AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0691600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0691600 MtrunA17_Chr4g0041151 93.443 305 14 2 1 302 1 302 0.0 512
Msa0691600 MtrunA17_Chr2g0283871 49.379 322 108 6 19 303 11 314 3.13e-87 264
Msa0691600 MtrunA17_Chr8g0344681 38.966 290 144 7 27 297 64 339 9.73e-46 159
Msa0691600 MtrunA17_Chr2g0325841 33.924 395 156 11 8 305 23 409 1.74e-39 147
Msa0691600 MtrunA17_Chr2g0331931 31.250 288 141 7 14 293 255 493 3.52e-27 110
Msa0691600 MtrunA17_Chr1g0179531 37.255 102 57 3 31 131 133 228 1.43e-16 80.1
Msa0691600 MtrunA17_Chr6g0485241 38.947 95 52 2 31 124 130 219 1.90e-16 79.0
Msa0691600 MtrunA17_Chr3g0082261 25.352 284 177 8 26 291 33 299 1.30e-14 73.2
Msa0691600 MtrunA17_Chr4g0066271 35.922 103 63 2 30 131 116 216 2.00e-14 73.2
Msa0691600 MtrunA17_Chr1g0164461 33.333 102 60 2 26 127 33 126 3.90e-12 64.3
Msa0691600 MtrunA17_Chr7g0250201 41.429 70 40 1 30 99 45 113 3.60e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0691600 AT3G58630.2 47.678 323 123 9 1 299 1 301 2.74e-74 231
Msa0691600 AT3G58630.1 47.678 323 123 9 1 299 1 301 4.65e-74 231
Msa0691600 AT3G11100.1 41.781 292 115 9 13 302 9 247 2.96e-49 164
Msa0691600 AT5G05550.3 39.493 276 116 5 27 302 20 244 7.16e-49 164
Msa0691600 AT5G05550.1 39.493 276 116 5 27 302 20 244 9.04e-49 163
Msa0691600 AT5G05550.2 39.636 275 115 5 27 301 20 243 1.34e-48 163
Msa0691600 AT3G14180.1 33.929 336 147 7 27 293 80 409 6.81e-42 150
Msa0691600 AT1G54060.1 51.485 101 44 2 27 127 90 185 7.49e-22 95.1
Msa0691600 AT3G10030.2 39.669 121 66 3 16 134 144 259 1.55e-20 92.4
Msa0691600 AT3G10030.1 39.669 121 66 3 16 134 144 259 1.86e-20 92.0
Msa0691600 AT3G54390.1 27.645 293 167 9 19 299 23 282 3.21e-16 78.2
Msa0691600 AT3G54390.2 27.645 293 167 9 19 299 39 298 3.78e-16 78.2
Msa0691600 AT3G24490.1 38.298 94 52 2 31 124 90 177 2.88e-15 75.9
Msa0691600 AT2G44730.1 34.737 95 59 2 30 123 63 155 6.01e-12 66.2

Find 109 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGAAACCAAACTCCTTA+TGG 0.211114 4_4:+59813093 None:intergenic
TGAAACGCGGTTGTTGAGTT+TGG 0.293921 4_4:+59813798 None:intergenic
GGCTGCTGCGGCGGCGGCTG+AGG 0.328447 4_4:-59813174 Msa0691600:CDS
ACAGAGACAAATGGTGGAAT+TGG 0.329589 4_4:-59813012 Msa0691600:CDS
GATGCAGTTTGTGAAGGATT+TGG 0.330097 4_4:-59812979 Msa0691600:CDS
CTTCCACCCTCATCGACGCC+TGG 0.342555 4_4:-59813670 Msa0691600:CDS
AACTCAACAACCGCGTTTCA+TGG 0.344366 4_4:-59813795 Msa0691600:exon
ACGTCGCGCTTTCTTGTTAC+CGG 0.348904 4_4:+59813559 None:intergenic
TCCCCGTCCGCGAAGACTGC+TGG 0.376207 4_4:-59813706 Msa0691600:CDS
CGCGGCGGCTGCTGCGGCGG+CGG 0.380481 4_4:-59813180 Msa0691600:CDS
GATGGGACCCATAAGGAGTT+TGG 0.382677 4_4:-59813101 Msa0691600:CDS
TCTGAAACCAAACTCCTTAT+GGG 0.394233 4_4:+59813094 None:intergenic
GTAACCTTCGTCAGAAAACT+TGG 0.396096 4_4:-59813619 Msa0691600:CDS
CTGGTAACCGCCGTCGGATT+CGG 0.403172 4_4:+59813466 None:intergenic
ATCGTTCCGGCGGAATTTCT+CGG 0.404517 4_4:-59813207 Msa0691600:CDS
GGTGGAGAGGGTGGAGATGG+TGG 0.405198 4_4:+59813326 None:intergenic
GAGGGTGGAAGTTGCGTCTT+CGG 0.412190 4_4:+59813682 None:intergenic
TCTTCTTTAACGTGTCGATT+CGG 0.420026 4_4:+59813516 None:intergenic
AGTACAAGATCGAGAAAGCT+AGG 0.431421 4_4:-59813493 Msa0691600:CDS
TTCCACCCTCATCGACGCCT+GGG 0.432995 4_4:-59813669 Msa0691600:CDS
AAACGCACTAAACGTGCTTC+TGG 0.443118 4_4:-59812903 Msa0691600:CDS
GTGTGGAGTCAGAGGAATGG+AGG 0.449241 4_4:-59813145 Msa0691600:CDS
GTCCAGCAGTCTTCGCGGAC+GGG 0.450561 4_4:+59813704 None:intergenic
ACTAAACGTGCTTCTGGTTC+CGG 0.451057 4_4:-59812897 Msa0691600:intron
GGCGGCGTGGACGTCGTTGA+CGG 0.453788 4_4:+59813580 None:intergenic
CATCCGGTCGGTCCCCGATC+CGG 0.459199 4_4:-59813269 Msa0691600:CDS
AAAGAGACGAAGCATCGTTC+CGG 0.461522 4_4:-59813220 Msa0691600:CDS
GACGAAGGTTACCGCGGTTG+AGG 0.467100 4_4:+59813630 None:intergenic
TGGTTGCTTGCAGCAGAAGT+TGG 0.477729 4_4:-59812747 Msa0691600:intron
TGTGGAGTCAGAGGAATGGA+GGG 0.481728 4_4:-59813144 Msa0691600:CDS
GACGGTGGAGAGGGTGGAGA+TGG 0.482196 4_4:+59813323 None:intergenic
GGTTGCTTGCAGCAGAAGTT+GGG 0.485653 4_4:-59812746 Msa0691600:intron
GGTTACCGCGGTTGAGGTCG+AGG 0.489164 4_4:+59813636 None:intergenic
