AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0691220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0691220 MtrunA17_Chr4g0040301 96.788 716 21 1 170 885 18 731 0.0 1428
Msa0691220 MtrunA17_Chr1g0183681 28.468 692 345 15 132 772 381 973 1.27e-87 303
Msa0691220 MtrunA17_Chr5g0393461 31.171 555 312 11 142 678 184 686 6.86e-72 255
Msa0691220 MtrunA17_Chr8g0384531 29.498 617 346 17 100 689 343 897 3.89e-69 249
Msa0691220 MtrunA17_Chr5g0403921 29.338 559 304 15 134 680 176 655 9.97e-64 229
Msa0691220 MtrunA17_Chr1g0163011 29.777 628 336 20 99 686 161 723 4.15e-58 213
Msa0691220 MtrunA17_Chr4g0052341 27.141 619 327 20 142 739 745 1260 9.80e-52 197
Msa0691220 MtrunA17_Chr1g0175191 41.520 171 99 1 531 700 1061 1231 7.72e-36 147
Msa0691220 MtrunA17_Chr1g0175191 30.612 294 179 7 132 419 511 785 5.38e-35 144
Msa0691220 MtrunA17_Chr1g0190381 30.411 365 214 9 338 680 4 350 2.40e-33 135
Msa0691220 MtrunA17_Chr3g0095091 43.558 163 86 2 531 687 886 1048 1.02e-32 137
Msa0691220 MtrunA17_Chr3g0095091 26.950 282 170 8 141 411 570 826 9.94e-24 108
Msa0691220 MtrunA17_Chr4g0066651 30.357 280 169 8 141 409 988 1252 1.62e-32 137
Msa0691220 MtrunA17_Chr4g0066651 39.869 153 91 1 531 682 1307 1459 5.85e-29 125
Msa0691220 MtrunA17_Chr5g0394201 37.786 262 133 8 531 786 671 908 2.43e-32 135
Msa0691220 MtrunA17_Chr5g0394201 29.245 318 196 11 145 456 366 660 1.44e-31 133
Msa0691220 MtrunA17_Chr5g0442141 31.124 347 185 10 531 853 932 1248 5.65e-32 135
Msa0691220 MtrunA17_Chr5g0442141 28.070 285 169 10 138 411 613 872 2.32e-25 113
Msa0691220 MtrunA17_Chr8g0348721 31.985 272 165 7 142 406 987 1245 1.18e-31 134
Msa0691220 MtrunA17_Chr8g0348721 43.651 126 70 1 531 655 1312 1437 4.90e-23 106
Msa0691220 MtrunA17_Chr4g0066741 43.709 151 84 1 531 680 488 638 1.38e-31 133
Msa0691220 MtrunA17_Chr4g0066741 31.142 289 171 7 127 411 173 437 1.32e-30 130
Msa0691220 MtrunA17_Chr4g0017211 32.000 275 168 6 142 408 1450 1713 1.90e-31 133
Msa0691220 MtrunA17_Chr4g0017211 43.796 137 74 1 550 683 1830 1966 3.16e-25 113
Msa0691220 MtrunA17_Chr2g0286291 31.579 285 167 5 131 411 180 440 9.05e-31 130
Msa0691220 MtrunA17_Chr2g0286291 45.033 151 82 1 531 680 491 641 6.64e-30 127
Msa0691220 MtrunA17_Chr1g0205891 40.196 204 95 5 522 716 668 853 1.57e-30 130
Msa0691220 MtrunA17_Chr1g0205891 32.234 273 165 9 142 409 376 633 4.46e-30 128
Msa0691220 MtrunA17_Chr7g0257101 37.912 182 109 1 505 682 1161 1342 2.64e-29 126
Msa0691220 MtrunA17_Chr7g0257101 26.829 287 181 9 132 407 568 836 1.53e-24 110
Msa0691220 MtrunA17_Chr7g0248031 32.353 272 165 6 142 406 994 1253 3.84e-29 126
Msa0691220 MtrunA17_Chr7g0248031 44.444 126 69 1 531 655 1320 1445 3.77e-23 106
Msa0691220 MtrunA17_Chr3g0137091 39.080 174 98 3 508 680 594 760 5.25e-28 122
Msa0691220 MtrunA17_Chr3g0137091 30.928 291 149 8 145 410 292 555 1.17e-26 117
Msa0691220 MtrunA17_Chr7g0231521 37.423 163 89 2 532 682 286 447 2.91e-24 109
Msa0691220 MtrunA17_Chr7g0231521 32.075 212 118 6 138 334 35 235 4.11e-19 92.8
Msa0691220 MtrunA17_Chr7g0232121 37.423 163 89 2 532 682 365 526 5.59e-24 108
Msa0691220 MtrunA17_Chr7g0232121 31.229 301 171 11 138 418 35 319 1.54e-23 107
Msa0691220 MtrunA17_Chr1g0168031 37.594 133 83 0 549 681 1004 1136 3.95e-21 99.8
Msa0691220 MtrunA17_Chr1g0168031 28.629 248 129 10 161 379 533 761 8.45e-21 98.6
Msa0691220 MtrunA17_Chr2g0296421 31.579 228 131 6 494 705 801 1019 2.82e-20 97.1
Msa0691220 MtrunA17_Chr2g0296421 27.363 201 115 7 145 325 514 703 4.10e-11 67.0
Msa0691220 MtrunA17_Chr1g0212331 38.095 126 78 0 550 675 887 1012 1.18e-19 94.7
Msa0691220 MtrunA17_Chr7g0255821 25.000 296 168 9 130 385 189 470 1.51e-19 94.4
Msa0691220 MtrunA17_Chr7g0255821 32.484 157 103 2 548 701 666 822 1.24e-15 81.6
Msa0691220 MtrunA17_Chr1g0190391 29.289 239 120 9 132 335 572 796 1.68e-19 94.0
Msa0691220 MtrunA17_Chr2g0320751 34.667 150 94 1 532 681 854 999 3.32e-19 93.6
Msa0691220 MtrunA17_Chr2g0320751 25.000 304 162 8 161 411 397 687 3.88e-17 86.7
Msa0691220 MtrunA17_Chr2g0281601 37.692 130 81 0 546 675 1146 1275 6.74e-19 92.4
Msa0691220 MtrunA17_Chr4g0069451 31.111 135 93 0 532 666 470 604 9.98e-19 91.3
Msa0691220 MtrunA17_Chr4g0069451 25.524 286 165 11 133 400 165 420 2.18e-12 70.9
Msa0691220 MtrunA17_Chr7g0233021 36.478 159 90 4 546 697 1048 1202 9.52e-18 89.0
Msa0691220 MtrunA17_Chr8g0352361 34.132 167 94 5 546 705 713 870 3.15e-17 87.0
Msa0691220 MtrunA17_Chr8g0352361 26.961 204 118 7 145 328 364 556 2.58e-12 70.9
Msa0691220 MtrunA17_Chr7g0225791 35.294 153 93 2 549 695 1103 1255 6.93e-17 85.9
Msa0691220 MtrunA17_Chr7g0233001 36.170 141 84 2 549 683 338 478 7.16e-17 84.7
Msa0691220 MtrunA17_Chr2g0320781 36.090 133 79 2 549 675 110 242 9.43e-17 80.9
Msa0691220 MtrunA17_Chr4g0047081 36.879 141 83 2 549 683 1053 1193 9.51e-17 85.5
Msa0691220 MtrunA17_Chr4g0024921 32.353 136 92 0 550 685 784 919 1.32e-16 85.1
Msa0691220 MtrunA17_Chr7g0232971 36.806 144 80 4 549 683 1114 1255 1.45e-16 85.1
Msa0691220 MtrunA17_Chr7g0232991 41.121 107 62 1 578 683 511 617 1.09e-15 81.6
Msa0691220 MtrunA17_Chr3g0114161 31.737 167 101 4 541 701 1058 1217 2.17e-15 81.3
Msa0691220 MtrunA17_Chr3g0086111 33.333 123 82 0 541 663 543 665 8.76e-15 79.3
Msa0691220 MtrunA17_Chr3g0086111 26.736 288 164 15 117 385 161 420 7.80e-11 66.2
Msa0691220 MtrunA17_Chr1g0191141 30.539 167 103 4 541 701 913 1072 3.33e-14 77.4
Msa0691220 MtrunA17_Chr5g0437621 32.374 139 88 2 549 681 1122 1260 4.85e-14 76.6
Msa0691220 MtrunA17_Chr7g0224051 30.539 167 103 4 541 701 927 1086 1.14e-13 75.5
Msa0691220 MtrunA17_Chr7g0233031 37.500 112 68 2 587 697 1105 1215 1.52e-13 75.1
Msa0691220 MtrunA17_Chr5g0428401 29.012 162 100 4 533 682 1476 1634 7.43e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0691220 AT1G03750.1 65.421 856 255 10 40 881 34 862 0.0 1122
Msa0691220 AT2G18760.4 29.051 685 340 14 132 775 375 954 1.92e-89 308
Msa0691220 AT2G18760.1 29.051 685 340 14 132 775 375 954 1.92e-89 308
Msa0691220 AT2G18760.2 29.051 685 340 14 132 775 375 954 1.92e-89 308
Msa0691220 AT2G18760.7 29.051 685 340 14 132 775 375 954 1.92e-89 308
Msa0691220 AT2G18760.5 29.051 685 340 14 132 775 375 954 1.92e-89 308
Msa0691220 AT2G18760.6 29.051 685 340 14 132 775 375 954 1.92e-89 308
Msa0691220 AT2G18760.3 29.051 685 340 14 132 775 434 1013 2.71e-89 309
Msa0691220 AT3G19210.3 32.937 589 310 18 118 678 151 682 9.20e-79 272
Msa0691220 AT3G19210.1 32.937 589 310 18 118 678 151 682 5.86e-78 272
Msa0691220 AT3G19210.2 32.598 589 310 18 118 678 151 680 1.72e-75 265
Msa0691220 AT5G63950.1 28.843 579 331 14 134 689 369 889 4.22e-70 252
Msa0691220 AT5G63950.2 28.496 565 334 13 134 689 369 872 2.83e-66 241
Msa0691220 AT5G66750.1 30.769 559 296 15 135 681 195 674 4.16e-62 225
Msa0691220 AT3G54280.1 30.783 575 316 15 138 683 1447 1968 7.16e-61 226
Msa0691220 AT3G54280.2 30.783 575 316 15 138 683 1478 1999 9.35e-61 226
Msa0691220 AT2G13370.1 30.335 567 291 18 138 687 621 1100 3.53e-59 221
Msa0691220 AT2G13370.2 30.335 567 291 18 138 687 621 1100 3.53e-59 221
Msa0691220 AT2G13370.3 30.335 567 291 18 138 687 621 1100 3.53e-59 221
Msa0691220 AT4G31900.3 29.821 560 277 15 134 680 217 673 2.00e-58 218
Msa0691220 AT4G31900.1 29.821 560 277 15 134 680 217 673 2.02e-58 218
Msa0691220 AT4G31900.2 29.821 560 277 15 134 680 176 632 2.12e-58 218
Msa0691220 AT2G02090.1 29.225 568 311 16 145 675 216 729 6.72e-54 201
Msa0691220 AT5G44800.1 27.895 570 300 16 142 692 689 1166 2.20e-50 194
Msa0691220 AT3G12810.2 40.936 171 100 1 531 700 1070 1240 5.39e-36 148
Msa0691220 AT3G12810.2 30.303 297 176 8 132 419 522 796 3.80e-34 142
Msa0691220 AT3G12810.1 40.936 171 100 1 531 700 1074 1244 5.49e-36 148
Msa0691220 AT3G12810.1 30.303 297 176 8 132 419 526 800 3.64e-34 142
Msa0691220 AT1G02670.6 27.289 568 314 22 161 675 116 637 2.21e-34 140
Msa0691220 AT1G02670.3 27.289 568 314 22 161 675 143 664 3.17e-34 140
Msa0691220 AT5G19310.2 33.333 273 161 8 142 409 122 378 3.79e-34 141
Msa0691220 AT5G19310.2 40.642 187 92 4 531 716 430 598 1.20e-30 130
Msa0691220 AT5G19310.1 33.333 273 161 8 142 409 386 642 4.74e-34 141
Msa0691220 AT5G19310.1 40.860 186 91 4 532 716 695 862 2.73e-30 129
Msa0691220 AT1G02670.7 26.465 563 302 20 161 675 143 641 1.03e-33 139
Msa0691220 AT1G02670.1 26.465 563 302 20 161 675 154 652 1.35e-33 138
Msa0691220 AT3G06010.1 32.246 276 167 8 142 412 403 663 1.62e-33 140
Msa0691220 AT3G06010.1 40.642 187 92 4 531 716 712 880 2.13e-30 130
Msa0691220 AT1G08600.1 41.935 186 88 3 511 676 1067 1252 1.38e-31 134
Msa0691220 AT1G08600.1 28.716 296 180 8 132 412 709 988 3.63e-24 110
Msa0691220 AT1G08600.4 41.935 186 88 3 511 676 1088 1273 1.51e-31 134
