AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0696340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0696340 MtrunA17_Chr4g0048531 95.101 1286 57 5 1 1284 1 1282 0.0 2422
Msa0696340 MtrunA17_Chr2g0281051 62.392 577 188 7 708 1281 407 957 0.0 711
Msa0696340 MtrunA17_Chr2g0281051 50.099 503 181 11 6 500 4 444 1.89e-121 401
Msa0696340 MtrunA17_Chr7g0275771 41.084 572 307 11 727 1281 369 927 4.48e-126 412
Msa0696340 MtrunA17_Chr7g0275771 30.357 280 159 8 259 535 140 386 7.39e-30 128
Msa0696340 MtrunA17_Chr1g0183311 39.292 565 279 15 727 1280 367 878 2.52e-109 365
Msa0696340 MtrunA17_Chr1g0183311 33.831 201 122 5 259 454 144 338 3.08e-20 97.4
Msa0696340 MtrunA17_Chr4g0075261 35.357 560 285 11 727 1280 378 866 1.25e-95 327
Msa0696340 MtrunA17_Chr4g0075261 33.878 245 146 6 257 500 166 395 1.56e-31 134
Msa0696340 MtrunA17_Chr1g0192011 33.803 568 310 12 722 1281 454 963 3.31e-91 317
Msa0696340 MtrunA17_Chr1g0192011 27.562 283 171 7 153 424 162 421 6.42e-24 109
Msa0696340 MtrunA17_Chr5g0420361 33.895 534 281 17 740 1262 307 779 4.87e-69 249
Msa0696340 MtrunA17_Chr5g0420361 36.364 88 55 1 346 432 157 244 1.02e-11 69.7
Msa0696340 MtrunA17_Chr1g0211711 42.671 307 157 7 720 1016 557 854 1.77e-64 239
Msa0696340 MtrunA17_Chr1g0211711 53.741 147 67 1 1134 1279 903 1049 1.91e-45 179
Msa0696340 MtrunA17_Chr1g0211711 35.795 176 102 3 259 431 343 510 1.08e-26 118
Msa0696340 MtrunA17_Chr1g0211691 42.667 300 156 7 727 1016 566 859 4.91e-62 230
Msa0696340 MtrunA17_Chr1g0211691 33.939 165 93 4 259 416 342 497 1.84e-17 88.6
Msa0696340 MtrunA17_Chr1g0211661 42.230 296 162 5 727 1016 447 739 1.45e-61 228
Msa0696340 MtrunA17_Chr1g0211661 53.933 89 40 1 1134 1221 777 865 9.44e-24 108
Msa0696340 MtrunA17_Chr1g0211661 36.478 159 94 3 259 416 225 377 4.24e-22 103
Msa0696340 MtrunA17_Chr1g0147021 42.446 278 150 6 727 999 1067 1339 9.85e-61 229
Msa0696340 MtrunA17_Chr1g0147021 52.632 152 71 1 1130 1280 1546 1697 1.23e-45 181
Msa0696340 MtrunA17_Chr1g0147021 29.210 291 147 9 248 525 859 1103 1.65e-23 108
Msa0696340 MtrunA17_Chr6g0472441 30.018 553 287 16 727 1267 242 706 1.20e-58 216
Msa0696340 MtrunA17_Chr5g0426961 38.721 297 171 5 727 1016 363 655 1.46e-58 218
Msa0696340 MtrunA17_Chr5g0426961 53.378 148 65 2 1134 1280 687 831 1.55e-43 171
Msa0696340 MtrunA17_Chr5g0426961 31.746 189 121 3 229 416 112 293 1.16e-22 105
Msa0696340 MtrunA17_Chr5g0448301 37.746 355 193 12 727 1066 242 583 1.55e-57 211