GTTCGCGGCGGCTGCTGCGG+CGG 0.489343 4_4:-59813183 Msa0691600:CDS
GGCGTTCGCGGCGGCTGCTG+CGG 0.494203 4_4:-59813186 Msa0691600:CDS
ACCGTCTCCACCGTCGCCTC+CGG 0.494561 4_4:-59813306 Msa0691600:CDS
TCCAGCAGTCTTCGCGGACG+GGG 0.495685 4_4:+59813705 None:intergenic
TGGAGTCAGAGGAATGGAGG+GGG 0.503575 4_4:-59813142 Msa0691600:CDS
ACTCGTCTTGACGTTCTCAT+CGG 0.505614 4_4:-59813425 Msa0691600:CDS
CAGTCTTCGCGGACGGGGAA+CGG 0.508470 4_4:+59813710 None:intergenic
GCGGAATTTCTCGGCGTTCG+CGG 0.513561 4_4:-59813198 Msa0691600:CDS
GTTGATAGGTGACGGAGCTC+CGG 0.518538 4_4:+59813763 None:intergenic
CGCGGCGGAACGGAGTTGAT+AGG 0.521754 4_4:+59813749 None:intergenic
GGAGAGGGTGGAGATGGTGG+AGG 0.523602 4_4:+59813329 None:intergenic
GGTTGACGTTTGACGACGGT+TGG 0.525221 4_4:+59813350 None:intergenic
TCTCCCCGCCGGTGAATGTA+CGG 0.525928 4_4:-59813379 Msa0691600:CDS
AGAAAACGATGGGACCCATA+AGG 0.527107 4_4:-59813108 Msa0691600:CDS
GGTGGAGACGGTGGAGAGGG+TGG 0.527863 4_4:+59813317 None:intergenic
GGTCCAGCAGTCTTCGCGGA+CGG 0.531762 4_4:+59813703 None:intergenic
GCCGGAGGCGACGGTGGAGA+CGG 0.537471 4_4:+59813305 None:intergenic
GGAGTAGACCGTACATTCAC+CGG 0.542070 4_4:+59813371 None:intergenic
TCAGAGAATGCAGTTATACA+TGG 0.544592 4_4:-59812952 Msa0691600:CDS
GGCAGAAAGTGTGGAGTCAG+AGG 0.545717 4_4:-59813153 Msa0691600:CDS
GTTCCGGATCGGGGACCGAC+CGG 0.547076 4_4:+59813266 None:intergenic
ATTATCCACGCCGGAGGCGA+CGG 0.547703 4_4:+59813296 None:intergenic
CGACGGTGGAGACGGTGGAG+AGG 0.548909 4_4:+59813313 None:intergenic
GTGGACGTCGTTGACGGCGT+CGG 0.549602 4_4:+59813586 None:intergenic
GCAGAGGATGCAGTTTGTGA+AGG 0.549708 4_4:-59812985 Msa0691600:CDS
GGCGATGACGACGGAAGACG+CGG 0.549924 4_4:+59813731 None:intergenic
CTTCGGTCCAGCAGTCTTCG+CGG 0.552125 4_4:+59813699 None:intergenic
ACGGCGGTTACCAGAGTCCC+TGG 0.554940 4_4:-59813457 Msa0691600:CDS
TGGTTTCAGAGAGCTCGCTC+AGG 0.555951 4_4:-59813081 Msa0691600:CDS
AAAGTGTGGAGTCAGAGGAA+TGG 0.557513 4_4:-59813148 Msa0691600:CDS
AGCTTCAAAACAGAGACAAA+TGG 0.558007 4_4:-59813021 Msa0691600:CDS
CGACGGAAGACGCGGCGGAA+CGG 0.559377 4_4:+59813739 None:intergenic
GTCAACGACGTCCACGCCGC+CGG 0.559754 4_4:-59813578 Msa0691600:CDS
GACGGTGGAGACGGTGGAGA+GGG 0.563006 4_4:+59813314 None:intergenic
GGCGTGGATAATCTCTCATC+CGG 0.563671 4_4:-59813285 Msa0691600:CDS
TTCACCCCAGGCGTCGATGA+GGG 0.566151 4_4:+59813664 None:intergenic
GTCGAGGTAGCGTTCACCCC+AGG 0.569139 4_4:+59813652 None:intergenic
ACCCCAGGCGTCGATGAGGG+TGG 0.576167 4_4:+59813667 None:intergenic
CTCCACCGTCGCCTCCGGCG+TGG 0.577896 4_4:-59813301 Msa0691600:CDS
GTACAAGATCGAGAAAGCTA+GGG 0.590074 4_4:-59813492 Msa0691600:CDS
ACGGGGAACGGCGATGACGA+CGG 0.590204 4_4:+59813722 None:intergenic
GGCGGACGGAGGCTAACTGA+TGG 0.596962 4_4:+59813850 None:intergenic
GAGACGAAGCATCGTTCCGG+CGG 0.597085 4_4:-59813217 Msa0691600:CDS
TGGATAATCTCTCATCCGGT+CGG 0.599124 4_4:-59813281 Msa0691600:CDS
CGTTTCATGGACATCATCGC+CGG 0.603278 4_4:-59813782 Msa0691600:exon
ATCCACGCCGGAGGCGACGG+TGG 0.604964 4_4:+59813299 None:intergenic
TGTTGAGTTTGGAAAATCGA+CGG 0.605500 4_4:+59813809 None:intergenic
AGAAAGGAAGAGAAAACGAT+GGG 0.606592 4_4:-59813118 Msa0691600:CDS
CTTTCTTGTTACCGGCGGCG+TGG 0.607096 4_4:+59813567 None:intergenic
TCGTCAGAAAACTTGGCAAG+AGG 0.608905 4_4:-59813612 Msa0691600:CDS
GTGGAGTCAGAGGAATGGAG+GGG 0.611126 4_4:-59813143 Msa0691600:CDS
TAGACCGTACATTCACCGGC+GGG 0.615042 4_4:+59813375 None:intergenic
GTTCACCCCAGGCGTCGATG+AGG 0.617071 4_4:+59813663 None:intergenic
GGAGGCGACGGTGGAGACGG+TGG 0.619172 4_4:+59813308 None:intergenic
TGGTGGAATTGGAGAAGCAG+AGG 0.620275 4_4:-59813001 Msa0691600:CDS
GGCGGCTGAGGCAGAAAGTG+TGG 0.620535 4_4:-59813162 Msa0691600:CDS
TCCACCCTCATCGACGCCTG+GGG 0.621538 4_4:-59813668 Msa0691600:CDS
GGAACGGAGTTGATAGGTGA+CGG 0.622230 4_4:+59813755 None:intergenic
GGGACTCTGGTAACCGCCGT+CGG 0.624801 4_4:+59813460 None:intergenic
GAATTTCTCGGCGTTCGCGG+CGG 0.637732 4_4:-59813195 Msa0691600:CDS
AAGAAAGGAAGAGAAAACGA+TGG 0.648071 4_4:-59813119 Msa0691600:CDS
CGAACGCCGAGAAATTCCGC+CGG 0.653177 4_4:+59813201 None:intergenic
GCAGTTATACATGGAAACGC+AGG 0.653381 4_4:-59812943 Msa0691600:CDS
CGCTACCTCGACCTCAACCG+CGG 0.655983 4_4:-59813641 Msa0691600:CDS
TGAGAGATTATCCACGCCGG+AGG 0.660526 4_4:+59813290 None:intergenic