Msa0691220 AT1G08600.4 27.564 312 184 10 132 412 709 1009 2.15e-24 110
Msa0691220 AT1G08600.3 41.935 186 88 3 511 676 1088 1273 1.51e-31 134
Msa0691220 AT1G08600.3 27.564 312 184 10 132 412 709 1009 2.15e-24 110
Msa0691220 AT1G08600.2 41.935 186 88 3 511 676 1088 1273 1.51e-31 134
Msa0691220 AT1G08600.2 27.564 312 184 10 132 412 709 1009 2.15e-24 110
Msa0691220 AT1G02670.5 27.106 546 299 22 161 653 116 615 1.59e-31 131
Msa0691220 AT2G28290.1 41.830 153 88 1 531 682 1072 1224 2.44e-31 134
Msa0691220 AT2G28290.1 30.742 283 170 8 138 409 750 1017 3.32e-30 130
Msa0691220 AT2G28290.5 41.830 153 88 1 531 682 1073 1225 2.44e-31 134
Msa0691220 AT2G28290.5 30.742 283 170 8 138 409 751 1018 3.29e-30 130
Msa0691220 AT2G28290.6 41.830 153 88 1 531 682 1073 1225 2.47e-31 134
Msa0691220 AT2G28290.6 30.742 283 170 8 138 409 751 1018 3.26e-30 130
Msa0691220 AT2G28290.3 41.830 153 88 1 531 682 1072 1224 2.54e-31 133
Msa0691220 AT2G28290.3 30.742 283 170 8 138 409 750 1017 3.34e-30 130
Msa0691220 AT2G28290.4 41.830 153 88 1 531 682 1072 1224 2.54e-31 133
Msa0691220 AT2G28290.4 30.742 283 170 8 138 409 750 1017 3.34e-30 130
Msa0691220 AT1G02670.2 27.106 546 299 22 161 653 143 642 2.61e-31 131
Msa0691220 AT2G28290.2 41.830 153 88 1 531 682 1072 1224 2.72e-31 133
Msa0691220 AT2G28290.2 30.742 283 170 8 138 409 750 1017 3.55e-30 130
Msa0691220 AT3G06400.3 30.717 293 175 5 123 411 170 438 6.94e-31 131
Msa0691220 AT3G06400.3 43.421 152 85 1 530 680 488 639 1.28e-29 127
Msa0691220 AT3G06400.2 30.717 293 175 5 123 411 170 438 7.17e-31 131
Msa0691220 AT3G06400.2 43.421 152 85 1 530 680 488 639 1.34e-29 127
Msa0691220 AT3G06400.1 30.717 293 175 5 123 411 170 438 7.23e-31 131
Msa0691220 AT3G06400.1 43.421 152 85 1 530 680 488 639 1.36e-29 127
Msa0691220 AT5G18620.2 31.293 294 173 6 122 411 175 443 1.70e-30 130
Msa0691220 AT5G18620.2 42.763 152 86 1 530 680 493 644 1.05e-28 124
Msa0691220 AT5G18620.1 31.293 294 173 6 122 411 175 443 1.83e-30 130
Msa0691220 AT5G18620.1 42.763 152 86 1 530 680 493 644 1.08e-28 124
Msa0691220 AT2G46020.5 30.389 283 178 7 131 406 969 1239 6.75e-30 129
Msa0691220 AT2G46020.5 41.270 126 73 1 531 655 1306 1431 4.30e-21 100
Msa0691220 AT2G46020.1 30.389 283 178 7 131 406 969 1239 6.75e-30 129
Msa0691220 AT2G46020.1 41.270 126 73 1 531 655 1306 1431 4.30e-21 100
Msa0691220 AT2G46020.6 30.389 283 178 7 131 406 969 1239 6.75e-30 129
Msa0691220 AT2G46020.6 41.270 126 73 1 531 655 1306 1431 4.30e-21 100
Msa0691220 AT2G46020.2 30.986 284 176 7 131 406 969 1240 1.15e-29 128
Msa0691220 AT2G46020.2 41.270 126 73 1 531 655 1307 1432 4.30e-21 100
Msa0691220 AT2G46020.3 30.986 284 176 7 131 406 969 1240 1.15e-29 128
Msa0691220 AT2G46020.3 41.270 126 73 1 531 655 1307 1432 4.30e-21 100
Msa0691220 AT2G46020.4 30.986 284 176 7 131 406 969 1240 1.15e-29 128
Msa0691220 AT2G46020.4 41.270 126 73 1 531 655 1307 1432 4.30e-21 100
Msa0691220 AT2G25170.1 36.792 212 119 5 519 729 584 781 1.53e-29 127
Msa0691220 AT2G25170.1 28.877 374 186 13 111 454 261 584 1.05e-25 115
Msa0691220 AT2G25170.4 36.792 212 119 5 519 729 584 781 1.53e-29 127
Msa0691220 AT2G25170.4 28.877 374 186 13 111 454 261 584 1.05e-25 115
Msa0691220 AT2G25170.2 36.321 212 120 5 519 729 601 798 1.65e-29 127
Msa0691220 AT2G25170.2 28.877 374 186 13 111 454 278 601 7.90e-26 115
Msa0691220 AT2G25170.3 36.321 212 120 5 519 729 610 807 1.79e-29 127
Msa0691220 AT2G25170.3 28.877 374 186 13 111 454 287 610 1.02e-25 115
Msa0691220 AT3G57300.1 39.474 152 92 0 531 682 1205 1356 7.84e-28 122
Msa0691220 AT3G57300.1 27.178 287 180 8 132 407 576 844 1.07e-25 115
Msa0691220 AT3G57300.4 39.474 152 92 0 531 682 1205 1356 7.84e-28 122
Msa0691220 AT3G57300.4 27.178 287 180 8 132 407 576 844 1.07e-25 115
Msa0691220 AT3G57300.2 39.474 152 92 0 531 682 1238 1389 8.71e-28 122
Msa0691220 AT3G57300.2 25.000 320 178 8 132 407 576 877 1.97e-22 104
Msa0691220 AT2G44980.1 40.000 165 98 1 528 691 364 528 3.79e-27 119
Msa0691220 AT2G44980.1 31.507 292 167 10 138 415 47 319 3.98e-24 109
Msa0691220 AT2G44980.3 31.438 299 166 12 138 415 47 327 1.90e-26 117
Msa0691220 AT2G44980.3 37.143 175 99 1 528 691 372 546 5.55e-26 115
Msa0691220 AT2G44980.2 37.143 175 99 1 528 691 373 547 5.80e-26 115
Msa0691220 AT2G44980.2 31.000 300 167 13 138 415 47 328 1.07e-23 108
Msa0691220 AT3G57300.3 27.178 287 180 8 132 407 576 844 1.04e-25 115
Msa0691220 AT3G16600.1 27.622 286 144 10 135 379 46 309 3.43e-23 105
Msa0691220 AT5G43530.1 26.644 289 164 10 161 416 681 954 9.17e-22 102
Msa0691220 AT5G43530.1 38.028 142 86 1 534 675 1115 1254 1.75e-21 101
Msa0691220 AT1G11100.5 28.269 283 144 9 142 379 399 667 2.25e-21 100
Msa0691220 AT1G11100.5 35.938 128 82 0 548 675 928 1055 4.37e-19 93.6
Msa0691220 AT1G11100.1 28.269 283 144 9 142 379 542 810 3.07e-21 100
Msa0691220 AT1G11100.1 35.938 128 82 0 548 675 1071 1198 5.76e-19 93.2
Msa0691220 AT5G22750.1 25.914 301 160 8 161 411 413 700 8.27e-20 95.9
Msa0691220 AT5G22750.1 34.899 149 97 0 533 681 864 1012 1.61e-19 94.7
Msa0691220 AT1G11100.3 35.938 128 82 0 548 675 972 1099 4.58e-19 93.6
Msa0691220 AT1G11100.4 35.938 128 82 0 548 675 1115 1242 5.42e-19 93.2
Msa0691220 AT1G11100.2 35.938 128 82 0 548 675 1114 1241 5.81e-19 93.2
Msa0691220 AT3G20010.3 38.095 126 78 0 550 675 628 753 7.26e-19 92.4
Msa0691220 AT3G20010.2 38.095 126 78 0 550 675 603 728 7.40e-19 92.4
Msa0691220 AT1G61140.3 35.938 128 82 0 548 675 965 1092 7.63e-19 92.8
Msa0691220 AT1G61140.1 35.938 128 82 0 548 675 1123 1250 7.92e-19 92.8
Msa0691220 AT3G20010.1 38.095 126 78 0 550 675 894 1019 1.49e-18 91.7
Msa0691220 AT3G20010.5 38.095 126 78 0 550 675 894 1019 1.49e-18 91.7
Msa0691220 AT3G20010.7 38.095 126 78 0 550 675 894 1019 1.49e-18 91.7
Msa0691220 AT5G05130.1 36.184 152 94 2 550 698 727 878 1.65e-18 91.7
Msa0691220 AT5G05130.1 23.891 293 164 9 161 409 279 556 6.02e-17 86.3
Msa0691220 AT1G50410.2 35.714 126 81 0 550 675 828 953 4.87e-18 90.1
Msa0691220 AT1G50410.1 35.714 126 81 0 550 675 828 953 4.87e-18 90.1
Msa0691220 AT1G50410.3 35.714 126 81 0 550 675 828 953 4.87e-18 90.1
Msa0691220 AT1G48310.2 31.544 149 100 1 531 679 472 618 1.32e-17 88.2
Msa0691220 AT1G48310.2 26.749 243 136 9 105 325 135 357 2.31e-12 71.2
Msa0691220 AT1G48310.1 31.544 149 100 1 531 679 467 613 1.34e-17 88.2
Msa0691220 AT1G48310.1 26.749 243 136 9 105 325 130 352 2.30e-12 71.2
Msa0691220 AT1G02670.4 36.111 180 96 7 161 327 143 316 1.61e-17 87.4
Msa0691220 AT1G48310.3 31.544 149 100 1 531 679 467 613 1.96e-17 87.4
Msa0691220 AT1G48310.3 26.749 243 136 9 105 325 130 352 4.50e-12 70.5
Msa0691220 AT1G05120.1 33.824 136 90 0 550 685 682 817 9.43e-17 85.9
Msa0691220 AT1G05120.2 33.824 136 90 0 550 685 725 860 1.04e-16 85.5
Msa0691220 AT1G05490.1 34.532 139 85 2 549 681 1216 1354 1.32e-16 85.5
Msa0691220 AT3G24340.1 36.806 144 85 3 549 686 944 1087 9.86e-16 82.8
Msa0691220 AT2G16390.1 39.024 123 70 2 546 663 708 830 1.43e-15 82.0
Msa0691220 AT2G16390.2 39.024 123 70 2 546 663 711 833 1.53e-15 82.0
Msa0691220 AT2G21450.2 34.437 151 94 2 533 678 628 778 9.64e-15 79.3
Msa0691220 AT2G21450.3 34.437 151 94 1 533 678 530 680 1.06e-14 79.0
Msa0691220 AT2G21450.1 34.437 151 94 2 533 678 621 771 1.13e-14 79.0
Msa0691220 AT3G42670.2 32.704 159 94 4 549 701 1073 1224 1.42e-14 79.0
Msa0691220 AT3G42670.3 32.704 159 94 4 549 701 1073 1224 1.42e-14 79.0
Msa0691220 AT3G42670.1 32.704 159 94 4 549 701 1073 1224 1.42e-14 79.0
Msa0691220 AT3G42670.4 32.704 159 94 4 549 701 1075 1226 1.49e-14 79.0
Msa0691220 AT5G20420.1 36.429 140 81 4 549 681 1079 1217 2.26e-14 78.2
Msa0691220 AT5G07810.1 35.088 114 74 0 550 663 556 669 1.42e-13 75.9
Msa0691220 AT1G48310.4 26.749 243 136 9 105 325 130 352 2.43e-12 70.9

Find 220 sgRNAs with CRISPR-Local

Find 425 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTCACACACTTTATTTC+TGG 0.152298 4_4:-59247427 None:intergenic
TTGACCTCTGACCATGTTTA+AGG 0.154434 4_4:-59249766 None:intergenic
GCATTTCTTGCTGCCATATT+TGG 0.166507 4_4:+59249278 Msa0691220:CDS
ACTCTGCAAGGAGGCTAAAT+TGG 0.199786 4_4:-59253005 None:intergenic
GTCTCCTTCTTTACCAAATA+TGG 0.224688 4_4:-59249291 None:intergenic
GTGGTGGGCAAGAGAGGATT+TGG 0.228532 4_4:-59247275 None:intergenic
TAGCCTCCTTGCAGAGTCTA+TGG 0.243019 4_4:+59253011 Msa0691220:CDS
TACTTGTTGTTCTTGGGTTT+GGG 0.246469 4_4:-59247368 None:intergenic
CTCTCAAACATTGCTGTCTC+TGG 0.257303 4_4:+59252003 Msa0691220:CDS
GGATTTGATATATGATAAAT+TGG 0.258903 4_4:+59249451 Msa0691220:CDS
TTACTTGTTGTTCTTGGGTT+TGG 0.263234 4_4:-59247369 None:intergenic
ACGTCTTCAAATTCAATATC+TGG 0.269463 4_4:-59252368 None:intergenic
