AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0692370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692370 MtrunA17_Chr4g0042671 93.735 415 7 4 1 405 1 406 0.0 772
Msa0692370 MtrunA17_Chr4g0042621 91.463 328 8 4 89 405 15 333 0.0 579
Msa0692370 MtrunA17_Chr6g0453471 85.799 169 24 0 1 169 1 169 3.34e-106 317
Msa0692370 MtrunA17_Chr7g0217741 76.596 188 40 2 1 188 1 184 7.97e-101 302
Msa0692370 MtrunA17_Chr8g0349261 64.972 177 48 5 1 170 1 170 1.83e-75 236
Msa0692370 MtrunA17_Chr3g0115821 59.677 186 66 2 1 180 1 183 2.52e-74 235
Msa0692370 MtrunA17_Chr2g0281071 77.692 130 28 1 1 129 1 130 1.56e-73 233
Msa0692370 MtrunA17_Chr4g0048511 75.758 132 31 1 1 131 1 132 3.39e-73 233
Msa0692370 MtrunA17_Chr4g0039971 56.545 191 80 3 1 189 2 191 6.45e-72 229
Msa0692370 MtrunA17_Chr2g0323411 75.000 132 33 0 1 132 1 132 1.80e-71 227
Msa0692370 MtrunA17_Chr1g0203411 61.272 173 57 2 1 172 1 164 4.07e-69 220
Msa0692370 MtrunA17_Chr5g0417821 65.161 155 47 1 10 164 5 152 1.12e-68 219
Msa0692370 MtrunA17_Chr5g0410961 70.455 132 39 0 1 132 1 132 1.43e-68 220
Msa0692370 MtrunA17_Chr5g0395281 68.182 132 42 0 1 132 1 132 4.09e-65 210
Msa0692370 MtrunA17_Chr5g0434571 71.875 128 36 0 1 128 37 164 1.06e-62 205
Msa0692370 MtrunA17_Chr4g0057031 69.531 128 39 0 1 128 1 128 1.14e-62 202
Msa0692370 MtrunA17_Chr3g0110351 71.654 127 36 0 1 127 1 127 2.31e-62 203
Msa0692370 MtrunA17_Chr4g0037141 63.571 140 51 0 1 140 1 140 3.78e-62 202
Msa0692370 MtrunA17_Chr1g0193371 71.094 128 37 0 1 128 1 128 5.77e-62 204
Msa0692370 MtrunA17_Chr1g0193801 68.750 128 40 0 1 128 1 128 7.45e-62 204
Msa0692370 MtrunA17_Chr3g0103281 69.531 128 39 0 1 128 1 128 7.58e-62 202
Msa0692370 MtrunA17_Chr7g0270891 56.213 169 67 2 1 164 1 167 4.50e-61 201
Msa0692370 MtrunA17_Chr4g0058631 68.750 128 40 0 1 128 1 128 7.82e-61 201
Msa0692370 MtrunA17_Chr7g0274581 67.797 118 38 0 1 118 1 118 7.89e-61 196
Msa0692370 MtrunA17_Chr3g0131121 63.504 137 50 0 1 137 1 137 2.35e-60 197
Msa0692370 MtrunA17_Chr8g0385321 66.406 128 43 0 1 128 1 128 7.06e-60 197
Msa0692370 MtrunA17_Chr1g0187761 62.676 142 50 1 1 139 1 142 1.39e-59 194
Msa0692370 MtrunA17_Chr7g0261281 73.276 116 31 0 1 116 1 116 1.81e-59 194
Msa0692370 MtrunA17_Chr1g0167661 75.000 116 29 0 1 116 1 116 4.71e-59 192
Msa0692370 MtrunA17_Chr6g0452271 56.954 151 56 1 1 151 1 142 7.66e-59 195
Msa0692370 MtrunA17_Chr3g0117091 67.969 128 41 0 1 128 1 128 1.10e-58 195
Msa0692370 MtrunA17_Chr1g0167691 73.276 116 31 0 1 116 1 116 1.23e-58 191
Msa0692370 MtrunA17_Chr7g0228891 66.406 128 43 0 1 128 1 128 1.33e-58 192
Msa0692370 MtrunA17_Chr3g0121241 67.742 124 40 0 5 128 35 158 3.05e-58 192
Msa0692370 MtrunA17_Chr7g0217221 71.186 118 34 0 1 118 1 118 4.42e-58 191
Msa0692370 MtrunA17_Chr7g0271241 70.312 128 38 0 1 128 1 128 5.28e-58 194
Msa0692370 MtrunA17_Chr7g0254411 67.460 126 39 1 1 124 1 126 6.11e-58 192
Msa0692370 MtrunA17_Chr5g0435101 64.000 125 45 0 3 127 2 126 1.01e-57 188
Msa0692370 MtrunA17_Chr4g0060721 66.949 118 39 0 1 118 2 119 6.67e-57 189
Msa0692370 MtrunA17_Chr3g0092401 68.067 119 38 0 1 119 2 120 6.80e-57 189
Msa0692370 MtrunA17_Chr1g0211161 66.667 126 42 0 3 128 4 129 9.32e-57 186
Msa0692370 MtrunA17_Chr4g0068061 68.966 116 36 0 1 116 1 116 2.21e-56 188
Msa0692370 MtrunA17_Chr4g0042611 94.318 88 5 0 1 88 1 88 3.90e-56 179
Msa0692370 MtrunA17_Chr8g0346561 62.687 134 48 1 1 132 1 134 1.02e-55 186
Msa0692370 MtrunA17_Chr2g0311221 69.091 110 34 0 2 111 4 113 2.76e-55 185
Msa0692370 MtrunA17_Chr7g0275911 67.241 116 38 0 1 116 1 116 1.08e-54 181
Msa0692370 MtrunA17_Chr7g0247131 66.667 129 41 1 44 172 10 136 1.87e-54 181
Msa0692370 MtrunA17_Chr2g0309911 63.636 121 44 0 6 126 5 125 2.13e-54 182
Msa0692370 MtrunA17_Chr2g0323351 67.797 118 38 0 1 118 1 118 4.53e-54 179
Msa0692370 MtrunA17_Chr8g0342521 56.028 141 62 0 1 141 1 141 8.31e-54 182
Msa0692370 MtrunA17_Chr1g0194951 62.791 129 48 0 1 129 1 129 1.31e-53 182
Msa0692370 MtrunA17_Chr6g0453211 70.270 111 33 0 1 111 1 111 4.14e-53 179
Msa0692370 MtrunA17_Chr4g0070611 68.103 116 37 0 1 116 1 116 2.26e-52 177
Msa0692370 MtrunA17_Chr2g0330041 60.800 125 49 0 1 125 1 125 2.94e-52 179
Msa0692370 MtrunA17_Chr8g0342541 56.716 134 58 0 1 134 1 134 3.16e-52 178
Msa0692370 MtrunA17_Chr4g0070641 68.103 116 37 0 1 116 1 116 6.33e-52 171
Msa0692370 MtrunA17_Chr4g0028311 61.832 131 48 2 1 130 1 130 8.21e-52 176
Msa0692370 MtrunA17_Chr4g0032401 55.556 144 57 1 12 148 17 160 2.43e-51 175
Msa0692370 MtrunA17_Chr5g0400821 66.667 117 38 1 1 116 1 117 6.50e-51 173
Msa0692370 MtrunA17_Chr4g0022931 64.957 117 40 1 1 116 1 117 9.58e-51 172
Msa0692370 MtrunA17_Chr1g0152011 65.812 117 39 1 1 116 1 117 1.40e-50 173
Msa0692370 MtrunA17_Chr8g0387421 61.017 118 46 0 1 118 1 118 2.05e-50 172
Msa0692370 MtrunA17_Chr4g0022901 56.338 142 57 2 1 141 1 138 2.06e-50 171
Msa0692370 MtrunA17_Chr4g0044421 61.600 125 47 1 3 126 2 126 3.21e-50 167
Msa0692370 MtrunA17_Chr4g0022911 62.931 116 42 1 1 115 1 116 1.09e-49 169
Msa0692370 MtrunA17_Chr7g0264641 59.542 131 51 2 1 130 1 130 1.18e-49 169
Msa0692370 MtrunA17_Chr3g0135311 64.103 117 41 1 1 116 1 117 2.60e-49 170
Msa0692370 MtrunA17_Chr1g0151941 60.684 117 45 1 1 116 1 117 4.18e-49 167
Msa0692370 MtrunA17_Chr2g0327351 67.568 111 35 1 1 110 1 111 4.24e-49 169
Msa0692370 MtrunA17_Chr5g0397231 63.636 110 40 0 1 110 1 110 1.73e-48 167
Msa0692370 MtrunA17_Chr7g0269831 63.492 126 46 0 1 126 1 126 2.12e-48 168
Msa0692370 MtrunA17_Chr2g0328771 60.163 123 48 1 12 134 20 141 1.66e-47 164
Msa0692370 MtrunA17_Chr1g0203441 62.712 118 43 1 13 130 14 130 3.52e-47 162
Msa0692370 MtrunA17_Chr4g0054391 64.545 110 38 1 1 109 1 110 1.70e-46 161
Msa0692370 MtrunA17_Chr8g0342481 52.482 141 66 1 1 140 1 141 2.70e-46 164
Msa0692370 MtrunA17_Chr3g0088461 66.667 108 36 0 9 116 19 126 4.01e-46 162
Msa0692370 MtrunA17_Chr4g0072751 64.865 111 38 1 1 110 1 111 5.21e-46 161
Msa0692370 MtrunA17_Chr4g0022881 61.404 114 44 0 1 114 1 114 6.49e-46 157
Msa0692370 MtrunA17_Chr6g0470971 55.303 132 58 1 7 138 9 139 1.83e-43 153
Msa0692370 MtrunA17_Chr6g0487491 56.349 126 46 2 1 117 1 126 4.42e-43 151
Msa0692370 MtrunA17_Chr2g0294811 71.591 88 25 0 1 88 1 88 7.08e-43 146
Msa0692370 MtrunA17_Chr4g0022891 57.522 113 48 0 1 113 1 113 8.38e-43 150
Msa0692370 MtrunA17_Chr4g0055981 52.482 141 63 1 9 145 52 192 3.97e-42 148
Msa0692370 MtrunA17_Chr1g0186061 62.136 103 39 0 13 115 21 123 8.58e-41 145
Msa0692370 MtrunA17_Chr3g0080861 58.929 112 45 1 10 121 35 145 1.44e-40 150
Msa0692370 MtrunA17_Chr8g0354661 58.929 112 45 1 10 121 35 145 5.51e-40 149
Msa0692370 MtrunA17_Chr1g0168661 62.136 103 39 0 13 115 22 124 5.99e-40 143
Msa0692370 MtrunA17_Chr1g0209661 54.167 120 55 0 8 127 23 142 9.23e-40 144
Msa0692370 MtrunA17_Chr3g0099131 59.091 110 44 1 12 121 41 149 1.28e-39 148
Msa0692370 MtrunA17_Chr1g0194291 54.545 121 55 0 2 122 11 131 2.00e-39 142
Msa0692370 MtrunA17_Chr5g0434911 55.856 111 49 0 7 117 16 126 2.29e-39 142
Msa0692370 MtrunA17_Chr5g0434931 57.009 107 46 0 11 117 34 140 4.07e-39 141
Msa0692370 MtrunA17_Chr7g0240821 53.448 116 54 0 16 131 5 120 4.30e-39 140
Msa0692370 MtrunA17_Chr7g0228231 58.879 107 44 0 12 118 14 120 5.22e-39 139
Msa0692370 MtrunA17_Chr1g0154031 56.731 104 45 0 12 115 76 179 9.25e-39 144