GAGTTTGGAAAATCGACGGA+CGG 0.661497 4_4:+59813813 None:intergenic
TTCAAAACAGAGACAAATGG+TGG 0.662111 4_4:-59813018 Msa0691600:CDS
GCTAGGGTTTCCGAATCCGA+CGG 0.665069 4_4:-59813476 Msa0691600:CDS
TCGCGCTTTCTTGTTACCGG+CGG 0.665856 4_4:+59813562 None:intergenic
AGGGTTTCCGAATCCGACGG+CGG 0.672515 4_4:-59813473 Msa0691600:CDS
GATGACGACGGAAGACGCGG+CGG 0.700874 4_4:+59813734 None:intergenic
AGACCGTACATTCACCGGCG+GGG 0.706976 4_4:+59813376 None:intergenic
GCGATGATGTCCATGAAACG+CGG 0.716790 4_4:+59813785 None:intergenic
GTAGACCGTACATTCACCGG+CGG 0.721299 4_4:+59813374 None:intergenic
TGGAGGTTGACGTTTGACGA+CGG 0.728369 4_4:+59813346 None:intergenic
GGATGAGAGATTATCCACGC+CGG 0.738065 4_4:+59813287 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGATCATAAATTTGAAAC+AGG + chr4_4:59813759-59813778 None:intergenic 20.0%
!! CTTATGCTTAATGATTATTA+GGG - chr4_4:59813813-59813832 Msa0691600:five_prime_UTR 20.0%
!! TTATGCTTAATGATTATTAG+GGG - chr4_4:59813814-59813833 Msa0691600:five_prime_UTR 20.0%
!! ATCACATTAATGTGTAAATT+TGG - chr4_4:59813844-59813863 Msa0691600:five_prime_UTR 20.0%
!!! TGTGTAAATTTGGTTTTATA+TGG - chr4_4:59813854-59813873 Msa0691600:five_prime_UTR 20.0%
!!! TATTTTGTTACTTGTGATAA+TGG - chr4_4:59813898-59813917 Msa0691600:five_prime_UTR 20.0%
!!! AATGATCATAAATTTGAAAC+AGG + chr4_4:59813759-59813778 None:intergenic 20.0%
!! CTTATGCTTAATGATTATTA+GGG - chr4_4:59813813-59813832 Msa0691600:five_prime_UTR 20.0%
!! TTATGCTTAATGATTATTAG+GGG - chr4_4:59813814-59813833 Msa0691600:five_prime_UTR 20.0%
!! ATCACATTAATGTGTAAATT+TGG - chr4_4:59813844-59813863 Msa0691600:five_prime_UTR 20.0%
!!! TGTGTAAATTTGGTTTTATA+TGG - chr4_4:59813854-59813873 Msa0691600:five_prime_UTR 20.0%
!!! TATTTTGTTACTTGTGATAA+TGG - chr4_4:59813898-59813917 Msa0691600:five_prime_UTR 20.0%
! GCTTATGCTTAATGATTATT+AGG - chr4_4:59813812-59813831 Msa0691600:five_prime_UTR 25.0%
! GCTTATGCTTAATGATTATT+AGG - chr4_4:59813812-59813831 Msa0691600:five_prime_UTR 25.0%
TGTTGAGTTTGGAAAATCGA+CGG + chr4_4:59812815-59812834 None:intergenic 35.0%
!! TCTTCTTTAACGTGTCGATT+CGG + chr4_4:59813108-59813127 None:intergenic 35.0%
AAGAAAGGAAGAGAAAACGA+TGG - chr4_4:59813502-59813521 Msa0691600:CDS 35.0%
AGAAAGGAAGAGAAAACGAT+GGG - chr4_4:59813503-59813522 Msa0691600:CDS 35.0%
! TCTGAAACCAAACTCCTTAT+GGG + chr4_4:59813530-59813549 None:intergenic 35.0%
AGCTTCAAAACAGAGACAAA+TGG - chr4_4:59813600-59813619 Msa0691600:CDS 35.0%
TTCAAAACAGAGACAAATGG+TGG - chr4_4:59813603-59813622 Msa0691600:CDS 35.0%
TCAGAGAATGCAGTTATACA+TGG - chr4_4:59813669-59813688 Msa0691600:CDS 35.0%
TGTTGAGTTTGGAAAATCGA+CGG + chr4_4:59812815-59812834 None:intergenic 35.0%
!! TCTTCTTTAACGTGTCGATT+CGG + chr4_4:59813108-59813127 None:intergenic 35.0%
AAGAAAGGAAGAGAAAACGA+TGG - chr4_4:59813502-59813521 Msa0691600:CDS 35.0%
AGAAAGGAAGAGAAAACGAT+GGG - chr4_4:59813503-59813522 Msa0691600:CDS 35.0%
! TCTGAAACCAAACTCCTTAT+GGG + chr4_4:59813530-59813549 None:intergenic 35.0%
AGCTTCAAAACAGAGACAAA+TGG - chr4_4:59813600-59813619 Msa0691600:CDS 35.0%
TTCAAAACAGAGACAAATGG+TGG - chr4_4:59813603-59813622 Msa0691600:CDS 35.0%
TCAGAGAATGCAGTTATACA+TGG - chr4_4:59813669-59813688 Msa0691600:CDS 35.0%
GTAACCTTCGTCAGAAAACT+TGG - chr4_4:59813002-59813021 Msa0691600:CDS 40.0%
AGTACAAGATCGAGAAAGCT+AGG - chr4_4:59813128-59813147 Msa0691600:CDS 40.0%
GTACAAGATCGAGAAAGCTA+GGG - chr4_4:59813129-59813148 Msa0691600:CDS 40.0%
ACGTCAAGACGAGTGAAAAA+CGG + chr4_4:59813190-59813209 None:intergenic 40.0%
!! CTCTGAAACCAAACTCCTTA+TGG + chr4_4:59813531-59813550 None:intergenic 40.0%
! ACAGAGACAAATGGTGGAAT+TGG - chr4_4:59813609-59813628 Msa0691600:CDS 40.0%
GATGCAGTTTGTGAAGGATT+TGG - chr4_4:59813642-59813661 Msa0691600:CDS 40.0%
TTGAAACAGGTTAAGCTCAC+CGG + chr4_4:59813746-59813765 None:intergenic 40.0%
GTAACCTTCGTCAGAAAACT+TGG - chr4_4:59813002-59813021 Msa0691600:CDS 40.0%
AGTACAAGATCGAGAAAGCT+AGG - chr4_4:59813128-59813147 Msa0691600:CDS 40.0%
GTACAAGATCGAGAAAGCTA+GGG - chr4_4:59813129-59813148 Msa0691600:CDS 40.0%
ACGTCAAGACGAGTGAAAAA+CGG + chr4_4:59813190-59813209 None:intergenic 40.0%
!! CTCTGAAACCAAACTCCTTA+TGG + chr4_4:59813531-59813550 None:intergenic 40.0%
! ACAGAGACAAATGGTGGAAT+TGG - chr4_4:59813609-59813628 Msa0691600:CDS 40.0%