Msa0696340 MtrunA17_Chr5g0448301 55.932 59 25 1 1134 1191 573 631 6.41e-12 70.1
Msa0696340 MtrunA17_Chr2g0289091 33.413 416 207 7 881 1242 20 419 2.85e-56 202
Msa0696340 MtrunA17_Chr2g0289121 33.433 335 197 6 736 1066 372 684 2.81e-43 171
Msa0696340 MtrunA17_Chr2g0289121 48.684 152 77 1 1130 1280 670 821 2.94e-40 161
Msa0696340 MtrunA17_Chr2g0289121 36.757 185 106 4 254 437 152 326 1.46e-25 114
Msa0696340 MtrunA17_Chr2g0289031 43.192 213 116 2 811 1018 8 220 1.52e-42 160
Msa0696340 MtrunA17_Chr2g0289031 44.516 155 85 1 1127 1280 241 395 7.80e-38 147
Msa0696340 MtrunA17_Chr1g0211701 50.442 113 56 0 1167 1279 4 116 2.90e-35 132
Msa0696340 MtrunA17_Chr8g0361381 38.710 186 109 2 807 990 26 208 1.30e-33 129
Msa0696340 MtrunA17_Chr7g0231061 48.462 130 63 3 889 1015 30 158 3.77e-28 113
Msa0696340 MtrunA17_Chr2g0289041 33.180 217 129 5 280 493 1 204 3.66e-27 110
Msa0696340 MtrunA17_Chr8g0361391 49.020 102 47 3 1130 1227 46 146 1.55e-24 101
Msa0696340 MtrunA17_Chr8g0340381 46.988 83 38 3 905 985 36 114 6.59e-13 68.9
Msa0696340 MtrunA17_Chr1g0211671 40.984 61 36 0 1223 1283 18 78 1.60e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0696340 AT4G00990.1 37.815 595 324 13 701 1280 268 831 3.37e-122 400
Msa0696340 AT4G00990.1 29.682 283 138 9 259 535 80 307 4.39e-25 113
Msa0696340 AT4G00990.3 36.704 534 292 14 701 1219 268 770 1.90e-99 335
Msa0696340 AT4G00990.3 29.682 283 138 9 259 535 80 307 3.54e-25 113
Msa0696340 AT4G00990.2 36.517 534 293 13 701 1219 268 770 2.67e-99 335
Msa0696340 AT4G00990.2 29.682 283 138 9 259 535 80 307 3.89e-25 113
Msa0696340 AT4G21430.1 39.952 413 208 10 11 418 5 382 1.17e-71 259
Msa0696340 AT4G21430.1 43.448 290 154 4 729 1014 412 695 6.65e-71 257
Msa0696340 AT4G21430.1 57.233 159 68 0 1123 1281 757 915 5.52e-52 199
Msa0696340 AT1G09060.2 30.756 582 323 13 707 1281 385 893 4.53e-70 254
Msa0696340 AT1G09060.2 23.494 498 273 11 13 501 24 422 7.92e-33 138
Msa0696340 AT1G09060.1 30.756 582 323 13 707 1281 385 893 4.53e-70 254
Msa0696340 AT1G09060.1 23.494 498 273 11 13 501 24 422 7.92e-33 138
Msa0696340 AT1G09060.4 30.756 582 323 13 707 1281 399 907 6.34e-70 254
Msa0696340 AT1G09060.4 23.494 498 273 11 13 501 38 436 9.19e-33 138
Msa0696340 AT1G09060.3 30.756 582 323 13 707 1281 399 907 6.34e-70 254
Msa0696340 AT1G09060.3 23.494 498 273 11 13 501 38 436 9.19e-33 138
Msa0696340 AT1G62310.1 42.671 307 162 5 727 1028 424 721 3.83e-64 236
Msa0696340 AT1G62310.1 53.623 138 63 1 1131 1267 746 883 1.17e-39 160