Msa0692370 MtrunA17_Chr7g0220341 58.182 110 44 1 10 117 23 132 9.40e-39 140
Msa0692370 MtrunA17_Chr8g0343831 57.627 118 46 1 1 118 1 114 1.26e-38 139
Msa0692370 MtrunA17_Chr6g0450101 52.893 121 55 1 1 119 1 121 1.67e-38 137
Msa0692370 MtrunA17_Chr1g0194301 51.695 118 57 0 12 129 33 150 2.51e-38 139
Msa0692370 MtrunA17_Chr2g0322521 57.522 113 47 1 9 121 26 137 3.25e-38 142
Msa0692370 MtrunA17_Chr1g0180391 57.143 105 45 0 12 116 19 123 5.59e-38 137
Msa0692370 MtrunA17_Chr8g0342511 63.218 87 32 0 1 87 1 87 3.99e-37 130
Msa0692370 MtrunA17_Chr2g0327821 44.138 145 78 1 12 153 6 150 4.06e-37 135
Msa0692370 MtrunA17_Chr5g0434831 57.547 106 45 0 11 116 6 111 5.55e-37 133
Msa0692370 MtrunA17_Chr7g0228991 56.075 107 47 0 11 117 28 134 5.56e-37 135
Msa0692370 MtrunA17_Chr8g0360111 57.843 102 43 0 11 112 24 125 2.51e-36 133
Msa0692370 MtrunA17_Chr8g0342531 50.000 116 53 1 1 111 1 116 1.00e-35 129
Msa0692370 MtrunA17_Chr5g0434841 55.660 106 47 0 11 116 19 124 2.01e-35 132
Msa0692370 MtrunA17_Chr2g0323321 63.043 92 33 1 1 92 1 91 2.74e-35 126
Msa0692370 MtrunA17_Chr4g0030881 53.636 110 44 1 13 115 8 117 2.76e-35 130
Msa0692370 MtrunA17_Chr5g0395221 64.773 88 31 0 1 88 1 88 6.14e-35 124
Msa0692370 MtrunA17_Chr2g0293911 51.639 122 59 0 8 129 20 141 2.05e-34 130
Msa0692370 MtrunA17_Chr1g0192411 47.934 121 62 1 1 121 1 120 3.38e-34 131
Msa0692370 MtrunA17_Chr4g0068921 50.820 122 60 0 8 129 20 141 7.76e-34 125
Msa0692370 MtrunA17_Chr8g0342471 58.889 90 36 1 1 89 1 90 1.46e-33 122
Msa0692370 MtrunA17_Chr5g0440781 44.776 134 70 3 13 145 13 143 1.80e-33 124
Msa0692370 MtrunA17_Chr5g0440761 44.776 134 70 3 13 145 13 143 3.78e-33 125
Msa0692370 MtrunA17_Chr8g0342461 57.778 90 37 1 1 89 1 90 4.03e-33 121
Msa0692370 MtrunA17_Chr5g0441141 44.776 134 70 3 13 145 13 143 4.34e-33 125
Msa0692370 MtrunA17_Chr8g0334881 47.706 109 55 2 12 119 10 117 3.06e-31 121
Msa0692370 MtrunA17_Chr5g0441131 42.754 138 76 3 10 145 7 143 3.12e-30 115
Msa0692370 MtrunA17_Chr3g0093811 41.509 159 74 3 44 193 14 162 4.13e-30 117
Msa0692370 MtrunA17_Chr4g0013361 43.165 139 73 4 8 143 6 141 7.67e-30 117
Msa0692370 MtrunA17_Chr3g0099141 54.023 87 40 0 8 94 36 122 9.94e-30 112
Msa0692370 MtrunA17_Chr4g0008551 48.673 113 53 2 14 126 38 145 9.86e-29 115
Msa0692370 MtrunA17_Chr5g0401731 44.000 125 68 2 14 137 15 138 5.91e-28 112
Msa0692370 MtrunA17_Chr6g0454921 41.732 127 73 1 14 140 15 140 5.30e-27 107
Msa0692370 MtrunA17_Chr3g0133601 50.980 102 49 1 14 115 37 137 7.94e-27 107
Msa0692370 MtrunA17_Chr4g0053431 40.714 140 75 3 14 146 5 143 1.11e-26 107
Msa0692370 MtrunA17_Chr7g0238631 49.524 105 52 1 12 116 111 214 1.17e-26 112
Msa0692370 MtrunA17_Chr5g0429661 45.794 107 57 1 12 118 120 225 1.57e-26 109
Msa0692370 MtrunA17_Chr7g0229131 56.471 85 36 1 45 129 5 88 6.42e-25 100
Msa0692370 MtrunA17_Chr7g0229101 64.286 70 25 0 44 113 4 73 1.22e-24 100
Msa0692370 MtrunA17_Chr6g0480581 40.310 129 75 2 14 142 4 130 9.87e-24 99.0
Msa0692370 MtrunA17_Chr6g0453751 48.936 94 39 2 11 95 19 112 1.24e-23 95.5
Msa0692370 MtrunA17_Chr4g0058991 41.441 111 64 1 8 118 203 312 4.79e-23 100
Msa0692370 MtrunA17_Chr5g0434901 63.235 68 25 0 46 113 7 74 6.63e-23 93.2
Msa0692370 MtrunA17_Chr3g0117511 36.029 136 79 2 8 143 177 304 3.71e-22 97.8
Msa0692370 MtrunA17_Chr3g0139671 41.905 105 60 1 12 116 83 186 3.98e-22 99.0
Msa0692370 MtrunA17_Chr1g0157731 35.570 149 86 2 12 151 89 236 1.69e-21 97.1
Msa0692370 MtrunA17_Chr7g0228531 40.367 109 63 2 10 118 216 322 5.99e-21 94.4
Msa0692370 MtrunA17_Chr5g0425591 47.126 87 45 1 10 95 7 93 6.45e-21 86.7
Msa0692370 MtrunA17_Chr6g0460671 43.137 102 57 1 14 115 99 199 6.60e-21 93.2
Msa0692370 MtrunA17_Chr5g0437321 43.434 99 55 1 14 112 19 116 7.27e-21 92.0
Msa0692370 MtrunA17_Chr4g0042501 40.000 115 63 2 2 116 98 206 1.16e-20 93.2
Msa0692370 MtrunA17_Chr6g0460661 40.517 116 67 2 14 129 16 129 2.42e-20 87.4
Msa0692370 MtrunA17_Chr5g0417621 39.130 115 64 2 2 116 127 235 3.18e-20 92.0
Msa0692370 MtrunA17_Chr3g0125801 42.718 103 56 2 14 115 16 116 9.23e-20 89.0
Msa0692370 MtrunA17_Chr5g0397841 43.878 98 54 1 12 109 108 204 1.87e-19 90.1
Msa0692370 MtrunA17_Chr7g0254261 41.880 117 63 2 3 115 74 189 1.91e-19 89.0
Msa0692370 MtrunA17_Chr7g0228401 30.675 163 96 4 25 187 290 435 1.54e-18 87.4
Msa0692370 MtrunA17_Chr7g0228481 38.614 101 60 2 10 110 216 314 1.98e-17 83.6
Msa0692370 MtrunA17_Chr7g0238651 38.053 113 66 2 17 125 10 122 2.19e-17 82.8
Msa0692370 MtrunA17_Chr1g0177901 43.023 86 48 1 25 110 5 89 3.98e-17 79.7
Msa0692370 MtrunA17_Chr7g0233061 38.679 106 44 2 14 110 180 273 6.17e-17 81.6
Msa0692370 MtrunA17_Chr5g0395231 58.182 55 23 0 78 132 5 59 8.91e-17 79.3
Msa0692370 MtrunA17_Chr7g0247141 63.830 47 16 1 1 46 1 47 9.53e-16 71.2
Msa0692370 MtrunA17_Chr1g0193901 44.828 87 46 2 12 96 11 97 2.39e-14 68.9
Msa0692370 MtrunA17_Chr1g0193891 44.828 87 46 2 12 96 11 97 2.39e-14 68.9
Msa0692370 MtrunA17_Chr1g0193871 44.828 87 46 2 12 96 11 97 2.39e-14 68.9
Msa0692370 MtrunA17_Chr1g0193881 44.828 87 46 2 12 96 11 97 2.39e-14 68.9
Msa0692370 MtrunA17_Chr5g0416341 38.384 99 60 1 17 115 29 126 9.10e-14 72.8
Msa0692370 MtrunA17_Chr3g0145551 55.172 58 25 1 92 148 2 59 6.29e-13 64.3
Msa0692370 MtrunA17_Chr5g0434871 60.465 43 17 0 74 116 2 44 2.78e-12 62.0
Msa0692370 MtrunA17_Chr8g0362231 35.354 99 63 1 17 115 25 122 3.61e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692370 AT3G01140.2 45.926 405 144 10 1 398 1 337 3.42e-101 304
Msa0692370 AT5G15310.4 77.419 186 40 2 1 186 1 184 2.27e-100 298
Msa0692370 AT5G15310.2 77.419 186 40 2 1 186 1 184 4.93e-100 300
Msa0692370 AT5G15310.1 77.419 186 40 2 1 186 1 184 5.45e-100 301
Msa0692370 AT3G01140.1 45.522 402 144 10 4 398 47 380 7.83e-98 297
Msa0692370 AT3G61250.1 69.231 169 48 1 1 169 1 165 2.61e-82 254
Msa0692370 AT3G02940.2 76.515 132 31 0 1 132 1 132 3.46e-75 236
Msa0692370 AT4G21440.1 76.336 131 31 0 1 131 1 131 6.94e-75 237
Msa0692370 AT3G02940.1 76.515 132 31 0 1 132 1 132 8.30e-75 236
Msa0692370 AT3G02940.3 76.515 132 31 0 1 132 1 132 8.30e-75 236
Msa0692370 AT4G05100.1 78.462 130 27 1 1 129 1 130 1.16e-73 233
Msa0692370 AT5G16770.4 75.758 132 32 0 1 132 1 132 2.10e-73 232
Msa0692370 AT5G16770.3 75.758 132 32 0 1 132 1 132 2.10e-73 232
Msa0692370 AT5G16770.1 75.758 132 32 0 1 132 1 132 6.96e-73 231
Msa0692370 AT5G16770.2 75.758 132 32 0 1 132 1 132 6.96e-73 231
Msa0692370 AT1G34670.1 77.099 131 30 0 1 131 1 131 2.07e-72 231
Msa0692370 AT4G28110.1 66.038 159 54 0 1 159 1 159 1.36e-71 226
Msa0692370 AT5G10280.1 58.989 178 66 2 1 178 1 171 1.26e-69 223
Msa0692370 AT5G65230.1 72.519 131 36 0 1 131 1 131 1.78e-67 216
Msa0692370 AT4G17785.2 67.114 149 47 2 1 147 1 149 2.08e-66 215
Msa0692370 AT4G17785.1 67.114 149 47 2 1 147 1 149 3.47e-66 215
Msa0692370 AT5G61420.2 72.656 128 35 0 1 128 1 128 5.52e-66 214
Msa0692370 AT5G54230.1 74.419 129 33 0 1 129 1 129 1.31e-65 212
Msa0692370 AT5G07690.1 71.875 128 36 0 1 128 1 128 6.49e-65 211
Msa0692370 AT5G60890.1 71.875 128 36 0 1 128 1 128 7.94e-65 209
Msa0692370 AT1G74080.1 68.613 137 43 0 1 137 1 137 1.42e-64 210
Msa0692370 AT4G34990.1 65.068 146 47 1 1 146 1 142 4.03e-64 207
Msa0692370 AT2G31180.1 77.119 118 27 0 1 118 1 118 6.31e-64 205
Msa0692370 AT4G12350.1 71.875 128 36 0 1 128 1 128 8.05e-64 206
Msa0692370 AT4G38620.1 46.977 215 112 1 1 213 1 215 9.34e-64 206
