4:58789825-58789844 None:intergenic 25.0%
! AAATATTTCATCAGCTCATT+TGG + chr4_4:58789895-58789914 Msa0690870:intron 25.0%
! GTGTCATAAAATCAGTAATT+TGG + chr4_4:58790294-58790313 Msa0690870:intron 25.0%
! AAAAGTTACCACAAAAAATG+TGG - chr4_4:58790925-58790944 None:intergenic 25.0%
! TGAAATTAATCCTATGTTGT+TGG - chr4_4:58790990-58791009 None:intergenic 25.0%
! TACAAATTACACTGTAAATC+GGG - chr4_4:58791019-58791038 None:intergenic 25.0%
!!! GTAAAGTTTTTCAACTTATG+TGG + chr4_4:58791036-58791055 Msa0690870:three_prime_UTR 25.0%
!!! CTTGTTTTGTATCATTTGAT+AGG + chr4_4:58791089-58791108 Msa0690870:three_prime_UTR 25.0%
CTAAATTGATCGAAAACGAA+GGG - chr4_4:58781541-58781560 None:intergenic 30.0%
AGCTAAACCAAACATGAAAT+TGG - chr4_4:58781889-58781908 None:intergenic 30.0%
! ATTTCATGTTTGGTTTAGCT+TGG + chr4_4:58781889-58781908 Msa0690870:intron 30.0%
! TTTCATGTTTGGTTTAGCTT+GGG + chr4_4:58781890-58781909 Msa0690870:intron 30.0%
!!! CATGCGTTCAATTTTGATTT+AGG + chr4_4:58781950-58781969 Msa0690870:intron 30.0%
CCTTGAATAAAATGTACCAT+TGG - chr4_4:58782052-58782071 None:intergenic 30.0%
! CCAATGGTACATTTTATTCA+AGG + chr4_4:58782049-58782068 Msa0690870:intron 30.0%
TCTAAAAAATGGTCCGTTAT+AGG + chr4_4:58782072-58782091 Msa0690870:intron 30.0%
AACATAGTGAACAAACGTTA+TGG + chr4_4:58782114-58782133 Msa0690870:intron 30.0%
TTGTTCTATACCAATTACCA+TGG - chr4_4:58782146-58782165 None:intergenic 30.0%
! GCAATGAATTTTTCATAGAC+TGG - chr4_4:58782305-58782324 None:intergenic 30.0%
AACCTTTCATACTAAATTGC+CGG - chr4_4:58782638-58782657 None:intergenic 30.0%
! CTTTTAACGTGGTAAAAAAC+TGG - chr4_4:58783208-58783227 None:intergenic 30.0%
! GTTTTGTCAATGATTAAGCA+CGG + chr4_4:58783435-58783454 Msa0690870:intron 30.0%
! TAATTATTAGCCTCAGAAAC+TGG + chr4_4:58783487-58783506 Msa0690870:intron 30.0%
AAGATAAGAAAACCTGATCA+GGG - chr4_4:58783700-58783719 None:intergenic 30.0%
GGCTATGAATATTATTTCCA+AGG + chr4_4:58783872-58783891 Msa0690870:CDS 30.0%
GAGTGATATTGAAGAACTAA+AGG + chr4_4:58783938-58783957 Msa0690870:CDS 30.0%
CGGTATTAAATCAATTAGAG+TGG - chr4_4:58784143-58784162 None:intergenic 30.0%
ACAAAAACAACGTAGTTTGA+TGG - chr4_4:58784220-58784239 None:intergenic 30.0%
!!! TTTACCTTTTATTCTGGTTC+AGG + chr4_4:58784362-58784381 Msa0690870:CDS 30.0%
TATACCTGAACCAGAATAAA+AGG - chr4_4:58784369-58784388 None:intergenic 30.0%
! ATTGTTGTTCAATTATGCCT+TGG + chr4_4:58784436-58784455 Msa0690870:intron 30.0%
AGTTACTGCTATATACTAGA+TGG + chr4_4:58784656-58784675 Msa0690870:intron 30.0%
GTCTATGTTATGGGTTTATA+CGG + chr4_4:58784733-58784752 Msa0690870:intron 30.0%
AATCAAATATCAGCACCAAT+AGG - chr4_4:58784844-58784863 None:intergenic 30.0%
!! GTTATGATGTGATTAGCTTT+AGG + chr4_4:58784995-58785014 Msa0690870:intron 30.0%
AGGAAGTCTAAACATTAAGA+CGG - chr4_4:58785029-58785048 None:intergenic 30.0%
! GTTTAGACTTCCTAATTTTG+TGG + chr4_4:58785036-58785055 Msa0690870:intron 30.0%
! TTTTGTGGTATCATAAAGTC+CGG + chr4_4:58785051-58785070 Msa0690870:intron 30.0%
! CAGATAAATTTTCCAACACA+GGG - chr4_4:58785183-58785202 None:intergenic 30.0%
AGAGAGTAAACATGAATAAG+TGG - chr4_4:58785206-58785225 None:intergenic 30.0%
CAATGTTACACACAATATTG+CGG + chr4_4:58785310-58785329 Msa0690870:CDS 30.0%
! AACATATTTGAAACTGACTG+AGG - chr4_4:58785383-58785402 None:intergenic 30.0%
TATACAGACATGCTTAAGTA+AGG - chr4_4:58785498-58785517 None:intergenic 30.0%
CTGATGACTAACTATTATGA+AGG - chr4_4:58785550-58785569 None:intergenic 30.0%
! CTGTTTGTTTCTTTATCGTT+TGG + chr4_4:58785601-58785620 Msa0690870:three_prime_UTR 30.0%
! GTTTGTTTCTTTATCGTTTG+GGG + chr4_4:58785603-58785622 Msa0690870:three_prime_UTR 30.0%
AGAGTTACGGTAAAAATATG+CGG - chr4_4:58785689-58785708 None:intergenic 30.0%
GAAAGTAACCTATGTTGTAT+AGG - chr4_4:58785759-58785778 None:intergenic 30.0%
! ATACAACATAGGTTACTTTC+GGG + chr4_4:58785759-58785778 Msa0690870:three_prime_UTR 30.0%
!!! GCTGAGTTTTCTAGTTTATA+TGG + chr4_4:58785806-58785825 Msa0690870:three_prime_UTR 30.0%
! GCTATATATTGGTTGGTATT+TGG + chr4_4:58785835-58785854 Msa0690870:three_prime_UTR 30.0%
AGTAATTTAGCAAGTGTAGT+GGG + chr4_4:58785953-58785972 Msa0690870:intron 30.0%
ACCCTGAATGATTTGATTAT+AGG - chr4_4:58786308-58786327 None:intergenic 30.0%
AAAAAATTACGTAGACCTTG+AGG - chr4_4:58786547-58786566 None:intergenic 30.0%
CGTAGAATATTCAATGTTTG+AGG + chr4_4:58786568-58786587 Msa0690870:intron 30.0%
! ATGTGAAATATGGTGTGTTT+TGG - chr4_4:58786636-58786655 None:intergenic 30.0%
GTATTATGCGATGTGAAATA+TGG - chr4_4:58786646-58786665 None:intergenic 30.0%
TCATCACCCATTTATATCAA+AGG + chr4_4:58786736-58786755 Msa0690870:intron 30.0%
GAGTCAACCTTTGATATAAA+TGG - chr4_4:58786746-58786765 None:intergenic 30.0%
AAAAAGTAGATCTGATAGAG+GGG - chr4_4:58787023-58787042 None:intergenic 30.0%
GAAAAAGTAGATCTGATAGA+GGG - chr4_4:58787024-58787043 None:intergenic 30.0%
ATGAAATTGAAGAAGGGAAA+GGG - chr4_4:58787088-58787107 None:intergenic 30.0%
AATGAAATTGAAGAAGGGAA+AGG - chr4_4:58787089-58787108 None:intergenic 30.0%
GTGTGAAAAATGAAGAATTG+CGG - chr4_4:58787113-58787132 None:intergenic 30.0%
GAAGAATCATCATTCATCAA+TGG - chr4_4:58787887-58787906 None:intergenic 30.0%
! AGTGTTCTAAATATGTATCC+AGG + chr4_4:58788038-58788057 Msa0690870:intron 30.0%
GATTGTGAAATTTGTAGAAG+TGG + chr4_4:58788266-58788285 Msa0690870:intron 30.0%
AATTGATATCTTGCTTCGTA+TGG + chr4_4:58788473-58788492 Msa0690870:intron 30.0%
! TAGACAATATGGATTATGGA+CGG - chr4_4:58788626-58788645 None:intergenic 30.0%
! CAGATAGACAATATGGATTA+TGG - chr4_4:58788630-58788649 None:intergenic 30.0%
AGATAGTCAGATAGACAATA+TGG - chr4_4:58788637-58788656 None:intergenic 30.0%
AAGAAATAAACTGGGAAAAC+AGG - chr4_4:58788680-58788699 None:intergenic 30.0%
TGAATGGCAAACACAATTAA+AGG - chr4_4:58788804-58788823 None:intergenic 30.0%
!!! TTGTAGACTTACTTTTTGTG+GGG + chr4_4:58788850-58788869 Msa0690870:intron 30.0%
!! GGCAATGGATATTATTTCTA+AGG + chr4_4:58788948-58788967 Msa0690870:intron 30.0%