Msa0696340 AT1G62310.1 31.873 251 144 6 259 500 209 441 2.75e-30 130
Msa0696340 AT1G11950.2 37.240 384 223 7 712 1088 391 763 9.50e-63 231
Msa0696340 AT1G11950.2 26.087 460 250 15 101 535 29 423 2.37e-25 114
Msa0696340 AT1G11950.2 57.143 84 35 1 1129 1211 718 801 3.90e-21 100
Msa0696340 AT1G11950.1 37.240 384 223 7 712 1088 391 763 1.40e-62 231
Msa0696340 AT1G11950.1 54.248 153 69 1 1129 1280 718 870 1.65e-46 181
Msa0696340 AT1G11950.1 26.464 461 247 16 101 535 29 423 3.56e-25 114
Msa0696340 AT1G11950.3 37.240 384 223 7 712 1088 391 763 1.40e-62 231
Msa0696340 AT1G11950.3 54.248 153 69 1 1129 1280 718 870 1.65e-46 181
Msa0696340 AT1G11950.3 26.464 461 247 16 101 535 29 423 3.56e-25 114
Msa0696340 AT3G07610.1 38.790 281 164 5 737 1011 429 707 3.04e-51 197
Msa0696340 AT3G07610.1 51.034 145 70 1 1134 1277 746 890 7.50e-41 164
Msa0696340 AT3G07610.1 31.977 172 109 4 259 429 155 319 2.52e-20 98.2
Msa0696340 AT3G07610.2 39.080 261 151 5 737 991 429 687 2.97e-46 179
Msa0696340 AT3G07610.2 31.977 172 109 4 259 429 155 319 7.96e-20 96.3
Msa0696340 AT3G07610.3 38.996 259 150 5 737 989 429 685 9.56e-46 180
Msa0696340 AT3G07610.3 51.034 145 70 1 1134 1277 768 912 8.23e-41 164
Msa0696340 AT3G07610.3 31.977 172 109 4 259 429 155 319 2.73e-20 98.2

Find 288 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTATTCTTCTTCTTAT+TGG 0.085338 4_4:+66347193 None:intergenic
TTTATTTAGGTTGTGCCTTA+TGG 0.168029 4_4:-66346858 Msa0696340:intron
CAAATCAAGCAGGTTGAATT+TGG 0.184918 4_4:-66345722 Msa0696340:CDS
AATATATTTATTTCAGCTTC+AGG 0.233542 4_4:+66341266 None:intergenic
CGACAGTGAGCACCGTATTT+TGG 0.239480 4_4:-66345448 Msa0696340:CDS
GAGCTTTCAGCGGGACTTCT+AGG 0.264344 4_4:+66342450 None:intergenic
GAAGCTGAAATAAATATATT+TGG 0.265808 4_4:-66341263 Msa0696340:three_prime_UTR
TGCAAATTAAATAATGAAAA+TGG 0.281180 4_4:+66345925 None:intergenic
AATTGTAATGACAGCGAAAA+AGG 0.283370 4_4:-66345156 Msa0696340:CDS
GGATCTTATAAGAATGGTTT+TGG 0.295714 4_4:-66347249 Msa0696340:CDS
ATCTGGAAGGTACTTATAAA+TGG 0.298207 4_4:-66341339 Msa0696340:three_prime_UTR
TTATGTCAAGGAAGAACTTC+TGG 0.298386 4_4:-66345522 Msa0696340:CDS
CATAAAGACTTCAGTCTTAG+AGG 0.312350 4_4:+66341421 None:intergenic
AGCAACCCTATCAATATTCT+TGG 0.316108 4_4:+66346968 None:intergenic
TCGTTAACAGATTCACCTTC+TGG 0.323116 4_4:-66347320 Msa0696340:CDS
GTGCAAGTCCGTTGACAAAC+TGG 0.326947 4_4:+66346137 None:intergenic
GATTCTGAACCCTCTCTTCA+TGG 0.331186 4_4:-66342498 Msa0696340:CDS