GATGCAGTTTGTGAAGGATT+TGG - chr4_4:59813642-59813661 Msa0691600:CDS 40.0%
TTGAAACAGGTTAAGCTCAC+CGG + chr4_4:59813746-59813765 None:intergenic 40.0%
GAGTTTGGAAAATCGACGGA+CGG + chr4_4:59812811-59812830 None:intergenic 45.0%
TGAAACGCGGTTGTTGAGTT+TGG + chr4_4:59812826-59812845 None:intergenic 45.0%
AACTCAACAACCGCGTTTCA+TGG - chr4_4:59812826-59812845 Msa0691600:intron 45.0%
! TTTTCTGACGAAGGTTACCG+CGG + chr4_4:59813000-59813019 None:intergenic 45.0%
! CTTGCCAAGTTTTCTGACGA+AGG + chr4_4:59813009-59813028 None:intergenic 45.0%
TCGTCAGAAAACTTGGCAAG+AGG - chr4_4:59813009-59813028 Msa0691600:CDS 45.0%
! TCGGTTTTTGCACTGAACGT+CGG + chr4_4:59813089-59813108 None:intergenic 45.0%
ACTCGTCTTGACGTTCTCAT+CGG - chr4_4:59813196-59813215 Msa0691600:CDS 45.0%
! TCTCATCGGCGATACTTTTC+CGG - chr4_4:59813210-59813229 Msa0691600:CDS 45.0%
TGGATAATCTCTCATCCGGT+CGG - chr4_4:59813340-59813359 Msa0691600:CDS 45.0%
! ACGTTTTTGTGTTCCGGATC+GGG + chr4_4:59813368-59813387 None:intergenic 45.0%
! GACGTTTTTGTGTTCCGGAT+CGG + chr4_4:59813369-59813388 None:intergenic 45.0%
ATCCGGAACACAAAAACGTC+CGG - chr4_4:59813369-59813388 Msa0691600:CDS 45.0%
AACACAAAAACGTCCGGCAA+TGG - chr4_4:59813375-59813394 Msa0691600:CDS 45.0%
!! AAAGAGACGAAGCATCGTTC+CGG - chr4_4:59813401-59813420 Msa0691600:CDS 45.0%
AAAGTGTGGAGTCAGAGGAA+TGG - chr4_4:59813473-59813492 Msa0691600:CDS 45.0%
AGAAAACGATGGGACCCATA+AGG - chr4_4:59813513-59813532 Msa0691600:CDS 45.0%
GCAGTTATACATGGAAACGC+AGG - chr4_4:59813678-59813697 Msa0691600:CDS 45.0%
AAACGCACTAAACGTGCTTC+TGG - chr4_4:59813718-59813737 Msa0691600:CDS 45.0%
!! ACTAAACGTGCTTCTGGTTC+CGG - chr4_4:59813724-59813743 Msa0691600:CDS 45.0%
GAGTTTGGAAAATCGACGGA+CGG + chr4_4:59812811-59812830 None:intergenic 45.0%
TGAAACGCGGTTGTTGAGTT+TGG + chr4_4:59812826-59812845 None:intergenic 45.0%
AACTCAACAACCGCGTTTCA+TGG - chr4_4:59812826-59812845 Msa0691600:intron 45.0%
! TTTTCTGACGAAGGTTACCG+CGG + chr4_4:59813000-59813019 None:intergenic 45.0%
! CTTGCCAAGTTTTCTGACGA+AGG + chr4_4:59813009-59813028 None:intergenic 45.0%
TCGTCAGAAAACTTGGCAAG+AGG - chr4_4:59813009-59813028 Msa0691600:CDS 45.0%
! TCGGTTTTTGCACTGAACGT+CGG + chr4_4:59813089-59813108 None:intergenic 45.0%
ACTCGTCTTGACGTTCTCAT+CGG - chr4_4:59813196-59813215 Msa0691600:CDS 45.0%
! TCTCATCGGCGATACTTTTC+CGG - chr4_4:59813210-59813229 Msa0691600:CDS 45.0%
TGGATAATCTCTCATCCGGT+CGG - chr4_4:59813340-59813359 Msa0691600:CDS 45.0%
! ACGTTTTTGTGTTCCGGATC+GGG + chr4_4:59813368-59813387 None:intergenic 45.0%
! GACGTTTTTGTGTTCCGGAT+CGG + chr4_4:59813369-59813388 None:intergenic 45.0%
ATCCGGAACACAAAAACGTC+CGG - chr4_4:59813369-59813388 Msa0691600:CDS 45.0%
AACACAAAAACGTCCGGCAA+TGG - chr4_4:59813375-59813394 Msa0691600:CDS 45.0%
!! AAAGAGACGAAGCATCGTTC+CGG - chr4_4:59813401-59813420 Msa0691600:CDS 45.0%
AAAGTGTGGAGTCAGAGGAA+TGG - chr4_4:59813473-59813492 Msa0691600:CDS 45.0%
AGAAAACGATGGGACCCATA+AGG - chr4_4:59813513-59813532 Msa0691600:CDS 45.0%
GCAGTTATACATGGAAACGC+AGG - chr4_4:59813678-59813697 Msa0691600:CDS 45.0%
AAACGCACTAAACGTGCTTC+TGG - chr4_4:59813718-59813737 Msa0691600:CDS 45.0%
!! ACTAAACGTGCTTCTGGTTC+CGG - chr4_4:59813724-59813743 Msa0691600:CDS 45.0%
!! ACGAGAGTCGTTTTACCGTG+CGG + chr4_4:59812738-59812757 None:intergenic 50.0%
!!! TTGAGTTTTTGGTCGGCGGA+CGG + chr4_4:59812788-59812807 None:intergenic 50.0%
!!! ACGGTTGAGTTTTTGGTCGG+CGG + chr4_4:59812792-59812811 None:intergenic 50.0%
!!! CGGACGGTTGAGTTTTTGGT+CGG + chr4_4:59812795-59812814 None:intergenic 50.0%
! TCGACGGACGGTTGAGTTTT+TGG + chr4_4:59812799-59812818 None:intergenic 50.0%
GCGATGATGTCCATGAAACG+CGG + chr4_4:59812839-59812858 None:intergenic 50.0%
CGTTTCATGGACATCATCGC+CGG - chr4_4:59812839-59812858 Msa0691600:intron 50.0%
!! GGAACGGAGTTGATAGGTGA+CGG + chr4_4:59812869-59812888 None:intergenic 50.0%
ACGTCGCGCTTTCTTGTTAC+CGG + chr4_4:59813065-59813084 None:intergenic 50.0%
AGACGAGTGAAAAACGGCCA+GGG + chr4_4:59813184-59813203 None:intergenic 50.0%
AAGACGAGTGAAAAACGGCC+AGG + chr4_4:59813185-59813204 None:intergenic 50.0%
GGAGTAGACCGTACATTCAC+CGG + chr4_4:59813253-59813272 None:intergenic 50.0%
TGGAGGTTGACGTTTGACGA+CGG + chr4_4:59813278-59813297 None:intergenic 50.0%