GAATGATATTGAAGAGCTAA+AGG + chr4_4:58789014-58789033 Msa0690870:intron 30.0%
AAGTTATAACTCAAGACTGT+GGG - chr4_4:58789044-58789063 None:intergenic 30.0%
AAAGTTATAACTCAAGACTG+TGG - chr4_4:58789045-58789064 None:intergenic 30.0%
CTAATCCTAAAATTCACTGA+AGG + chr4_4:58789109-58789128 Msa0690870:intron 30.0%
TATTGTTGCATCAAGTTTGT+AGG + chr4_4:58789354-58789373 Msa0690870:intron 30.0%
! TTTACCTTTTATTCTGGTAC+AGG + chr4_4:58789446-58789465 Msa0690870:intron 30.0%
TTTACCTGTACCAGAATAAA+AGG - chr4_4:58789453-58789472 None:intergenic 30.0%
! AAATGTTGCCAATTTTTCCT+TGG + chr4_4:58789661-58789680 Msa0690870:intron 30.0%
TTGAAGATCCAAGGAAAAAT+TGG - chr4_4:58789672-58789691 None:intergenic 30.0%
ATCATACAATTGAAGATCCA+AGG - chr4_4:58789681-58789700 None:intergenic 30.0%
ATACAAATGCTTACAAAAGC+GGG - chr4_4:58789824-58789843 None:intergenic 30.0%
TCAAGTTAAAAACTTTCCTG+TGG - chr4_4:58790000-58790019 None:intergenic 30.0%
GGGATATGAGATTAATCAAA+TGG - chr4_4:58790085-58790104 None:intergenic 30.0%
TTTGATTAATCTCATATCCC+TGG + chr4_4:58790085-58790104 Msa0690870:intron 30.0%
!!! TCTACAGTTTTAAAAAGCCA+GGG - chr4_4:58790105-58790124 None:intergenic 30.0%
! GAAAGAATTTTCATGTAGAG+AGG + chr4_4:58790354-58790373 Msa0690870:intron 30.0%
GAGTAAACATAAATAGGAAG+TGG - chr4_4:58790436-58790455 None:intergenic 30.0%
TGTACAGACATGCTTAATTA+GGG - chr4_4:58790734-58790753 None:intergenic 30.0%
ATGTACAGACATGCTTAATT+AGG - chr4_4:58790735-58790754 None:intergenic 30.0%
! AAATGACTTGTCTGTATTGA+TGG - chr4_4:58790803-58790822 None:intergenic 30.0%
ATCAATACAGACAAGTCATT+TGG + chr4_4:58790802-58790821 Msa0690870:three_prime_UTR 30.0%
CTAAACAATAAAGAGGCAAA+CGG - chr4_4:58790848-58790867 None:intergenic 30.0%
GTCTAACCTAAACAATAAAG+AGG - chr4_4:58790855-58790874 None:intergenic 30.0%
!! TTTTTCCTCCACATTTTTTG+TGG + chr4_4:58790914-58790933 Msa0690870:three_prime_UTR 30.0%
ACAAATTACACTGTAAATCG+GGG - chr4_4:58791018-58791037 None:intergenic 30.0%
ACTTATGTGGATATTAGTTG+TGG + chr4_4:58791049-58791068 Msa0690870:three_prime_UTR 30.0%
TGGATATTAGTTGTGGTATT+TGG + chr4_4:58791056-58791075 Msa0690870:three_prime_UTR 30.0%
TGATACAAAACAAGATGCAT+TGG - chr4_4:58791083-58791102 None:intergenic 30.0%
GCTAAATTGATCGAAAACGA+AGG - chr4_4:58781542-58781561 None:intergenic 35.0%
! AATCTAGAAAGTGCAGAGAT+TGG - chr4_4:58781820-58781839 None:intergenic 35.0%
ATTGGAAGTAATGTATAGCC+AGG - chr4_4:58782034-58782053 None:intergenic 35.0%
TGGCTATACATTACTTCCAA+TGG + chr4_4:58782033-58782052 Msa0690870:intron 35.0%
GTATCAGACACTACCTATAA+CGG - chr4_4:58782088-58782107 None:intergenic 35.0%
GTTATAGGTAGTGTCTGATA+CGG + chr4_4:58782087-58782106 Msa0690870:intron 35.0%
TTTCATGACTTTGGCTGTTA+CGG - chr4_4:58782421-58782440 None:intergenic 35.0%
CGCTAAGAATTTCATGACTT+TGG - chr4_4:58782430-58782449 None:intergenic 35.0%
GTACTGCATAAACATTGAGT+GGG - chr4_4:58782564-58782583 None:intergenic 35.0%
AGAGTTTATGCATAAGCTCT+TGG + chr4_4:58782902-58782921 Msa0690870:intron 35.0%
TGTGAGAAGGTAGAAAGTAA+AGG + chr4_4:58783144-58783163 Msa0690870:CDS 35.0%
AGGAAGAACAACTTACAATG+AGG + chr4_4:58783164-58783183 Msa0690870:CDS 35.0%
GAACAACTTACAATGAGGTT+AGG + chr4_4:58783169-58783188 Msa0690870:intron 35.0%
CGCTATAGCATTTATTGAGT+TGG - chr4_4:58783266-58783285 None:intergenic 35.0%
!!! ATTAAGCACGGTGGTTTTTT+TGG + chr4_4:58783447-58783466 Msa0690870:intron 35.0%
!!! TTAAGCACGGTGGTTTTTTT+GGG + chr4_4:58783448-58783467 Msa0690870:intron 35.0%
! TCTGAGGCTAATAATTACCA+CGG - chr4_4:58783484-58783503 None:intergenic 35.0%
AATCACAACATGAAATGGGT+AGG - chr4_4:58783535-58783554 None:intergenic 35.0%
AGATAAGAAAACCTGATCAG+GGG - chr4_4:58783699-58783718 None:intergenic 35.0%
GAAGATAAGAAAACCTGATC+AGG - chr4_4:58783701-58783720 None:intergenic 35.0%
! TGATGCTCTGAATGTTCTTA+TGG + chr4_4:58783851-58783870 Msa0690870:CDS 35.0%
TTCTTCAATATCACTCAGAC+TGG - chr4_4:58783934-58783953 None:intergenic 35.0%
TTAGATCAGAACATCACTGA+AGG - chr4_4:58784013-58784032 None:intergenic 35.0%
ATTAAATAGACACAGCGTCT+TGG + chr4_4:58784051-58784070 Msa0690870:intron 35.0%
TTAAATAGACACAGCGTCTT+GGG + chr4_4:58784052-58784071 Msa0690870:intron 35.0%
TTAAATCAATTAGAGTGGGC+TGG - chr4_4:58784138-58784157 None:intergenic 35.0%
!!! TCTCAGTATCTGCCTTTTTT+TGG + chr4_4:58784395-58784414 Msa0690870:intron 35.0%
ATGAACTTAAGTAGTTGGCT+TGG + chr4_4:58784505-58784524 Msa0690870:intron 35.0%
GAAAATAGATCTTATCCAGC+TGG + chr4_4:58784568-58784587 Msa0690870:intron 35.0%
TAGTTAATTCACTAACCAGC+TGG - chr4_4:58784586-58784605 None:intergenic 35.0%
CAAACGAATGCCCAAAAAAA+GGG - chr4_4:58784620-58784639 None:intergenic 35.0%
! TTGTTTAGTTCAGCTTACTC+TGG + chr4_4:58784695-58784714 Msa0690870:intron 35.0%
! TACTCTGGTTGCCTATTTTA+TGG + chr4_4:58784710-58784729 Msa0690870:intron 35.0%
! ACTCTGGTTGCCTATTTTAT+GGG + chr4_4:58784711-58784730 Msa0690870:intron 35.0%
GAATAATATGCTCATCCTGT+TGG + chr4_4:58784802-58784821 Msa0690870:intron 35.0%
AACTCAGATAATGACAAGCA+AGG - chr4_4:58784978-58784997 None:intergenic 35.0%
! ATACACTAGTTTCCACTTTC+CGG - chr4_4:58785073-58785092 None:intergenic 35.0%
GAAACTAGTGTATCCTATTG+TGG + chr4_4:58785080-58785099 Msa0690870:intron 35.0%
! GCAGATAAATTTTCCAACAC+AGG - chr4_4:58785184-58785203 None:intergenic 35.0%
TGACGACAATTATGTTCTCA+AGG + chr4_4:58785250-58785269 Msa0690870:CDS 35.0%
CAATTATGTTCTCAAGGCAA+TGG + chr4_4:58785256-58785275 Msa0690870:CDS 35.0%
CTCTTGCCTTTAATATTCCA+GGG - chr4_4:58785433-58785452 None:intergenic 35.0%
ACTCTTGCCTTTAATATTCC+AGG - chr4_4:58785434-58785453 None:intergenic 35.0%
TGATTCTCTCTTACTACATG+GGG - chr4_4:58785718-58785737 None:intergenic 35.0%
CTGATTCTCTCTTACTACAT+GGG - chr4_4:58785719-58785738 None:intergenic 35.0%
! ACTGATTCTCTCTTACTACA+TGG - chr4_4:58785720-58785739 None:intergenic 35.0%
ATCGGTAACCTATACAACAT+AGG + chr4_4:58785748-58785767 Msa0690870:three_prime_UTR 35.0%
TTCGGGATTCACTAATTTAC+AGG + chr4_4:58785776-58785795 Msa0690870:three_prime_UTR 35.0%