ATGTTCCCCTTCTTCAAGTT+TGG 0.332985 4_4:+66346834 None:intergenic
AACATCATACAATACAAATA+AGG 0.345311 4_4:+66341298 None:intergenic
AGACCTTAGAATTCCTTATC+TGG 0.347753 4_4:+66341988 None:intergenic
TTCTTCAAGTTTGGTCCATA+AGG 0.350153 4_4:+66346843 None:intergenic
CTGTTGCTAGCTCAGTTTCT+CGG 0.354130 4_4:+66345868 None:intergenic
GGTTGCTCTTGGAAAGTTGC+AGG 0.358083 4_4:-66346952 Msa0696340:intron
TCAGGTCCAAGAATATTGAT+AGG 0.363284 4_4:-66346974 Msa0696340:CDS
ATCCCTTTCACTTCCCGTTC+AGG 0.368327 4_4:+66342702 None:intergenic
CGATATTCCGTTCTCCGTCC+TGG 0.368695 4_4:+66342526 None:intergenic
GCTGAAGAAACGGTACAAAA+AGG 0.370442 4_4:-66342666 Msa0696340:CDS
CAGCTTCTCCAACATGTTGC+TGG 0.371868 4_4:+66342036 None:intergenic
CACTGAGCTGTTACCTGAAC+GGG 0.373896 4_4:-66342715 Msa0696340:CDS
ATCATTACAATTTGTATGCT+CGG 0.378765 4_4:+66345272 None:intergenic
AGAGTTACTTGAATCCTGTT+TGG 0.378807 4_4:-66344182 Msa0696340:CDS
TCAACGGACTTGCACTTGTA+AGG 0.380103 4_4:-66346129 Msa0696340:CDS
GATTATATCGATCAGTATTA+AGG 0.380811 4_4:+66344434 None:intergenic
TATCATTACCATTTGTCCTC+TGG 0.385531 4_4:+66345376 None:intergenic
GCGTAAGAACAAGGAAGAAC+AGG 0.385654 4_4:-66347462 Msa0696340:CDS
CTGTAACGCCGCATTACTTC+AGG 0.387375 4_4:-66346992 Msa0696340:CDS
TTAATGTATTCTACGAGCTT+TGG 0.390486 4_4:+66342357 None:intergenic
AAAATGCTCTGATCTAGAAT+TGG 0.393375 4_4:+66342207 None:intergenic
AACTGAGGTTTGATGTACTT+TGG 0.399437 4_4:+66344269 None:intergenic
ATCATTACAATTTGTCATCT+CGG 0.400620 4_4:+66345065 None:intergenic
GATATCTCCATTACTCCATT+TGG 0.404791 4_4:+66347092 None:intergenic
GTTACAGTGAAAATATTTGC+TGG 0.406275 4_4:-66345700 Msa0696340:intron
ATCATTACAATTTGTCCTCT+CGG 0.408639 4_4:+66344645 None:intergenic
ATCATTACAATTTGTCCTCT+CGG 0.408639 4_4:+66344855 None:intergenic
ATCATTACCATTTGTCCTCT+GGG 0.408717 4_4:+66345377 None:intergenic
GAAACTGCTCTTTGAATACT+TGG 0.409438 4_4:+66343807 None:intergenic
GTCTGACCTCGTCAATCAAC+TGG 0.414789 4_4:+66341712 None:intergenic
AGATGACAAATTGTAATGAT+AGG 0.416804 4_4:-66345062 Msa0696340:CDS
TTCTAAATAGGTGAAGAAAA+TGG 0.420597 4_4:-66341530 Msa0696340:intron
TCATTACAATTTGTCCTCTC+TGG 0.422205 4_4:+66344751 None:intergenic
ACATCTTGCATCTCCTCAAC+TGG 0.424879 4_4:-66342591 Msa0696340:CDS
TGTGAGATTCATTATCTTCA+AGG 0.428955 4_4:-66347539 Msa0696340:CDS
GGGACTTCTAGGTGACAAAT+TGG 0.429038 4_4:+66342461 None:intergenic
ACAATGTGGAAGAAACAGTT+AGG 0.430854 4_4:-66347415 Msa0696340:CDS
ACAATTGGATCTTATAAGAA+TGG 0.431045 4_4:-66347255 Msa0696340:CDS