TGTTTGTCAGGGTCATCTTT+GGG 0.277800 4_4:-59251114 None:intergenic
GCATCTTTAACTTGTTTGTC+AGG 0.288648 4_4:-59251126 None:intergenic
CATCATCCATTATTCAAAAC+TGG 0.289541 4_4:+59249369 Msa0691220:CDS
GGCTGAAAAGGTGGGTCATC+GGG 0.289921 4_4:-59247316 None:intergenic
GAATCCCTCACAAGACTTAC+AGG 0.293933 4_4:+59251867 Msa0691220:CDS
CTCTGATGGTGAACTTCCTT+TGG 0.297442 4_4:+59247516 Msa0691220:CDS
CTGCGACGATATGGTCTTAC+TGG 0.298138 4_4:+59249638 Msa0691220:CDS
TTGTTTGTCAGGGTCATCTT+TGG 0.298511 4_4:-59251115 None:intergenic
ATTCTGGTTTCTTCATTTCA+TGG 0.303861 4_4:-59252933 None:intergenic
AAAATAAAAGTTATGATGTT+TGG 0.304272 4_4:-59253265 None:intergenic
AAGTTTGCTGCTGCTGTCTA+TGG 0.305035 4_4:+59251150 Msa0691220:CDS
TGATTTGTACAAGAATAATA+AGG 0.311275 4_4:+59248365 Msa0691220:CDS
TCAGGGTCATCTTTGGGGTT+TGG 0.313078 4_4:-59251108 None:intergenic
CAGATTCAATTTGATCATAC+TGG 0.314349 4_4:+59247469 Msa0691220:CDS
ATTAAAACCCTGCGACGATA+TGG 0.325967 4_4:+59249629 Msa0691220:CDS
TGGTGAACTTCCTTTGGTTC+AGG 0.327763 4_4:+59247522 Msa0691220:CDS
CGCTTTCGCCATCGCTTGAA+AGG 0.346282 4_4:-59252891 None:intergenic
TTTCAGGATGCTGGACATAC+TGG 0.356832 4_4:+59251572 Msa0691220:intron
ATGGTTGTGATTGTGATTGT+TGG 0.356896 4_4:-59247192 None:intergenic
CTGTACCAGATGGAGCTATT+TGG 0.361393 4_4:+59250062 Msa0691220:CDS
TGGTGGGCAAGAGAGGATTT+GGG 0.361662 4_4:-59247274 None:intergenic
TCAACTCGTGCTGGTGGGCT+TGG 0.365537 4_4:+59251796 Msa0691220:CDS
GCAATTTGGACAAATCTATC+AGG 0.366294 4_4:-59249794 None:intergenic
GAAATTTGAAACAGGGGTCT+TGG 0.368193 4_4:+59249236 Msa0691220:intron
AAGGTAGGTCCTTGTTTATA+AGG 0.369061 4_4:-59249994 None:intergenic
TTGAGATATACTTGTTTGCT+TGG 0.370262 4_4:-59251693 None:intergenic
GGTGGGCAAGAGAGGATTTG+GGG 0.378252 4_4:-59247273 None:intergenic
CCGGTTTGCACCATGATATA+TGG 0.380002 4_4:-59249429 None:intergenic
AATAATAAGGGAGGCATCCT+TGG 0.383571 4_4:+59248378 Msa0691220:CDS
TACTGCTTCTCAAGACTTGA+TGG 0.385087 4_4:+59251618 Msa0691220:CDS
CCACCAACTAAGTCAATGTC+TGG 0.395022 4_4:-59251174 None:intergenic
CACCAGCACGAGTTGATATC+AGG 0.397103 4_4:-59251789 None:intergenic
AAGAAATGCTATTGTTTGAA+TGG 0.401109 4_4:-59249264 None:intergenic
CCATATATCATGGTGCAAAC+CGG 0.407631 4_4:+59249429 Msa0691220:CDS
CAGGACAGGTCCTTTCGATA+TGG 0.410442 4_4:+59251892 Msa0691220:CDS
GTATGGAAGGACAATACAAT+AGG 0.420283 4_4:-59250131 None:intergenic
CATTGCTGTCTCTGGGAAGA+TGG 0.424081 4_4:+59252011 Msa0691220:CDS
TCGTAATATTTGATCCCAAC+TGG 0.424506 4_4:+59251845 Msa0691220:CDS
AGAACTAGTTTATTCTCGTC+AGG 0.425773 4_4:+59251966 Msa0691220:CDS
GGGCTGAAAAGGTGGGTCAT+CGG 0.426839 4_4:-59247317 None:intergenic
CATGCAGAATGAGAGTTTCC+TGG 0.427298 4_4:+59251200 Msa0691220:CDS
TTTATAAGGCACTGAATGTC+AGG 0.429149 4_4:-59249980 None:intergenic
GTGGGTCATCGGGGTCTTCA+AGG 0.429260 4_4:-59247306 None:intergenic
TATGATAAATTGGAAGCAAA+TGG 0.429781 4_4:+59249461 Msa0691220:CDS
TGACCTCTGACCATGTTTAA+GGG 0.431535 4_4:-59249765 None:intergenic
TTAGTTGCACCTGGATCCCT+TGG 0.431876 4_4:+59249707 Msa0691220:CDS
AGGAAATCGCGGGGCTGAAA+AGG 0.432686 4_4:-59247328 None:intergenic
CTCTGCAAGGAGGCTAAATT+GGG 0.434237 4_4:-59253004 None:intergenic
AATCCTGTAAGTGTCAAAAC+TGG 0.440969 4_4:-59249501 None:intergenic
AACTAATTTACGTCAGTCTC+TGG 0.443404 4_4:+59251650 Msa0691220:CDS
TGGTTGTGATTGTGATTGTT+GGG 0.445141 4_4:-59247191 None:intergenic
GGGTTTGGGAATGGTTATGT+TGG 0.445378 4_4:-59247354 None:intergenic
GATGGGCAAATTATTAATAC+AGG 0.447610 4_4:-59249350 None:intergenic
GTATTCCGTCTTCTCTCAGC+TGG 0.449657 4_4:+59251934 Msa0691220:CDS
GACAAAAGCAAAGGCTCAAA+AGG 0.449714 4_4:-59247493 None:intergenic
CAGGATTGCAAAGCATTTCA+AGG 0.452568 4_4:+59252140 Msa0691220:intron
CACTCGCGTCTCGCTAAGAA+TGG 0.453882 4_4:-59249315 None:intergenic
GGCCCAGACATTGACTTAGT+TGG 0.454701 4_4:+59251171 Msa0691220:CDS
GACCATAGGGCATCTTATGA+TGG 0.456154 4_4:+59249883 Msa0691220:CDS
GTTCCAGTGTATATCTGATA+AGG 0.456164 4_4:-59249537 None:intergenic
GAGAAATTTATCATAAGAAA+AGG 0.456353 4_4:+59251594 Msa0691220:CDS
CTCAAGTTGAATGTTGCAAA+AGG 0.463260 4_4:+59250038 Msa0691220:CDS
GTTGTTCTTGGGTTTGGGAA+TGG 0.464124 4_4:-59247363 None:intergenic
GCTTTCGCCATCGCTTGAAA+GGG 0.464407 4_4:-59252890 None:intergenic
GAGAGCTTGCATTTAGCAAA+TGG 0.467611 4_4:+59253040 Msa0691220:CDS
TATGGAAGGACAATACAATA+GGG 0.467678 4_4:-59250130 None:intergenic
CCTTGCAGAGTCTATGGGCA+TGG 0.468152 4_4:+59253017 Msa0691220:CDS
TGGAATCGAAATCGCGGAGA+AGG 0.472990 4_4:-59247228 None:intergenic
ATACCTTGTCAAGCTACAAC+AGG 0.473011 4_4:+59250150 Msa0691220:CDS
CATCTTTAACTTGTTTGTCA+GGG 0.474207 4_4:-59251125 None:intergenic
ATCTTTGATTTAGTTGCACC+TGG 0.474759 4_4:+59249698 Msa0691220:CDS
ATCGCTTGAAAGGGTGCTGC+TGG 0.477053 4_4:-59252881 None:intergenic
TCTTGTGAGGGATTCCAGTT+GGG 0.478018 4_4:-59251859 None:intergenic
TGTTGTAGCTTGACAAGGTA+TGG 0.479020 4_4:-59250148 None:intergenic
CTTCAAGGAGACGAAGGTGG+TGG 0.480319 4_4:-59247291 None:intergenic
TCCCGCGTTCCAAGGGATCC+AGG 0.481425 4_4:-59249716 None:intergenic
GCTGCCATATTTGGTAAAGA+AGG 0.482240 4_4:+59249287 Msa0691220:CDS
GTGGGCAAGAGAGGATTTGG+GGG 0.483893 4_4:-59247272 None:intergenic
GGTTTGGGAATGGTTATGTT+GGG 0.485999 4_4:-59247353 None:intergenic
GGCACTGAATGTCAGGAAGC+TGG 0.490234 4_4:-59249973 None:intergenic
GATAACTGCCTTTGAATCAC+TGG 0.490666 4_4:-59252856 None:intergenic
CAGTAAGACCATATCGTCGC+AGG 0.505047 4_4:-59249637 None:intergenic
CTCTTCCTTTCATCAATCAA+AGG 0.505713 4_4:-59252979 None:intergenic
GCTGAAAAGGTGGGTCATCG+GGG 0.506715 4_4:-59247315 None:intergenic
AGAAGGGATTGTGAGGAAGA+TGG 0.508201 4_4:-59247211 None:intergenic
GGAAGTGCTCCCGCGTTCCA+AGG 0.508837 4_4:-59249724 None:intergenic
AGGTTATCTTTGTGAAGGTA+AGG 0.510107 4_4:-59250085 None:intergenic
TTTGACACTTACAGGATTCA+CGG 0.511765 4_4:+59249506 Msa0691220:CDS
CTGATATCAACTCGTGCTGG+TGG 0.512174 4_4:+59251790 Msa0691220:CDS
CCAGACATTGACTTAGTTGG+TGG 0.513306 4_4:+59251174 Msa0691220:CDS
AGTCTACAGTTTATAGATGC+AGG 0.513326 4_4:-59248306 None:intergenic
GGGAATGGTTATGTTGGGAA+AGG 0.513965 4_4:-59247348 None:intergenic
CATATATCATGGTGCAAACC+GGG 0.516674 4_4:+59249430 Msa0691220:CDS
GTTTGTCAGGGTCATCTTTG+GGG 0.517850 4_4:-59251113 None:intergenic
TGGGCAAGAGAGGATTTGGG+GGG 0.518058 4_4:-59247271 None:intergenic
AGCCTCCTTGCAGAGTCTAT+GGG 0.519253 4_4:+59253012 Msa0691220:CDS
ACGAAGGTGGTGGGCAAGAG+AGG 0.519445 4_4:-59247281 None:intergenic
ATTTATCATATATCAAATCC+CGG 0.519671 4_4:-59249448 None:intergenic
CTGCCTTTGAATCACTGGTC+GGG 0.523383 4_4:-59252851 None:intergenic
AAATCGCGGGGCTGAAAAGG+TGG 0.523444 4_4:-59247325 None:intergenic
CACAAAGATAACCTCGATGA+TGG 0.523793 4_4:+59250094 Msa0691220:CDS
ACCATAGGGCATCTTATGAT+GGG 0.525258 4_4:+59249884 Msa0691220:CDS
GTCTTGTGAGGGATTCCAGT+TGG 0.526276 4_4:-59251860 None:intergenic
CCCCATCATAAGATGCCCTA+TGG 0.526454 4_4:-59249885 None:intergenic
TCATGGACTAAAGTGCTGCT+TGG 0.526732 4_4:-59252916 None:intergenic
TTGAAAAGCTGTTGTTGTCA+TGG 0.528651 4_4:+59251262 Msa0691220:CDS
AGATAAAGAAGAAGAAGATG+AGG 0.529341 4_4:+59247396 Msa0691220:CDS
GGAATCGAAATCGCGGAGAA+GGG 0.530035 4_4:-59247227 None:intergenic
TTCAGCGTTGCCATATATCA+TGG 0.530042 4_4:+59249419 Msa0691220:CDS
AGAGACTGACGTAAATTAGT+TGG 0.531385 4_4:-59251648 None:intergenic
ATGGATGACAAGACAAATGC+AGG 0.531654 4_4:+59253153 Msa0691220:three_prime_UTR
TAAGGCCAAATAGCTCCATC+TGG 0.531866 4_4:-59250067 None:intergenic
CGCAGATTCAGAACATGACC+TGG 0.533240 4_4:-59252330 None:intergenic
ACCTGGATCCCTTGGAACGC+GGG 0.533333 4_4:+59249715 Msa0691220:CDS
AGGACAAAGGAAGAGACCAT+AGG 0.540752 4_4:+59249869 Msa0691220:CDS
TCTCAAACATTGCTGTCTCT+GGG 0.544151 4_4:+59252004 Msa0691220:CDS
CAACATTCAACTTGAGTGAG+AGG 0.544717 4_4:-59250031 None:intergenic
TTAATAAATATATGTTGAGA+AGG 0.545802 4_4:+59249849 Msa0691220:CDS
AGCAGCACCCTTTCAAGCGA+TGG 0.545842 4_4:+59252883 Msa0691220:CDS
CACCTGGATCCCTTGGAACG+CGG 0.548577 4_4:+59249714 Msa0691220:CDS
GAAGTGCTCCCGCGTTCCAA+GGG 0.549522 4_4:-59249723 None:intergenic
TTCCTGATATCAACTCGTGC+TGG 0.550502 4_4:+59251787 Msa0691220:CDS
TAACTAATTCAATTTGTACA+AGG 0.551528 4_4:-59253227 None:intergenic
AGGTTAAGCAGTGATTCTCA+TGG 0.552094 4_4:+59253134 Msa0691220:exon
GGACAAAGGAAGAGACCATA+GGG 0.552411 4_4:+59249870 Msa0691220:CDS
CTCACAAGACTTACAGGCTC+AGG 0.553116 4_4:+59251873 Msa0691220:CDS
TAAAGAAGAAGAAGATGAGG+AGG 0.553151 4_4:+59247399 Msa0691220:CDS
ATGCAGAATGAGAGTTTCCT+GGG 0.554920 4_4:+59251201 Msa0691220:CDS
TGATTATTGATGAGGCTCAT+CGG 0.558125 4_4:+59249564 Msa0691220:CDS
ATGCGATTCAACGATCTCAC+TGG 0.558770 4_4:-59252216 None:intergenic
GATTTGTACAAGAATAATAA+GGG 0.558836 4_4:+59248366 Msa0691220:CDS
ACTGCTTCTCAAGACTTGAT+GGG 0.560583 4_4:+59251619 Msa0691220:CDS
CTGAGCCTGTAAGTCTTGTG+AGG 0.564920 4_4:-59251872 None:intergenic