Msa0692370 AT1G18570.1 71.875 128 35 1 1 127 1 128 9.80e-64 208
Msa0692370 AT5G16600.1 72.656 128 35 0 1 128 1 128 1.26e-63 207
Msa0692370 AT4G22680.1 71.094 128 37 0 1 128 1 128 1.33e-63 205
Msa0692370 AT5G07700.1 67.910 134 43 0 1 134 1 134 5.50e-63 206
Msa0692370 AT5G07700.2 67.910 134 43 0 1 134 1 134 5.50e-63 206
Msa0692370 AT1G66230.1 66.906 139 41 1 1 134 1 139 1.76e-62 203
Msa0692370 AT5G56110.1 68.750 128 40 0 1 128 1 128 1.67e-61 201
Msa0692370 AT3G23250.1 65.468 139 47 1 1 138 1 139 2.89e-61 200
Msa0692370 AT4G09460.1 67.717 127 41 0 1 127 1 127 4.78e-61 197
Msa0692370 AT1G35515.1 68.254 126 40 0 1 126 1 126 5.23e-61 196
Msa0692370 AT2G16720.1 66.929 127 42 0 1 127 1 127 5.97e-61 198
Msa0692370 AT1G22640.1 66.929 127 42 0 1 127 1 127 7.42e-61 197
Msa0692370 AT5G26660.1 69.531 128 39 0 1 128 1 128 7.46e-61 201
Msa0692370 AT4G01680.3 69.291 127 39 0 1 127 1 127 8.30e-61 197
Msa0692370 AT5G62470.2 55.621 169 69 3 1 169 1 163 1.84e-60 200
Msa0692370 AT4G01680.1 69.291 127 39 0 1 127 1 127 3.93e-60 198
Msa0692370 AT1G06180.1 76.724 116 27 0 1 116 1 116 6.81e-60 195
Msa0692370 AT3G47600.1 53.801 171 76 2 1 169 1 170 8.49e-60 197
Msa0692370 AT3G13540.1 65.600 125 43 0 4 128 15 139 3.24e-59 193
Msa0692370 AT5G62470.1 55.621 169 68 4 1 169 1 162 1.10e-58 195
Msa0692370 AT1G57560.2 61.151 139 54 0 1 139 1 139 1.27e-58 192
Msa0692370 AT1G57560.1 64.844 128 45 0 1 128 1 128 2.27e-58 193
Msa0692370 AT1G74430.1 67.188 128 42 0 1 128 1 128 3.31e-58 191
Msa0692370 AT1G09540.1 65.625 128 44 0 1 128 1 128 4.80e-58 194
Msa0692370 AT1G74650.1 69.748 119 36 0 1 119 1 119 1.99e-57 191
Msa0692370 AT5G62320.1 63.158 133 42 1 2 127 3 135 2.54e-57 188
Msa0692370 AT1G18710.1 65.152 132 46 0 1 132 1 132 3.48e-57 189
Msa0692370 AT1G79180.1 55.621 169 60 3 2 170 4 157 6.83e-57 189
Msa0692370 AT1G08810.1 66.393 122 41 0 1 122 1 122 7.87e-57 188
Msa0692370 AT4G01680.2 63.309 139 39 1 1 127 1 139 1.23e-56 190
Msa0692370 AT5G14340.1 57.343 143 61 0 1 143 13 155 9.61e-56 185
Msa0692370 AT3G28910.1 67.213 122 40 0 1 122 1 122 1.66e-55 186
Msa0692370 AT1G16490.1 66.379 116 39 0 2 117 4 119 1.24e-54 182
Msa0692370 AT5G49330.1 67.241 116 38 0 1 116 1 116 3.03e-54 183
Msa0692370 AT3G62610.1 64.000 125 45 0 1 125 1 125 2.64e-53 181
Msa0692370 AT1G56160.1 67.241 116 38 0 2 117 4 119 2.68e-53 179
Msa0692370 AT3G28470.1 64.062 128 46 0 1 128 1 128 9.66e-53 179
Msa0692370 AT2G47460.1 66.379 116 39 0 1 116 1 116 1.13e-52 180
Msa0692370 AT3G13890.2 63.793 116 42 0 1 116 1 116 4.40e-52 178
Msa0692370 AT3G12720.1 60.331 121 48 0 6 126 16 136 9.40e-52 176
Msa0692370 AT1G63910.1 53.378 148 63 2 1 148 1 142 1.83e-51 177
Msa0692370 AT3G49690.1 67.521 117 37 1 1 116 1 117 3.48e-51 174
Msa0692370 AT5G57620.1 65.812 117 39 1 1 116 1 117 9.50e-51 174
Msa0692370 AT5G23000.1 64.103 117 41 1 1 116 1 117 1.69e-50 173
Msa0692370 AT1G79180.2 46.535 202 60 4 2 170 4 190 4.10e-50 172
Msa0692370 AT5G65790.1 66.667 117 38 1 1 116 1 117 8.25e-50 172
Msa0692370 AT3G13890.1 59.200 125 42 1 1 116 1 125 5.31e-49 170
Msa0692370 AT2G36890.1 60.630 127 49 1 1 126 1 127 2.69e-48 166
Msa0692370 AT3G12820.1 62.069 116 44 0 3 118 5 120 2.74e-48 164
Msa0692370 AT2G36890.2 60.630 127 49 1 1 126 42 168 5.11e-48 167
Msa0692370 AT4G37780.1 59.829 117 46 1 1 116 1 117 4.57e-47 163
Msa0692370 AT5G12870.1 65.741 108 37 0 12 119 18 125 4.35e-46 160
Msa0692370 AT2G26960.1 42.714 199 103 6 9 202 17 209 9.69e-44 158
Msa0692370 AT3G08500.1 65.714 105 36 0 12 116 30 134 1.78e-43 155
Msa0692370 AT5G14750.1 62.500 104 39 0 13 116 17 120 2.21e-43 150
Msa0692370 AT4G26930.1 60.714 112 43 1 10 121 17 127 8.89e-43 154
Msa0692370 AT5G55020.1 64.286 112 39 1 10 121 24 134 9.00e-43 157
Msa0692370 AT5G40330.1 61.538 104 40 0 13 116 13 116 4.27e-42 147
Msa0692370 AT5G40350.1 50.000 140 61 1 12 151 17 147 1.31e-41 146
Msa0692370 AT5G35550.1 64.762 105 37 0 12 116 14 118 1.62e-41 147
Msa0692370 AT4G25560.1 62.136 103 39 0 13 115 11 113 4.77e-41 147
Msa0692370 AT5G52600.1 54.264 129 50 1 9 128 9 137 7.05e-41 144
Msa0692370 AT1G48000.1 55.000 120 54 0 10 129 30 149 9.43e-41 145
Msa0692370 AT2G32460.1 56.667 120 51 1 8 127 14 132 1.02e-40 151
Msa0692370 AT3G27920.1 60.000 105 42 0 13 117 15 119 1.51e-40 144
Msa0692370 AT2G32460.2 57.265 117 49 1 11 127 5 120 1.62e-40 150
Msa0692370 AT5G26660.2 75.581 86 21 0 43 128 12 97 1.94e-40 146
Msa0692370 AT3G48920.1 58.095 105 44 0 13 117 19 123 2.49e-40 144
Msa0692370 AT5G52260.1 65.049 103 36 0 13 115 13 115 3.28e-40 144
Msa0692370 AT3G24310.1 61.905 105 40 0 11 115 17 121 4.33e-40 144
Msa0692370 AT5G06100.1 58.559 111 45 1 11 121 31 140 6.49e-40 148
Msa0692370 AT4G13480.1 62.136 103 39 0 13 115 7 109 1.52e-39 142
Msa0692370 AT5G06100.5 58.559 111 45 1 11 121 31 140 2.02e-39 148
Msa0692370 AT5G06100.2 58.559 111 45 1 11 121 31 140 2.02e-39 148
Msa0692370 AT5G06100.3 58.559 111 45 1 11 121 31 140 2.02e-39 148
Msa0692370 AT5G06100.4 58.559 111 45 1 11 121 31 140 2.02e-39 148
Msa0692370 AT3G11440.2 57.273 110 46 1 12 121 41 149 3.17e-39 146
Msa0692370 AT1G66370.1 56.522 115 46 1 1 115 1 111 4.99e-39 140
Msa0692370 AT3G27810.1 48.252 143 66 2 12 146 20 162 5.76e-39 139
Msa0692370 AT3G01530.1 50.758 132 62 1 8 139 21 149 6.74e-39 139
Msa0692370 AT3G30210.1 60.577 104 41 0 11 114 26 129 1.04e-38 140
Msa0692370 AT3G11440.3 57.273 110 46 1 12 121 41 149 1.27e-38 146
Msa0692370 AT3G11440.4 57.273 110 46 1 12 121 41 149 1.27e-38 146
Msa0692370 AT3G11440.1 57.273 110 46 1 12 121 41 149 1.27e-38 146
Msa0692370 AT1G25340.1 54.783 115 52 0 13 127 19 133 1.62e-38 140
Msa0692370 AT3G53200.1 57.692 104 44 0 12 115 9 112 5.60e-37 135
Msa0692370 AT2G47190.1 51.304 115 56 0 8 122 16 130 8.90e-37 135
Msa0692370 AT1G68320.1 53.448 116 54 0 12 127 19 134 2.11e-36 134
Msa0692370 AT3G46130.1 56.190 105 46 0 11 115 8 112 2.13e-36 134
Msa0692370 AT5G59780.3 55.769 104 46 0 12 115 8 111 4.82e-36 132
Msa0692370 AT3G06490.1 54.098 122 56 0 8 129 15 136 5.64e-36 134
Msa0692370 AT1G66380.1 60.952 105 41 0 11 115 7 111 1.15e-35 128
Msa0692370 AT1G56650.1 60.000 105 42 0 11 115 7 111 7.81e-35 129
Msa0692370 AT3G47600.2 51.181 127 59 2 45 169 39 164 9.65e-35 131
Msa0692370 AT1G66390.1 59.048 105 43 0 11 115 7 111 1.95e-34 128
Msa0692370 AT5G49620.1 51.639 122 59 0 8 129 22 143 3.43e-34 129
Msa0692370 AT5G15310.3 64.078 103 35 2 84 186 5 105 7.68e-34 127
Msa0692370 AT1G25340.2 52.174 115 50 1 13 127 19 128 8.10e-34 127
Msa0692370 AT1G25340.3 52.174 115 50 1 13 127 19 128 1.63e-33 127
Msa0692370 AT3G60460.1 50.000 114 55 2 7 119 6 118 3.43e-32 124
Msa0692370 AT5G49620.2 46.324 136 59 1 8 129 22 157 1.20e-30 120
Msa0692370 AT5G14750.3 71.014 69 20 0 48 116 18 86 1.71e-30 115
Msa0692370 AT5G35550.2 69.231 78 24 0 39 116 44 121 1.96e-30 118
Msa0692370 AT3G12820.2 70.423 71 21 0 48 118 2 72 1.05e-29 114
Msa0692370 AT2G26950.1 45.133 113 61 1 9 121 13 124 3.46e-29 117
Msa0692370 AT5G40350.2 49.533 107 45 1 45 151 5 102 5.95e-29 111
Msa0692370 AT1G71030.1 55.556 90 39 1 38 127 7 95 7.76e-28 109
Msa0692370 AT3G53200.2 65.753 73 25 0 43 115 7 79 1.35e-27 108
Msa0692370 AT5G59780.2 64.384 73 26 0 43 115 18 90 1.88e-27 108
Msa0692370 AT1G22640.3 65.217 69 24 0 59 127 2 70 2.10e-27 108
Msa0692370 AT3G46130.3 65.278 72 25 0 44 115 9 80 2.11e-27 108