TCGGGATTCACTAATTTACA+GGG + chr4_4:58785777-58785796 Msa0690870:three_prime_UTR 35.0%
CTAATATGGACAGTACGAAA+CGG - chr4_4:58785917-58785936 None:intergenic 35.0%
CAGTAATTTAGCAAGTGTAG+TGG + chr4_4:58785952-58785971 Msa0690870:intron 35.0%
! AAGTGTAGTGGGAAATTGAT+TGG + chr4_4:58785964-58785983 Msa0690870:intron 35.0%
TCGGCTAACTCGATAAAAAT+TGG + chr4_4:58786205-58786224 Msa0690870:intron 35.0%
ATGGAACATTGTACTGTTTC+GGG - chr4_4:58786339-58786358 None:intergenic 35.0%
CATGGAACATTGTACTGTTT+CGG - chr4_4:58786340-58786359 None:intergenic 35.0%
AGTTCAACTTCTGACTGTTA+CGG + chr4_4:58786804-58786823 Msa0690870:intron 35.0%
ATACACTTTAAACCTTGCGT+AGG + chr4_4:58786923-58786942 Msa0690870:intron 35.0%
TACACTTTAAACCTTGCGTA+GGG + chr4_4:58786924-58786943 Msa0690870:intron 35.0%
TACTAGGGATTGGAGAATTT+AGG + chr4_4:58786948-58786967 Msa0690870:intron 35.0%
AAAAGTAGATCTGATAGAGG+GGG - chr4_4:58787022-58787041 None:intergenic 35.0%
GGAAAAAGTAGATCTGATAG+AGG - chr4_4:58787025-58787044 None:intergenic 35.0%
GCGGAAATGAAATTGAAGAA+GGG - chr4_4:58787094-58787113 None:intergenic 35.0%
TGCGGAAATGAAATTGAAGA+AGG - chr4_4:58787095-58787114 None:intergenic 35.0%
!! GAGGAAGAATTTGAGTTGTA+GGG - chr4_4:58787135-58787154 None:intergenic 35.0%
!! TGAGGAAGAATTTGAGTTGT+AGG - chr4_4:58787136-58787155 None:intergenic 35.0%
!! CGATTTCTGAAGTGAAATGA+TGG - chr4_4:58787164-58787183 None:intergenic 35.0%
GCAAAACCTTAATTGAGAGA+GGG - chr4_4:58787207-58787226 None:intergenic 35.0%
AGCAAAACCTTAATTGAGAG+AGG - chr4_4:58787208-58787227 None:intergenic 35.0%
CATGTCATGCAAATTGCTTA+TGG + chr4_4:58787473-58787492 Msa0690870:intron 35.0%
CTTGTGATGCAAATTGCTTA+TGG + chr4_4:58787535-58787554 Msa0690870:intron 35.0%
AGTAGCAAGAAGAAAAAGAG+AGG + chr4_4:58787575-58787594 Msa0690870:intron 35.0%
AAATACTTCAAGGATACTCC+TGG - chr4_4:58788059-58788078 None:intergenic 35.0%
TAATACTTCACGAATACTCG+TGG - chr4_4:58788150-58788169 None:intergenic 35.0%
CATCCGTATCAGATACATAT+TGG - chr4_4:58788177-58788196 None:intergenic 35.0%
! CATGCTGACAATTTTCTTTC+TGG + chr4_4:58788335-58788354 Msa0690870:intron 35.0%
TGTGAGAAGGTAGAAAGTAA+AGG + chr4_4:58783144-58783163 Msa0690870:CDS 35.0%
AGGAAGAACAACTTACAATG+AGG + chr4_4:58783164-58783183 Msa0690870:CDS 35.0%
!!! TAGCTTTTTTTTGGGCATGA+AGG + chr4_4:58788540-58788559 Msa0690870:intron 35.0%
ATTATTGGGTCAAGAACTTG+TGG + chr4_4:58788577-58788596 Msa0690870:intron 35.0%
GATTATGGACGGATGATAAA+AGG - chr4_4:58788615-58788634 None:intergenic 35.0%
AAGGAGAGAAAACCTTATCA+GGG - chr4_4:58788785-58788804 None:intergenic 35.0%
AAAGGAGAGAAAACCTTATC+AGG - chr4_4:58788786-58788805 None:intergenic 35.0%
ATGAGAAAAACATTCGTCGA+AGG + chr4_4:58788899-58788918 Msa0690870:intron 35.0%
TGAGAAAAACATTCGTCGAA+GGG + chr4_4:58788900-58788919 Msa0690870:intron 35.0%
ATATCATTCAGACTAGTACG+AGG - chr4_4:58789003-58789022 None:intergenic 35.0%
CAGGTAAAGCATAAGATACA+TGG - chr4_4:58789074-58789093 None:intergenic 35.0%
TTAGCTCAGAATATCATTGC+AGG - chr4_4:58789093-58789112 None:intergenic 35.0%
! ATGGACCTTCAGTGAATTTT+AGG - chr4_4:58789117-58789136 None:intergenic 35.0%
TGCAATTTCAAATGCAGCAA+AGG - chr4_4:58789279-58789298 None:intergenic 35.0%
AATAGAGGAAGTTGAGATGA+TGG - chr4_4:58789476-58789495 None:intergenic 35.0%
!!! TGTTTTGTTTCGTTTCCCAT+AGG + chr4_4:58789500-58789519 Msa0690870:intron 35.0%
ATCATGTTTGACACTGAATG+TGG + chr4_4:58789541-58789560 Msa0690870:intron 35.0%
TCATGTTTGACACTGAATGT+GGG + chr4_4:58789542-58789561 Msa0690870:intron 35.0%
! AAATTGGCAACATTTGCTAC+TGG - chr4_4:58789656-58789675 None:intergenic 35.0%
!! ACTTTATTCTGGTTGCCTTT+TGG + chr4_4:58789926-58789945 Msa0690870:intron 35.0%
TGAGCAGATATAAAGCCAAA+AGG - chr4_4:58789944-58789963 None:intergenic 35.0%
ATATCTGCTCAATGCTATGT+CGG + chr4_4:58789953-58789972 Msa0690870:intron 35.0%
!!! GTCTACAGTTTTAAAAAGCC+AGG - chr4_4:58790106-58790125 None:intergenic 35.0%
GGTAAAACTTCACTTTCCTT+TGG + chr4_4:58790194-58790213 Msa0690870:intron 35.0%
TAACTTAGAAAGAACGCCAA+AGG - chr4_4:58790213-58790232 None:intergenic 35.0%
TTGGCGTTCTTTCTAAGTTA+TGG + chr4_4:58790213-58790232 Msa0690870:intron 35.0%
AAGTTATGGCGTGATTATCT+AGG + chr4_4:58790227-58790246 Msa0690870:intron 35.0%
! ATTTTCATGTAGAGAGGTTC+TGG + chr4_4:58790360-58790379 Msa0690870:intron 35.0%
! TTTTCATGTAGAGAGGTTCT+GGG + chr4_4:58790361-58790380 Msa0690870:intron 35.0%
TGACGACAATTATGTGCTTA+AGG + chr4_4:58790492-58790511 Msa0690870:intron 35.0%
CAATTATGTGCTTAAGGCAA+TGG + chr4_4:58790498-58790517 Msa0690870:intron 35.0%
GTTACACACAATGTTACAGA+TGG + chr4_4:58790550-58790569 Msa0690870:intron 35.0%
CTCTTGCCTTTAATATTCCA+GGG - chr4_4:58785433-58785452 None:intergenic 35.0%
ACTCTTGCCTTTAATATTCC+AGG - chr4_4:58785434-58785453 None:intergenic 35.0%
! TTGATGGCTAACAATCACAA+AGG - chr4_4:58790787-58790806 None:intergenic 35.0%
ATACAGACAAGTCATTTGGT+AGG + chr4_4:58790806-58790825 Msa0690870:three_prime_UTR 35.0%
CGTTTGCCTCTTTATTGTTT+AGG + chr4_4:58790846-58790865 Msa0690870:three_prime_UTR 35.0%
AGTTACCACAAAAAATGTGG+AGG - chr4_4:58790922-58790941 None:intergenic 35.0%
GATTTAGGAGTTATGCAGGT+AGG + chr4_4:58781291-58781310 Msa0690870:five_prime_UTR 40.0%
!! AGGTTGTGATGGATTAACAG+CGG - chr4_4:58781418-58781437 None:intergenic 40.0%
AGCTTCAAAATCCTCACTAC+AGG + chr4_4:58781559-58781578 Msa0690870:five_prime_UTR 40.0%
TCAAAATCCTCACTACAGGA+TGG + chr4_4:58781563-58781582 Msa0690870:exon 40.0%
CAAAATCCTCACTACAGGAT+GGG + chr4_4:58781564-58781583 Msa0690870:exon 40.0%
!! TTTAGCTTGGGATGAGATTC+TGG + chr4_4:58781902-58781921 Msa0690870:intron 40.0%
TGATATACTGGACTTGAACC+TGG + chr4_4:58782013-58782032 Msa0690870:intron 40.0%
GTGAACAAACGTTATGGAAG+CGG + chr4_4:58782120-58782139 Msa0690870:intron 40.0%
GGTACTGCATAAACATTGAG+TGG - chr4_4:58782565-58782584 None:intergenic 40.0%
GTACCAAGAAGAAAAAGCGA+CGG + chr4_4:58782580-58782599 Msa0690870:intron 40.0%