GTGAACCAGCTGAGAGAAGA+CGG 0.565741 4_4:-59251939 None:intergenic
CTTGCAGAGTCTATGGGCAT+GGG 0.568370 4_4:+59253018 Msa0691220:CDS
AGGATTGCAAAGCATTTCAA+GGG 0.569360 4_4:+59252141 Msa0691220:intron
CAAAGGAAGTTCACCATCAG+AGG 0.572213 4_4:-59247515 None:intergenic
CATTCTTAGCGAGACGCGAG+TGG 0.575924 4_4:+59249316 Msa0691220:CDS
GACCTCTGACCATGTTTAAG+GGG 0.575939 4_4:-59249764 None:intergenic
CCTTTCGATATGGACAGAAA+CGG 0.575975 4_4:+59251902 Msa0691220:CDS
CGACACGGTTTGCACTGACA+AGG 0.579908 4_4:-59251825 None:intergenic
AAATTCCTTTGATTGATGAA+AGG 0.579913 4_4:+59252974 Msa0691220:CDS
CATCGAGGTTATCTTTGTGA+AGG 0.579921 4_4:-59250090 None:intergenic
ATCATCCATTATTCAAAACT+GGG 0.580457 4_4:+59249370 Msa0691220:CDS
GATGTCGCTGCAAACTCTGA+AGG 0.580618 4_4:+59247144 Msa0691220:exon
CTGCTTGAGCATCAGAGAGT+GGG 0.580634 4_4:+59248327 Msa0691220:CDS
ACTCCCGACCAGTGATTCAA+AGG 0.586740 4_4:+59252848 Msa0691220:CDS
TTCAAGGAGACGAAGGTGGT+GGG 0.586973 4_4:-59247290 None:intergenic
ATAATTGACACCTGAACCAA+AGG 0.587680 4_4:-59247532 None:intergenic
GGGGTTCATCATAAAACTCA+CGG 0.588710 4_4:-59249745 None:intergenic
TGATATCAACTCGTGCTGGT+GGG 0.589176 4_4:+59251791 Msa0691220:CDS
AAGGACCTACCTTGTAGTTG+TGG 0.590735 4_4:+59250004 Msa0691220:CDS
ATTTATTAAGAACTGATACA+AGG 0.591701 4_4:-59249835 None:intergenic
ACTGCTTGAGCATCAGAGAG+TGG 0.591953 4_4:+59248326 Msa0691220:CDS
AGGGCATCTTATGATGGGGA+AGG 0.594070 4_4:+59249889 Msa0691220:CDS
GGTTTGGCTTAATCAGCTCA+AGG 0.594373 4_4:-59251092 None:intergenic
GTTCCTTATCAGATATACAC+TGG 0.596636 4_4:+59249534 Msa0691220:CDS
CACCAACTAAGTCAATGTCT+GGG 0.596790 4_4:-59251173 None:intergenic
AAGACTTACAGGCTCAGGAC+AGG 0.596921 4_4:+59251878 Msa0691220:CDS
ATATATGTTGAGAAGGACAA+AGG 0.598638 4_4:+59249856 Msa0691220:CDS
TAGCATCAGAGTCGGAAACC+AGG 0.598851 4_4:+59252312 Msa0691220:CDS
TATGATGAACCCCTTAAACA+TGG 0.599772 4_4:+59249755 Msa0691220:CDS
CAGACATTGACTTAGTTGGT+GGG 0.601601 4_4:+59251175 Msa0691220:CDS
AATCGCGGGGCTGAAAAGGT+GGG 0.602653 4_4:-59247324 None:intergenic
CATTCAGTGCCTTATAAACA+AGG 0.603623 4_4:+59249985 Msa0691220:CDS
AACATTCAACTTGAGTGAGA+GGG 0.605750 4_4:-59250030 None:intergenic
GTTCTGCATCACTTAGACCC+AGG 0.609049 4_4:-59251218 None:intergenic
CTGACGTAAATTAGTTGGAG+TGG 0.609659 4_4:-59251643 None:intergenic
ACTGCCTTTGAATCACTGGT+CGG 0.609913 4_4:-59252852 None:intergenic
GATATTGAATTTGAAGACGT+CGG 0.610834 4_4:+59252371 Msa0691220:CDS
AAGTTTGTTAGCATCAGAGT+CGG 0.613066 4_4:+59252304 Msa0691220:CDS
CCGTTTCTGTCCATATCGAA+AGG 0.613149 4_4:-59251902 None:intergenic
TGCGACGATATGGTCTTACT+GGG 0.616615 4_4:+59249639 Msa0691220:CDS
GTAGCTTGACAAGGTATGGA+AGG 0.618453 4_4:-59250144 None:intergenic
ATCGCGGAGAAGGGATTGTG+AGG 0.619365 4_4:-59247218 None:intergenic
ATTGGAAGCAAATGGAGTGG+AGG 0.621826 4_4:+59249469 Msa0691220:CDS
TGAGCCTGTAAGTCTTGTGA+GGG 0.622934 4_4:-59251871 None:intergenic
CCATGCCCATAGACTCTGCA+AGG 0.623496 4_4:-59253017 None:intergenic
TAACTTACATGTCATCTCCA+AGG 0.627540 4_4:-59248395 None:intergenic
GAACACTGTGATTATTGATG+AGG 0.628175 4_4:+59249556 Msa0691220:CDS
TGGACAGAAACGGCATGTTG+TGG 0.630144 4_4:+59251912 Msa0691220:CDS
TAACCTGTTGTAGCTTGACA+AGG 0.631990 4_4:-59250153 None:intergenic
TGCAAAAGGACTGTACCAGA+TGG 0.632875 4_4:+59250052 Msa0691220:CDS
CCATCAGAGGACAAAAGCAA+AGG 0.634049 4_4:-59247502 None:intergenic
AGAGGGCTACCACAACTACA+AGG 0.634818 4_4:-59250013 None:intergenic
CGGGGTCTTCAAGGAGACGA+AGG 0.644724 4_4:-59247297 None:intergenic
CTAAGTGATGCAGAACATTG+TGG 0.645219 4_4:+59251225 Msa0691220:CDS
GGTCTTCAAGGAGACGAAGG+TGG 0.649499 4_4:-59247294 None:intergenic
GTCATGTTCTGAATCTGCGA+GGG 0.651644 4_4:+59252334 Msa0691220:CDS
AGTAAGACCATATCGTCGCA+GGG 0.652621 4_4:-59249636 None:intergenic
GGGAGAGTGAATTCTCTAAG+TGG 0.652751 4_4:+59249390 Msa0691220:CDS
TAAATTGGAAGCAAATGGAG+TGG 0.653479 4_4:+59249466 Msa0691220:CDS
ATGTTGGGAAAGGAAATCGC+GGG 0.653617 4_4:-59247338 None:intergenic
ATGATCAAATTGAATCTGAG+AGG 0.657250 4_4:-59247464 None:intergenic
GGATTGCAAAGCATTTCAAG+GGG 0.660247 4_4:+59252142 Msa0691220:intron
CCATAGGGCATCTTATGATG+GGG 0.660451 4_4:+59249885 Msa0691220:CDS
ATGGAAGGACAATACAATAG+GGG 0.664280 4_4:-59250129 None:intergenic
GGCTACCACAACTACAAGGT+AGG 0.664330 4_4:-59250009 None:intergenic
GGTCATGTTCTGAATCTGCG+AGG 0.667444 4_4:+59252333 Msa0691220:CDS
AACCCCTTAAACATGGTCAG+AGG 0.671680 4_4:+59249762 Msa0691220:CDS
TGGGATCAAATATTACGACA+CGG 0.688453 4_4:-59251840 None:intergenic
TATGTTGGGAAAGGAAATCG+CGG 0.688500 4_4:-59247339 None:intergenic
TTGTACAAGAATAATAAGGG+AGG 0.688626 4_4:+59248369 Msa0691220:CDS
GGAAGTTGGAATCGAAATCG+CGG 0.691205 4_4:-59247234 None:intergenic
ATGGGCAAATTATTAATACA+GGG 0.702610 4_4:-59249349 None:intergenic
TGCCCATAGACTCTGCAAGG+AGG 0.715941 4_4:-59253014 None:intergenic
TGTTGGGAAAGGAAATCGCG+GGG 0.716055 4_4:-59247337 None:intergenic
ATGAATCACATCCATCATCG+AGG 0.748270 4_4:-59250105 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CCAAAAATTTATTATTTATA+GGG - chr4_4:59249084-59249103 None:intergenic 10.0%
!! TCCAAAAATTTATTATTTAT+AGG - chr4_4:59249085-59249104 None:intergenic 10.0%
!!! TTTTATTTTTTTATGAGATT+TGG + chr4_4:59249156-59249175 Msa0691220:intron 10.0%
!! AAAAAAGAAATTGTTTATTT+AGG + chr4_4:59250655-59250674 Msa0691220:intron 10.0%
!!! CAATTTTGAAAAATATTTTT+AGG - chr4_4:59250896-59250915 None:intergenic 10.0%
!!! ATAAAGGAACTTTTTTTTTT+TGG - chr4_4:59248055-59248074 None:intergenic 15.0%
!! TGTATATTCTATACATATTA+TGG - chr4_4:59248496-59248515 None:intergenic 15.0%
!!! TAATGTTTTATATAAGATAG+AGG - chr4_4:59248607-59248626 None:intergenic 15.0%
!! TCTTATATAAAACATTATGA+TGG + chr4_4:59248610-59248629 Msa0691220:intron 15.0%
!!! ATTTGTTAATTTAATGACAA+AGG - chr4_4:59248976-59248995 None:intergenic 15.0%
!!! CCCTATAAATAATAAATTTT+TGG + chr4_4:59249081-59249100 Msa0691220:intron 15.0%
!! TTAATAAATATATGTTGAGA+AGG + chr4_4:59249849-59249868 Msa0691220:CDS 15.0%
!! TTTAAAAACAGTAATCAAAT+AGG - chr4_4:59250616-59250635 None:intergenic 15.0%
!!! ACAATTTCTTTTTTTAAGAA+TGG - chr4_4:59250649-59250668 None:intergenic 15.0%
!!! TTATTTTTTTTGCAAAAACA+AGG - chr4_4:59250717-59250736 None:intergenic 15.0%
!!! AATTTATCTACTGTTAATTT+TGG + chr4_4:59252739-59252758 Msa0691220:intron 15.0%
!!! ATTTATCTACTGTTAATTTT+GGG + chr4_4:59252740-59252759 Msa0691220:intron 15.0%
!! AAAATAAAAGTTATGATGTT+TGG - chr4_4:59253268-59253287 None:intergenic 15.0%
!! GAGTTAATTCAAAAAAGTTT+AGG - chr4_4:59247029-59247048 None:intergenic 20.0%
!! AGAATAAAATGCAATAATTG+TGG - chr4_4:59247579-59247598 None:intergenic 20.0%
!!! ATTTTATATGAATGCAATCA+TGG + chr4_4:59247601-59247620 Msa0691220:intron 20.0%
!! CAAATTCATAAACATGATAA+AGG - chr4_4:59248071-59248090 None:intergenic 20.0%
!!! TGATTTGTACAAGAATAATA+AGG + chr4_4:59248365-59248384 Msa0691220:CDS 20.0%
!! GATTTGTACAAGAATAATAA+GGG + chr4_4:59248366-59248385 Msa0691220:CDS 20.0%
!! AATATACAGATATATTGATG+TGG + chr4_4:59248508-59248527 Msa0691220:intron 20.0%
!! ATATACAGATATATTGATGT+GGG + chr4_4:59248509-59248528 Msa0691220:intron 20.0%
!! CTGACATAATATTTACTATT+GGG + chr4_4:59248668-59248687 Msa0691220:intron 20.0%
!! GATAAAAAAGAAAACTTTAG+CGG - chr4_4:59248787-59248806 None:intergenic 20.0%
!! ATTTATCATATATCAAATCC+CGG - chr4_4:59249451-59249470 None:intergenic 20.0%
!! GGATTTGATATATGATAAAT+TGG + chr4_4:59249451-59249470 Msa0691220:CDS 20.0%
!!! TAAGATCTTATTTTGCATTA+CGG - chr4_4:59249666-59249685 None:intergenic 20.0%
!! ATTTATTAAGAACTGATACA+AGG - chr4_4:59249838-59249857 None:intergenic 20.0%
!! TATTCAATTTAATAAGTGTG+TGG + chr4_4:59250449-59250468 Msa0691220:intron 20.0%
!! AATTAAAATTAGATCAACCT+AGG + chr4_4:59250755-59250774 Msa0691220:intron 20.0%
!! ATTAAAATTAGATCAACCTA+GGG + chr4_4:59250756-59250775 Msa0691220:intron 20.0%
!! AAAAACTTCAAGCAATATTA+TGG - chr4_4:59251404-59251423 None:intergenic 20.0%
!! GAGAAATTTATCATAAGAAA+AGG + chr4_4:59251594-59251613 Msa0691220:CDS 20.0%
!!! TAATTGAATAAGCATTTTTC+TGG + chr4_4:59251722-59251741 Msa0691220:intron 20.0%
!!! GGTAAAACAAATTGTTTTAT+TGG + chr4_4:59252585-59252604 Msa0691220:intron 20.0%
!!! CAAAACAAAAGTTGATTAAA+TGG - chr4_4:59252783-59252802 None:intergenic 20.0%
!!! AACTTTTGTTTTGTATCTTT+AGG + chr4_4:59252790-59252809 Msa0691220:intron 20.0%
!!! AAAGGAATTTTCTGTTTTTT+AGG - chr4_4:59252964-59252983 None:intergenic 20.0%
!! AAGAAAAAGAAAAAGCTTAA+AGG + chr4_4:59253114-59253133 Msa0691220:CDS 20.0%
!!! TTACACAATTTTCTATTGTT+TGG - chr4_4:59253179-59253198 None:intergenic 20.0%
!! TAACTAATTCAATTTGTACA+AGG - chr4_4:59253230-59253249 None:intergenic 20.0%
!!! TAGTTTTACTTGTTGTTCTT+GGG - chr4_4:59247377-59247396 None:intergenic 25.0%
!! AATTTCACACACTTTATTTC+TGG - chr4_4:59247430-59247449 None:intergenic 25.0%