Msa0692370 AT3G46130.4 64.384 73 26 0 43 115 18 90 3.04e-27 108
Msa0692370 AT1G18960.1 47.059 119 52 4 14 128 10 121 3.97e-27 110
Msa0692370 AT3G27810.2 47.273 110 50 2 45 146 4 113 1.04e-26 105
Msa0692370 AT1G71030.2 58.442 77 32 0 51 127 5 81 1.38e-26 105
Msa0692370 AT5G67300.1 42.975 121 66 2 14 134 6 123 1.52e-26 108
Msa0692370 AT5G02320.1 45.714 105 56 1 12 116 125 228 3.22e-25 108
Msa0692370 AT5G02320.2 45.714 105 56 1 12 116 125 228 3.22e-25 108
Msa0692370 AT5G02320.3 45.714 105 56 1 12 116 65 168 3.54e-25 107
Msa0692370 AT3G09230.1 47.573 103 53 1 14 116 55 156 8.33e-25 105
Msa0692370 AT4G37260.1 46.729 107 56 1 14 120 13 118 8.50e-25 103
Msa0692370 AT4G18770.1 43.243 111 62 1 8 118 211 320 9.50e-25 105
Msa0692370 AT3G50060.1 44.643 112 60 2 14 125 6 115 9.62e-25 103
Msa0692370 AT2G39880.1 48.113 106 46 2 14 115 50 150 1.70e-24 103
Msa0692370 AT2G23290.1 47.115 104 54 1 14 117 13 115 1.72e-24 102
Msa0692370 AT3G09370.2 46.154 104 55 1 12 115 133 235 1.82e-24 105
Msa0692370 AT3G09370.1 46.154 104 55 1 12 115 128 230 1.90e-24 105
Msa0692370 AT3G09370.3 46.154 104 55 1 12 115 141 243 2.60e-24 105
Msa0692370 AT3G23250.2 75.862 58 14 0 59 116 2 59 3.28e-24 100
Msa0692370 AT5G40360.1 43.810 105 57 2 12 116 156 258 5.82e-24 102
Msa0692370 AT1G17950.1 46.078 102 54 1 14 115 5 105 7.45e-24 99.8
Msa0692370 AT3G27785.1 43.243 111 62 1 8 118 183 292 8.34e-24 103
Msa0692370 AT1G66380.3 66.667 72 24 0 44 115 7 78 8.43e-24 95.5
Msa0692370 AT3G55730.1 46.226 106 56 1 14 119 56 160 1.24e-23 102
Msa0692370 AT5G58850.1 46.465 99 52 1 12 110 103 200 1.77e-23 102
Msa0692370 AT1G69560.1 42.202 109 60 2 9 116 102 208 4.69e-22 96.7
Msa0692370 AT5G11510.3 42.857 105 59 1 12 116 79 182 4.71e-22 99.4
Msa0692370 AT5G11510.1 42.857 105 59 1 12 116 79 182 4.71e-22 99.4
Msa0692370 AT5G11510.4 42.857 105 59 1 12 116 79 182 4.71e-22 99.4
Msa0692370 AT5G11050.1 44.330 97 53 1 14 110 105 200 5.71e-22 97.4
Msa0692370 AT5G11510.5 42.857 105 59 1 12 116 79 182 5.74e-22 99.0
Msa0692370 AT1G69560.2 42.202 109 60 2 9 116 118 224 5.81e-22 96.7
Msa0692370 AT5G11510.2 42.857 105 59 1 12 116 79 182 6.07e-22 98.6
Msa0692370 AT4G32730.1 41.905 105 60 1 12 116 85 188 8.45e-22 98.2
Msa0692370 AT4G32730.1 36.000 100 62 2 14 112 35 133 8.58e-13 70.5
Msa0692370 AT4G32730.5 41.905 105 60 1 12 116 85 188 9.58e-22 98.2
Msa0692370 AT4G32730.5 36.000 100 62 2 14 112 35 133 9.80e-13 70.5
Msa0692370 AT4G32730.4 41.905 105 60 1 12 116 85 188 9.58e-22 98.2
Msa0692370 AT4G32730.4 36.000 100 62 2 14 112 35 133 9.80e-13 70.5
Msa0692370 AT4G32730.3 41.905 105 60 1 12 116 85 188 9.58e-22 98.2
Msa0692370 AT4G32730.3 36.000 100 62 2 14 112 35 133 9.80e-13 70.5
Msa0692370 AT4G32730.2 41.905 105 60 1 12 116 85 188 9.58e-22 98.2
Msa0692370 AT4G32730.2 36.000 100 62 2 14 112 35 133 9.80e-13 70.5
Msa0692370 AT5G14750.4 67.241 58 19 0 59 116 2 59 1.12e-21 90.9
Msa0692370 AT5G14750.2 67.241 58 19 0 59 116 2 59 1.12e-21 90.9
Msa0692370 AT1G66380.2 56.098 82 36 0 11 92 7 88 1.19e-21 89.7
Msa0692370 AT1G73410.1 45.098 102 55 1 14 115 6 106 2.31e-21 92.8
Msa0692370 AT1G73410.2 45.098 102 55 1 14 115 6 106 3.14e-21 91.3
Msa0692370 AT1G26780.2 43.810 105 56 2 12 115 96 198 6.72e-21 93.6
Msa0692370 AT1G26780.1 43.810 105 56 2 12 115 96 198 6.77e-21 92.4
Msa0692370 AT4G33450.1 34.641 153 91 4 3 154 13 157 1.11e-20 90.9
Msa0692370 AT2G25230.1 40.171 117 69 1 4 120 16 131 6.81e-20 88.6
Msa0692370 AT5G61420.1 79.167 48 10 0 81 128 2 49 1.56e-19 88.6
Msa0692370 AT5G17800.1 40.351 114 66 2 2 115 82 193 5.59e-19 87.4
Msa0692370 AT3G29020.1 33.333 135 78 3 14 137 65 198 4.40e-18 83.2
Msa0692370 AT3G29020.2 33.083 133 77 3 14 135 67 198 1.34e-17 83.2
Msa0692370 AT5G39700.1 40.385 104 60 2 15 118 57 158 3.51e-17 79.7
Msa0692370 AT4G28110.2 52.632 76 36 0 88 163 4 79 8.89e-17 78.6
Msa0692370 AT4G00540.2 38.739 111 64 2 12 119 101 210 2.79e-16 80.5
Msa0692370 AT4G00540.1 38.739 111 64 2 12 119 99 208 3.94e-16 80.1
Msa0692370 AT2G37630.1 38.000 100 60 1 17 114 7 106 4.49e-16 79.7
Msa0692370 AT5G40430.1 35.043 117 74 2 4 120 44 158 7.05e-16 77.4
Msa0692370 AT2G02820.1 39.394 99 59 1 17 115 33 130 4.81e-15 77.0
Msa0692370 AT2G02820.2 39.394 99 59 1 17 115 33 130 4.91e-15 77.0
Msa0692370 AT2G02820.3 39.394 99 59 1 17 115 33 130 5.65e-15 75.9
Msa0692370 AT1G74650.3 76.190 42 10 0 78 119 2 43 5.86e-15 74.7
Msa0692370 AT3G28910.2 68.889 45 14 0 78 122 2 46 1.29e-14 73.6
Msa0692370 AT1G14350.2 38.384 99 60 1 17 115 28 125 1.48e-13 72.4
Msa0692370 AT1G14350.1 38.384 99 60 1 17 115 28 125 1.48e-13 72.4
Msa0692370 AT5G59780.1 65.116 43 15 0 73 115 4 46 3.17e-13 67.8
Msa0692370 AT1G74430.2 57.692 52 22 0 77 128 8 59 3.86e-13 68.6
Msa0692370 AT3G46130.2 65.116 43 15 0 73 115 4 46 4.87e-13 67.8
Msa0692370 AT4G25560.2 64.444 45 16 0 71 115 3 47 4.93e-13 68.6
Msa0692370 AT1G22640.2 67.500 40 13 0 88 127 16 55 1.01e-12 66.6
Msa0692370 AT5G14340.2 51.923 52 24 1 81 131 2 53 6.98e-12 64.3

Find 91 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGAACTTTCAGTTTAT+TGG 0.159060 4_4:-60858085 None:intergenic
ATTTCATTGTCTGTTCTTCT+TGG 0.170863 4_4:-60857868 None:intergenic
ATTCAACTTCATGCCCTTCT+TGG 0.237204 4_4:+60857035 Msa0692370:CDS
ATAGCTTATATTGAAGAATT+TGG 0.246166 4_4:+60856772 Msa0692370:CDS
CCAGGTGAATGATCCTGTTT+TGG 0.246738 4_4:-60857961 None:intergenic
TCATTGGTGTTGTTGGTTAA+AGG 0.270364 4_4:-60858456 None:intergenic
TGAAGAACATTTGTTGAAAT+AGG 0.280127 4_4:-60858648 None:intergenic
GCTATAGGGAGTACTTAATT+AGG 0.284883 4_4:+60858849 Msa0692370:three_prime_UTR
ATCTATAGCTTCATTATTAT+AGG 0.287188 4_4:-60858791 None:intergenic
TCGAGGAGAATAAGCATTAT+TGG 0.289886 4_4:+60858721 Msa0692370:CDS
AAGAGGAAAGTTTAGTTTGC+AGG 0.291765 4_4:+60856998 Msa0692370:CDS
AAACCAATCAGTGAATGTTT+TGG 0.306260 4_4:-60856649 None:intergenic
GTTATTGTTTGAGTCATCTT+TGG 0.317182 4_4:-60858256 None:intergenic
TCAGCAAGATGATGATATTA+TGG 0.317696 4_4:+60858569 Msa0692370:CDS
CTCCCAAAACATTCACTGAT+TGG 0.332148 4_4:+60856646 Msa0692370:five_prime_UTR
ATCATCATCATTGGTGTTGT+TGG 0.339289 4_4:-60858463 None:intergenic
GGAAGTAAACTTTGATTGAA+TGG 0.339722 4_4:-60858435 None:intergenic
ATAGTAGCTGTTAGGCTATA+GGG 0.340905 4_4:+60858835 Msa0692370:three_prime_UTR
TATAGTAGCTGTTAGGCTAT+AGG 0.353525 4_4:+60858834 Msa0692370:three_prime_UTR
CATTATTGGAATAGCATACT+TGG 0.366602 4_4:+60858735 Msa0692370:CDS
ACTGAGGTTAGCTGAGTCTT+TGG 0.373102 4_4:-60858004 None:intergenic
ATGAACTTTGCCATGCTTTG+AGG 0.375041 4_4:-60858209 None:intergenic
AAAGGAAGCAAGGTTGTTCC+AGG 0.376507 4_4:-60858357 None:intergenic
TTGGAATAGCATACTTGGTT+TGG 0.378256 4_4:+60858740 Msa0692370:CDS
TCAATATTATTGTTTGTCAT+AGG 0.380905 4_4:-60858411 None:intergenic
TACTGAGAAGTGGAACTTCC+AGG 0.387490 4_4:-60857979 None:intergenic
TCTTTGGTTGTTGATGTTGT+TGG 0.388915 4_4:-60858240 None:intergenic
CCAATGATGATGATGAGATA+TGG 0.393529 4_4:+60858472 Msa0692370:CDS
TTCATGCCCTTCTTGGAAAC+AGG 0.394656 4_4:+60857042 Msa0692370:CDS
AAGAATTTGGTCATGGAAGC+TGG 0.395565 4_4:+60856785 Msa0692370:CDS
CGTGCATTGCCTGCCAAAGC+TGG 0.405442 4_4:+60856808 Msa0692370:CDS
TCAAAGCATGGCAAAGTTCA+TGG 0.411605 4_4:+60858211 Msa0692370:CDS
CCATATCTCATCATCATCAT+TGG 0.411752 4_4:-60858472 None:intergenic
CCTCAGTCACATGGCTCAAT+GGG 0.411999 4_4:+60858020 Msa0692370:CDS
TGGAGATTCAAGATCATCAT+TGG 0.412198 4_4:-60858316 None:intergenic