CCTTGTGGCAGCTCGAACAC+TGG 0.432844 4_4:+66346763 None:intergenic
GGATTCATGTATTCTTGAAC+TGG 0.442812 4_4:+66343752 None:intergenic
TCCTACGGAGCTTGGTGGAC+GGG 0.442880 4_4:-66344812 Msa0696340:CDS
TTTCAGAAACACTGGGGAAA+AGG 0.444483 4_4:-66344319 Msa0696340:CDS
TCATTACAATTTGTCCTCTC+AGG 0.447184 4_4:+66345168 None:intergenic
AAGTAGCAGTTAAATCAAAT+AGG 0.448870 4_4:+66345304 None:intergenic
ATGTACTTTGGAGCACATCT+TGG 0.448998 4_4:+66344281 None:intergenic
ATCACTAAAATTGGTCATCT+CGG 0.449833 4_4:+66344960 None:intergenic
AATATTGATAGGGTTGCTCT+TGG 0.454724 4_4:-66346963 Msa0696340:CDS
TCATTACAATTTGTCATCTC+GGG 0.455911 4_4:+66345066 None:intergenic
AGCACATCTTGGACCACTAT+AGG 0.456305 4_4:+66344292 None:intergenic
TGCTCAAACTCATTAAGATC+TGG 0.456332 4_4:-66341356 Msa0696340:three_prime_UTR
TAATCACCCGGCGTCGAAGC+AGG 0.456980 4_4:+66347068 None:intergenic
GCATGCATGTTTAGTTTCGC+TGG 0.457917 4_4:+66341443 None:intergenic
TGCCCTCCTACGGAGCTTGA+TGG 0.458504 4_4:-66345027 Msa0696340:CDS
GATTCAAAGAATCACTTCTC+TGG 0.459014 4_4:+66346790 None:intergenic
CTGGTTGTCCGTACCAGATA+AGG 0.461242 4_4:-66342001 Msa0696340:CDS
GAAGCAATGTGATACACAAT+TGG 0.461470 4_4:-66347270 Msa0696340:CDS
GCACAAAGCTCTGTGTCAAA+TGG 0.462122 4_4:-66342748 Msa0696340:CDS
CCTATGGAGCTTGGTGGATG+TGG 0.464121 4_4:-66345228 Msa0696340:CDS
AAGTAATGGCAGTGAAAGTA+AGG 0.468390 4_4:-66346090 Msa0696340:CDS
AAAAGTATCATGCCCTCCTA+TGG 0.468733 4_4:-66345244 Msa0696340:CDS
GAGCTTGATGGACGAGATAC+AGG 0.469107 4_4:-66345015 Msa0696340:CDS
CTATGACTTTCCTGAAACTT+CGG 0.470452 4_4:-66344494 Msa0696340:CDS
GAGCTTGGTGGATGTGGTAC+AGG 0.470607 4_4:-66345222 Msa0696340:CDS
AACCTCACACCAATCCAAAC+AGG 0.473499 4_4:+66344168 None:intergenic
CACCGGAGTTCGTCCGGTAG+AGG 0.474258 4_4:+66347623 None:intergenic
AAAGTACATCAAACCTCAGT+TGG 0.475272 4_4:-66344267 Msa0696340:CDS
TCATTACAATTTGTATGCTC+GGG 0.475307 4_4:+66345273 None:intergenic
TCATGTTTCGGACTCCCGTC+TGG 0.475731 4_4:+66343695 None:intergenic
GTACCAGATAAGGAATTCTA+AGG 0.475903 4_4:-66341991 Msa0696340:intron
TCATTACAATTTGTCCTCTC+GGG 0.476548 4_4:+66344646 None:intergenic
TCATTACAATTTGTCCTCTC+GGG 0.476548 4_4:+66344856 None:intergenic
TCACTGCAAAACACCTGTCT+TGG 0.476800 4_4:-66345604 Msa0696340:CDS
TACTTGAATCCTGTTTGGAT+TGG 0.477458 4_4:-66344177 Msa0696340:CDS
GAGCTTGGTGGACGAGATAC+AGG 0.478036 4_4:-66345117 Msa0696340:CDS
TATGGCCCAATGTCATGTTT+CGG 0.478824 4_4:+66343683 None:intergenic
TGAAGAAGGGGAACATTAAG+AGG 0.479996 4_4:-66346827 Msa0696340:CDS