! TTCTGTAATTATTAACAGTG+TGG - chr4_4:59247709-59247728 None:intergenic 25.0%
! GTCTATTGTTTACTTCATTA+AGG + chr4_4:59247908-59247927 Msa0691220:intron 25.0%
! AAAATAGGAAAAACAGAAGA+GGG - chr4_4:59248449-59248468 None:intergenic 25.0%
! AAAAATAGGAAAAACAGAAG+AGG - chr4_4:59248450-59248469 None:intergenic 25.0%
!!! ACATTATGATGGAATTTTCT+TGG + chr4_4:59248621-59248640 Msa0691220:intron 25.0%
! GCTGACATAATATTTACTAT+TGG + chr4_4:59248667-59248686 Msa0691220:intron 25.0%
! GATATGTATTGTACTCTAAT+AGG - chr4_4:59248730-59248749 None:intergenic 25.0%
! ATAGTAGGATACAAGAATTT+AGG + chr4_4:59248849-59248868 Msa0691220:intron 25.0%
! TAAAGAAATTTAGTAGTGTG+CGG + chr4_4:59248924-59248943 Msa0691220:intron 25.0%
! TTTGTGTGTATATTATTTGC+TGG + chr4_4:59249118-59249137 Msa0691220:intron 25.0%
!! TGCATATTGAAATTTGAAAC+AGG + chr4_4:59249228-59249247 Msa0691220:intron 25.0%
!! GCATATTGAAATTTGAAACA+GGG + chr4_4:59249229-59249248 Msa0691220:intron 25.0%
!! CATATTGAAATTTGAAACAG+GGG + chr4_4:59249230-59249249 Msa0691220:intron 25.0%
! AAGAAATGCTATTGTTTGAA+TGG - chr4_4:59249267-59249286 None:intergenic 25.0%
! ATGGGCAAATTATTAATACA+GGG - chr4_4:59249352-59249371 None:intergenic 25.0%
!!! AGTTTTGAATAATGGATGAT+GGG - chr4_4:59249370-59249389 None:intergenic 25.0%
! ATCATCCATTATTCAAAACT+GGG + chr4_4:59249370-59249389 Msa0691220:CDS 25.0%
! TATGATAAATTGGAAGCAAA+TGG + chr4_4:59249461-59249480 Msa0691220:CDS 25.0%
!! GTTTTCTCTTATTAGCAATT+TGG - chr4_4:59249811-59249830 None:intergenic 25.0%
! ATTTGCAAAAACGCATTTAT+AGG + chr4_4:59249942-59249961 Msa0691220:CDS 25.0%
! AGTTTCTATCTTGTAATTGT+AGG + chr4_4:59250303-59250322 Msa0691220:intron 25.0%
!!! ATGTTTGTTATCTGTTAAGA+TGG + chr4_4:59250401-59250420 Msa0691220:intron 25.0%
! TTAGGACAAAGCAAAAAATA+TGG - chr4_4:59250878-59250897 None:intergenic 25.0%
!!! TTTTGTTTAGCTATTCTGTA+AGG + chr4_4:59251307-59251326 Msa0691220:CDS 25.0%
!!! ATCATGTTTGATACTTTTTC+TGG + chr4_4:59251352-59251371 Msa0691220:intron 25.0%
!!! TCATGTTTGATACTTTTTCT+GGG + chr4_4:59251353-59251372 Msa0691220:intron 25.0%
!!! ATGGAAAAACGATATTTTGA+AGG + chr4_4:59252030-59252049 Msa0691220:CDS 25.0%
! AAATTAATCAATTTCCATGC+AGG + chr4_4:59252121-59252140 Msa0691220:intron 25.0%
! ATTTATGAGGAAAGAAAACA+AGG - chr4_4:59252433-59252452 None:intergenic 25.0%
! TATTCAGTAAGGAAACAATT+AGG + chr4_4:59252454-59252473 Msa0691220:intron 25.0%
! AAGCTGTTATATATCTTAGA+AGG - chr4_4:59252506-59252525 None:intergenic 25.0%
!! GATATATAACAGCTTTTTAC+TGG + chr4_4:59252511-59252530 Msa0691220:intron 25.0%
!!! TTTACTGGAACATTTTTTTG+AGG + chr4_4:59252526-59252545 Msa0691220:intron 25.0%
! GGTGAATGAAAATATGAATT+TGG - chr4_4:59252617-59252636 None:intergenic 25.0%
!! AATATTCTTTTGTCATGGTA+TGG - chr4_4:59252638-59252657 None:intergenic 25.0%
! ATACCATGACAAAAGAATAT+TGG + chr4_4:59252637-59252656 Msa0691220:intron 25.0%
!! TTACCAATATTCTTTTGTCA+TGG - chr4_4:59252643-59252662 None:intergenic 25.0%
!! GACAAAAGAATATTGGTAAT+TGG + chr4_4:59252644-59252663 Msa0691220:intron 25.0%
! AAATTCCTTTGATTGATGAA+AGG + chr4_4:59252974-59252993 Msa0691220:CDS 25.0%
!!! TCGTAATGTTTCGTTTTTTT+AGG + chr4_4:59253295-59253314 Msa0691220:three_prime_UTR 25.0%
!!! CTAGTTTTACTTGTTGTTCT+TGG - chr4_4:59247378-59247397 None:intergenic 30.0%
AGATAAAGAAGAAGAAGATG+AGG + chr4_4:59247396-59247415 Msa0691220:CDS 30.0%
ATGATCAAATTGAATCTGAG+AGG - chr4_4:59247467-59247486 None:intergenic 30.0%
CAGATTCAATTTGATCATAC+TGG + chr4_4:59247469-59247488 Msa0691220:CDS 30.0%
ACACATAAATTGTTAGCACA+TGG - chr4_4:59247951-59247970 None:intergenic 30.0%
TGTGCTAACAATTTATGTGT+TGG + chr4_4:59247951-59247970 Msa0691220:intron 30.0%
GTGCTAACAATTTATGTGTT+GGG + chr4_4:59247952-59247971 Msa0691220:intron 30.0%
! TATATTCTGAGAACTGTTTC+AGG + chr4_4:59248281-59248300 Msa0691220:intron 30.0%
TTGTACAAGAATAATAAGGG+AGG + chr4_4:59248369-59248388 Msa0691220:CDS 30.0%
AAATAGGAAAAACAGAAGAG+GGG - chr4_4:59248448-59248467 None:intergenic 30.0%
CATATTATGGCGTAAAAAAC+AGG - chr4_4:59248483-59248502 None:intergenic 30.0%
AAAGCAATGTGATTGAGATT+TGG - chr4_4:59248565-59248584 None:intergenic 30.0%
GTAAATATTATGTCAGCATG+AGG - chr4_4:59248664-59248683 None:intergenic 30.0%
GTCAAAATCAATCATCAAGT+GGG - chr4_4:59248814-59248833 None:intergenic 30.0%
AGTCAAAATCAATCATCAAG+TGG - chr4_4:59248815-59248834 None:intergenic 30.0%
!! ACTTGATGATTGATTTTGAC+TGG + chr4_4:59248814-59248833 Msa0691220:intron 30.0%
!!! ATTTTGACTGGAAATGCTTT+AGG + chr4_4:59248826-59248845 Msa0691220:intron 30.0%
! GATTTAAAATTTCGCTTCTC+AGG + chr4_4:59248946-59248965 Msa0691220:intron 30.0%
GATGGGCAAATTATTAATAC+AGG - chr4_4:59249353-59249372 None:intergenic 30.0%
!!! CAGTTTTGAATAATGGATGA+TGG - chr4_4:59249371-59249390 None:intergenic 30.0%
CATCATCCATTATTCAAAAC+TGG + chr4_4:59249369-59249388 Msa0691220:CDS 30.0%
ATATATGTTGAGAAGGACAA+AGG + chr4_4:59249856-59249875 Msa0691220:CDS 30.0%
TATGGAAGGACAATACAATA+GGG - chr4_4:59250133-59250152 None:intergenic 30.0%
GACACTATATTCAAAAAGAG+AGG - chr4_4:59250203-59250222 None:intergenic 30.0%
ATTCAGATCAGTAGTTGTAA+CGG + chr4_4:59250341-59250360 Msa0691220:intron 30.0%
TGTTAAGATGGAAGTAGATA+TGG + chr4_4:59250413-59250432 Msa0691220:intron 30.0%
AATGAAAACAAAACAACCCT+AGG - chr4_4:59250775-59250794 None:intergenic 30.0%
AAGCAAAAAATATGGAGTGT+CGG - chr4_4:59250870-59250889 None:intergenic 30.0%
!! CATCTTTAACTTGTTTGTCA+GGG - chr4_4:59251128-59251147 None:intergenic 30.0%
TATTCTGTAAGGTGAATAGT+TGG + chr4_4:59251318-59251337 Msa0691220:intron 30.0%
! AAGACCATAGTTGTATCTTT+TGG + chr4_4:59251482-59251501 Msa0691220:intron 30.0%
AAGACCAAAAGATACAACTA+TGG - chr4_4:59251489-59251508 None:intergenic 30.0%
AGTTAAACAGCAGGAAAATA+CGG - chr4_4:59251541-59251560 None:intergenic 30.0%
TTGAGATATACTTGTTTGCT+TGG - chr4_4:59251696-59251715 None:intergenic 30.0%
!! CTGGTTCAATTTGTTGTTAT+CGG + chr4_4:59251741-59251760 Msa0691220:intron 30.0%
!! TGGTTCAATTTGTTGTTATC+GGG + chr4_4:59251742-59251761 Msa0691220:intron 30.0%
! ACATCAAAATACACAGGTTT+TGG - chr4_4:59252066-59252085 None:intergenic 30.0%
CATGAGACGAATAAAAAAGA+CGG + chr4_4:59252236-59252255 Msa0691220:CDS 30.0%
ATGAGACGAATAAAAAAGAC+GGG + chr4_4:59252237-59252256 Msa0691220:CDS 30.0%
ACGTCTTCAAATTCAATATC+TGG - chr4_4:59252371-59252390 None:intergenic 30.0%
GATATTGAATTTGAAGACGT+CGG + chr4_4:59252371-59252390 Msa0691220:CDS 30.0%
GGAATTTCAGTATGTGAAAT+AGG - chr4_4:59252412-59252431 None:intergenic 30.0%
CCTTACTGAATAGATTTATG+AGG - chr4_4:59252446-59252465 None:intergenic 30.0%
CCTCATAAATCTATTCAGTA+AGG + chr4_4:59252443-59252462 Msa0691220:intron 30.0%
!! TTAATTTTGGGAAATGACAG+CGG + chr4_4:59252752-59252771 Msa0691220:intron 30.0%
!! ATTCTGGTTTCTTCATTTCA+TGG - chr4_4:59252936-59252955 None:intergenic 30.0%
!!! TGTTTTTTAGGTACACATTC+TGG - chr4_4:59252952-59252971 None:intergenic 30.0%
!!! CTCGTTGATTTTGCATTTAG+CGG + chr4_4:59247046-59247065 Msa0691220:five_prime_UTR 35.0%
TGGTTGTGATTGTGATTGTT+GGG - chr4_4:59247194-59247213 None:intergenic 35.0%
ATGGTTGTGATTGTGATTGT+TGG - chr4_4:59247195-59247214 None:intergenic 35.0%
!! TTTTCTGTTGATAGGGAAGT+TGG - chr4_4:59247251-59247270 None:intergenic 35.0%
!! TACTTGTTGTTCTTGGGTTT+GGG - chr4_4:59247371-59247390 None:intergenic 35.0%
!! TTACTTGTTGTTCTTGGGTT+TGG - chr4_4:59247372-59247391 None:intergenic 35.0%
TAAAGAAGAAGAAGATGAGG+AGG + chr4_4:59247399-59247418 Msa0691220:CDS 35.0%
ATAATTGACACCTGAACCAA+AGG - chr4_4:59247535-59247554 None:intergenic 35.0%
TCTCAAGTTAAGTCATTGAC+TGG + chr4_4:59247646-59247665 Msa0691220:intron 35.0%
GTTTACTTCATTAAGGTCTC+AGG + chr4_4:59247915-59247934 Msa0691220:intron 35.0%
CATAAATTGTTAGCACATGG+AGG - chr4_4:59247948-59247967 None:intergenic 35.0%
AGTTCAAAGACCTACTAATC+CGG - chr4_4:59248026-59248045 None:intergenic 35.0%
AGTCTACAGTTTATAGATGC+AGG - chr4_4:59248309-59248328 None:intergenic 35.0%
TAACTTACATGTCATCTCCA+AGG - chr4_4:59248398-59248417 None:intergenic 35.0%
CAGGACGATGCTAAAAAAAT+AGG - chr4_4:59248464-59248483 None:intergenic 35.0%
TACTCTAATAGGATCTACCA+TGG - chr4_4:59248719-59248738 None:intergenic 35.0%
! GAAAGTGCAATATTTCAGAG+AGG - chr4_4:59248754-59248773 None:intergenic 35.0%
!! TGGAAATGCTTTAGGATAGT+AGG + chr4_4:59248834-59248853 Msa0691220:intron 35.0%
TAAAATTTCGCTTCTCAGGT+AGG + chr4_4:59248950-59248969 Msa0691220:intron 35.0%
! GAAGACATACACTGAGATTT+TGG - chr4_4:59249041-59249060 None:intergenic 35.0%
! GGTTCTTTTTATCTCAACTC+TGG + chr4_4:59249177-59249196 Msa0691220:intron 35.0%
GTCTCCTTCTTTACCAAATA+TGG - chr4_4:59249294-59249313 None:intergenic 35.0%
!!! ACTCTCCCAGTTTTGAATAA+TGG - chr4_4:59249378-59249397 None:intergenic 35.0%
TAAATTGGAAGCAAATGGAG+TGG + chr4_4:59249466-59249485 Msa0691220:CDS 35.0%
!! TTACCAGTTTTGACACTTAC+AGG + chr4_4:59249498-59249517 Msa0691220:CDS 35.0%