TACCAAGAAGAAAAAGCGAC+GGG + chr4_4:58782581-58782600 Msa0690870:CDS 40.0%
CTCCGGCAATTTAGTATGAA+AGG + chr4_4:58782633-58782652 Msa0690870:CDS 40.0%
AGGATAAGTGCAACTTTGCA+AGG - chr4_4:58782720-58782739 None:intergenic 40.0%
TGCTTCGATAAGCTATTGTG+AGG - chr4_4:58782834-58782853 None:intergenic 40.0%
TCAGCATTCAGCATACTAAG+GGG - chr4_4:58782980-58782999 None:intergenic 40.0%
CTCAGCATTCAGCATACTAA+GGG - chr4_4:58782981-58783000 None:intergenic 40.0%
ACTCAGCATTCAGCATACTA+AGG - chr4_4:58782982-58783001 None:intergenic 40.0%
AATTGTGAAACTTGCAGCAG+TGG + chr4_4:58783013-58783032 Msa0690870:intron 40.0%
! ATTTTCTGCAGTGTGTGAGA+AGG + chr4_4:58783131-58783150 Msa0690870:intron 40.0%
! AAAAGCACAGTTCTCGATCA+TGG + chr4_4:58783223-58783242 Msa0690870:intron 40.0%
TTGTCAATGATTAAGCACGG+TGG + chr4_4:58783438-58783457 Msa0690870:intron 40.0%
! GAATTTTCTGACCCAAGCAA+TGG + chr4_4:58783665-58783684 Msa0690870:CDS 40.0%
ATGAGAAAAACATCCGTCGA+AGG + chr4_4:58783823-58783842 Msa0690870:CDS 40.0%
TGAGAAAAACATCCGTCGAA+GGG + chr4_4:58783824-58783843 Msa0690870:CDS 40.0%
GGCTTAGGAGTAGAATTGAA+AGG + chr4_4:58784073-58784092 Msa0690870:CDS 40.0%
TTAATACCGGAATGCTAACC+TGG + chr4_4:58784154-58784173 Msa0690870:intron 40.0%
AAAGGCAGATACTGAGATGA+TGG - chr4_4:58784392-58784411 None:intergenic 40.0%
CCAAACGAATGCCCAAAAAA+AGG - chr4_4:58784621-58784640 None:intergenic 40.0%
!!! CCTTTTTTTGGGCATTCGTT+TGG + chr4_4:58784618-58784637 Msa0690870:intron 40.0%
!! ACTTTCTAAGATCCATGACC+AGG - chr4_4:58784765-58784784 None:intergenic 40.0%
GTATCATAAAGTCCGGAAAG+TGG + chr4_4:58785058-58785077 Msa0690870:intron 40.0%
TCCTATTGTGGTCAAACACT+CGG + chr4_4:58785092-58785111 Msa0690870:intron 40.0%
ATAAGTCTTGGGAGCTAGTT+AGG + chr4_4:58785139-58785158 Msa0690870:intron 40.0%
TAAGTCTTGGGAGCTAGTTA+GGG + chr4_4:58785140-58785159 Msa0690870:intron 40.0%
!! GTTCTCAAGGCAATGGATTT+TGG + chr4_4:58785263-58785282 Msa0690870:CDS 40.0%
!! TCAAGGCAATGGATTTTGGT+GGG + chr4_4:58785267-58785286 Msa0690870:CDS 40.0%
TGTGTAACATTGTCACTCTG+TGG - chr4_4:58785302-58785321 None:intergenic 40.0%
GTTACACACAATATTGCGGA+TGG + chr4_4:58785314-58785333 Msa0690870:CDS 40.0%
TTTAATATTCCAGGGAGTGG+AGG - chr4_4:58785425-58785444 None:intergenic 40.0%
TCCACTCCCTGGAATATTAA+AGG + chr4_4:58785424-58785443 Msa0690870:CDS 40.0%
GTTAGTCATCAGTACAGCTT+TGG + chr4_4:58785558-58785577 Msa0690870:three_prime_UTR 40.0%
ATTCTCTCTTACTACATGGG+GGG - chr4_4:58785716-58785735 None:intergenic 40.0%
GATTCTCTCTTACTACATGG+GGG - chr4_4:58785717-58785736 None:intergenic 40.0%
ATACCAACAACACAAGCAAC+AGG - chr4_4:58785880-58785899 None:intergenic 40.0%
! GGTTTAGTTCGCAAACATCT+TGG + chr4_4:58786226-58786245 Msa0690870:intron 40.0%
!! TTGTACTGTTTCGGGTTTGT+GGG - chr4_4:58786331-58786350 None:intergenic 40.0%
!! ATTGTACTGTTTCGGGTTTG+TGG - chr4_4:58786332-58786351 None:intergenic 40.0%
TCTATATTACGTACGCCTCA+AGG + chr4_4:58786529-58786548 Msa0690870:intron 40.0%
!!! ATGGTGTGTTTTGGTTGTCA+TGG - chr4_4:58786627-58786646 None:intergenic 40.0%
GTTCAACTTCTGACTGTTAC+GGG + chr4_4:58786805-58786824 Msa0690870:intron 40.0%
! TTGTTTGTTGAGTAGCAGCA+CGG - chr4_4:58786991-58787010 None:intergenic 40.0%
!!! AGATCTACTTTTTCCCTCAC+CGG + chr4_4:58787030-58787049 Msa0690870:intron 40.0%
AAATTGAAGAAGGGAAAGGG+CGG - chr4_4:58787085-58787104 None:intergenic 40.0%
CGAAGAGGAAACTACGATTT+CGG + chr4_4:58787268-58787287 Msa0690870:intron 40.0%
GAAGAGGAAACTACGATTTC+GGG + chr4_4:58787269-58787288 Msa0690870:intron 40.0%
AACTTACGCAACTACTCCTT+GGG - chr4_4:58787432-58787451 None:intergenic 40.0%
AAACTTACGCAACTACTCCT+TGG - chr4_4:58787433-58787452 None:intergenic 40.0%
!! TCTTCCACTTTTATCACCTC+CGG - chr4_4:58787615-58787634 None:intergenic 40.0%
GAGGTGATAAAAGTGGAAGA+GGG + chr4_4:58787615-58787634 Msa0690870:intron 40.0%
CTTCGCCAATTTAGCATGAA+AGG + chr4_4:58787638-58787657 Msa0690870:intron 40.0%
!! TCCAGGTTTCATAGTTTGCT+AGG - chr4_4:58787717-58787736 None:intergenic 40.0%
!! TGGATACCTAGTACTGATGT+GGG + chr4_4:58787733-58787752 Msa0690870:intron 40.0%
GGGTACATGTGAGAAATTAG+TGG - chr4_4:58788012-58788031 None:intergenic 40.0%
TGATACGGATGTCTCCAATT+TGG + chr4_4:58788186-58788205 Msa0690870:intron 40.0%
GTCTCCAATTTGGATTATCC+AGG + chr4_4:58788196-58788215 Msa0690870:intron 40.0%
GAAGCCTGGATAATCCAAAT+TGG - chr4_4:58788203-58788222 None:intergenic 40.0%
GTTCTTTGTAGTGTGTGAGA+AGG + chr4_4:58788380-58788399 Msa0690870:intron 40.0%
CAACTTACAATGAGGTTAGC+TGG + chr4_4:58788421-58788440 Msa0690870:intron 40.0%
AGGAGAGAAAACCTTATCAG+GGG - chr4_4:58788784-58788803 None:intergenic 40.0%
!!! GACTTACTTTTTGTGGGGAT+TGG + chr4_4:58788855-58788874 Msa0690870:intron 40.0%
! TGATGCTCTGAATGTTCTCA+TGG + chr4_4:58788927-58788946 Msa0690870:intron 40.0%
TCTGAATGTTCTCATGGCAA+TGG + chr4_4:58788933-58788952 Msa0690870:intron 40.0%
! ATTTAACAGACAGAGCGTCT+TGG + chr4_4:58789154-58789173 Msa0690870:intron 40.0%
! TTTAACAGACAGAGCGTCTT+GGG + chr4_4:58789155-58789174 Msa0690870:intron 40.0%
GGCTCAGGAATAGAATTGAA+AGG + chr4_4:58789176-58789195 Msa0690870:intron 40.0%
AAGGAAATCATCCTATCTGC+AGG + chr4_4:58789195-58789214 Msa0690870:intron 40.0%
ACATGATTACCTCCAGTGAA+GGG - chr4_4:58789528-58789547 None:intergenic 40.0%
AACATGATTACCTCCAGTGA+AGG - chr4_4:58789529-58789548 None:intergenic 40.0%
ATCAAAAGAGACACCAACTG+AGG - chr4_4:58789625-58789644 None:intergenic 40.0%
GTACATGTTGTGCAGTGAAT+TGG - chr4_4:58789709-58789728 None:intergenic 40.0%
!! AGCGGGAAAAAGGTATTTCT+AGG - chr4_4:58789807-58789826 None:intergenic 40.0%
TGCTTACAAAAGCGGGAAAA+AGG - chr4_4:58789817-58789836 None:intergenic 40.0%
TGGTCGAGTTCACTTTATTC+TGG + chr4_4:58789915-58789934 Msa0690870:intron 40.0%
TATCTGCTCAATGCTATGTC+GGG + chr4_4:58789954-58789973 Msa0690870:intron 40.0%
GGGTCTATACGTTGAATTCT+TGG + chr4_4:58789974-58789993 Msa0690870:intron 40.0%
CGTGATTATCTAGGTCTGAA+TGG + chr4_4:58790236-58790255 Msa0690870:intron 40.0%