GGATGAGAGATTATCCACGC+CGG + chr4_4:59813337-59813356 None:intergenic 50.0%
GGCGTGGATAATCTCTCATC+CGG - chr4_4:59813336-59813355 Msa0691600:CDS 50.0%
! CGTTTTTGTGTTCCGGATCG+GGG + chr4_4:59813367-59813386 None:intergenic 50.0%
! TGCCGGACGTTTTTGTGTTC+CGG + chr4_4:59813374-59813393 None:intergenic 50.0%
! TCGTCTCTTTTCGCCATTGC+CGG + chr4_4:59813391-59813410 None:intergenic 50.0%
ATCGTTCCGGCGGAATTTCT+CGG - chr4_4:59813414-59813433 Msa0691600:CDS 50.0%
TGTGGAGTCAGAGGAATGGA+GGG - chr4_4:59813477-59813496 Msa0691600:CDS 50.0%
GATGGGACCCATAAGGAGTT+TGG - chr4_4:59813520-59813539 Msa0691600:CDS 50.0%
TGGTGGAATTGGAGAAGCAG+AGG - chr4_4:59813620-59813639 Msa0691600:CDS 50.0%
GCAGAGGATGCAGTTTGTGA+AGG - chr4_4:59813636-59813655 Msa0691600:CDS 50.0%
TGGTTGCTTGCAGCAGAAGT+TGG - chr4_4:59813874-59813893 Msa0691600:five_prime_UTR 50.0%
GGTTGCTTGCAGCAGAAGTT+GGG - chr4_4:59813875-59813894 Msa0691600:five_prime_UTR 50.0%
!! ACGAGAGTCGTTTTACCGTG+CGG + chr4_4:59812738-59812757 None:intergenic 50.0%
!!! TTGAGTTTTTGGTCGGCGGA+CGG + chr4_4:59812788-59812807 None:intergenic 50.0%
!!! ACGGTTGAGTTTTTGGTCGG+CGG + chr4_4:59812792-59812811 None:intergenic 50.0%
!!! CGGACGGTTGAGTTTTTGGT+CGG + chr4_4:59812795-59812814 None:intergenic 50.0%
! TCGACGGACGGTTGAGTTTT+TGG + chr4_4:59812799-59812818 None:intergenic 50.0%
GCGATGATGTCCATGAAACG+CGG + chr4_4:59812839-59812858 None:intergenic 50.0%
CGTTTCATGGACATCATCGC+CGG - chr4_4:59812839-59812858 Msa0691600:intron 50.0%
!! GGAACGGAGTTGATAGGTGA+CGG + chr4_4:59812869-59812888 None:intergenic 50.0%
ACGTCGCGCTTTCTTGTTAC+CGG + chr4_4:59813065-59813084 None:intergenic 50.0%
AGACGAGTGAAAAACGGCCA+GGG + chr4_4:59813184-59813203 None:intergenic 50.0%
AAGACGAGTGAAAAACGGCC+AGG + chr4_4:59813185-59813204 None:intergenic 50.0%
GGAGTAGACCGTACATTCAC+CGG + chr4_4:59813253-59813272 None:intergenic 50.0%
TGGAGGTTGACGTTTGACGA+CGG + chr4_4:59813278-59813297 None:intergenic 50.0%
GGATGAGAGATTATCCACGC+CGG + chr4_4:59813337-59813356 None:intergenic 50.0%
GGCGTGGATAATCTCTCATC+CGG - chr4_4:59813336-59813355 Msa0691600:CDS 50.0%
! CGTTTTTGTGTTCCGGATCG+GGG + chr4_4:59813367-59813386 None:intergenic 50.0%
! TGCCGGACGTTTTTGTGTTC+CGG + chr4_4:59813374-59813393 None:intergenic 50.0%
! TCGTCTCTTTTCGCCATTGC+CGG + chr4_4:59813391-59813410 None:intergenic 50.0%
ATCGTTCCGGCGGAATTTCT+CGG - chr4_4:59813414-59813433 Msa0691600:CDS 50.0%
TGTGGAGTCAGAGGAATGGA+GGG - chr4_4:59813477-59813496 Msa0691600:CDS 50.0%
GATGGGACCCATAAGGAGTT+TGG - chr4_4:59813520-59813539 Msa0691600:CDS 50.0%
TGGTGGAATTGGAGAAGCAG+AGG - chr4_4:59813620-59813639 Msa0691600:CDS 50.0%
GCAGAGGATGCAGTTTGTGA+AGG - chr4_4:59813636-59813655 Msa0691600:CDS 50.0%
TGGTTGCTTGCAGCAGAAGT+TGG - chr4_4:59813874-59813893 Msa0691600:five_prime_UTR 50.0%
GGTTGCTTGCAGCAGAAGTT+GGG - chr4_4:59813875-59813894 Msa0691600:five_prime_UTR 50.0%
! CAATGTGTTTTCCCCCCGCA+CGG - chr4_4:59812720-59812739 Msa0691600:CDS 55.0%
!! AGAGTCGTTTTACCGTGCGG+GGG + chr4_4:59812735-59812754 None:intergenic 55.0%
!! GAGAGTCGTTTTACCGTGCG+GGG + chr4_4:59812736-59812755 None:intergenic 55.0%
!! CGAGAGTCGTTTTACCGTGC+GGG + chr4_4:59812737-59812756 None:intergenic 55.0%
!! GTTGATAGGTGACGGAGCTC+CGG + chr4_4:59812861-59812880 None:intergenic 55.0%
GAGGGTGGAAGTTGCGTCTT+CGG + chr4_4:59812942-59812961 None:intergenic 55.0%
TCGCGCTTTCTTGTTACCGG+CGG + chr4_4:59813062-59813081 None:intergenic 55.0%
GCTAGGGTTTCCGAATCCGA+CGG - chr4_4:59813145-59813164 Msa0691600:CDS 55.0%
TGAAAAACGGCCAGGGACTC+TGG + chr4_4:59813177-59813196 None:intergenic 55.0%
!!! GGCGGGGAGAGTTTTTTGAC+CGG + chr4_4:59813232-59813251 None:intergenic 55.0%
GGTCAAAAAACTCTCCCCGC+CGG - chr4_4:59813231-59813250 Msa0691600:CDS 55.0%
TAGACCGTACATTCACCGGC+GGG + chr4_4:59813249-59813268 None:intergenic 55.0%
GTAGACCGTACATTCACCGG+CGG + chr4_4:59813250-59813269 None:intergenic 55.0%
GGTTGACGTTTGACGACGGT+TGG + chr4_4:59813274-59813293 None:intergenic 55.0%
TGAGAGATTATCCACGCCGG+AGG + chr4_4:59813334-59813353 None:intergenic 55.0%
! GGCAGAAAGTGTGGAGTCAG+AGG - chr4_4:59813468-59813487 Msa0691600:CDS 55.0%
GTGTGGAGTCAGAGGAATGG+AGG - chr4_4:59813476-59813495 Msa0691600:CDS 55.0%