AATCCTGTAAGTGTCAAAAC+TGG - chr4_4:59249504-59249523 None:intergenic 35.0%
TTTGACACTTACAGGATTCA+CGG + chr4_4:59249506-59249525 Msa0691220:CDS 35.0%
GTTCCTTATCAGATATACAC+TGG + chr4_4:59249534-59249553 Msa0691220:CDS 35.0%
GTTCCAGTGTATATCTGATA+AGG - chr4_4:59249540-59249559 None:intergenic 35.0%
GAACACTGTGATTATTGATG+AGG + chr4_4:59249556-59249575 Msa0691220:CDS 35.0%
TGATTATTGATGAGGCTCAT+CGG + chr4_4:59249564-59249583 Msa0691220:CDS 35.0%
! ATCTTTGATTTAGTTGCACC+TGG + chr4_4:59249698-59249717 Msa0691220:CDS 35.0%
TATGATGAACCCCTTAAACA+TGG + chr4_4:59249755-59249774 Msa0691220:CDS 35.0%
GCAATTTGGACAAATCTATC+AGG - chr4_4:59249797-59249816 None:intergenic 35.0%
!! TTTATAAGGCACTGAATGTC+AGG - chr4_4:59249983-59250002 None:intergenic 35.0%
CATTCAGTGCCTTATAAACA+AGG + chr4_4:59249985-59250004 Msa0691220:CDS 35.0%
! AAGGTAGGTCCTTGTTTATA+AGG - chr4_4:59249997-59250016 None:intergenic 35.0%
AACATTCAACTTGAGTGAGA+GGG - chr4_4:59250033-59250052 None:intergenic 35.0%
!! CTCAAGTTGAATGTTGCAAA+AGG + chr4_4:59250038-59250057 Msa0691220:CDS 35.0%
AGGTTATCTTTGTGAAGGTA+AGG - chr4_4:59250088-59250107 None:intergenic 35.0%
ATGGAAGGACAATACAATAG+GGG - chr4_4:59250132-59250151 None:intergenic 35.0%
GTATGGAAGGACAATACAAT+AGG - chr4_4:59250134-59250153 None:intergenic 35.0%
!! AGCTAATTTGTTCATAGCAC+TGG + chr4_4:59250242-59250261 Msa0691220:intron 35.0%
TTCAGATCAGTAGTTGTAAC+GGG + chr4_4:59250342-59250361 Msa0691220:intron 35.0%
AGTAGATATGGACAAGGATA+TGG + chr4_4:59250425-59250444 Msa0691220:intron 35.0%
! AGCAAAAAATATGGAGTGTC+GGG - chr4_4:59250869-59250888 None:intergenic 35.0%
AAGACAATCAAATCAAGCCA+TGG + chr4_4:59250930-59250949 Msa0691220:intron 35.0%
AGACAATCAAATCAAGCCAT+GGG + chr4_4:59250931-59250950 Msa0691220:intron 35.0%
!! GCATCTTTAACTTGTTTGTC+AGG - chr4_4:59251129-59251148 None:intergenic 35.0%
TTGAAAAGCTGTTGTTGTCA+TGG + chr4_4:59251262-59251281 Msa0691220:CDS 35.0%
! TTGTTGTCATGGTTTTCACA+TGG + chr4_4:59251273-59251292 Msa0691220:CDS 35.0%
TTCTGGGTGTCTTATAAGAT+AGG + chr4_4:59251369-59251388 Msa0691220:intron 35.0%
AGCAATAGATAAGAGGAACA+AGG - chr4_4:59251460-59251479 None:intergenic 35.0%
GTCTTGAAGCAATAGATAAG+AGG - chr4_4:59251467-59251486 None:intergenic 35.0%
!!! AGTTGTATCTTTTGGTCTTG+TGG + chr4_4:59251490-59251509 Msa0691220:intron 35.0%
! TAACTTGAGCTACTCTTTTC+AGG + chr4_4:59251556-59251575 Msa0691220:intron 35.0%
AGAGACTGACGTAAATTAGT+TGG - chr4_4:59251651-59251670 None:intergenic 35.0%
AACTAATTTACGTCAGTCTC+TGG + chr4_4:59251650-59251669 Msa0691220:CDS 35.0%
!!! GGGCTCTTGTTTCTTATTTT+AGG + chr4_4:59251762-59251781 Msa0691220:intron 35.0%
TGGGATCAAATATTACGACA+CGG - chr4_4:59251843-59251862 None:intergenic 35.0%
TCGTAATATTTGATCCCAAC+TGG + chr4_4:59251845-59251864 Msa0691220:CDS 35.0%
! AGAACTAGTTTATTCTCGTC+AGG + chr4_4:59251966-59251985 Msa0691220:CDS 35.0%
! AGGATTGCAAAGCATTTCAA+GGG + chr4_4:59252141-59252160 Msa0691220:intron 35.0%
!! AAGTTTGTTAGCATCAGAGT+CGG + chr4_4:59252304-59252323 Msa0691220:CDS 35.0%
!!! ACATTTTTTTGAGGCGATCA+TGG + chr4_4:59252535-59252554 Msa0691220:intron 35.0%
CTACATATGCACAAAAATGC+TGG + chr4_4:59252564-59252583 Msa0691220:intron 35.0%
GAATCTTTGCTTTGTAACTG+TGG + chr4_4:59252688-59252707 Msa0691220:intron 35.0%
TAACTGTGGCCATTGAAATT+AGG + chr4_4:59252702-59252721 Msa0691220:intron 35.0%
AACTGTGGCCATTGAAATTA+GGG + chr4_4:59252703-59252722 Msa0691220:intron 35.0%
GCTTTACTCCCTAATTTCAA+TGG - chr4_4:59252714-59252733 None:intergenic 35.0%
CTCTTCCTTTCATCAATCAA+AGG - chr4_4:59252982-59253001 None:intergenic 35.0%
! TTTTTCTCTCTCTACTGAAG+TGG - chr4_4:59253076-59253095 None:intergenic 35.0%
TATGTTGGGAAAGGAAATCG+CGG - chr4_4:59247342-59247361 None:intergenic 40.0%
GGTTTGGGAATGGTTATGTT+GGG - chr4_4:59247356-59247375 None:intergenic 40.0%
GACAAAAGCAAAGGCTCAAA+AGG - chr4_4:59247496-59247515 None:intergenic 40.0%
ACCAAAAAGATCACCCTGAT+TGG + chr4_4:59247772-59247791 Msa0691220:intron 40.0%
! TCCAATCAGGGTGATCTTTT+TGG - chr4_4:59247776-59247795 None:intergenic 40.0%
ACGTGTCTATTGTCCAATCA+GGG - chr4_4:59247788-59247807 None:intergenic 40.0%
TTGAGTAGATTTCCCAATGC+CGG + chr4_4:59247836-59247855 Msa0691220:intron 40.0%
TATGATGTGCTAGTTGAACC+CGG - chr4_4:59247858-59247877 None:intergenic 40.0%
TTCAAAGACCTACTAATCCG+GGG - chr4_4:59248024-59248043 None:intergenic 40.0%
GTTCAAAGACCTACTAATCC+GGG - chr4_4:59248025-59248044 None:intergenic 40.0%
!! AATAATAAGGGAGGCATCCT+TGG + chr4_4:59248378-59248397 Msa0691220:CDS 40.0%
TGTCAGCATGAGGTAGATAA+AGG - chr4_4:59248654-59248673 None:intergenic 40.0%
! GAAATTTGAAACAGGGGTCT+TGG + chr4_4:59249236-59249255 Msa0691220:intron 40.0%
GCATTTCTTGCTGCCATATT+TGG + chr4_4:59249278-59249297 Msa0691220:CDS 40.0%
GCTGCCATATTTGGTAAAGA+AGG + chr4_4:59249287-59249306 Msa0691220:CDS 40.0%
TTCAGCGTTGCCATATATCA+TGG + chr4_4:59249419-59249438 Msa0691220:CDS 40.0%
CCATATATCATGGTGCAAAC+CGG + chr4_4:59249429-59249448 Msa0691220:CDS 40.0%
CATATATCATGGTGCAAACC+GGG + chr4_4:59249430-59249449 Msa0691220:CDS 40.0%
ATTAAAACCCTGCGACGATA+TGG + chr4_4:59249629-59249648 Msa0691220:CDS 40.0%
GGGGTTCATCATAAAACTCA+CGG - chr4_4:59249748-59249767 None:intergenic 40.0%
TGACCTCTGACCATGTTTAA+GGG - chr4_4:59249768-59249787 None:intergenic 40.0%
TTGACCTCTGACCATGTTTA+AGG - chr4_4:59249769-59249788 None:intergenic 40.0%
! ACCATAGGGCATCTTATGAT+GGG + chr4_4:59249884-59249903 Msa0691220:CDS 40.0%
CAACATTCAACTTGAGTGAG+AGG - chr4_4:59250034-59250053 None:intergenic 40.0%
CATCGAGGTTATCTTTGTGA+AGG - chr4_4:59250093-59250112 None:intergenic 40.0%
CACAAAGATAACCTCGATGA+TGG + chr4_4:59250094-59250113 Msa0691220:CDS 40.0%
ATGAATCACATCCATCATCG+AGG - chr4_4:59250108-59250127 None:intergenic 40.0%
TGTTGTAGCTTGACAAGGTA+TGG - chr4_4:59250151-59250170 None:intergenic 40.0%
ATACCTTGTCAAGCTACAAC+AGG + chr4_4:59250150-59250169 Msa0691220:CDS 40.0%
TAACCTGTTGTAGCTTGACA+AGG - chr4_4:59250156-59250175 None:intergenic 40.0%
! TAGCACTGGACATCTATTGT+AGG + chr4_4:59250256-59250275 Msa0691220:intron 40.0%
TCAGATCAGTAGTTGTAACG+GGG + chr4_4:59250343-59250362 Msa0691220:intron 40.0%
AGGCGTGAATTATCTCAAGA+AGG + chr4_4:59250377-59250396 Msa0691220:intron 40.0%
GATGGAAGTAGATATGGACA+AGG + chr4_4:59250419-59250438 Msa0691220:intron 40.0%
TTAGTAACCACACTGATGGA+GGG + chr4_4:59250549-59250568 Msa0691220:intron 40.0%
!! AAAAAATATGGAGTGTCGGG+TGG - chr4_4:59250866-59250885 None:intergenic 40.0%
GACAATCAAATCAAGCCATG+GGG + chr4_4:59250932-59250951 Msa0691220:intron 40.0%
TGTTTGTCAGGGTCATCTTT+GGG - chr4_4:59251117-59251136 None:intergenic 40.0%
TTGTTTGTCAGGGTCATCTT+TGG - chr4_4:59251118-59251137 None:intergenic 40.0%
CACCAACTAAGTCAATGTCT+GGG - chr4_4:59251176-59251195 None:intergenic 40.0%
!! CAGACATTGACTTAGTTGGT+GGG + chr4_4:59251175-59251194 Msa0691220:CDS 40.0%
ATGCAGAATGAGAGTTTCCT+GGG + chr4_4:59251201-59251220 Msa0691220:CDS 40.0%
CTAAGTGATGCAGAACATTG+TGG + chr4_4:59251225-59251244 Msa0691220:CDS 40.0%
AGTAGCTCAAGTTAAACAGC+AGG - chr4_4:59251550-59251569 None:intergenic 40.0%
TACTGCTTCTCAAGACTTGA+TGG + chr4_4:59251618-59251637 Msa0691220:CDS 40.0%
ACTGCTTCTCAAGACTTGAT+GGG + chr4_4:59251619-59251638 Msa0691220:CDS 40.0%
CTGACGTAAATTAGTTGGAG+TGG - chr4_4:59251646-59251665 None:intergenic 40.0%
CCTTTCGATATGGACAGAAA+CGG + chr4_4:59251902-59251921 Msa0691220:CDS 40.0%
TCTCAAACATTGCTGTCTCT+GGG + chr4_4:59252004-59252023 Msa0691220:CDS 40.0%
!!! ACGATATTTTGAAGGTGTCC+AGG + chr4_4:59252038-59252057 Msa0691220:CDS 40.0%
GCTGCAACATCAAAATACAC+AGG - chr4_4:59252072-59252091 None:intergenic 40.0%
AAATGCTTTGCAATCCTGCA+TGG - chr4_4:59252138-59252157 None:intergenic 40.0%
! CAGGATTGCAAAGCATTTCA+AGG + chr4_4:59252140-59252159 Msa0691220:intron 40.0%
! GGATTGCAAAGCATTTCAAG+GGG + chr4_4:59252142-59252161 Msa0691220:intron 40.0%
GATAACTGCCTTTGAATCAC+TGG - chr4_4:59252859-59252878 None:intergenic 40.0%
GAGAGCTTGCATTTAGCAAA+TGG + chr4_4:59253040-59253059 Msa0691220:CDS 40.0%
AGGTTAAGCAGTGATTCTCA+TGG + chr4_4:59253134-59253153 Msa0691220:exon 40.0%
ATGGATGACAAGACAAATGC+AGG + chr4_4:59253153-59253172 Msa0691220:three_prime_UTR 40.0%
AGAAGGGATTGTGAGGAAGA+TGG - chr4_4:59247214-59247233 None:intergenic 45.0%
GGAAGTTGGAATCGAAATCG+CGG - chr4_4:59247237-59247256 None:intergenic 45.0%
! TGGGGGGTTTTCTGTTGATA+GGG - chr4_4:59247258-59247277 None:intergenic 45.0%
! TTGGGGGGTTTTCTGTTGAT+AGG - chr4_4:59247259-59247278 None:intergenic 45.0%
ATGTTGGGAAAGGAAATCGC+GGG - chr4_4:59247341-59247360 None:intergenic 45.0%
GGGAATGGTTATGTTGGGAA+AGG - chr4_4:59247351-59247370 None:intergenic 45.0%
GGGTTTGGGAATGGTTATGT+TGG - chr4_4:59247357-59247376 None:intergenic 45.0%
GTTGTTCTTGGGTTTGGGAA+TGG - chr4_4:59247366-59247385 None:intergenic 45.0%