GGAACTAGTGTCTCCTATTA+TGG + chr4_4:58790315-58790334 Msa0690870:intron 40.0%
TTCTTTCCGTTGCCTCTATT+CGG - chr4_4:58790341-58790360 None:intergenic 40.0%
TTGTCGTCATGCAACTCAAA+AGG - chr4_4:58790481-58790500 None:intergenic 40.0%
GTGCTTAAGGCAATGGAATT+TGG + chr4_4:58790505-58790524 Msa0690870:intron 40.0%
ACACACAATGTTACAGATGG+AGG + chr4_4:58790553-58790572 Msa0690870:intron 40.0%
CACACAATGTTACAGATGGA+GGG + chr4_4:58790554-58790573 Msa0690870:intron 40.0%
ACACAATGTTACAGATGGAG+GGG + chr4_4:58790555-58790574 Msa0690870:intron 40.0%
TTTAATATTCCAGGGAGTGG+AGG - chr4_4:58785425-58785444 None:intergenic 40.0%
TCCACTCCCTGGAATATTAA+AGG + chr4_4:58785424-58785443 Msa0690870:CDS 40.0%
CCATGGTAGTAATTGATGGA+TGG - chr4_4:58790888-58790907 None:intergenic 40.0%
CCATCCATCAATTACTACCA+TGG + chr4_4:58790885-58790904 Msa0690870:three_prime_UTR 40.0%
TCTGCCATGGTAGTAATTGA+TGG - chr4_4:58790892-58790911 None:intergenic 40.0%
TGGAGGAAAAAAATCTGCCA+TGG - chr4_4:58790905-58790924 None:intergenic 40.0%
TGATCTCTCTAGCTACAATG+CGG - chr4_4:58790949-58790968 None:intergenic 40.0%
AGAGATCAGAGATCATGGAA+TGG + chr4_4:58790961-58790980 Msa0690870:three_prime_UTR 40.0%
TAGGAGTTATGCAGGTAGGA+TGG + chr4_4:58781295-58781314 Msa0690870:five_prime_UTR 45.0%
AGGAGTTATGCAGGTAGGAT+GGG + chr4_4:58781296-58781315 Msa0690870:five_prime_UTR 45.0%
GAGGGAAAGAGGAGATCTTA+GGG - chr4_4:58781383-58781402 None:intergenic 45.0%
GATTAACAGCGGCGGTTATT+CGG - chr4_4:58781407-58781426 None:intergenic 45.0%
!! TTGTGATGGATTAACAGCGG+CGG - chr4_4:58781415-58781434 None:intergenic 45.0%
TAGGGCACGCAATATGAAGA+AGG - chr4_4:58781508-58781527 None:intergenic 45.0%
TTCTTCATATTGCGTGCCCT+AGG + chr4_4:58781507-58781526 Msa0690870:five_prime_UTR 45.0%
TCTTCATATTGCGTGCCCTA+GGG + chr4_4:58781508-58781527 Msa0690870:five_prime_UTR 45.0%
ACGAAGGGAGAAAAACCCTA+GGG - chr4_4:58781526-58781545 None:intergenic 45.0%
AACGAAGGGAGAAAAACCCT+AGG - chr4_4:58781527-58781546 None:intergenic 45.0%
GAAGAGGACGAGGAATTGAT+GGG + chr4_4:58781615-58781634 Msa0690870:CDS 45.0%
TTTGAGAGCAGCGTTATCAC+CGG - chr4_4:58781733-58781752 None:intergenic 45.0%
! GTTATGGATTGTGGTCGTTG+CGG - chr4_4:58782391-58782410 None:intergenic 45.0%
! GGATGTTGCGTTATGGATTG+TGG - chr4_4:58782400-58782419 None:intergenic 45.0%
CTGTTACGGATGTTGCGTTA+TGG - chr4_4:58782407-58782426 None:intergenic 45.0%
GGGGTGATAAGAATGGAAGA+GGG + chr4_4:58782610-58782629 Msa0690870:CDS 45.0%
ATAAGAATGGAAGAGGGCTC+CGG + chr4_4:58782616-58782635 Msa0690870:CDS 45.0%
! CGAGAACTGTGCTTTTAACG+TGG - chr4_4:58783219-58783238 None:intergenic 45.0%
!!! TTTTGGGATCAAGTTGTCCG+TGG + chr4_4:58783464-58783483 Msa0690870:intron 45.0%
TTAGCCTCAGAAACTGGTAG+TGG + chr4_4:58783493-58783512 Msa0690870:intron 45.0%
AAGTCCACTACCAGTTTCTG+AGG - chr4_4:58783500-58783519 None:intergenic 45.0%
ACAACATGAAATGGGTAGGC+AGG - chr4_4:58783531-58783550 None:intergenic 45.0%
ATAGGTGGCAGATGAACTTG+TGG + chr4_4:58783640-58783659 Msa0690870:intron 45.0%
! TTTTCTGACCCAAGCAATGG+TGG + chr4_4:58783668-58783687 Msa0690870:CDS 45.0%
ATATCACTCAGACTGGTACG+AGG - chr4_4:58783927-58783946 None:intergenic 45.0%
! CTGTATCTTTTCTCTCTGCG+TGG + chr4_4:58783976-58783995 Msa0690870:intron 45.0%
AGCAATCCAGGTTAGCATTC+CGG - chr4_4:58784163-58784182 None:intergenic 45.0%
GGTAAAGATACACCTCCACT+GGG - chr4_4:58784348-58784367 None:intergenic 45.0%
AGGTAAAGATACACCTCCAC+TGG - chr4_4:58784349-58784368 None:intergenic 45.0%
GGGTTTATACGGAGAATTCC+TGG + chr4_4:58784744-58784763 Msa0690870:intron 45.0%
ATACGGAGAATTCCTGGTCA+TGG + chr4_4:58784750-58784769 Msa0690870:intron 45.0%
TCCGAGTGTTTGACCACAAT+AGG - chr4_4:58785096-58785115 None:intergenic 45.0%
!! CTCAAGGCAATGGATTTTGG+TGG + chr4_4:58785266-58785285 Msa0690870:CDS 45.0%
!! CAAGGCAATGGATTTTGGTG+GGG + chr4_4:58785268-58785287 Msa0690870:CDS 45.0%
!! AAGGCAATGGATTTTGGTGG+GGG + chr4_4:58785269-58785288 Msa0690870:CDS 45.0%
ACACACAATATTGCGGATGG+AGG + chr4_4:58785317-58785336 Msa0690870:CDS 45.0%
CACACAATATTGCGGATGGA+GGG + chr4_4:58785318-58785337 Msa0690870:CDS 45.0%
ACACAATATTGCGGATGGAG+GGG + chr4_4:58785319-58785338 Msa0690870:CDS 45.0%
GTCAGGCATGTATCAATCAC+AGG + chr4_4:58785355-58785374 Msa0690870:CDS 45.0%
GCCTTTAATATTCCAGGGAG+TGG - chr4_4:58785428-58785447 None:intergenic 45.0%
! GTCATCAGTACAGCTTTGGT+AGG + chr4_4:58785562-58785581 Msa0690870:three_prime_UTR 45.0%
! CTTTATCGTTTGGGGTAGAC+TGG + chr4_4:58785611-58785630 Msa0690870:three_prime_UTR 45.0%
ACAGGACAAGCAAGATGCAT+TGG - chr4_4:58785862-58785881 None:intergenic 45.0%
! TGTCCTGTTGCTTGTGTTGT+TGG + chr4_4:58785874-58785893 Msa0690870:three_prime_UTR 45.0%
ATGGACAGTACGAAACGGAA+GGG - chr4_4:58785912-58785931 None:intergenic 45.0%
TATGGACAGTACGAAACGGA+AGG - chr4_4:58785913-58785932 None:intergenic 45.0%
GAGTCGATCCAAACTTGACT+CGG + chr4_4:58786186-58786205 Msa0690870:intron 45.0%
AAACCTTGCGTAGGGATACT+AGG + chr4_4:58786932-58786951 Msa0690870:intron 45.0%
AACCTTGCGTAGGGATACTA+GGG + chr4_4:58786933-58786952 Msa0690870:intron 45.0%
AATTGAAGAAGGGAAAGGGC+GGG - chr4_4:58787084-58787103 None:intergenic 45.0%
!! AGTGAAATGATGGAGTGCTG+AGG - chr4_4:58787154-58787173 None:intergenic 45.0%
TTGCAGCCCTCTCTCAATTA+AGG + chr4_4:58787198-58787217 Msa0690870:intron 45.0%
! AAGGTTTTGCTGCCAAACGA+TGG + chr4_4:58787217-58787236 Msa0690870:intron 45.0%
! AGGTTTTGCTGCCAAACGAT+GGG + chr4_4:58787218-58787237 Msa0690870:intron 45.0%
ACTACGATTTCGGGACAATC+AGG + chr4_4:58787278-58787297 Msa0690870:intron 45.0%
TCTGAGAGCAGTGTTATCAC+CGG - chr4_4:58787372-58787391 None:intergenic 45.0%
GGAGGTGATAAAAGTGGAAG+AGG + chr4_4:58787614-58787633 Msa0690870:intron 45.0%
GCCTAGCAAACTATGAAACC+TGG + chr4_4:58787713-58787732 Msa0690870:intron 45.0%
CACATCAGTACTAGGTATCC+AGG - chr4_4:58787734-58787753 None:intergenic 45.0%
!! CTGGATACCTAGTACTGATG+TGG + chr4_4:58787732-58787751 Msa0690870:intron 45.0%