TTTGTCATAGGAGCAGAAAC+TGG 0.418271 4_4:-60858399 None:intergenic
ACCTCAGTCACATGGCTCAA+TGG 0.425348 4_4:+60858019 Msa0692370:CDS
TATTAAATACCAACCAGCTT+TGG 0.425638 4_4:-60856821 None:intergenic
TCTTGGAAGTTGAGCTGCTA+TGG 0.431859 4_4:-60857851 None:intergenic
TACAACTCACAAACCAAAAC+AGG 0.434996 4_4:+60857948 Msa0692370:CDS
ACATCCACTTTGAACTTCCC+TGG 0.436918 4_4:+60858339 Msa0692370:CDS
TGGTCTTCCTCAGGAGTCCA+TGG 0.445498 4_4:-60856742 None:intergenic
TCAATGGGAAAGTGCTCGTT+TGG 0.449605 4_4:+60858035 Msa0692370:CDS
ACAATGAAATCAAGAACTAC+TGG 0.450211 4_4:+60857881 Msa0692370:CDS
CAAGAAAAGACTAACAAGAA+TGG 0.454130 4_4:+60857915 Msa0692370:CDS
GAGAAAGTTGGATTGAAGAA+AGG 0.460027 4_4:+60856718 Msa0692370:CDS
AGAGGAACAGAAAGAGGTAA+AGG 0.463876 4_4:-60858375 None:intergenic
AAGAAAAGACTAACAAGAAT+GGG 0.464161 4_4:+60857916 Msa0692370:CDS
ATAATGAAGCTATAGATCAT+AGG 0.468681 4_4:+60858797 Msa0692370:exon
AATGTTCTTCAAGTTCTTGA+GGG 0.469624 4_4:+60858660 Msa0692370:CDS
AAAAGTCTTGCAGGTGGCTG+TGG 0.483350 4_4:-60858132 None:intergenic
TCACCTTGTTGTGAGAAAGT+TGG 0.491643 4_4:+60856706 Msa0692370:CDS
TATTTACCTGTTTCCAAGAA+GGG 0.499572 4_4:-60857048 None:intergenic
AGCTAGCTATAGTAGCTGTT+AGG 0.503017 4_4:+60858827 Msa0692370:three_prime_UTR
AAATACCAACCAGCTTTGGC+AGG 0.509951 4_4:-60856817 None:intergenic
AAATGTTCTTCAAGTTCTTG+AGG 0.511287 4_4:+60858659 Msa0692370:CDS
AGAACATTTGTTGAAATAGG+AGG 0.514999 4_4:-60858645 None:intergenic
GAAAGAGCTGCAGACTAAGA+TGG 0.517757 4_4:+60856949 Msa0692370:CDS
CCAAAACAGGATCATTCACC+TGG 0.519292 4_4:+60857961 Msa0692370:CDS
ACTGGAAGAGGAACAGAAAG+AGG 0.527531 4_4:-60858381 None:intergenic
TGATGATATTATGGCGGCTG+TGG 0.535815 4_4:+60858578 Msa0692370:CDS
GTATTTACCTGTTTCCAAGA+AGG 0.550074 4_4:-60857049 None:intergenic
TATATTGAAGAATTTGGTCA+TGG 0.553122 4_4:+60856778 Msa0692370:CDS
GGAAGTGAAGGTTGAATCAA+TGG 0.554146 4_4:-60858171 None:intergenic
AGTTGATAATAATGCAATGT+CGG 0.557474 4_4:+60858883 Msa0692370:three_prime_UTR
GGGAAGTTCAAAGTGGATGT+TGG 0.558335 4_4:-60858336 None:intergenic
TCAAGACAAGGTGGAAGTGA+AGG 0.564353 4_4:-60858183 None:intergenic
CCCATTGAGCCATGTGACTG+AGG 0.574906 4_4:-60858020 None:intergenic
AGAAAGAGGTAAAGGAAGCA+AGG 0.575341 4_4:-60858367 None:intergenic
GTCTTTGGTGTACTGAGAAG+TGG 0.581157 4_4:-60857989 None:intergenic
CTTGAGGGTGGTGATCAAGA+TGG 0.592637 4_4:+60858675 Msa0692370:CDS
CTCAGCTAACCTCAGTCACA+TGG 0.592879 4_4:+60858011 Msa0692370:CDS
GTTCTTCAAGTTCTTGAGGG+TGG 0.594370 4_4:+60858663 Msa0692370:CDS
CATAACACAGAAGGTGGTCA+TGG 0.605129 4_4:+60858516 Msa0692370:CDS
ATAGGAGCAGAAACTGGAAG+AGG 0.612587 4_4:-60858393 None:intergenic
GTGGAAGCATTTAGAGCAAG+CGG 0.613994 4_4:+60858597 Msa0692370:CDS
TTGGGAGATTTATCGTACAA+AGG 0.615027 4_4:-60856630 None:intergenic
AATCCAACTTTCTCACAACA+AGG 0.616486 4_4:-60856709 None:intergenic
TTAACTAAGCATAACACAGA+AGG 0.617178 4_4:+60858507 Msa0692370:CDS
GTCTTGATATCCTCAAAGCA+TGG 0.625732 4_4:+60858199 Msa0692370:CDS
ACTAAGCATAACACAGAAGG+TGG 0.627492 4_4:+60858510 Msa0692370:CDS
TTGGATTGAAGAAAGGACCA+TGG 0.646456 4_4:+60856725 Msa0692370:CDS
TGTTCCAGGGAAGTTCAAAG+TGG 0.664387 4_4:-60858343 None:intergenic
GAAAGGACCATGGACTCCTG+AGG 0.668803 4_4:+60856735 Msa0692370:CDS
AAGGAAGCAAGGTTGTTCCA+GGG 0.687540 4_4:-60858356 None:intergenic
GAAGCATTTAGAGCAAGCGG+AGG 0.688570 4_4:+60858600 Msa0692370:CDS
GCAAGATGATGATATTATGG+CGG 0.691629 4_4:+60858572 Msa0692370:CDS
TTGAGGATATCAAGACAAGG+TGG 0.701426 4_4:-60858192 None:intergenic
TGAATCTGATGATATGAACA+TGG 0.724861 4_4:+60858767 Msa0692370:CDS
GCTTTGAGGATATCAAGACA+AGG 0.746052 4_4:-60858195 None:intergenic
AATGTGTAACGTGAATCTCG+AGG 0.750691 4_4:+60858704 Msa0692370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGAGTTTATAATAAAAA+AGG + chr4_4:60857500-60857519 Msa0692370:intron 10.0%
!!! TTTTGAGTTTATAATAAAAA+AGG + chr4_4:60857500-60857519 Msa0692370:intron 10.0%
!! GAAAAAATAACAATTAATAG+TGG + chr4_4:60857382-60857401 Msa0692370:intron 15.0%
!! GAAAAAATAACAATTAATAG+TGG + chr4_4:60857382-60857401 Msa0692370:intron 15.0%
!! ATAGCTTATATTGAAGAATT+TGG + chr4_4:60856772-60856791 Msa0692370:CDS 20.0%
!!! GTATATGTAGCTTTTATATA+TGG + chr4_4:60857190-60857209 Msa0692370:intron 20.0%
!! TTTGATGAAATATTGAAACT+AGG - chr4_4:60857271-60857290 None:intergenic 20.0%
!!! TTTTATAAGTTGAATGTGTA+AGG - chr4_4:60857629-60857648 None:intergenic 20.0%
!!! AGTACTATTACTTTTTTTAG+TGG + chr4_4:60857682-60857701 Msa0692370:intron 20.0%
!! TCAATATTATTGTTTGTCAT+AGG - chr4_4:60858414-60858433 None:intergenic 20.0%
!! ATCTATAGCTTCATTATTAT+AGG - chr4_4:60858794-60858813 None:intergenic 20.0%
!! ATAGCTTATATTGAAGAATT+TGG + chr4_4:60856772-60856791 Msa0692370:CDS 20.0%
!!! GTATATGTAGCTTTTATATA+TGG + chr4_4:60857190-60857209 Msa0692370:intron 20.0%
!! TTTGATGAAATATTGAAACT+AGG - chr4_4:60857271-60857290 None:intergenic 20.0%
!!! TTTTATAAGTTGAATGTGTA+AGG - chr4_4:60857629-60857648 None:intergenic 20.0%
!!! AGTACTATTACTTTTTTTAG+TGG + chr4_4:60857682-60857701 Msa0692370:intron 20.0%
!! TCAATATTATTGTTTGTCAT+AGG - chr4_4:60858414-60858433 None:intergenic 20.0%
!! ATCTATAGCTTCATTATTAT+AGG - chr4_4:60858794-60858813 None:intergenic 20.0%
!! ATAGTCTAGAGTTTGAAAAA+TGG + chr4_4:60856678-60856697 Msa0692370:exon 25.0%
!! TAGTCTAGAGTTTGAAAAAT+GGG + chr4_4:60856679-60856698 Msa0692370:exon 25.0%
!! CAATATAAGCTATGAGTTTT+TGG - chr4_4:60856765-60856784 None:intergenic 25.0%
! TATATTGAAGAATTTGGTCA+TGG + chr4_4:60856778-60856797 Msa0692370:CDS 25.0%
! AGTAAGCAATCATTTATATG+TGG - chr4_4:60857100-60857119 None:intergenic 25.0%
! AAAAAAAACTTCCCAAGTTA+GGG - chr4_4:60857134-60857153 None:intergenic 25.0%
! AAAAAAAAACTTCCCAAGTT+AGG - chr4_4:60857135-60857154 None:intergenic 25.0%
!!! AACTTGGGAAGTTTTTTTTT+AGG + chr4_4:60857135-60857154 Msa0692370:intron 25.0%
! CATCACTATGTAATCATATA+CGG - chr4_4:60857774-60857793 None:intergenic 25.0%
! AAGAAAAGACTAACAAGAAT+GGG + chr4_4:60857916-60857935 Msa0692370:CDS 25.0%
! TCTTTGAACTTTCAGTTTAT+TGG - chr4_4:60858088-60858107 None:intergenic 25.0%
!! TGAAGAACATTTGTTGAAAT+AGG - chr4_4:60858651-60858670 None:intergenic 25.0%
! ATAATGAAGCTATAGATCAT+AGG + chr4_4:60858797-60858816 Msa0692370:exon 25.0%
!!! AGTTGATAATAATGCAATGT+CGG + chr4_4:60858883-60858902 Msa0692370:three_prime_UTR 25.0%
!! ATAGTCTAGAGTTTGAAAAA+TGG + chr4_4:60856678-60856697 Msa0692370:exon 25.0%
!! TAGTCTAGAGTTTGAAAAAT+GGG + chr4_4:60856679-60856698 Msa0692370:exon 25.0%
!! CAATATAAGCTATGAGTTTT+TGG - chr4_4:60856765-60856784 None:intergenic 25.0%
! TATATTGAAGAATTTGGTCA+TGG + chr4_4:60856778-60856797 Msa0692370:CDS 25.0%
! AGTAAGCAATCATTTATATG+TGG - chr4_4:60857100-60857119 None:intergenic 25.0%
! AAAAAAAACTTCCCAAGTTA+GGG - chr4_4:60857134-60857153 None:intergenic 25.0%
! AAAAAAAAACTTCCCAAGTT+AGG - chr4_4:60857135-60857154 None:intergenic 25.0%
!!! AACTTGGGAAGTTTTTTTTT+AGG + chr4_4:60857135-60857154 Msa0692370:intron 25.0%
! CATCACTATGTAATCATATA+CGG - chr4_4:60857774-60857793 None:intergenic 25.0%
! AAGAAAAGACTAACAAGAAT+GGG + chr4_4:60857916-60857935 Msa0692370:CDS 25.0%
! TCTTTGAACTTTCAGTTTAT+TGG - chr4_4:60858088-60858107 None:intergenic 25.0%
!! TGAAGAACATTTGTTGAAAT+AGG - chr4_4:60858651-60858670 None:intergenic 25.0%
! ATAATGAAGCTATAGATCAT+AGG + chr4_4:60858797-60858816 Msa0692370:exon 25.0%
! AACCAATCAGTGAATGTTTT+GGG - chr4_4:60856651-60856670 None:intergenic 30.0%