GTGGAGTCAGAGGAATGGAG+GGG - chr4_4:59813478-59813497 Msa0691600:CDS 55.0%
TGGAGTCAGAGGAATGGAGG+GGG - chr4_4:59813479-59813498 Msa0691600:CDS 55.0%
GAGGAATGGAGGGGGAAGAA+AGG - chr4_4:59813487-59813506 Msa0691600:CDS 55.0%
TGGTTTCAGAGAGCTCGCTC+AGG - chr4_4:59813540-59813559 Msa0691600:CDS 55.0%
! CAATGTGTTTTCCCCCCGCA+CGG - chr4_4:59812720-59812739 Msa0691600:CDS 55.0%
!! AGAGTCGTTTTACCGTGCGG+GGG + chr4_4:59812735-59812754 None:intergenic 55.0%
!! GAGAGTCGTTTTACCGTGCG+GGG + chr4_4:59812736-59812755 None:intergenic 55.0%
!! CGAGAGTCGTTTTACCGTGC+GGG + chr4_4:59812737-59812756 None:intergenic 55.0%
!! GTTGATAGGTGACGGAGCTC+CGG + chr4_4:59812861-59812880 None:intergenic 55.0%
GAGGGTGGAAGTTGCGTCTT+CGG + chr4_4:59812942-59812961 None:intergenic 55.0%
TCGCGCTTTCTTGTTACCGG+CGG + chr4_4:59813062-59813081 None:intergenic 55.0%
GCTAGGGTTTCCGAATCCGA+CGG - chr4_4:59813145-59813164 Msa0691600:CDS 55.0%
TGAAAAACGGCCAGGGACTC+TGG + chr4_4:59813177-59813196 None:intergenic 55.0%
!!! GGCGGGGAGAGTTTTTTGAC+CGG + chr4_4:59813232-59813251 None:intergenic 55.0%
GGTCAAAAAACTCTCCCCGC+CGG - chr4_4:59813231-59813250 Msa0691600:CDS 55.0%
TAGACCGTACATTCACCGGC+GGG + chr4_4:59813249-59813268 None:intergenic 55.0%
GTAGACCGTACATTCACCGG+CGG + chr4_4:59813250-59813269 None:intergenic 55.0%
GGTTGACGTTTGACGACGGT+TGG + chr4_4:59813274-59813293 None:intergenic 55.0%
TGAGAGATTATCCACGCCGG+AGG + chr4_4:59813334-59813353 None:intergenic 55.0%
! GGCAGAAAGTGTGGAGTCAG+AGG - chr4_4:59813468-59813487 Msa0691600:CDS 55.0%
GTGTGGAGTCAGAGGAATGG+AGG - chr4_4:59813476-59813495 Msa0691600:CDS 55.0%
GTGGAGTCAGAGGAATGGAG+GGG - chr4_4:59813478-59813497 Msa0691600:CDS 55.0%
TGGAGTCAGAGGAATGGAGG+GGG - chr4_4:59813479-59813498 Msa0691600:CDS 55.0%
GAGGAATGGAGGGGGAAGAA+AGG - chr4_4:59813487-59813506 Msa0691600:CDS 55.0%
TGGTTTCAGAGAGCTCGCTC+AGG - chr4_4:59813540-59813559 Msa0691600:CDS 55.0%
!! GAGTCGTTTTACCGTGCGGG+GGG + chr4_4:59812734-59812753 None:intergenic 60.0%
!!! AGTTTTTGGTCGGCGGACGG+AGG + chr4_4:59812785-59812804 None:intergenic 60.0%
CTTCGGTCCAGCAGTCTTCG+CGG + chr4_4:59812925-59812944 None:intergenic 60.0%
TTCCACCCTCATCGACGCCT+GGG - chr4_4:59812952-59812971 Msa0691600:CDS 60.0%
!! TTCACCCCAGGCGTCGATGA+GGG + chr4_4:59812960-59812979 None:intergenic 60.0%
GACGAAGGTTACCGCGGTTG+AGG + chr4_4:59812994-59813013 None:intergenic 60.0%
CTTTCTTGTTACCGGCGGCG+TGG + chr4_4:59813057-59813076 None:intergenic 60.0%
AGGGTTTCCGAATCCGACGG+CGG - chr4_4:59813148-59813167 Msa0691600:CDS 60.0%
CTGGTAACCGCCGTCGGATT+CGG + chr4_4:59813158-59813177 None:intergenic 60.0%
TCTCCCCGCCGGTGAATGTA+CGG - chr4_4:59813242-59813261 Msa0691600:CDS 60.0%
AGACCGTACATTCACCGGCG+GGG + chr4_4:59813248-59813267 None:intergenic 60.0%
ATTATCCACGCCGGAGGCGA+CGG + chr4_4:59813328-59813347 None:intergenic 60.0%
!! GAGACGAAGCATCGTTCCGG+CGG - chr4_4:59813404-59813423 Msa0691600:CDS 60.0%
CGAACGCCGAGAAATTCCGC+CGG + chr4_4:59813423-59813442 None:intergenic 60.0%
GCGGAATTTCTCGGCGTTCG+CGG - chr4_4:59813423-59813442 Msa0691600:CDS 60.0%
GAATTTCTCGGCGTTCGCGG+CGG - chr4_4:59813426-59813445 Msa0691600:CDS 60.0%
!! GAGTCGTTTTACCGTGCGGG+GGG + chr4_4:59812734-59812753 None:intergenic 60.0%
!!! AGTTTTTGGTCGGCGGACGG+AGG + chr4_4:59812785-59812804 None:intergenic 60.0%
CTTCGGTCCAGCAGTCTTCG+CGG + chr4_4:59812925-59812944 None:intergenic 60.0%
TTCCACCCTCATCGACGCCT+GGG - chr4_4:59812952-59812971 Msa0691600:CDS 60.0%
!! TTCACCCCAGGCGTCGATGA+GGG + chr4_4:59812960-59812979 None:intergenic 60.0%
GACGAAGGTTACCGCGGTTG+AGG + chr4_4:59812994-59813013 None:intergenic 60.0%
CTTTCTTGTTACCGGCGGCG+TGG + chr4_4:59813057-59813076 None:intergenic 60.0%
AGGGTTTCCGAATCCGACGG+CGG - chr4_4:59813148-59813167 Msa0691600:CDS 60.0%
CTGGTAACCGCCGTCGGATT+CGG + chr4_4:59813158-59813177 None:intergenic 60.0%
TCTCCCCGCCGGTGAATGTA+CGG - chr4_4:59813242-59813261 Msa0691600:CDS 60.0%
AGACCGTACATTCACCGGCG+GGG + chr4_4:59813248-59813267 None:intergenic 60.0%
ATTATCCACGCCGGAGGCGA+CGG + chr4_4:59813328-59813347 None:intergenic 60.0%
!! GAGACGAAGCATCGTTCCGG+CGG - chr4_4:59813404-59813423 Msa0691600:CDS 60.0%
CGAACGCCGAGAAATTCCGC+CGG + chr4_4:59813423-59813442 None:intergenic 60.0%
GCGGAATTTCTCGGCGTTCG+CGG - chr4_4:59813423-59813442 Msa0691600:CDS 60.0%