CAAGACAGTACAGTGCAGTA+TGG - chr4_4:58787803-58787822 None:intergenic 45.0%
CGTTGCTAGCAAAGCATGTT+TGG + chr4_4:58788222-58788241 Msa0690870:intron 45.0%
GGGGTCAAAACACTGTTGAT+TGG - chr4_4:58788765-58788784 None:intergenic 45.0%
!!! CAGTGTTTTGACCCCTGATA+AGG + chr4_4:58788770-58788789 Msa0690870:intron 45.0%
GGTAAAGATACACCTCCACT+GGG - chr4_4:58784348-58784367 None:intergenic 45.0%
AGGTAAAGATACACCTCCAC+TGG - chr4_4:58784349-58784368 None:intergenic 45.0%
AAGAGACACCAACTGAGGTT+GGG - chr4_4:58789620-58789639 None:intergenic 45.0%
AAAGAGACACCAACTGAGGT+TGG - chr4_4:58789621-58789640 None:intergenic 45.0%
TACGTTGAATTCTTGGCCAC+AGG + chr4_4:58789981-58790000 Msa0690870:intron 45.0%
! GAAGAATTTGCTTGTCCTGC+TGG + chr4_4:58790030-58790049 Msa0690870:intron 45.0%
GGATGTGATATGGCTCTTAG+TGG + chr4_4:58790054-58790073 Msa0690870:intron 45.0%
TCCTCATGCAACTGTTGAAG+TGG + chr4_4:58790129-58790148 Msa0690870:intron 45.0%
TCCACTTCAACAGTTGCATG+AGG - chr4_4:58790133-58790152 None:intergenic 45.0%
CTCCTATTATGGCCGAATAG+AGG + chr4_4:58790326-58790345 Msa0690870:intron 45.0%
TGCCTCTATTCGGCCATAAT+AGG - chr4_4:58790331-58790350 None:intergenic 45.0%
TTATGGCCGAATAGAGGCAA+CGG + chr4_4:58790332-58790351 Msa0690870:intron 45.0%
AATGTTACAGATGGAGGGGA+AGG + chr4_4:58790559-58790578 Msa0690870:intron 45.0%
GCCTTTAATATTCCAGGGAG+TGG - chr4_4:58785428-58785447 None:intergenic 45.0%
GATCTCTCTAGCTACAATGC+GGG - chr4_4:58790948-58790967 None:intergenic 45.0%
GCTAGAGAGATCAGAGATCA+TGG + chr4_4:58790956-58790975 Msa0690870:three_prime_UTR 45.0%
GGAATGGAGTCCAACAACAT+AGG + chr4_4:58790977-58790996 Msa0690870:three_prime_UTR 45.0%
CATTTGATAGGGTCCTTGTG+AGG + chr4_4:58791101-58791120 Msa0690870:three_prime_UTR 45.0%
!!! TTTAATCAAATTTATATTTT+TGG - chr4_4:58784037-58784056 None:intergenic 5.0%
!! AAAATTAAAACTAAAAAATA+GGG + chr4_4:58786150-58786169 Msa0690870:intron 5.0%
! GGGGGCACGAAATACGAATA+CGG - chr4_4:58781355-58781374 None:intergenic 50.0%
AGAGGAGATCTTAGGGAACG+CGG - chr4_4:58781376-58781395 None:intergenic 50.0%
CGAGGGAAAGAGGAGATCTT+AGG - chr4_4:58781384-58781403 None:intergenic 50.0%
AGAGAGAGGTGAGGTTGTGA+TGG - chr4_4:58781429-58781448 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr4_4:58781441-58781460 None:intergenic 50.0%
CGAAGAGGACGAGGAATTGA+TGG + chr4_4:58781614-58781633 Msa0690870:CDS 50.0%
!! GACGAGGAATTGATGGGTTG+TGG + chr4_4:58781621-58781640 Msa0690870:CDS 50.0%
GGTTGTGGAACTACGCTTTC+CGG + chr4_4:58781636-58781655 Msa0690870:CDS 50.0%
AAACGTTATGGAAGCGGCCA+TGG + chr4_4:58782126-58782145 Msa0690870:intron 50.0%
ATGGAAGCGGCCATGGTAAT+TGG + chr4_4:58782133-58782152 Msa0690870:intron 50.0%
!!! AGCCCGTCGCTTTTTCTTCT+TGG - chr4_4:58782586-58782605 None:intergenic 50.0%
!! AAGAAAAAGCGACGGGCTGT+TGG + chr4_4:58782588-58782607 Msa0690870:CDS 50.0%
!! AGAAAAAGCGACGGGCTGTT+GGG + chr4_4:58782589-58782608 Msa0690870:CDS 50.0%
GCTGTTGGGGGTGATAAGAA+TGG + chr4_4:58782603-58782622 Msa0690870:CDS 50.0%
GGGGGTGATAAGAATGGAAG+AGG + chr4_4:58782609-58782628 Msa0690870:CDS 50.0%
GCACAGTTCTCGATCATGGA+TGG + chr4_4:58783227-58783246 Msa0690870:intron 50.0%
CTCGATCATGGATGGCAAAG+CGG + chr4_4:58783235-58783254 Msa0690870:intron 50.0%
GGGACAAACCACCATTGCTT+GGG - chr4_4:58783679-58783698 None:intergenic 50.0%
GAGCATCATAGACCCTTCGA+CGG - chr4_4:58783839-58783858 None:intergenic 50.0%
AAGGAAAGCAGCCTATCTGC+AGG + chr4_4:58784092-58784111 Msa0690870:CDS 50.0%
AAAGATACACCTCCACTGGG+AGG - chr4_4:58784345-58784364 None:intergenic 50.0%
TGCTGTGATGTGGCTCCTAT+TGG + chr4_4:58784826-58784845 Msa0690870:intron 50.0%
TCCTCATGCAACTGTGGAAG+TGG + chr4_4:58784894-58784913 Msa0690870:CDS 50.0%
TCCACTTCCACAGTTGCATG+AGG - chr4_4:58784898-58784917 None:intergenic 50.0%
! TGGTGCTTTTGTCCCTGTGT+TGG + chr4_4:58785168-58785187 Msa0690870:intron 50.0%
TTGTCGTCATGCAGCTCGAA+AGG - chr4_4:58785239-58785258 None:intergenic 50.0%
AATATTGCGGATGGAGGGGA+AGG + chr4_4:58785323-58785342 Msa0690870:CDS 50.0%
TCTCTTACTACATGGGGGGA+AGG - chr4_4:58785712-58785731 None:intergenic 50.0%
CGAGTTAGCCGAGTCAAGTT+TGG - chr4_4:58786197-58786216 None:intergenic 50.0%
ATCCCTAGTATCCCTACGCA+AGG - chr4_4:58786938-58786957 None:intergenic 50.0%
TGCGTAGGGATACTAGGGAT+TGG + chr4_4:58786938-58786957 Msa0690870:intron 50.0%
AGCAGCACGGAATACGAATG+CGG - chr4_4:58786978-58786997 None:intergenic 50.0%
TAGATCTGATAGAGGGGGAG+CGG - chr4_4:58787017-58787036 None:intergenic 50.0%
AGAGGGCTGCAATTCAGTTG+CGG - chr4_4:58787190-58787209 None:intergenic 50.0%
GCGATCTTGTTCCCATCGTT+TGG - chr4_4:58787232-58787251 None:intergenic 50.0%
! GATGATGATGCTGCATCCCA+AGG + chr4_4:58787413-58787432 Msa0690870:intron 50.0%
AGAGGCCAACAAAGAGCTAC+CGG + chr4_4:58787593-58787612 Msa0690870:intron 50.0%
GCTACCGGAGGTGATAAAAG+TGG + chr4_4:58787608-58787627 Msa0690870:intron 50.0%
ATCGCACCCACATCAGTACT+AGG - chr4_4:58787742-58787761 None:intergenic 50.0%
GTAGGTGGCAGATGAACTTG+TGG + chr4_4:58788725-58788744 Msa0690870:intron 50.0%
ATCCTATCTGCAGGAGCTAG+AGG + chr4_4:58789204-58789223 Msa0690870:intron 50.0%
! TTCCTCTAGCTCCTGCAGAT+AGG - chr4_4:58789209-58789228 None:intergenic 50.0%
AAAGATACACCTCCACTGGG+AGG - chr4_4:58784345-58784364 None:intergenic 50.0%
GTCTCCCATAACGTGAAACC+CGG - chr4_4:58789580-58789599 None:intergenic 50.0%
GAGGTTGGGTATAGCAGAAG+AGG - chr4_4:58789606-58789625 None:intergenic 50.0%
CTGCTATACCCAACCTCAGT+TGG + chr4_4:58789609-58789628 Msa0690870:intron 50.0%
! GAATTTGCTTGTCCTGCTGG+CGG + chr4_4:58790033-58790052 Msa0690870:intron 50.0%
!! TCATGTAGAGAGGTTCTGGG+AGG + chr4_4:58790364-58790383 Msa0690870:intron 50.0%
GTTGACACGCTTGAAGCTGA+AGG - chr4_4:58790622-58790641 None:intergenic 50.0%
ATAGACCAGAGAGCCTCACA+AGG - chr4_4:58791117-58791136 None:intergenic 50.0%
AGGAGATCTTAGGGAACGCG+GGG - chr4_4:58781374-58781393 None:intergenic 55.0%
GAGGAGATCTTAGGGAACGC+GGG - chr4_4:58781375-58781394 None:intergenic 55.0%
GGTTATTCGGCGAGGGAAAG+AGG - chr4_4:58781394-58781413 None:intergenic 55.0%