! AAACCAATCAGTGAATGTTT+TGG - chr4_4:60856652-60856671 None:intergenic 30.0%
TATTAAATACCAACCAGCTT+TGG - chr4_4:60856824-60856843 None:intergenic 30.0%
! AACTTTCCTCTTTTTATGTC+TGG - chr4_4:60856990-60857009 None:intergenic 30.0%
TATTTACCTGTTTCCAAGAA+GGG - chr4_4:60857051-60857070 None:intergenic 30.0%
!!! TTTTTTTAGGAGTCCTAACT+TGG + chr4_4:60857148-60857167 Msa0692370:intron 30.0%
! AGAGACTATAAAAAGCATGT+TGG - chr4_4:60857232-60857251 None:intergenic 30.0%
TCCAGTAAATTTCTTTCGTT+TGG + chr4_4:60857338-60857357 Msa0692370:intron 30.0%
TCCAAACGAAAGAAATTTAC+TGG - chr4_4:60857342-60857361 None:intergenic 30.0%
AAAAAGGACATGTTTCTCTT+AGG + chr4_4:60857516-60857535 Msa0692370:intron 30.0%
ATTTCATTGTCTGTTCTTCT+TGG - chr4_4:60857871-60857890 None:intergenic 30.0%
ACAATGAAATCAAGAACTAC+TGG + chr4_4:60857881-60857900 Msa0692370:CDS 30.0%
!!! TTCTTGTTAGTCTTTTCTTG+AGG - chr4_4:60857915-60857934 None:intergenic 30.0%
CAAGAAAAGACTAACAAGAA+TGG + chr4_4:60857915-60857934 Msa0692370:CDS 30.0%
GTTATTGTTTGAGTCATCTT+TGG - chr4_4:60858259-60858278 None:intergenic 30.0%
GGAAGTAAACTTTGATTGAA+TGG - chr4_4:60858438-60858457 None:intergenic 30.0%
TTAACTAAGCATAACACAGA+AGG + chr4_4:60858507-60858526 Msa0692370:CDS 30.0%
TCAGCAAGATGATGATATTA+TGG + chr4_4:60858569-60858588 Msa0692370:CDS 30.0%
! AGAACATTTGTTGAAATAGG+AGG - chr4_4:60858648-60858667 None:intergenic 30.0%
! AAATGTTCTTCAAGTTCTTG+AGG + chr4_4:60858659-60858678 Msa0692370:CDS 30.0%
! AATGTTCTTCAAGTTCTTGA+GGG + chr4_4:60858660-60858679 Msa0692370:CDS 30.0%
CATTATTGGAATAGCATACT+TGG + chr4_4:60858735-60858754 Msa0692370:CDS 30.0%
TGAATCTGATGATATGAACA+TGG + chr4_4:60858767-60858786 Msa0692370:CDS 30.0%
! AACCAATCAGTGAATGTTTT+GGG - chr4_4:60856651-60856670 None:intergenic 30.0%
! AAACCAATCAGTGAATGTTT+TGG - chr4_4:60856652-60856671 None:intergenic 30.0%
TATTAAATACCAACCAGCTT+TGG - chr4_4:60856824-60856843 None:intergenic 30.0%
! AACTTTCCTCTTTTTATGTC+TGG - chr4_4:60856990-60857009 None:intergenic 30.0%
TATTTACCTGTTTCCAAGAA+GGG - chr4_4:60857051-60857070 None:intergenic 30.0%
!!! TTTTTTTAGGAGTCCTAACT+TGG + chr4_4:60857148-60857167 Msa0692370:intron 30.0%
! AGAGACTATAAAAAGCATGT+TGG - chr4_4:60857232-60857251 None:intergenic 30.0%
TCCAGTAAATTTCTTTCGTT+TGG + chr4_4:60857338-60857357 Msa0692370:intron 30.0%
TCCAAACGAAAGAAATTTAC+TGG - chr4_4:60857342-60857361 None:intergenic 30.0%
AAAAAGGACATGTTTCTCTT+AGG + chr4_4:60857516-60857535 Msa0692370:intron 30.0%
ATTTCATTGTCTGTTCTTCT+TGG - chr4_4:60857871-60857890 None:intergenic 30.0%
ACAATGAAATCAAGAACTAC+TGG + chr4_4:60857881-60857900 Msa0692370:CDS 30.0%
!!! TTCTTGTTAGTCTTTTCTTG+AGG - chr4_4:60857915-60857934 None:intergenic 30.0%
CAAGAAAAGACTAACAAGAA+TGG + chr4_4:60857915-60857934 Msa0692370:CDS 30.0%
GTTATTGTTTGAGTCATCTT+TGG - chr4_4:60858259-60858278 None:intergenic 30.0%
GGAAGTAAACTTTGATTGAA+TGG - chr4_4:60858438-60858457 None:intergenic 30.0%
TTAACTAAGCATAACACAGA+AGG + chr4_4:60858507-60858526 Msa0692370:CDS 30.0%
TCAGCAAGATGATGATATTA+TGG + chr4_4:60858569-60858588 Msa0692370:CDS 30.0%
! AGAACATTTGTTGAAATAGG+AGG - chr4_4:60858648-60858667 None:intergenic 30.0%
! AAATGTTCTTCAAGTTCTTG+AGG + chr4_4:60858659-60858678 Msa0692370:CDS 30.0%
! AATGTTCTTCAAGTTCTTGA+GGG + chr4_4:60858660-60858679 Msa0692370:CDS 30.0%
CATTATTGGAATAGCATACT+TGG + chr4_4:60858735-60858754 Msa0692370:CDS 30.0%
TGAATCTGATGATATGAACA+TGG + chr4_4:60858767-60858786 Msa0692370:CDS 30.0%
TTGGGAGATTTATCGTACAA+AGG - chr4_4:60856633-60856652 None:intergenic 35.0%
CTAGAGTTTGAAAAATGGGT+AGG + chr4_4:60856683-60856702 Msa0692370:exon 35.0%
AATCCAACTTTCTCACAACA+AGG - chr4_4:60856712-60856731 None:intergenic 35.0%
GAGAAAGTTGGATTGAAGAA+AGG + chr4_4:60856718-60856737 Msa0692370:CDS 35.0%
TAAAAAGGGCTTCAAAGATG+TGG + chr4_4:60856927-60856946 Msa0692370:intron 35.0%
! TTCCTCTTTTTATGTCTGGT+CGG - chr4_4:60856986-60857005 None:intergenic 35.0%
!! AAGAGGAAAGTTTAGTTTGC+AGG + chr4_4:60856998-60857017 Msa0692370:CDS 35.0%
GTATTTACCTGTTTCCAAGA+AGG - chr4_4:60857052-60857071 None:intergenic 35.0%
ATTTATATGTGGTCTGCTAC+TGG - chr4_4:60857089-60857108 None:intergenic 35.0%
TAATAGTACTCTCCCTAACT+TGG + chr4_4:60857119-60857138 Msa0692370:intron 35.0%
AATAGTACTCTCCCTAACTT+GGG + chr4_4:60857120-60857139 Msa0692370:intron 35.0%
AGCTACATATACTACCATAG+TGG - chr4_4:60857182-60857201 None:intergenic 35.0%
CTCACTGCTACAGTTATTAA+TGG - chr4_4:60857719-60857738 None:intergenic 35.0%
CATTAATAACTGTAGCAGTG+AGG + chr4_4:60857717-60857736 Msa0692370:intron 35.0%
ATTGATTATGTGCACACAGA+TGG + chr4_4:60857824-60857843 Msa0692370:intron 35.0%
!!! GTTTTGGTTTGTGAGTTGTA+GGG - chr4_4:60857948-60857967 None:intergenic 35.0%
!!! TGTTTTGGTTTGTGAGTTGT+AGG - chr4_4:60857949-60857968 None:intergenic 35.0%
TACAACTCACAAACCAAAAC+AGG + chr4_4:60857948-60857967 Msa0692370:CDS 35.0%
TTGTTGAGAAAAAGTCTTGC+AGG - chr4_4:60858144-60858163 None:intergenic 35.0%
TCTTTGGTTGTTGATGTTGT+TGG - chr4_4:60858243-60858262 None:intergenic 35.0%
TGGAGATTCAAGATCATCAT+TGG - chr4_4:60858319-60858338 None:intergenic 35.0%
!! TCATTGGTGTTGTTGGTTAA+AGG - chr4_4:60858459-60858478 None:intergenic 35.0%
!! ATCATCATCATTGGTGTTGT+TGG - chr4_4:60858466-60858485 None:intergenic 35.0%
CCATATCTCATCATCATCAT+TGG - chr4_4:60858475-60858494 None:intergenic 35.0%
! CCAATGATGATGATGAGATA+TGG + chr4_4:60858472-60858491 Msa0692370:CDS 35.0%
GCAAGATGATGATATTATGG+CGG + chr4_4:60858572-60858591 Msa0692370:CDS 35.0%
TCGAGGAGAATAAGCATTAT+TGG + chr4_4:60858721-60858740 Msa0692370:CDS 35.0%
TTGGAATAGCATACTTGGTT+TGG + chr4_4:60858740-60858759 Msa0692370:CDS 35.0%
TATAGTAGCTGTTAGGCTAT+AGG + chr4_4:60858834-60858853 Msa0692370:three_prime_UTR 35.0%
ATAGTAGCTGTTAGGCTATA+GGG + chr4_4:60858835-60858854 Msa0692370:three_prime_UTR 35.0%
!! GCTATAGGGAGTACTTAATT+AGG + chr4_4:60858849-60858868 Msa0692370:three_prime_UTR 35.0%
TTGGGAGATTTATCGTACAA+AGG - chr4_4:60856633-60856652 None:intergenic 35.0%
CTAGAGTTTGAAAAATGGGT+AGG + chr4_4:60856683-60856702 Msa0692370:exon 35.0%
AATCCAACTTTCTCACAACA+AGG - chr4_4:60856712-60856731 None:intergenic 35.0%
GAGAAAGTTGGATTGAAGAA+AGG + chr4_4:60856718-60856737 Msa0692370:CDS 35.0%
TAAAAAGGGCTTCAAAGATG+TGG + chr4_4:60856927-60856946 Msa0692370:intron 35.0%
! TTCCTCTTTTTATGTCTGGT+CGG - chr4_4:60856986-60857005 None:intergenic 35.0%
!! AAGAGGAAAGTTTAGTTTGC+AGG + chr4_4:60856998-60857017 Msa0692370:CDS 35.0%
GTATTTACCTGTTTCCAAGA+AGG - chr4_4:60857052-60857071 None:intergenic 35.0%
ATTTATATGTGGTCTGCTAC+TGG - chr4_4:60857089-60857108 None:intergenic 35.0%
TAATAGTACTCTCCCTAACT+TGG + chr4_4:60857119-60857138 Msa0692370:intron 35.0%
AATAGTACTCTCCCTAACTT+GGG + chr4_4:60857120-60857139 Msa0692370:intron 35.0%
AGCTACATATACTACCATAG+TGG - chr4_4:60857182-60857201 None:intergenic 35.0%
CTCACTGCTACAGTTATTAA+TGG - chr4_4:60857719-60857738 None:intergenic 35.0%
CATTAATAACTGTAGCAGTG+AGG + chr4_4:60857717-60857736 Msa0692370:intron 35.0%
ATTGATTATGTGCACACAGA+TGG + chr4_4:60857824-60857843 Msa0692370:intron 35.0%
!!! GTTTTGGTTTGTGAGTTGTA+GGG - chr4_4:60857948-60857967 None:intergenic 35.0%
!!! TGTTTTGGTTTGTGAGTTGT+AGG - chr4_4:60857949-60857968 None:intergenic 35.0%
TACAACTCACAAACCAAAAC+AGG + chr4_4:60857948-60857967 Msa0692370:CDS 35.0%
TTGTTGAGAAAAAGTCTTGC+AGG - chr4_4:60858144-60858163 None:intergenic 35.0%