CCATCAGAGGACAAAAGCAA+AGG - chr4_4:59247505-59247524 None:intergenic 45.0%
!! CCTTTGCTTTTGTCCTCTGA+TGG + chr4_4:59247502-59247521 Msa0691220:CDS 45.0%
CAAAGGAAGTTCACCATCAG+AGG - chr4_4:59247518-59247537 None:intergenic 45.0%
! CTCTGATGGTGAACTTCCTT+TGG + chr4_4:59247516-59247535 Msa0691220:CDS 45.0%
! TGGTGAACTTCCTTTGGTTC+AGG + chr4_4:59247522-59247541 Msa0691220:CDS 45.0%
!!! AACCACGTGTGTGTTGGTTT+TGG + chr4_4:59247747-59247766 Msa0691220:intron 45.0%
GACGTGTCTATTGTCCAATC+AGG - chr4_4:59247789-59247808 None:intergenic 45.0%
TGAGTAGATTTCCCAATGCC+GGG + chr4_4:59247837-59247856 Msa0691220:intron 45.0%
TCAAAGACCTACTAATCCGG+GGG - chr4_4:59248023-59248042 None:intergenic 45.0%
AAGAGGGGAAAAGTGAGAAG+AGG - chr4_4:59248433-59248452 None:intergenic 45.0%
! CTACCATGGTTTGCATGACA+GGG - chr4_4:59248705-59248724 None:intergenic 45.0%
! TCTACCATGGTTTGCATGAC+AGG - chr4_4:59248706-59248725 None:intergenic 45.0%
GGGAGAGTGAATTCTCTAAG+TGG + chr4_4:59249390-59249409 Msa0691220:CDS 45.0%
! CCGGTTTGCACCATGATATA+TGG - chr4_4:59249432-59249451 None:intergenic 45.0%
ATTGGAAGCAAATGGAGTGG+AGG + chr4_4:59249469-59249488 Msa0691220:CDS 45.0%
AGTAAGACCATATCGTCGCA+GGG - chr4_4:59249639-59249658 None:intergenic 45.0%
! TGCGACGATATGGTCTTACT+GGG + chr4_4:59249639-59249658 Msa0691220:CDS 45.0%
AACCCCTTAAACATGGTCAG+AGG + chr4_4:59249762-59249781 Msa0691220:CDS 45.0%
GACCTCTGACCATGTTTAAG+GGG - chr4_4:59249767-59249786 None:intergenic 45.0%
AGGACAAAGGAAGAGACCAT+AGG + chr4_4:59249869-59249888 Msa0691220:CDS 45.0%
GGACAAAGGAAGAGACCATA+GGG + chr4_4:59249870-59249889 Msa0691220:CDS 45.0%
! GACCATAGGGCATCTTATGA+TGG + chr4_4:59249883-59249902 Msa0691220:CDS 45.0%
! CCATAGGGCATCTTATGATG+GGG + chr4_4:59249885-59249904 Msa0691220:CDS 45.0%
AAGGACCTACCTTGTAGTTG+TGG + chr4_4:59250004-59250023 Msa0691220:CDS 45.0%
TGCAAAAGGACTGTACCAGA+TGG + chr4_4:59250052-59250071 Msa0691220:CDS 45.0%
CTGTACCAGATGGAGCTATT+TGG + chr4_4:59250062-59250081 Msa0691220:CDS 45.0%
TAAGGCCAAATAGCTCCATC+TGG - chr4_4:59250070-59250089 None:intergenic 45.0%
GTAGCTTGACAAGGTATGGA+AGG - chr4_4:59250147-59250166 None:intergenic 45.0%
GCTCTTAGTAACCACACTGA+TGG + chr4_4:59250545-59250564 Msa0691220:intron 45.0%
CTTAGTAACCACACTGATGG+AGG + chr4_4:59250548-59250567 Msa0691220:intron 45.0%
GATGCGCAGGAACAAAAGTA+AGG - chr4_4:59250807-59250826 None:intergenic 45.0%
CATAGCGTGTGCAAACTGAA+AGG - chr4_4:59250968-59250987 None:intergenic 45.0%
TTTGCACACGCTATGTTCAG+TGG + chr4_4:59250973-59250992 Msa0691220:intron 45.0%
!! GTGAAGAAGCATCTTGAGCA+TGG - chr4_4:59251028-59251047 None:intergenic 45.0%
GCTCAAGGTGATTGCTTATC+TGG - chr4_4:59251080-59251099 None:intergenic 45.0%
! GGTTTGGCTTAATCAGCTCA+AGG - chr4_4:59251095-59251114 None:intergenic 45.0%
GTTTGTCAGGGTCATCTTTG+GGG - chr4_4:59251116-59251135 None:intergenic 45.0%
!! AAGTTTGCTGCTGCTGTCTA+TGG + chr4_4:59251150-59251169 Msa0691220:CDS 45.0%
CCACCAACTAAGTCAATGTC+TGG - chr4_4:59251177-59251196 None:intergenic 45.0%
!! CCAGACATTGACTTAGTTGG+TGG + chr4_4:59251174-59251193 Msa0691220:CDS 45.0%
CATGCAGAATGAGAGTTTCC+TGG + chr4_4:59251200-59251219 Msa0691220:CDS 45.0%
!! AGCTACTCTTTTCAGGATGC+TGG + chr4_4:59251563-59251582 Msa0691220:intron 45.0%
TTTCAGGATGCTGGACATAC+TGG + chr4_4:59251572-59251591 Msa0691220:intron 45.0%
TTCCTGATATCAACTCGTGC+TGG + chr4_4:59251787-59251806 Msa0691220:CDS 45.0%
! TGATATCAACTCGTGCTGGT+GGG + chr4_4:59251791-59251810 Msa0691220:CDS 45.0%
TCTTGTGAGGGATTCCAGTT+GGG - chr4_4:59251862-59251881 None:intergenic 45.0%
GAATCCCTCACAAGACTTAC+AGG + chr4_4:59251867-59251886 Msa0691220:CDS 45.0%
! TGAGCCTGTAAGTCTTGTGA+GGG - chr4_4:59251874-59251893 None:intergenic 45.0%
CCGTTTCTGTCCATATCGAA+AGG - chr4_4:59251905-59251924 None:intergenic 45.0%
CTCTCAAACATTGCTGTCTC+TGG + chr4_4:59252003-59252022 Msa0691220:CDS 45.0%
!! AATACACAGGTTTTGGCACC+TGG - chr4_4:59252059-59252078 None:intergenic 45.0%
! GCATTTCAAGGGGAGCTTTT+TGG + chr4_4:59252152-59252171 Msa0691220:CDS 45.0%
ATGCGATTCAACGATCTCAC+TGG - chr4_4:59252219-59252238 None:intergenic 45.0%
! GTCATGTTCTGAATCTGCGA+GGG + chr4_4:59252334-59252353 Msa0691220:CDS 45.0%
ACTGCCTTTGAATCACTGGT+CGG - chr4_4:59252855-59252874 None:intergenic 45.0%
!! TCATGGACTAAAGTGCTGCT+TGG - chr4_4:59252919-59252938 None:intergenic 45.0%
CTCTGCAAGGAGGCTAAATT+GGG - chr4_4:59253007-59253026 None:intergenic 45.0%
ACTCTGCAAGGAGGCTAAAT+TGG - chr4_4:59253008-59253027 None:intergenic 45.0%
! ATTTTGCATTTAGCGGCGCG+CGG + chr4_4:59247053-59247072 Msa0691220:five_prime_UTR 50.0%
GATGTCGCTGCAAACTCTGA+AGG + chr4_4:59247144-59247163 Msa0691220:exon 50.0%
GGAATCGAAATCGCGGAGAA+GGG - chr4_4:59247230-59247249 None:intergenic 50.0%
TGGAATCGAAATCGCGGAGA+AGG - chr4_4:59247231-59247250 None:intergenic 50.0%
! TGGTGGGCAAGAGAGGATTT+GGG - chr4_4:59247277-59247296 None:intergenic 50.0%
TTCAAGGAGACGAAGGTGGT+GGG - chr4_4:59247293-59247312 None:intergenic 50.0%
TGTTGGGAAAGGAAATCGCG+GGG - chr4_4:59247340-59247359 None:intergenic 50.0%
GAATGCAACCACGTGTGTGT+TGG + chr4_4:59247741-59247760 Msa0691220:intron 50.0%
GTCCAAAACCAACACACACG+TGG - chr4_4:59247752-59247771 None:intergenic 50.0%
TGCTAGTTGAACCCGGCATT+GGG - chr4_4:59247851-59247870 None:intergenic 50.0%
TTGGGCCAGTCGCTTCAATT+GGG + chr4_4:59247970-59247989 Msa0691220:intron 50.0%
TTCAATTGGGTGTCCGCTAG+TGG + chr4_4:59247983-59248002 Msa0691220:intron 50.0%
!! GATTGATCCCCCGGATTAGT+AGG + chr4_4:59248013-59248032 Msa0691220:intron 50.0%
ACTGCTTGAGCATCAGAGAG+TGG + chr4_4:59248326-59248345 Msa0691220:CDS 50.0%
CTGCTTGAGCATCAGAGAGT+GGG + chr4_4:59248327-59248346 Msa0691220:CDS 50.0%
AGGGGAAAAGTGAGAAGAGG+AGG - chr4_4:59248430-59248449 None:intergenic 50.0%
GTTTGCATGACAGGGTTCTC+AGG - chr4_4:59248697-59248716 None:intergenic 50.0%
GAACCCTGTCATGCAAACCA+TGG + chr4_4:59248699-59248718 Msa0691220:intron 50.0%
CAGTAAGACCATATCGTCGC+AGG - chr4_4:59249640-59249659 None:intergenic 50.0%
! CTGCGACGATATGGTCTTAC+TGG + chr4_4:59249638-59249657 Msa0691220:CDS 50.0%
TTAGTTGCACCTGGATCCCT+TGG + chr4_4:59249707-59249726 Msa0691220:CDS 50.0%
CCCCATCATAAGATGCCCTA+TGG - chr4_4:59249888-59249907 None:intergenic 50.0%
! AGGGCATCTTATGATGGGGA+AGG + chr4_4:59249889-59249908 Msa0691220:CDS 50.0%
GGCTACCACAACTACAAGGT+AGG - chr4_4:59250012-59250031 None:intergenic 50.0%
AGAGGGCTACCACAACTACA+AGG - chr4_4:59250016-59250035 None:intergenic 50.0%
! GTAACGGGGATGAGAAAGAG+AGG + chr4_4:59250357-59250376 Msa0691220:intron 50.0%
GACAAATCCCTCCATCAGTG+TGG - chr4_4:59250559-59250578 None:intergenic 50.0%
ACAACTCACAAGTGATGCGC+AGG - chr4_4:59250820-59250839 None:intergenic 50.0%
GTGGCAATGGTAACAGTGGT+GGG - chr4_4:59250847-59250866 None:intergenic 50.0%
AAAGGCAATAGTGCTCCCCA+TGG - chr4_4:59250950-59250969 None:intergenic 50.0%
!! TCAGGGTCATCTTTGGGGTT+TGG - chr4_4:59251111-59251130 None:intergenic 50.0%
!! GGCCCAGACATTGACTTAGT+TGG + chr4_4:59251171-59251190 Msa0691220:CDS 50.0%
GTTCTGCATCACTTAGACCC+AGG - chr4_4:59251221-59251240 None:intergenic 50.0%
!! CACCAGCACGAGTTGATATC+AGG - chr4_4:59251792-59251811 None:intergenic 50.0%
CTGATATCAACTCGTGCTGG+TGG + chr4_4:59251790-59251809 Msa0691220:CDS 50.0%
GTCTTGTGAGGGATTCCAGT+TGG - chr4_4:59251863-59251882 None:intergenic 50.0%
! CTGAGCCTGTAAGTCTTGTG+AGG - chr4_4:59251875-59251894 None:intergenic 50.0%
CTCACAAGACTTACAGGCTC+AGG + chr4_4:59251873-59251892 Msa0691220:CDS 50.0%
AAGACTTACAGGCTCAGGAC+AGG + chr4_4:59251878-59251897 Msa0691220:CDS 50.0%
CAGGACAGGTCCTTTCGATA+TGG + chr4_4:59251892-59251911 Msa0691220:CDS 50.0%
TGGACAGAAACGGCATGTTG+TGG + chr4_4:59251912-59251931 Msa0691220:CDS 50.0%
GTATTCCGTCTTCTCTCAGC+TGG + chr4_4:59251934-59251953 Msa0691220:CDS 50.0%
GTGAACCAGCTGAGAGAAGA+CGG - chr4_4:59251942-59251961 None:intergenic 50.0%
! CATTGCTGTCTCTGGGAAGA+TGG + chr4_4:59252011-59252030 Msa0691220:CDS 50.0%
TAGCATCAGAGTCGGAAACC+AGG + chr4_4:59252312-59252331 Msa0691220:CDS 50.0%
CGCAGATTCAGAACATGACC+TGG - chr4_4:59252333-59252352 None:intergenic 50.0%
! GGTCATGTTCTGAATCTGCG+AGG + chr4_4:59252333-59252352 Msa0691220:CDS 50.0%
ACTCCCGACCAGTGATTCAA+AGG + chr4_4:59252848-59252867 Msa0691220:CDS 50.0%
CTGCCTTTGAATCACTGGTC+GGG - chr4_4:59252854-59252873 None:intergenic 50.0%
GCTTTCGCCATCGCTTGAAA+GGG - chr4_4:59252893-59252912 None:intergenic 50.0%
TAGCCTCCTTGCAGAGTCTA+TGG + chr4_4:59253011-59253030 Msa0691220:CDS 50.0%
AGCCTCCTTGCAGAGTCTAT+GGG + chr4_4:59253012-59253031 Msa0691220:CDS 50.0%
CTTGCAGAGTCTATGGGCAT+GGG + chr4_4:59253018-59253037 Msa0691220:CDS 50.0%
ATCGCGGAGAAGGGATTGTG+AGG - chr4_4:59247221-59247240 None:intergenic 55.0%
TGGGCAAGAGAGGATTTGGG+GGG - chr4_4:59247274-59247293 None:intergenic 55.0%
GTGGGCAAGAGAGGATTTGG+GGG - chr4_4:59247275-59247294 None:intergenic 55.0%