GAATTTCTCGGCGTTCGCGG+CGG - chr4_4:59813426-59813445 Msa0691600:CDS 60.0%
GGCGGACGGAGGCTAACTGA+TGG + chr4_4:59812774-59812793 None:intergenic 65.0%
! CGCGGCGGAACGGAGTTGAT+AGG + chr4_4:59812875-59812894 None:intergenic 65.0%
GATGACGACGGAAGACGCGG+CGG + chr4_4:59812890-59812909 None:intergenic 65.0%
GGCGATGACGACGGAAGACG+CGG + chr4_4:59812893-59812912 None:intergenic 65.0%
ACGGGGAACGGCGATGACGA+CGG + chr4_4:59812902-59812921 None:intergenic 65.0%
CAGTCTTCGCGGACGGGGAA+CGG + chr4_4:59812914-59812933 None:intergenic 65.0%
TCCAGCAGTCTTCGCGGACG+GGG + chr4_4:59812919-59812938 None:intergenic 65.0%
GTCCAGCAGTCTTCGCGGAC+GGG + chr4_4:59812920-59812939 None:intergenic 65.0%
GGTCCAGCAGTCTTCGCGGA+CGG + chr4_4:59812921-59812940 None:intergenic 65.0%
CTTCCACCCTCATCGACGCC+TGG - chr4_4:59812951-59812970 Msa0691600:CDS 65.0%
TCCACCCTCATCGACGCCTG+GGG - chr4_4:59812953-59812972 Msa0691600:CDS 65.0%
!! GTTCACCCCAGGCGTCGATG+AGG + chr4_4:59812961-59812980 None:intergenic 65.0%
GTCGAGGTAGCGTTCACCCC+AGG + chr4_4:59812972-59812991 None:intergenic 65.0%
CGCTACCTCGACCTCAACCG+CGG - chr4_4:59812980-59812999 Msa0691600:CDS 65.0%
GGTTACCGCGGTTGAGGTCG+AGG + chr4_4:59812988-59813007 None:intergenic 65.0%
GTGGACGTCGTTGACGGCGT+CGG + chr4_4:59813038-59813057 None:intergenic 65.0%
GGGACTCTGGTAACCGCCGT+CGG + chr4_4:59813164-59813183 None:intergenic 65.0%
ACGGCGGTTACCAGAGTCCC+TGG - chr4_4:59813164-59813183 Msa0691600:CDS 65.0%
! GGAGAGGGTGGAGATGGTGG+AGG + chr4_4:59813295-59813314 None:intergenic 65.0%
GGTGGAGAGGGTGGAGATGG+TGG + chr4_4:59813298-59813317 None:intergenic 65.0%
GACGGTGGAGAGGGTGGAGA+TGG + chr4_4:59813301-59813320 None:intergenic 65.0%
GACGGTGGAGACGGTGGAGA+GGG + chr4_4:59813310-59813329 None:intergenic 65.0%
GGCGGCTGAGGCAGAAAGTG+TGG - chr4_4:59813459-59813478 Msa0691600:CDS 65.0%
GGCGGACGGAGGCTAACTGA+TGG + chr4_4:59812774-59812793 None:intergenic 65.0%
! CGCGGCGGAACGGAGTTGAT+AGG + chr4_4:59812875-59812894 None:intergenic 65.0%
GATGACGACGGAAGACGCGG+CGG + chr4_4:59812890-59812909 None:intergenic 65.0%
GGCGATGACGACGGAAGACG+CGG + chr4_4:59812893-59812912 None:intergenic 65.0%
ACGGGGAACGGCGATGACGA+CGG + chr4_4:59812902-59812921 None:intergenic 65.0%
CAGTCTTCGCGGACGGGGAA+CGG + chr4_4:59812914-59812933 None:intergenic 65.0%
TCCAGCAGTCTTCGCGGACG+GGG + chr4_4:59812919-59812938 None:intergenic 65.0%
GTCCAGCAGTCTTCGCGGAC+GGG + chr4_4:59812920-59812939 None:intergenic 65.0%
GGTCCAGCAGTCTTCGCGGA+CGG + chr4_4:59812921-59812940 None:intergenic 65.0%
CTTCCACCCTCATCGACGCC+TGG - chr4_4:59812951-59812970 Msa0691600:CDS 65.0%
TCCACCCTCATCGACGCCTG+GGG - chr4_4:59812953-59812972 Msa0691600:CDS 65.0%
!! GTTCACCCCAGGCGTCGATG+AGG + chr4_4:59812961-59812980 None:intergenic 65.0%
GTCGAGGTAGCGTTCACCCC+AGG + chr4_4:59812972-59812991 None:intergenic 65.0%
CGCTACCTCGACCTCAACCG+CGG - chr4_4:59812980-59812999 Msa0691600:CDS 65.0%
GGTTACCGCGGTTGAGGTCG+AGG + chr4_4:59812988-59813007 None:intergenic 65.0%
GTGGACGTCGTTGACGGCGT+CGG + chr4_4:59813038-59813057 None:intergenic 65.0%
GGGACTCTGGTAACCGCCGT+CGG + chr4_4:59813164-59813183 None:intergenic 65.0%
ACGGCGGTTACCAGAGTCCC+TGG - chr4_4:59813164-59813183 Msa0691600:CDS 65.0%
! GGAGAGGGTGGAGATGGTGG+AGG + chr4_4:59813295-59813314 None:intergenic 65.0%
GGTGGAGAGGGTGGAGATGG+TGG + chr4_4:59813298-59813317 None:intergenic 65.0%
GACGGTGGAGAGGGTGGAGA+TGG + chr4_4:59813301-59813320 None:intergenic 65.0%
GACGGTGGAGACGGTGGAGA+GGG + chr4_4:59813310-59813329 None:intergenic 65.0%
GGCGGCTGAGGCAGAAAGTG+TGG - chr4_4:59813459-59813478 Msa0691600:CDS 65.0%
CGACGGAAGACGCGGCGGAA+CGG + chr4_4:59812885-59812904 None:intergenic 70.0%
TCCCCGTCCGCGAAGACTGC+TGG - chr4_4:59812915-59812934 Msa0691600:CDS 70.0%
!! ACCCCAGGCGTCGATGAGGG+TGG + chr4_4:59812957-59812976 None:intergenic 70.0%
GGCGGCGTGGACGTCGTTGA+CGG + chr4_4:59813044-59813063 None:intergenic 70.0%
GTCAACGACGTCCACGCCGC+CGG - chr4_4:59813043-59813062 Msa0691600:CDS 70.0%
GGTGGAGACGGTGGAGAGGG+TGG + chr4_4:59813307-59813326 None:intergenic 70.0%
CGACGGTGGAGACGGTGGAG+AGG + chr4_4:59813311-59813330 None:intergenic 70.0%
ACCGTCTCCACCGTCGCCTC+CGG - chr4_4:59813315-59813334 Msa0691600:CDS 70.0%