TCTTTGGTTGTTGATGTTGT+TGG - chr4_4:60858243-60858262 None:intergenic 35.0%
TGGAGATTCAAGATCATCAT+TGG - chr4_4:60858319-60858338 None:intergenic 35.0%
!! TCATTGGTGTTGTTGGTTAA+AGG - chr4_4:60858459-60858478 None:intergenic 35.0%
!! ATCATCATCATTGGTGTTGT+TGG - chr4_4:60858466-60858485 None:intergenic 35.0%
CCATATCTCATCATCATCAT+TGG - chr4_4:60858475-60858494 None:intergenic 35.0%
! CCAATGATGATGATGAGATA+TGG + chr4_4:60858472-60858491 Msa0692370:CDS 35.0%
GCAAGATGATGATATTATGG+CGG + chr4_4:60858572-60858591 Msa0692370:CDS 35.0%
TCGAGGAGAATAAGCATTAT+TGG + chr4_4:60858721-60858740 Msa0692370:CDS 35.0%
TTGGAATAGCATACTTGGTT+TGG + chr4_4:60858740-60858759 Msa0692370:CDS 35.0%
TATAGTAGCTGTTAGGCTAT+AGG + chr4_4:60858834-60858853 Msa0692370:three_prime_UTR 35.0%
ATAGTAGCTGTTAGGCTATA+GGG + chr4_4:60858835-60858854 Msa0692370:three_prime_UTR 35.0%
!! GCTATAGGGAGTACTTAATT+AGG + chr4_4:60858849-60858868 Msa0692370:three_prime_UTR 35.0%
CTCCCAAAACATTCACTGAT+TGG + chr4_4:60856646-60856665 Msa0692370:five_prime_UTR 40.0%
! TCACCTTGTTGTGAGAAAGT+TGG + chr4_4:60856706-60856725 Msa0692370:CDS 40.0%
TTGGATTGAAGAAAGGACCA+TGG + chr4_4:60856725-60856744 Msa0692370:CDS 40.0%
!!! ATGAGTTTTTGGTCTTCCTC+AGG - chr4_4:60856754-60856773 None:intergenic 40.0%
AAGAATTTGGTCATGGAAGC+TGG + chr4_4:60856785-60856804 Msa0692370:CDS 40.0%
ATTCAACTTCATGCCCTTCT+TGG + chr4_4:60857035-60857054 Msa0692370:CDS 40.0%
CTGCTACTGGAAAAGGTAAA+GGG - chr4_4:60857076-60857095 None:intergenic 40.0%
TCTGCTACTGGAAAAGGTAA+AGG - chr4_4:60857077-60857096 None:intergenic 40.0%
AGTGGTCAACTTTCCAAGTT+AGG - chr4_4:60857164-60857183 None:intergenic 40.0%
ACTTGGAAAGTTGACCACTA+TGG + chr4_4:60857165-60857184 Msa0692370:intron 40.0%
TAGTGGTAAAACGCACTTAG+TGG + chr4_4:60857399-60857418 Msa0692370:intron 40.0%
AAGGACATGTTTCTCTTAGG+AGG + chr4_4:60857519-60857538 Msa0692370:intron 40.0%
AACCAAATACGTCAACATGC+TGG - chr4_4:60857578-60857597 None:intergenic 40.0%
TTGAGAAAAAGTCTTGCAGG+TGG - chr4_4:60858141-60858160 None:intergenic 40.0%
GGAAGTGAAGGTTGAATCAA+TGG - chr4_4:60858174-60858193 None:intergenic 40.0%
TTGAGGATATCAAGACAAGG+TGG - chr4_4:60858195-60858214 None:intergenic 40.0%
!! GCTTTGAGGATATCAAGACA+AGG - chr4_4:60858198-60858217 None:intergenic 40.0%
GTCTTGATATCCTCAAAGCA+TGG + chr4_4:60858199-60858218 Msa0692370:CDS 40.0%
ATGAACTTTGCCATGCTTTG+AGG - chr4_4:60858212-60858231 None:intergenic 40.0%
TCAAAGCATGGCAAAGTTCA+TGG + chr4_4:60858211-60858230 Msa0692370:CDS 40.0%
AGAAAGAGGTAAAGGAAGCA+AGG - chr4_4:60858370-60858389 None:intergenic 40.0%
AGAGGAACAGAAAGAGGTAA+AGG - chr4_4:60858378-60858397 None:intergenic 40.0%
TTTGTCATAGGAGCAGAAAC+TGG - chr4_4:60858402-60858421 None:intergenic 40.0%
ACTAAGCATAACACAGAAGG+TGG + chr4_4:60858510-60858529 Msa0692370:CDS 40.0%
AATGTGTAACGTGAATCTCG+AGG + chr4_4:60858704-60858723 Msa0692370:CDS 40.0%
AGCTAGCTATAGTAGCTGTT+AGG + chr4_4:60858827-60858846 Msa0692370:three_prime_UTR 40.0%
CTCCCAAAACATTCACTGAT+TGG + chr4_4:60856646-60856665 Msa0692370:five_prime_UTR 40.0%
! TCACCTTGTTGTGAGAAAGT+TGG + chr4_4:60856706-60856725 Msa0692370:CDS 40.0%
TTGGATTGAAGAAAGGACCA+TGG + chr4_4:60856725-60856744 Msa0692370:CDS 40.0%
!!! ATGAGTTTTTGGTCTTCCTC+AGG - chr4_4:60856754-60856773 None:intergenic 40.0%
AAGAATTTGGTCATGGAAGC+TGG + chr4_4:60856785-60856804 Msa0692370:CDS 40.0%
ATTCAACTTCATGCCCTTCT+TGG + chr4_4:60857035-60857054 Msa0692370:CDS 40.0%
CTGCTACTGGAAAAGGTAAA+GGG - chr4_4:60857076-60857095 None:intergenic 40.0%
TCTGCTACTGGAAAAGGTAA+AGG - chr4_4:60857077-60857096 None:intergenic 40.0%
AGTGGTCAACTTTCCAAGTT+AGG - chr4_4:60857164-60857183 None:intergenic 40.0%
ACTTGGAAAGTTGACCACTA+TGG + chr4_4:60857165-60857184 Msa0692370:intron 40.0%
TAGTGGTAAAACGCACTTAG+TGG + chr4_4:60857399-60857418 Msa0692370:intron 40.0%
AAGGACATGTTTCTCTTAGG+AGG + chr4_4:60857519-60857538 Msa0692370:intron 40.0%
AACCAAATACGTCAACATGC+TGG - chr4_4:60857578-60857597 None:intergenic 40.0%
TTGAGAAAAAGTCTTGCAGG+TGG - chr4_4:60858141-60858160 None:intergenic 40.0%
GGAAGTGAAGGTTGAATCAA+TGG - chr4_4:60858174-60858193 None:intergenic 40.0%
TTGAGGATATCAAGACAAGG+TGG - chr4_4:60858195-60858214 None:intergenic 40.0%
!! GCTTTGAGGATATCAAGACA+AGG - chr4_4:60858198-60858217 None:intergenic 40.0%
GTCTTGATATCCTCAAAGCA+TGG + chr4_4:60858199-60858218 Msa0692370:CDS 40.0%
ATGAACTTTGCCATGCTTTG+AGG - chr4_4:60858212-60858231 None:intergenic 40.0%
TCAAAGCATGGCAAAGTTCA+TGG + chr4_4:60858211-60858230 Msa0692370:CDS 40.0%
AGAAAGAGGTAAAGGAAGCA+AGG - chr4_4:60858370-60858389 None:intergenic 40.0%
AGAGGAACAGAAAGAGGTAA+AGG - chr4_4:60858378-60858397 None:intergenic 40.0%
TTTGTCATAGGAGCAGAAAC+TGG - chr4_4:60858402-60858421 None:intergenic 40.0%
ACTAAGCATAACACAGAAGG+TGG + chr4_4:60858510-60858529 Msa0692370:CDS 40.0%
AATGTGTAACGTGAATCTCG+AGG + chr4_4:60858704-60858723 Msa0692370:CDS 40.0%
AGCTAGCTATAGTAGCTGTT+AGG + chr4_4:60858827-60858846 Msa0692370:three_prime_UTR 40.0%
! AAATACCAACCAGCTTTGGC+AGG - chr4_4:60856820-60856839 None:intergenic 45.0%
GAAAGAGCTGCAGACTAAGA+TGG + chr4_4:60856949-60856968 Msa0692370:CDS 45.0%
! CTCTTTTTATGTCTGGTCGG+AGG - chr4_4:60856983-60857002 None:intergenic 45.0%
CTCCGACCAGACATAAAAAG+AGG + chr4_4:60856981-60857000 Msa0692370:CDS 45.0%
TTCATGCCCTTCTTGGAAAC+AGG + chr4_4:60857042-60857061 Msa0692370:CDS 45.0%
ATGTGGTCTGCTACTGGAAA+AGG - chr4_4:60857083-60857102 None:intergenic 45.0%
TGGTAAAACGCACTTAGTGG+TGG + chr4_4:60857402-60857421 Msa0692370:intron 45.0%
GGTAAAACGCACTTAGTGGT+GGG + chr4_4:60857403-60857422 Msa0692370:intron 45.0%
AGCCAGCATGTTGACGTATT+TGG + chr4_4:60857573-60857592 Msa0692370:intron 45.0%
AGCAGTGAGGACTACAGTAT+AGG + chr4_4:60857730-60857749 Msa0692370:intron 45.0%
TCTTGGAAGTTGAGCTGCTA+TGG - chr4_4:60857854-60857873 None:intergenic 45.0%
! CCAGGTGAATGATCCTGTTT+TGG - chr4_4:60857964-60857983 None:intergenic 45.0%
CCAAAACAGGATCATTCACC+TGG + chr4_4:60857961-60857980 Msa0692370:CDS 45.0%
TACTGAGAAGTGGAACTTCC+AGG - chr4_4:60857982-60858001 None:intergenic 45.0%
! GTCTTTGGTGTACTGAGAAG+TGG - chr4_4:60857992-60858011 None:intergenic 45.0%
! ACTGAGGTTAGCTGAGTCTT+TGG - chr4_4:60858007-60858026 None:intergenic 45.0%
!! TCAATGGGAAAGTGCTCGTT+TGG + chr4_4:60858035-60858054 Msa0692370:CDS 45.0%
TCAAGACAAGGTGGAAGTGA+AGG - chr4_4:60858186-60858205 None:intergenic 45.0%
GGGAAGTTCAAAGTGGATGT+TGG - chr4_4:60858339-60858358 None:intergenic 45.0%
ACATCCACTTTGAACTTCCC+TGG + chr4_4:60858339-60858358 Msa0692370:CDS 45.0%
TGTTCCAGGGAAGTTCAAAG+TGG - chr4_4:60858346-60858365 None:intergenic 45.0%
AAGGAAGCAAGGTTGTTCCA+GGG - chr4_4:60858359-60858378 None:intergenic 45.0%
AAAGGAAGCAAGGTTGTTCC+AGG - chr4_4:60858360-60858379 None:intergenic 45.0%
ACTGGAAGAGGAACAGAAAG+AGG - chr4_4:60858384-60858403 None:intergenic 45.0%
ATAGGAGCAGAAACTGGAAG+AGG - chr4_4:60858396-60858415 None:intergenic 45.0%
CATAACACAGAAGGTGGTCA+TGG + chr4_4:60858516-60858535 Msa0692370:CDS 45.0%
TGATGATATTATGGCGGCTG+TGG + chr4_4:60858578-60858597 Msa0692370:CDS 45.0%
!! GTGGAAGCATTTAGAGCAAG+CGG + chr4_4:60858597-60858616 Msa0692370:CDS 45.0%
! GTTCTTCAAGTTCTTGAGGG+TGG + chr4_4:60858663-60858682 Msa0692370:CDS 45.0%
! AAATACCAACCAGCTTTGGC+AGG - chr4_4:60856820-60856839 None:intergenic 45.0%
GAAAGAGCTGCAGACTAAGA+TGG + chr4_4:60856949-60856968 Msa0692370:CDS 45.0%
! CTCTTTTTATGTCTGGTCGG+AGG - chr4_4:60856983-60857002 None:intergenic 45.0%