GGTGGGCAAGAGAGGATTTG+GGG - chr4_4:59247276-59247295 None:intergenic 55.0%
!! GTGGTGGGCAAGAGAGGATT+TGG - chr4_4:59247278-59247297 None:intergenic 55.0%
CTTCAAGGAGACGAAGGTGG+TGG - chr4_4:59247294-59247313 None:intergenic 55.0%
GGTCTTCAAGGAGACGAAGG+TGG - chr4_4:59247297-59247316 None:intergenic 55.0%
GCTGAAAAGGTGGGTCATCG+GGG - chr4_4:59247318-59247337 None:intergenic 55.0%
GGCTGAAAAGGTGGGTCATC+GGG - chr4_4:59247319-59247338 None:intergenic 55.0%
GGGCTGAAAAGGTGGGTCAT+CGG - chr4_4:59247320-59247339 None:intergenic 55.0%
AATCGCGGGGCTGAAAAGGT+GGG - chr4_4:59247327-59247346 None:intergenic 55.0%
AAATCGCGGGGCTGAAAAGG+TGG - chr4_4:59247328-59247347 None:intergenic 55.0%
AGGAAATCGCGGGGCTGAAA+AGG - chr4_4:59247331-59247350 None:intergenic 55.0%
GTGCTAGTTGAACCCGGCAT+TGG - chr4_4:59247852-59247871 None:intergenic 55.0%
GTTGGGCCAGTCGCTTCAAT+TGG + chr4_4:59247969-59247988 Msa0691220:intron 55.0%
GGACACCCAATTGAAGCGAC+TGG - chr4_4:59247978-59247997 None:intergenic 55.0%
TCAATCCCAGCGTCCACTAG+CGG - chr4_4:59247999-59248018 None:intergenic 55.0%
CACTCGCGTCTCGCTAAGAA+TGG - chr4_4:59249318-59249337 None:intergenic 55.0%
CATTCTTAGCGAGACGCGAG+TGG + chr4_4:59249316-59249335 Msa0691220:CDS 55.0%
! GGCACTGAATGTCAGGAAGC+TGG - chr4_4:59249976-59249995 None:intergenic 55.0%
GGTGGCAATGGTAACAGTGG+TGG - chr4_4:59250848-59250867 None:intergenic 55.0%
TCGGGTGGCAATGGTAACAG+TGG - chr4_4:59250851-59250870 None:intergenic 55.0%
!! TATGGAGTGTCGGGTGGCAA+TGG - chr4_4:59250860-59250879 None:intergenic 55.0%
! CGACACGGTTTGCACTGACA+AGG - chr4_4:59251828-59251847 None:intergenic 55.0%
!! ATCGCTTGAAAGGGTGCTGC+TGG - chr4_4:59252884-59252903 None:intergenic 55.0%
AGCAGCACCCTTTCAAGCGA+TGG + chr4_4:59252883-59252902 Msa0691220:CDS 55.0%
CGCTTTCGCCATCGCTTGAA+AGG - chr4_4:59252894-59252913 None:intergenic 55.0%
TGCCCATAGACTCTGCAAGG+AGG - chr4_4:59253017-59253036 None:intergenic 55.0%
CCATGCCCATAGACTCTGCA+AGG - chr4_4:59253020-59253039 None:intergenic 55.0%
CCTTGCAGAGTCTATGGGCA+TGG + chr4_4:59253017-59253036 Msa0691220:CDS 55.0%
!! ACGAAGGTGGTGGGCAAGAG+AGG - chr4_4:59247284-59247303 None:intergenic 60.0%
CGGGGTCTTCAAGGAGACGA+AGG - chr4_4:59247300-59247319 None:intergenic 60.0%
GTGGGTCATCGGGGTCTTCA+AGG - chr4_4:59247309-59247328 None:intergenic 60.0%
CACCTGGATCCCTTGGAACG+CGG + chr4_4:59249714-59249733 Msa0691220:CDS 60.0%
ACCTGGATCCCTTGGAACGC+GGG + chr4_4:59249715-59249734 Msa0691220:CDS 60.0%
! GAAGTGCTCCCGCGTTCCAA+GGG - chr4_4:59249726-59249745 None:intergenic 60.0%
!! TCAACTCGTGCTGGTGGGCT+TGG + chr4_4:59251796-59251815 Msa0691220:CDS 60.0%
! GGTGTCCGCTAGTGGACGCT+GGG + chr4_4:59247991-59248010 Msa0691220:intron 65.0%
GGACGCTGGGATTGATCCCC+CGG + chr4_4:59248004-59248023 Msa0691220:intron 65.0%
TCCCGCGTTCCAAGGGATCC+AGG - chr4_4:59249719-59249738 None:intergenic 65.0%
!! GGAAGTGCTCCCGCGTTCCA+AGG - chr4_4:59249727-59249746 None:intergenic 65.0%
! GGGTGTCCGCTAGTGGACGC+TGG + chr4_4:59247990-59248009 Msa0691220:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 59247024 59253338 59247024 ID=Msa0691220;Name=Msa0691220
chr4_4 mRNA 59247024 59253338 59247024 ID=Msa0691220-mRNA-1;Parent=Msa0691220;Name=Msa0691220-mRNA-1;_AED=0.03;_eAED=0.03;_QI=121|1|1|1|1|1|8|198|885
chr4_4 exon 59247024 59247543 59247024 ID=Msa0691220-mRNA-1:exon:16010;Parent=Msa0691220-mRNA-1
chr4_4 exon 59248303 59248409 59248303 ID=Msa0691220-mRNA-1:exon:16011;Parent=Msa0691220-mRNA-1
chr4_4 exon 59249250 59250171 59249250 ID=Msa0691220-mRNA-1:exon:16012;Parent=Msa0691220-mRNA-1
chr4_4 exon 59251081 59251328 59251081 ID=Msa0691220-mRNA-1:exon:16013;Parent=Msa0691220-mRNA-1
chr4_4 exon 59251578 59251704 59251578 ID=Msa0691220-mRNA-1:exon:16014;Parent=Msa0691220-mRNA-1
chr4_4 exon 59251784 59252059 59251784 ID=Msa0691220-mRNA-1:exon:16015;Parent=Msa0691220-mRNA-1
chr4_4 exon 59252143 59252392 59252143 ID=Msa0691220-mRNA-1:exon:16016;Parent=Msa0691220-mRNA-1
chr4_4 exon 59252812 59253338 59252812 ID=Msa0691220-mRNA-1:exon:16017;Parent=Msa0691220-mRNA-1
chr4_4 five_prime_UTR 59247024 59247144 59247024 ID=Msa0691220-mRNA-1:five_prime_utr;Parent=Msa0691220-mRNA-1
chr4_4 CDS 59247145 59247543 59247145 ID=Msa0691220-mRNA-1:cds;Parent=Msa0691220-mRNA-1
chr4_4 CDS 59248303 59248409 59248303 ID=Msa0691220-mRNA-1:cds;Parent=Msa0691220-mRNA-1
chr4_4 CDS 59249250 59250171 59249250 ID=Msa0691220-mRNA-1:cds;Parent=Msa0691220-mRNA-1
chr4_4 CDS 59251081 59251328 59251081 ID=Msa0691220-mRNA-1:cds;Parent=Msa0691220-mRNA-1
chr4_4 CDS 59251578 59251704 59251578 ID=Msa0691220-mRNA-1:cds;Parent=Msa0691220-mRNA-1
chr4_4 CDS 59251784 59252059 59251784 ID=Msa0691220-mRNA-1:cds;Parent=Msa0691220-mRNA-1
chr4_4 CDS 59252143 59252392 59252143 ID=Msa0691220-mRNA-1:cds;Parent=Msa0691220-mRNA-1
chr4_4 CDS 59252812 59253140 59252812 ID=Msa0691220-mRNA-1:cds;Parent=Msa0691220-mRNA-1
chr4_4 three_prime_UTR 59253141 59253338 59253141 ID=Msa0691220-mRNA-1:three_prime_utr;Parent=Msa0691220-mRNA-1
Gene Sequence

>Msa0691220

ATGTCGCTGCAAACTCTGAAGGAATTAACACTGAGACACTGCTCAACCCAACAATCACAATCACAACCATCTTCCTCACAATCCCTTCTCCGCGATTTCGATTCCAACTTCCCTATCAACAGAAAACCCCCCAAATCCTCTCTTGCCCACCACCTTCGTCTCCTTGAAGACCCCGATGACCCACCTTTTCAGCCCCGCGATTTCCTTTCCCAACATAACCATTCCCAAACCCAAGAACAACAAGTAAAACTAGATAAAGAAGAAGAAGATGAGGAGGAAGAGCCAGAAATAAAGTGTGTGAAATTTAGTTCTGTTAAATCCTCTCAGATTCAATTTGATCATACTGGACCTTTTGAGCCTTTGCTTTTGTCCTCTGATGGTGAACTTCCTTTGGTTCAGGTTCCTGCATCTATAAACTGTAGACTGCTTGAGCATCAGAGAGTGGGAGTGAAGTTTCTGTATGATTTGTACAAGAATAATAAGGGAGGCATCCTTGGAGATGACATGGGTCTTGGAAAGACCATTCAAACAATAGCATTTCTTGCTGCCATATTTGGTAAAGAAGGAGACTCCATTCTTAGCGAGACGCGAGTGGATAAAAGAGACCCTGTATTAATAATTTGCCCATCATCCATTATTCAAAACTGGGAGAGTGAATTCTCTAAGTGGTCTAACTTCAGCGTTGCCATATATCATGGTGCAAACCGGGATTTGATATATGATAAATTGGAAGCAAATGGAGTGGAGGTACTTATTACCAGTTTTGACACTTACAGGATTCACGGCAGCAGTTCCTTATCAGATATACACTGGAACACTGTGATTATTGATGAGGCTCATCGGCTTAAGAATGAGAAATCAAAACTCTATAAAGCATGTTTAGAAATTAAAACCCTGCGACGATATGGTCTTACTGGGACCGTAATGCAAAATAAGATCTTAGAATTGTTCAATATCTTTGATTTAGTTGCACCTGGATCCCTTGGAACGCGGGAGCACTTCCGTGAGTTTTATGATGAACCCCTTAAACATGGTCAGAGGTCAACTGCTCCTGATAGATTTGTCCAAATTGCTAATAAGAGAAAACAACACCTTGTATCAGTTCTTAATAAATATATGTTGAGAAGGACAAAGGAAGAGACCATAGGGCATCTTATGATGGGGAAGGAAGATAACATTGTTTTTTGTGCAATGAGTGATTTGCAAAAACGCATTTATAGGAGAATGATCCAGCTTCCTGACATTCAGTGCCTTATAAACAAGGACCTACCTTGTAGTTGTGGTAGCCCTCTCACTCAAGTTGAATGTTGCAAAAGGACTGTACCAGATGGAGCTATTTGGCCTTACCTTCACAAAGATAACCTCGATGATGGATGTGATTCATGCCCCTATTGTATTGTCCTTCCATACCTTGTCAAGCTACAACAGATAAGCAATCACCTTGAGCTGATTAAGCCAAACCCCAAAGATGACCCTGACAAACAAGTTAAAGATGCAAAGTTTGCTGCTGCTGTCTATGGCCCAGACATTGACTTAGTTGGTGGGAGCATGCAGAATGAGAGTTTCCTGGGTCTAAGTGATGCAGAACATTGTGGCAAAATGCGAGCACTTGAAAAGCTGTTGTTGTCATGGTTTTCACATGGCGACAAAGTTCTTTTGTTTAGCTATTCTGTAAGGATGCTGGACATACTGGAGAAATTTATCATAAGAAAAGGCTACTGCTTCTCAAGACTTGATGGGTCCACTCCAACTAATTTACGTCAGTCTCTGGTTGATGATTTCAACTCTAGTCCAAGCAAACAAGTGTTCCTGATATCAACTCGTGCTGGTGGGCTTGGATTGAACCTTGTCAGTGCAAACCGTGTCGTAATATTTGATCCCAACTGGAATCCCTCACAAGACTTACAGGCTCAGGACAGGTCCTTTCGATATGGACAGAAACGGCATGTTGTGGTATTCCGTCTTCTCTCAGCTGGTTCACTTGAAGAACTAGTTTATTCTCGTCAGGTGTACAAGCAGCAGCTCTCAAACATTGCTGTCTCTGGGAAGATGGAAAAACGATATTTTGAAGGTGTCCAGGATTGCAAAGCATTTCAAGGGGAGCTTTTTGGAATTTGCAATTTATTTCGAGATTTATCTGATAAACTATTTACCAGTGAGATCGTTGAATCGCATGAGACGAATAAAAAAGACGGGCTTAAAACAGAACAACAGAAAAAAATAAATATTTCAGAAGAAACAAGTTTGTTAGCATCAGAGTCGGAAACCAGGTCATGTTCTGAATCTGCGAGGGCTACAAGTAAACCAGATATTGAATTTGAAGACGTCGGCATTGTCTACGCTCATCGCAATGAAGACATTGTCAACTCCCGACCAGTGATTCAAAGGCAGTTATCTACCAGCAGCACCCTTTCAAGCGATGGCGAAAGCGAGCCAAGCAGCACTTTAGTCCATGAAATGAAGAAACCAGAATGTGTACCTAAAAAACAGAAAATTCCTTTGATTGATGAAAGGAAGAGAGCCCAATTTAGCCTCCTTGCAGAGTCTATGGGCATGGGAGAGCTTGCATTTAGCAAATGGTTACTATCAGCCACTTCAGTAGAGAGAGAAAAAGTGCTTATAGACTACAAGAAGAAAAAGAAAAAGCTTAAAGGTTAA
Protein sequence

>Msa0691220

MSLQTLKELTLRHCSTQQSQSQPSSSQSLLRDFDSNFPINRKPPKSSLAHHLRLLEDPDDPPFQPRDFLSQHNHSQTQEQQVKLDKEEEDEEEEPEIKCVKFSSVKSSQIQFDHTGPFEPLLLSSDGELPLVQVPASINCRLLEHQRVGVKFLYDLYKNNKGGILGDDMGLGKTIQTIAFLAAIFGKEGDSILSETRVDKRDPVLIICPSSIIQNWESEFSKWSNFSVAIYHGANRDLIYDKLEANGVEVLITSFDTYRIHGSSSLSDIHWNTVIIDEAHRLKNEKSKLYKACLEIKTLRRYGLTGTVMQNKILELFNIFDLVAPGSLGTREHFREFYDEPLKHGQRSTAPDRFVQIANKRKQHLVSVLNKYMLRRTKEETIGHLMMGKEDNIVFCAMSDLQKRIYRRMIQLPDIQCLINKDLPCSCGSPLTQVECCKRTVPDGAIWPYLHKDNLDDGCDSCPYCIVLPYLVKLQQISNHLELIKPNPKDDPDKQVKDAKFAAAVYGPDIDLVGGSMQNESFLGLSDAEHCGKMRALEKLLLSWFSHGDKVLLFSYSVRMLDILEKFIIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPSQDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDCKAFQGELFGICNLFRDLSDKLFTSEIVESHETNKKDGLKTEQQKKINISEETSLLASESETRSCSESARATSKPDIEFEDVGIVYAHRNEDIVNSRPVIQRQLSTSSTLSSDGESEPSSTLVHEMKKPECVPKKQKIPLIDERKRAQFSLLAESMGMGELAFSKWLLSATSVEREKVLIDYKKKKKKLKG*