GAGAGAGAGAGAGAGAGGTG+AGG - chr4_4:58781438-58781457 None:intergenic 55.0%
TGCGTTCCCATCCTGTAGTG+AGG - chr4_4:58781573-58781592 None:intergenic 55.0%
TCGTCCACGGACGATTGATG+CGG - chr4_4:58781597-58781616 None:intergenic 55.0%
TCAATCGTCCGTGGACGAAG+AGG + chr4_4:58781599-58781618 Msa0690870:CDS 55.0%
TTCCTCGTCCTCTTCGTCCA+CGG - chr4_4:58781610-58781629 None:intergenic 55.0%
ACTACGCTTTCCGGCCAATC+AGG + chr4_4:58781645-58781664 Msa0690870:CDS 55.0%
TCCTGCTCGTTGAGCCTGAT+TGG - chr4_4:58781662-58781681 None:intergenic 55.0%
! TGATGACGATGCTGCTTCCC+AGG + chr4_4:58781773-58781792 Msa0690870:CDS 55.0%
GACTCACGCAACTACTGCCT+GGG - chr4_4:58781793-58781812 None:intergenic 55.0%
AGACTCACGCAACTACTGCC+TGG - chr4_4:58781794-58781813 None:intergenic 55.0%
!! GAAAAAGCGACGGGCTGTTG+GGG + chr4_4:58782590-58782609 Msa0690870:CDS 55.0%
!! AAAAAGCGACGGGCTGTTGG+GGG + chr4_4:58782591-58782610 Msa0690870:CDS 55.0%
CATGAAATGGGTAGGCAGGC+AGG - chr4_4:58783527-58783546 None:intergenic 55.0%
GGGGACAAACCACCATTGCT+TGG - chr4_4:58783680-58783699 None:intergenic 55.0%
! TGGTGGTTTGTCCCCTGATC+AGG + chr4_4:58783685-58783704 Msa0690870:CDS 55.0%
AGACACAGCGTCTTGGGCTT+AGG + chr4_4:58784058-58784077 Msa0690870:intron 55.0%
CTGCTCAAGCTCCTGCAGAT+AGG - chr4_4:58784106-58784125 None:intergenic 55.0%
AGCTCAGGAAATCCTCCCAG+TGG + chr4_4:58784330-58784349 Msa0690870:CDS 55.0%
TCAGGAAATCCTCCCAGTGG+AGG + chr4_4:58784333-58784352 Msa0690870:CDS 55.0%
! TCCTGTTGGCTGCTGTGATG+TGG + chr4_4:58784816-58784835 Msa0690870:intron 55.0%
GACACGTCCTCATGCAACTG+TGG + chr4_4:58784888-58784907 Msa0690870:intron 55.0%
GTCTTGGGAGCTAGTTAGGG+TGG + chr4_4:58785143-58785162 Msa0690870:intron 55.0%
! GGGGAAGGTTCTAGCATGTC+AGG + chr4_4:58785338-58785357 Msa0690870:CDS 55.0%
CATGGGGGGAAGGAGAGTTA+CGG - chr4_4:58785702-58785721 None:intergenic 55.0%
AGATCTGATAGAGGGGGAGC+GGG - chr4_4:58787016-58787035 None:intergenic 55.0%
! TGGTGAGGGATGGTGGTTAC+CGG - chr4_4:58787052-58787071 None:intergenic 55.0%
! GAAAGTACGGTGGTGAGGGA+TGG - chr4_4:58787062-58787081 None:intergenic 55.0%
AGGGAAAGGGCGGGAAAGTA+CGG - chr4_4:58787075-58787094 None:intergenic 55.0%
GCAATCGTGCGTAGACGAAG+AGG + chr4_4:58787253-58787272 Msa0690870:intron 55.0%
GACAATCAGGCTCAACCAGC+AGG + chr4_4:58787291-58787310 Msa0690870:intron 55.0%
GAGAGCAGTGTTATCACCGG+CGG - chr4_4:58787369-58787388 None:intergenic 55.0%
CACCTCCGGTAGCTCTTTGT+TGG - chr4_4:58787601-58787620 None:intergenic 55.0%
GCTTTGCTAGCAACGAAGCC+TGG - chr4_4:58788217-58788236 None:intergenic 55.0%
!! AGCTCTGGAAATCCTCCCAG+TGG + chr4_4:58789414-58789433 Msa0690870:intron 55.0%
TCTGGAAATCCTCCCAGTGG+AGG + chr4_4:58789417-58789436 Msa0690870:intron 55.0%
TTCCCATAGGCTCCCTTCAC+TGG + chr4_4:58789513-58789532 Msa0690870:intron 55.0%
CTCCAGTGAAGGGAGCCTAT+GGG - chr4_4:58789518-58789537 None:intergenic 55.0%
TCCAGCCGGGTTTCACGTTA+TGG + chr4_4:58789572-58789591 Msa0690870:intron 55.0%
CCAGCCGGGTTTCACGTTAT+GGG + chr4_4:58789573-58789592 Msa0690870:intron 55.0%
! TCCTGCTGGCGGATGTGATA+TGG + chr4_4:58790044-58790063 Msa0690870:intron 55.0%
!! GAGGTTCTGGGAGGCTGTTA+TGG + chr4_4:58790373-58790392 Msa0690870:intron 55.0%
! GGGGAAGGTTCTAGCATGTC+AGG + chr4_4:58785338-58785357 Msa0690870:CDS 55.0%
GTCAGGCATGCATCAGTCAC+AGG + chr4_4:58790591-58790610 Msa0690870:intron 55.0%
GACACGCTTGAAGCTGAAGG+AGG - chr4_4:58790619-58790638 None:intergenic 55.0%
TTGGTAGGTCAGCAGCAGCT+TGG + chr4_4:58790821-58790840 Msa0690870:three_prime_UTR 55.0%
GGAGATCTTAGGGAACGCGG+GGG - chr4_4:58781373-58781392 None:intergenic 60.0%
GCTCGTTGAGCCTGATTGGC+CGG - chr4_4:58781658-58781677 None:intergenic 60.0%
GCCAATCAGGCTCAACGAGC+AGG + chr4_4:58781658-58781677 Msa0690870:CDS 60.0%
ACTCCGGCTAGACGGTAACC+CGG - chr4_4:58781688-58781707 None:intergenic 60.0%
GTCTGCTCACTCCGGCTAGA+CGG - chr4_4:58781696-58781715 None:intergenic 60.0%
TAGCCGGAGTGAGCAGACCA+CGG + chr4_4:58781698-58781717 Msa0690870:CDS 60.0%
GAGAGCAGCGTTATCACCGG+CGG - chr4_4:58781730-58781749 None:intergenic 60.0%
GCCACATCACAGCAGCCAAC+AGG - chr4_4:58784820-58784839 None:intergenic 60.0%
GGGAGCTAGTTAGGGTGGTG+TGG + chr4_4:58785148-58785167 Msa0690870:intron 60.0%
CCAGGGAGTGGAGGTGATGT+CGG - chr4_4:58785416-58785435 None:intergenic 60.0%
GATCTGATAGAGGGGGAGCG+GGG - chr4_4:58787015-58787034 None:intergenic 60.0%
! GGGATGGTGGTTACCGGTGA+GGG - chr4_4:58787046-58787065 None:intergenic 60.0%
! AGGGATGGTGGTTACCGGTG+AGG - chr4_4:58787047-58787066 None:intergenic 60.0%
AGTACGGTGGTGAGGGATGG+TGG - chr4_4:58787059-58787078 None:intergenic 60.0%
! GCGGGAAAGTACGGTGGTGA+GGG - chr4_4:58787066-58787085 None:intergenic 60.0%
! GAAAGGGCGGGAAAGTACGG+TGG - chr4_4:58787072-58787091 None:intergenic 60.0%
GGCCAACAAAGAGCTACCGG+AGG + chr4_4:58787596-58787615 Msa0690870:intron 60.0%
! AGACAGAGCGTCTTGGGCTC+AGG + chr4_4:58789161-58789180 Msa0690870:intron 60.0%
CCTCCAGTGAAGGGAGCCTA+TGG - chr4_4:58789519-58789538 None:intergenic 60.0%
CCATAGGCTCCCTTCACTGG+AGG + chr4_4:58789516-58789535 Msa0690870:intron 60.0%
ATGTGGGCACCTCTTCCAGC+CGG + chr4_4:58789558-58789577 Msa0690870:intron 60.0%
ACGTGAAACCCGGCTGGAAG+AGG - chr4_4:58789570-58789589 None:intergenic 60.0%
CCCATAACGTGAAACCCGGC+TGG - chr4_4:58789576-58789595 None:intergenic 60.0%
GCCATATCACATCCGCCAGC+AGG - chr4_4:58790048-58790067 None:intergenic 60.0%
GGGAGTGGAGGTGATGTTGG+AGG - chr4_4:58790649-58790668 None:intergenic 60.0%
CCAGGGAGTGGAGGTGATGT+TGG - chr4_4:58785416-58785435 None:intergenic 60.0%
CCAACATCACCTCCACTCCC+TGG + chr4_4:58790649-58790668 Msa0690870:intron 60.0%
AGGGTCCTTGTGAGGCTCTC+TGG + chr4_4:58791109-58791128 Msa0690870:three_prime_UTR 60.0%
CAGCGGCGGTTATTCGGCGA+GGG - chr4_4:58781401-58781420 None:intergenic 65.0%
ACAGCGGCGGTTATTCGGCG+AGG - chr4_4:58781402-58781421 None:intergenic 65.0%
GCAGCCGCATCAATCGTCCG+TGG + chr4_4:58781590-58781609 Msa0690870:CDS 65.0%