CTTCCGCACCGGAGTTCGTC+CGG 0.481016 4_4:+66347617 None:intergenic
GAGCTTGGTGGATGTGGTAC+AGG 0.482145 4_4:-66344595 Msa0696340:CDS
GATATTCCGTTCTCCGTCCT+GGG 0.484271 4_4:+66342527 None:intergenic
CTCCTACGGAGCTTGGTGGA+CGG 0.487081 4_4:-66344813 Msa0696340:CDS
ACATTGCCCCAGAGGACAAA+TGG 0.487539 4_4:-66345384 Msa0696340:CDS
CTCTGAAGCTTCAAAGACTC+TGG 0.487745 4_4:+66347488 None:intergenic
TGGAGAGAGAAGTTGAGAAG+AGG 0.488065 4_4:-66347229 Msa0696340:CDS
ATATCACCTGCTTCGACGCC+GGG 0.490564 4_4:-66347074 Msa0696340:CDS
GAATACATGAATCCTGTGTC+TGG 0.490993 4_4:-66343743 Msa0696340:CDS
AAAGGTGATTAAAGAAGAAG+TGG 0.491533 4_4:-66347156 Msa0696340:CDS
TCACTTATTCGCTTTAGTAA+TGG 0.492198 4_4:+66345894 None:intergenic
AAGTAAGGACAGTGAAAGTA+AGG 0.492428 4_4:-66346075 Msa0696340:intron
ATATATTTATTTCAGCTTCA+GGG 0.492929 4_4:+66341267 None:intergenic
TAGCTGCAAATTTGCCAGAC+GGG 0.492947 4_4:-66343709 Msa0696340:CDS
TTCGTCCGGTAGAGGCTCCT+CGG 0.494714 4_4:+66347631 None:intergenic
TTCAATGTCTTCTTCCTCGC+AGG 0.496109 4_4:+66347290 None:intergenic
GATATCACCTGCTTCGACGC+CGG 0.498508 4_4:-66347075 Msa0696340:CDS
ATTCCTTCTTTCCCCATACT+CGG 0.499857 4_4:+66342639 None:intergenic
ATTCTGAACCCTCTCTTCAT+GGG 0.500401 4_4:-66342497 Msa0696340:CDS
CCTACGGAGCTTGGTGGATG+TGG 0.500603 4_4:-66344601 Msa0696340:CDS
TCCCGTCGGTTCTTCCGCAC+CGG 0.504790 4_4:+66347606 None:intergenic
TTGAGCACTTTCAGAAACAC+TGG 0.506615 4_4:-66344327 Msa0696340:CDS
TGTCCTTCTGATCCAAAATA+CGG 0.506979 4_4:+66345436 None:intergenic
TGCCGTCCTACGGAGGTTGG+TGG 0.510296 4_4:-66345339 Msa0696340:CDS
TCACTAAAATTGGTCATCTC+GGG 0.512183 4_4:+66344961 None:intergenic
TTCTGATATTCAAATCAAGC+AGG 0.514306 4_4:-66345732 Msa0696340:CDS
TCATGCCCTCCTATGGAGCT+TGG 0.515388 4_4:-66345237 Msa0696340:CDS
CCACATCCACCAAGCTCCAT+AGG 0.515620 4_4:+66345228 None:intergenic
GGAGTCCGAAACATGACATT+GGG 0.516011 4_4:-66343688 Msa0696340:CDS
TCATGCCCTCCTACGGAGCT+TGG 0.516173 4_4:-66344610 Msa0696340:CDS
TCATGCCCTCCTACGGAGCT+TGG 0.516173 4_4:-66344715 Msa0696340:CDS
TCATGCCCTCCTACGGAGCT+TGG 0.516173 4_4:-66344820 Msa0696340:CDS
TCATGCCCTCCTACGGAGCT+TGG 0.516173 4_4:-66345132 Msa0696340:CDS
GGCAGGTGGAAATAAACATT+AGG 0.516503 4_4:-66343913 Msa0696340:intron
TTGCACTTGTAAGGTCTGCT+TGG 0.519166 4_4:-66346120 Msa0696340:CDS
GCATCGTCAATATAGAGAAA+AGG 0.520257 4_4:-66347513 Msa0696340:CDS
TGCCCTCCTATGGAGCTTGG+TGG 0.523556 4_4:-66345234 Msa0696340:CDS
GTGTTGTGTCCATGCGGTAT+TGG 0.523572 4_4:-66341769 Msa0696340:CDS