CATCCGGTCGGTCCCCGATC+CGG - chr4_4:59813352-59813371 Msa0691600:CDS 70.0%
GTTCCGGATCGGGGACCGAC+CGG + chr4_4:59813358-59813377 None:intergenic 70.0%
CGACGGAAGACGCGGCGGAA+CGG + chr4_4:59812885-59812904 None:intergenic 70.0%
TCCCCGTCCGCGAAGACTGC+TGG - chr4_4:59812915-59812934 Msa0691600:CDS 70.0%
!! ACCCCAGGCGTCGATGAGGG+TGG + chr4_4:59812957-59812976 None:intergenic 70.0%
GGCGGCGTGGACGTCGTTGA+CGG + chr4_4:59813044-59813063 None:intergenic 70.0%
GTCAACGACGTCCACGCCGC+CGG - chr4_4:59813043-59813062 Msa0691600:CDS 70.0%
GGTGGAGACGGTGGAGAGGG+TGG + chr4_4:59813307-59813326 None:intergenic 70.0%
CGACGGTGGAGACGGTGGAG+AGG + chr4_4:59813311-59813330 None:intergenic 70.0%
ACCGTCTCCACCGTCGCCTC+CGG - chr4_4:59813315-59813334 Msa0691600:CDS 70.0%
CATCCGGTCGGTCCCCGATC+CGG - chr4_4:59813352-59813371 Msa0691600:CDS 70.0%
GTTCCGGATCGGGGACCGAC+CGG + chr4_4:59813358-59813377 None:intergenic 70.0%
GGAGGCGACGGTGGAGACGG+TGG + chr4_4:59813316-59813335 None:intergenic 75.0%
GCCGGAGGCGACGGTGGAGA+CGG + chr4_4:59813319-59813338 None:intergenic 75.0%
ATCCACGCCGGAGGCGACGG+TGG + chr4_4:59813325-59813344 None:intergenic 75.0%
GGAGGCGACGGTGGAGACGG+TGG + chr4_4:59813316-59813335 None:intergenic 75.0%
GCCGGAGGCGACGGTGGAGA+CGG + chr4_4:59813319-59813338 None:intergenic 75.0%
ATCCACGCCGGAGGCGACGG+TGG + chr4_4:59813325-59813344 None:intergenic 75.0%
! CTCCACCGTCGCCTCCGGCG+TGG - chr4_4:59813320-59813339 Msa0691600:CDS 80.0%
! GGCGTTCGCGGCGGCTGCTG+CGG - chr4_4:59813435-59813454 Msa0691600:CDS 80.0%
! GTTCGCGGCGGCTGCTGCGG+CGG - chr4_4:59813438-59813457 Msa0691600:CDS 80.0%
! CTCCACCGTCGCCTCCGGCG+TGG - chr4_4:59813320-59813339 Msa0691600:CDS 80.0%
! GGCGTTCGCGGCGGCTGCTG+CGG - chr4_4:59813435-59813454 Msa0691600:CDS 80.0%
! GTTCGCGGCGGCTGCTGCGG+CGG - chr4_4:59813438-59813457 Msa0691600:CDS 80.0%
! GGCTGCTGCGGCGGCGGCTG+AGG - chr4_4:59813447-59813466 Msa0691600:CDS 85.0%
! GGCTGCTGCGGCGGCGGCTG+AGG - chr4_4:59813447-59813466 Msa0691600:CDS 85.0%
! CGCGGCGGCTGCTGCGGCGG+CGG - chr4_4:59813441-59813460 Msa0691600:CDS 90.0%
! CGCGGCGGCTGCTGCGGCGG+CGG - chr4_4:59813441-59813460 Msa0691600:CDS 90.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 59812716 59813927 59812716 ID=Msa0691600;Name=Msa0691600
chr4_4 mRNA 59812716 59813927 59812716 ID=Msa0691600-mRNA-1;Parent=Msa0691600;Name=Msa0691600-mRNA-1;_AED=0.13;_eAED=0.13;_QI=129|0|0.5|0.5|1|1|2|0|313
chr4_4 exon 59812716 59812756 59812716 ID=Msa0691600-mRNA-1:exon:16330;Parent=Msa0691600-mRNA-1
chr4_4 exon 59812898 59813927 59812898 ID=Msa0691600-mRNA-1:exon:16329;Parent=Msa0691600-mRNA-1
chr4_4 five_prime_UTR 59813799 59813927 59813799 ID=Msa0691600-mRNA-1:five_prime_utr;Parent=Msa0691600-mRNA-1
chr4_4 CDS 59812898 59813798 59812898 ID=Msa0691600-mRNA-1:cds;Parent=Msa0691600-mRNA-1
chr4_4 CDS 59812716 59812756 59812716 ID=Msa0691600-mRNA-1:cds;Parent=Msa0691600-mRNA-1
Gene Sequence

>Msa0691600

ATGGACATCATCGCCGGAGCTCCGTCACCTATCAACTCCGTTCCGCCGCGTCTTCCGTCGTCATCGCCGTTCCCCGTCCGCGAAGACTGCTGGACCGAAGACGCAACTTCCACCCTCATCGACGCCTGGGGTGAACGCTACCTCGACCTCAACCGCGGTAACCTTCGTCAGAAAACTTGGCAAGAGGTTGCCGACGCCGTCAACGACGTCCACGCCGCCGGTAACAAGAAAGCGCGACGTACCGACGTTCAGTGCAAAAACCGAATCGACACGTTAAAGAAGAAGTACAAGATCGAGAAAGCTAGGGTTTCCGAATCCGACGGCGGTTACCAGAGTCCCTGGCCGTTTTTCACTCGTCTTGACGTTCTCATCGGCGATACTTTTCCGGTCAAAAAACTCTCCCCGCCGGTGAATGTACGGTCTACTCCAACCGTCGTCAAACGTCAACCTCCACCATCTCCACCCTCTCCACCGTCTCCACCGTCGCCTCCGGCGTGGATAATCTCTCATCCGGTCGGTCCCCGATCCGGAACACAAAAACGTCCGGCAATGGCGAAAAGAGACGAAGCATCGTTCCGGCGGAATTTCTCGGCGTTCGCGGCGGCTGCTGCGGCGGCGGCTGAGGCAGAAAGTGTGGAGTCAGAGGAATGGAGGGGGAAGAAAGGAAGAGAAAACGATGGGACCCATAAGGAGTTTGGTTTCAGAGAGCTCGCTCAGGCTATAGAGAGATTCAGTGAAGTATATGAAAGAGTTGAAGCTTCAAAACAGAGACAAATGGTGGAATTGGAGAAGCAGAGGATGCAGTTTGTGAAGGATTTGGAGTATCAGAGAATGCAGTTATACATGGAAACGCAGGTTCAGCTTCAGAAAATCAAACGCACTAAACGTGCTTCTGGTTCCGCAGAAGTTGGGTATTTTGTTACTTGTGATAATGGTAACTGA
Protein sequence

>Msa0691600

MDIIAGAPSPINSVPPRLPSSSPFPVREDCWTEDATSTLIDAWGERYLDLNRGNLRQKTWQEVADAVNDVHAAGNKKARRTDVQCKNRIDTLKKKYKIEKARVSESDGGYQSPWPFFTRLDVLIGDTFPVKKLSPPVNVRSTPTVVKRQPPPSPPSPPSPPSPPAWIISHPVGPRSGTQKRPAMAKRDEASFRRNFSAFAAAAAAAAEAESVESEEWRGKKGRENDGTHKEFGFRELAQAIERFSEVYERVEASKQRQMVELEKQRMQFVKDLEYQRMQLYMETQVQLQKIKRTKRASGSAEVGYFVTCDNGN*