GTCCGTGGACGAAGAGGACG+AGG + chr4_4:58781605-58781624 Msa0690870:CDS 65.0%
! GGCTCAACGAGCAGGAGTGC+CGG + chr4_4:58781666-58781685 Msa0690870:CDS 65.0%
!! GCTCAACGAGCAGGAGTGCC+GGG + chr4_4:58781667-58781686 Msa0690870:CDS 65.0%
GTGCCGGGTTACCGTCTAGC+CGG + chr4_4:58781682-58781701 Msa0690870:CDS 65.0%
AGCCGGAGTGAGCAGACCAC+GGG + chr4_4:58781699-58781718 Msa0690870:CDS 65.0%
TCCCCGTGGTCTGCTCACTC+CGG - chr4_4:58781704-58781723 None:intergenic 65.0%
GGGAGTGGAGGTGATGTCGG+AGG - chr4_4:58785413-58785432 None:intergenic 65.0%
CCGACATCACCTCCACTCCC+TGG + chr4_4:58785413-58785432 Msa0690870:CDS 65.0%
! GGCGGGAAAGTACGGTGGTG+AGG - chr4_4:58787067-58787086 None:intergenic 65.0%
! GGCTCAACCAGCAGGAGTGC+CGG + chr4_4:58787299-58787318 Msa0690870:intron 65.0%
!! TCAACCAGCAGGAGTGCCGG+CGG + chr4_4:58787302-58787321 Msa0690870:intron 65.0%
GTCTGCTCGCTCCGGCTAGA+CGG - chr4_4:58787335-58787354 None:intergenic 65.0%
AGCCGGAGCGAGCAGACGAT+CGG + chr4_4:58787338-58787357 Msa0690870:intron 65.0%
TCCCGATCGTCTGCTCGCTC+CGG - chr4_4:58787343-58787362 None:intergenic 65.0%
TGTGGGCACCTCTTCCAGCC+GGG + chr4_4:58789559-58789578 Msa0690870:intron 65.0%
GCCGGAGTGAGCAGACCACG+GGG + chr4_4:58781700-58781719 Msa0690870:CDS 70.0%
GCCGGAGCGAGCAGACGATC+GGG + chr4_4:58787339-58787358 Msa0690870:intron 70.0%
CAGACGATCGGGACAGCCGC+CGG + chr4_4:58787350-58787369 Msa0690870:intron 70.0%
CAGACCACGGGGACAGCCGC+CGG + chr4_4:58781711-58781730 Msa0690870:CDS 75.0%
ATCACCGGCGGCTGTCCCCG+TGG - chr4_4:58781718-58781737 None:intergenic 75.0%
!! ACCAGCAGGAGTGCCGGCGG+CGG + chr4_4:58787305-58787324 Msa0690870:intron 75.0%
GCTAGACGGCAACCCGCCGC+CGG - chr4_4:58787321-58787340 None:intergenic 75.0%
!! GCGGCGGGTTGCCGTCTAGC+CGG + chr4_4:58787321-58787340 Msa0690870:intron 75.0%
!!! CCAGCAGGAGTGCCGGCGGC+GGG + chr4_4:58787306-58787325 Msa0690870:intron 80.0%
! CCCGCCGCCGGCACTCCTGC+TGG - chr4_4:58787309-58787328 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 58781290 58791146 58781290 ID=Msa0690870;Name=Msa0690870
chr4_4 mRNA 58781290 58791146 58781290 ID=Msa0690870-mRNA-1;Parent=Msa0690870;Name=Msa0690870-mRNA-1;_AED=0.28;_eAED=0.29;_QI=292|0.88|0.9|1|0.88|0.8|10|912|354
chr4_4 exon 58781290 58781805 58781290 ID=Msa0690870-mRNA-1:exon:15881;Parent=Msa0690870-mRNA-1
chr4_4 exon 58782581 58782654 58782581 ID=Msa0690870-mRNA-1:exon:15882;Parent=Msa0690870-mRNA-1
chr4_4 exon 58783142 58783185 58783142 ID=Msa0690870-mRNA-1:exon:15883;Parent=Msa0690870-mRNA-1
chr4_4 exon 58783644 58783706 58783644 ID=Msa0690870-mRNA-1:exon:15884;Parent=Msa0690870-mRNA-1
chr4_4 exon 58783813 58783959 58783813 ID=Msa0690870-mRNA-1:exon:15885;Parent=Msa0690870-mRNA-1
chr4_4 exon 58784060 58784128 58784060 ID=Msa0690870-mRNA-1:exon:15886;Parent=Msa0690870-mRNA-1
chr4_4 exon 58784249 58784383 58784249 ID=Msa0690870-mRNA-1:exon:15887;Parent=Msa0690870-mRNA-1
chr4_4 exon 58784889 58784959 58784889 ID=Msa0690870-mRNA-1:exon:15888;Parent=Msa0690870-mRNA-1
chr4_4 exon 58785232 58785916 58785232 ID=Msa0690870-mRNA-1:exon:15889;Parent=Msa0690870-mRNA-1
chr4_4 exon 58790682 58791146 58790682 ID=Msa0690870-mRNA-1:exon:15890;Parent=Msa0690870-mRNA-1
chr4_4 five_prime_UTR 58781290 58781581 58781290 ID=Msa0690870-mRNA-1:five_prime_utr;Parent=Msa0690870-mRNA-1
chr4_4 CDS 58781582 58781805 58781582 ID=Msa0690870-mRNA-1:cds;Parent=Msa0690870-mRNA-1
chr4_4 CDS 58782581 58782654 58782581 ID=Msa0690870-mRNA-1:cds;Parent=Msa0690870-mRNA-1
chr4_4 CDS 58783142 58783185 58783142 ID=Msa0690870-mRNA-1:cds;Parent=Msa0690870-mRNA-1
chr4_4 CDS 58783644 58783706 58783644 ID=Msa0690870-mRNA-1:cds;Parent=Msa0690870-mRNA-1
chr4_4 CDS 58783813 58783959 58783813 ID=Msa0690870-mRNA-1:cds;Parent=Msa0690870-mRNA-1
chr4_4 CDS 58784060 58784128 58784060 ID=Msa0690870-mRNA-1:cds;Parent=Msa0690870-mRNA-1
chr4_4 CDS 58784249 58784383 58784249 ID=Msa0690870-mRNA-1:cds;Parent=Msa0690870-mRNA-1
chr4_4 CDS 58784889 58784959 58784889 ID=Msa0690870-mRNA-1:cds;Parent=Msa0690870-mRNA-1
chr4_4 CDS 58785232 58785469 58785232 ID=Msa0690870-mRNA-1:cds;Parent=Msa0690870-mRNA-1
chr4_4 three_prime_UTR 58785470 58785916 58785470 ID=Msa0690870-mRNA-1:three_prime_utr;Parent=Msa0690870-mRNA-1
chr4_4 three_prime_UTR 58790682 58791146 58790682 ID=Msa0690870-mRNA-1:three_prime_utr;Parent=Msa0690870-mRNA-1
Gene Sequence

>Msa0690870

ATGGGAACGCAGCCGCATCAATCGTCCGTGGACGAAGAGGACGAGGAATTGATGGGTTGTGGAACTACGCTTTCCGGCCAATCAGGCTCAACGAGCAGGAGTGCCGGGTTACCGTCTAGCCGGAGTGAGCAGACCACGGGGACAGCCGCCGGTGATAACGCTGCTCTCAAATTGAATCATCTTGATATACATGATGACGATGCTGCTTCCCAGGCAGTAGTTGCTACCAAGAAGAAAAAGCGACGGGCTGTTGGGGGTGATAAGAATGGAAGAGGGCTCCGGCAATTTAGTATGAAAGTGTGTGAGAAGGTAGAAAGTAAAGGAAGAACAACTTACAATGAGGTGGCAGATGAACTTGTGGCTGAATTTTCTGACCCAAGCAATGGTGGTTTGTCCCCTGATCAGCAACAATATGATGAGAAAAACATCCGTCGAAGGGTCTATGATGCTCTGAATGTTCTTATGGCTATGAATATTATTTCCAAGGATAAAAAAGAAATACAATGGAAGGGTCTTCCTCGTACCAGTCTGAGTGATATTGAAGAACTAAAGACACAGCGTCTTGGGCTTAGGAGTAGAATTGAAAGGAAAGCAGCCTATCTGCAGGAGCTTGAGCAGCAATTTCTGTTTGCTAACCGCTTTTATTATTGCTACAAGTTTGTAGGTCTTCAGAACCTTATTCAACGAAATGAACAATTATATAGCTCAGGAAATCCTCCCAGTGGAGGTGTATCTTTACCTTTTATTCTGGTTCAGACACGTCCTCATGCAACTGTGGAAGTGGAAATATCAGAAGACATGCAGCTTGTTCATTTTGATTTCAATAGTTCTCCTTTCGAGCTGCATGACGACAATTATGTTCTCAAGGCAATGGATTTTGGTGGGGGTGAGAGACCACAGAGTGACAATGTTACACACAATATTGCGGATGGAGGGGAAGGTTCTAGCATGTCAGGCATGTATCAATCACAGGTTCCTCAGTCAGTTTCAAATATGTTAGTTAGGCCTCCGACATCACCTCCACTCCCTGGAATATTAAAGGCAAGAGTTAAGCAAGAGAATTGA
Protein sequence

>Msa0690870

MGTQPHQSSVDEEDEELMGCGTTLSGQSGSTSRSAGLPSSRSEQTTGTAAGDNAALKLNHLDIHDDDAASQAVVATKKKKRRAVGGDKNGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFSDPSNGGLSPDQQQYDEKNIRRRVYDALNVLMAMNIISKDKKEIQWKGLPRTSLSDIEELKTQRLGLRSRIERKAAYLQELEQQFLFANRFYYCYKFVGLQNLIQRNEQLYSSGNPPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSSPFELHDDNYVLKAMDFGGGERPQSDNVTHNIADGGEGSSMSGMYQSQVPQSVSNMLVRPPTSPPLPGILKARVKQEN*