CTCCGACCAGACATAAAAAG+AGG + chr4_4:60856981-60857000 Msa0692370:CDS 45.0%
TTCATGCCCTTCTTGGAAAC+AGG + chr4_4:60857042-60857061 Msa0692370:CDS 45.0%
ATGTGGTCTGCTACTGGAAA+AGG - chr4_4:60857083-60857102 None:intergenic 45.0%
TGGTAAAACGCACTTAGTGG+TGG + chr4_4:60857402-60857421 Msa0692370:intron 45.0%
GGTAAAACGCACTTAGTGGT+GGG + chr4_4:60857403-60857422 Msa0692370:intron 45.0%
AGCCAGCATGTTGACGTATT+TGG + chr4_4:60857573-60857592 Msa0692370:intron 45.0%
AGCAGTGAGGACTACAGTAT+AGG + chr4_4:60857730-60857749 Msa0692370:intron 45.0%
TCTTGGAAGTTGAGCTGCTA+TGG - chr4_4:60857854-60857873 None:intergenic 45.0%
! CCAGGTGAATGATCCTGTTT+TGG - chr4_4:60857964-60857983 None:intergenic 45.0%
CCAAAACAGGATCATTCACC+TGG + chr4_4:60857961-60857980 Msa0692370:CDS 45.0%
TACTGAGAAGTGGAACTTCC+AGG - chr4_4:60857982-60858001 None:intergenic 45.0%
! GTCTTTGGTGTACTGAGAAG+TGG - chr4_4:60857992-60858011 None:intergenic 45.0%
! ACTGAGGTTAGCTGAGTCTT+TGG - chr4_4:60858007-60858026 None:intergenic 45.0%
!! TCAATGGGAAAGTGCTCGTT+TGG + chr4_4:60858035-60858054 Msa0692370:CDS 45.0%
TCAAGACAAGGTGGAAGTGA+AGG - chr4_4:60858186-60858205 None:intergenic 45.0%
GGGAAGTTCAAAGTGGATGT+TGG - chr4_4:60858339-60858358 None:intergenic 45.0%
ACATCCACTTTGAACTTCCC+TGG + chr4_4:60858339-60858358 Msa0692370:CDS 45.0%
TGTTCCAGGGAAGTTCAAAG+TGG - chr4_4:60858346-60858365 None:intergenic 45.0%
AAGGAAGCAAGGTTGTTCCA+GGG - chr4_4:60858359-60858378 None:intergenic 45.0%
AAAGGAAGCAAGGTTGTTCC+AGG - chr4_4:60858360-60858379 None:intergenic 45.0%
ACTGGAAGAGGAACAGAAAG+AGG - chr4_4:60858384-60858403 None:intergenic 45.0%
ATAGGAGCAGAAACTGGAAG+AGG - chr4_4:60858396-60858415 None:intergenic 45.0%
CATAACACAGAAGGTGGTCA+TGG + chr4_4:60858516-60858535 Msa0692370:CDS 45.0%
TGATGATATTATGGCGGCTG+TGG + chr4_4:60858578-60858597 Msa0692370:CDS 45.0%
!! GTGGAAGCATTTAGAGCAAG+CGG + chr4_4:60858597-60858616 Msa0692370:CDS 45.0%
! GTTCTTCAAGTTCTTGAGGG+TGG + chr4_4:60858663-60858682 Msa0692370:CDS 45.0%
!!! TATTTACATTTTTTATAAAA+AGG + chr4_4:60856912-60856931 Msa0692370:intron 5.0%
!!! ATTTACATTTTTTATAAAAA+GGG + chr4_4:60856913-60856932 Msa0692370:intron 5.0%
!!! TATTTACATTTTTTATAAAA+AGG + chr4_4:60856912-60856931 Msa0692370:intron 5.0%
!!! ATTTACATTTTTTATAAAAA+GGG + chr4_4:60856913-60856932 Msa0692370:intron 5.0%
CAGTGCTACATGTCCGTTCA+AGG + chr4_4:60857542-60857561 Msa0692370:intron 50.0%
CATGTCCGTTCAAGGTCTTG+AGG + chr4_4:60857550-60857569 Msa0692370:intron 50.0%
TGGCTCCTCAAGACCTTGAA+CGG - chr4_4:60857558-60857577 None:intergenic 50.0%
CTCAGCTAACCTCAGTCACA+TGG + chr4_4:60858011-60858030 Msa0692370:CDS 50.0%
ACCTCAGTCACATGGCTCAA+TGG + chr4_4:60858019-60858038 Msa0692370:CDS 50.0%
CCTCAGTCACATGGCTCAAT+GGG + chr4_4:60858020-60858039 Msa0692370:CDS 50.0%
AAAAGTCTTGCAGGTGGCTG+TGG - chr4_4:60858135-60858154 None:intergenic 50.0%
! GAAGCATTTAGAGCAAGCGG+AGG + chr4_4:60858600-60858619 Msa0692370:CDS 50.0%
CTTGAGGGTGGTGATCAAGA+TGG + chr4_4:60858675-60858694 Msa0692370:CDS 50.0%
CAGTGCTACATGTCCGTTCA+AGG + chr4_4:60857542-60857561 Msa0692370:intron 50.0%
CATGTCCGTTCAAGGTCTTG+AGG + chr4_4:60857550-60857569 Msa0692370:intron 50.0%
TGGCTCCTCAAGACCTTGAA+CGG - chr4_4:60857558-60857577 None:intergenic 50.0%
CTCAGCTAACCTCAGTCACA+TGG + chr4_4:60858011-60858030 Msa0692370:CDS 50.0%
ACCTCAGTCACATGGCTCAA+TGG + chr4_4:60858019-60858038 Msa0692370:CDS 50.0%
CCTCAGTCACATGGCTCAAT+GGG + chr4_4:60858020-60858039 Msa0692370:CDS 50.0%
AAAAGTCTTGCAGGTGGCTG+TGG - chr4_4:60858135-60858154 None:intergenic 50.0%
! GAAGCATTTAGAGCAAGCGG+AGG + chr4_4:60858600-60858619 Msa0692370:CDS 50.0%
CTTGAGGGTGGTGATCAAGA+TGG + chr4_4:60858675-60858694 Msa0692370:CDS 50.0%
GAAAGGACCATGGACTCCTG+AGG + chr4_4:60856735-60856754 Msa0692370:CDS 55.0%
TGGTCTTCCTCAGGAGTCCA+TGG - chr4_4:60856745-60856764 None:intergenic 55.0%
CATTGCCTGCCAAAGCTGGT+TGG + chr4_4:60856812-60856831 Msa0692370:intron 55.0%
CCCATTGAGCCATGTGACTG+AGG - chr4_4:60858023-60858042 None:intergenic 55.0%
!! TGCAGGTGGCTGTGGTTTTG+AGG - chr4_4:60858127-60858146 None:intergenic 55.0%
GAAAGGACCATGGACTCCTG+AGG + chr4_4:60856735-60856754 Msa0692370:CDS 55.0%
TGGTCTTCCTCAGGAGTCCA+TGG - chr4_4:60856745-60856764 None:intergenic 55.0%
CATTGCCTGCCAAAGCTGGT+TGG + chr4_4:60856812-60856831 Msa0692370:intron 55.0%
CCCATTGAGCCATGTGACTG+AGG - chr4_4:60858023-60858042 None:intergenic 55.0%
!! TGCAGGTGGCTGTGGTTTTG+AGG - chr4_4:60858127-60858146 None:intergenic 55.0%
CGTGCATTGCCTGCCAAAGC+TGG + chr4_4:60856808-60856827 Msa0692370:CDS 60.0%
CGTGCATTGCCTGCCAAAGC+TGG + chr4_4:60856808-60856827 Msa0692370:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 60856592 60858905 60856592 ID=Msa0692370;Name=Msa0692370
chr4_4 mRNA 60856592 60858905 60856592 ID=Msa0692370-mRNA-1;Parent=Msa0692370;Name=Msa0692370-mRNA-1;_AED=0.21;_eAED=0.21;_QI=105|1|1|1|1|1|3|108|405
chr4_4 exon 60856592 60856829 60856592 ID=Msa0692370-mRNA-1:exon:16728;Parent=Msa0692370-mRNA-1
chr4_4 exon 60856934 60857063 60856934 ID=Msa0692370-mRNA-1:exon:16729;Parent=Msa0692370-mRNA-1
chr4_4 exon 60857843 60858905 60857843 ID=Msa0692370-mRNA-1:exon:16730;Parent=Msa0692370-mRNA-1
chr4_4 five_prime_UTR 60856592 60856696 60856592 ID=Msa0692370-mRNA-1:five_prime_utr;Parent=Msa0692370-mRNA-1
chr4_4 CDS 60856697 60856829 60856697 ID=Msa0692370-mRNA-1:cds;Parent=Msa0692370-mRNA-1
chr4_4 CDS 60856934 60857063 60856934 ID=Msa0692370-mRNA-1:cds;Parent=Msa0692370-mRNA-1
chr4_4 CDS 60857843 60858797 60857843 ID=Msa0692370-mRNA-1:cds;Parent=Msa0692370-mRNA-1
chr4_4 three_prime_UTR 60858798 60858905 60858798 ID=Msa0692370-mRNA-1:three_prime_utr;Parent=Msa0692370-mRNA-1
Gene Sequence

>Msa0692370

ATGGGTAGGTCACCTTGTTGTGAGAAAGTTGGATTGAAGAAAGGACCATGGACTCCTGAGGAAGACCAAAAACTCATAGCTTATATTGAAGAATTTGGTCATGGAAGCTGGCGTGCATTGCCTGCCAAAGCTGGGCTTCAAAGATGTGGAAAGAGCTGCAGACTAAGATGGACTAACTACCTCCGACCAGACATAAAAAGAGGAAAGTTTAGTTTGCAGGAAGAGCAAACTATTATTCAACTTCATGCCCTTCTTGGAAACAGATGGTCAGCCATAGCAGCTCAACTTCCAAGAAGAACAGACAATGAAATCAAGAACTACTGGAACACACACCTCAAGAAAAGACTAACAAGAATGGGAATAGACCCTACAACTCACAAACCAAAACAGGATCATTCACCTGGAAGTTCCACTTCTCAGTACACCAAAGACTCAGCTAACCTCAGTCACATGGCTCAATGGGAAAGTGCTCGTTTGGAAGCAGAAGCAAGACTTGTTAGAGAAACCAATAAACTGAAAGTTCAAAGACAACTTGAGTTTGAATCCTCAAAACCACAGCCACCTGCAAGACTTTTTCTCAACAAAATCACACCATTGATTCAACCTTCACTTCCACCTTGTCTTGATATCCTCAAAGCATGGCAAAGTTCATGGTCTAAACCAACAACATCAACAACCAAAGATGACTCAAACAATAACAACAACAAAATGCATAGTATGTATGCTATGATGTTATCCAATGATGATCTTGAATCTCCAACATCCACTTTGAACTTCCCTGGAACAACCTTGCTTCCTTTACCTCTTTCTGTTCCTCTTCCAGTTTCTGCTCCTATGACAAACAATAATATTGAACCATTCAATCAAAGTTTACTTCCTTTAACCAACAACACCAATGATGATGATGAGATATGGAAACAATTCAATTTAACTAAGCATAACACAGAAGGTGGTCATGGTCATGATAACAATAACACTATGTTGAACTTTCAGCAAGATGATGATATTATGGCGGCTGTGGAAGCATTTAGAGCAAGCGGAGGATTTGATAATAATATCAATACACCTCCTATTTCAACAAATGTTCTTCAAGTTCTTGAGGGTGGTGATCAAGATGGAAGCATAATGTGTAACGTGAATCTCGAGGAGAATAAGCATTATTGGAATAGCATACTTGGTTTGGTTAATGAATCTGATGATATGAACATGGTCCTATAA
Protein sequence

>Msa0692370

MGRSPCCEKVGLKKGPWTPEEDQKLIAYIEEFGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIAAQLPRRTDNEIKNYWNTHLKKRLTRMGIDPTTHKPKQDHSPGSSTSQYTKDSANLSHMAQWESARLEAEARLVRETNKLKVQRQLEFESSKPQPPARLFLNKITPLIQPSLPPCLDILKAWQSSWSKPTTSTTKDDSNNNNNKMHSMYAMMLSNDDLESPTSTLNFPGTTLLPLPLSVPLPVSAPMTNNNIEPFNQSLLPLTNNTNDDDEIWKQFNLTKHNTEGGHGHDNNNTMLNFQQDDDIMAAVEAFRASGGFDNNINTPPISTNVLQVLEGGDQDGSIMCNVNLEENKHYWNSILGLVNESDDMNMVL*