CCATATGTCTATATTTCGTA+TGG 0.524574 4_4:-66343665 Msa0696340:CDS
ATACAACAAAGTGGGAGATA+AGG 0.528558 4_4:+66341384 None:intergenic
AGCCTCTACCGGACGAACTC+CGG 0.528675 4_4:-66347625 Msa0696340:CDS
CAGGAAGAAGAAACTGTTGT+TGG 0.529355 4_4:-66347443 Msa0696340:CDS
AGAATTACCAAATGGAGTAA+TGG 0.529396 4_4:-66347099 Msa0696340:CDS
TCATGCCCTCCTACGGAGCT+TGG 0.533099 4_4:-66344925 Msa0696340:CDS
GCATGAGATGCTGAAACTGA+AGG 0.533826 4_4:-66343843 Msa0696340:CDS
TGCCCTCCTACGGAGCTTGG+TGG 0.534853 4_4:-66344607 Msa0696340:CDS
GCTTTGATTGTATAAGAGAT+CGG 0.536835 4_4:-66346731 Msa0696340:intron
AGGAACAGTCCCATGAAGAG+AGG 0.537205 4_4:+66342488 None:intergenic
TTATGGACCAAACTTGAAGA+AGG 0.537455 4_4:-66346841 Msa0696340:CDS
CCATACGAAATATAGACATA+TGG 0.539244 4_4:+66343665 None:intergenic
GGAAGCAATGGCGGTGCAAG+AGG 0.539340 4_4:-66347586 Msa0696340:CDS
AAGTGGGAGATAAGGTAAGA+AGG 0.541666 4_4:+66341392 None:intergenic
GAAGCTGTCATCATTCCTGC+TGG 0.541668 4_4:-66342020 Msa0696340:CDS
TGCCCTCCTACGGAGCTTGG+TGG 0.541670 4_4:-66344712 Msa0696340:CDS
TGCCCTCCTACGGAGCTTGG+TGG 0.541670 4_4:-66344817 Msa0696340:CDS
TGCCCTCCTACGGAGCTTGG+TGG 0.541670 4_4:-66345129 Msa0696340:CDS
TTAGAATTCCTTATCTGGTA+CGG 0.541730 4_4:+66341993 None:intergenic
TTGAGGAGAGAATTACCAAA+TGG 0.544573 4_4:-66347107 Msa0696340:CDS
CAAAGCTTCATGCCGTCCTA+CGG 0.545180 4_4:-66345349 Msa0696340:CDS
CGTCCACCAAGCTCCGTAGG+AGG 0.545713 4_4:+66344814 None:intergenic
CATCCACCAAGCTCCGTAGG+AGG 0.545730 4_4:+66344604 None:intergenic
ATTATCACATGCTGAAGAAA+CGG 0.546233 4_4:-66342676 Msa0696340:CDS
GGCGACCGAGGAGCCTCTAC+CGG 0.548482 4_4:-66347636 Msa0696340:CDS
CTCGACTTTACTCAGAGAGA+TGG 0.548603 4_4:-66344545 Msa0696340:CDS
TTACCTGAACGGGAAGTGAA+AGG 0.550425 4_4:-66342705 Msa0696340:CDS
GTGAGATTCATTATCTTCAA+GGG 0.550820 4_4:-66347538 Msa0696340:CDS
CAGGTCCAAGAATATTGATA+GGG 0.551000 4_4:-66346973 Msa0696340:CDS
CAAGTTGTTCTGTAGAGAGA+GGG 0.552992 4_4:+66342796 None:intergenic
GGGAAAAGGCCAGCCTATAG+TGG 0.553086 4_4:-66344305 Msa0696340:CDS
ACTTATAAATGGATTAATCT+CGG 0.553401 4_4:-66341328 Msa0696340:three_prime_UTR
CTCCGGTGCGGAAGAACCGA+CGG 0.554178 4_4:-66347608 Msa0696340:CDS
CACTAGAAAAGAAGTTAAGA+AGG 0.555039 4_4:-66346165 Msa0696340:CDS
AAGTAGTAGTTAAATCAAGC+AGG 0.556864 4_4:+66345199 None:intergenic
TACCTGAACGGGAAGTGAAA+GGG 0.557390 4_4:-66342704 Msa0696340:CDS
TTCTCGGGAAAATTTAGATG+AGG 0.558134 4_4:+66347693 None:intergenic
TGAGCACTTTCAGAAACACT+GGG 0.558873 4_4:-66344326 Msa0696340:CDS
TCTCACAACATCTTAAGCAT+AGG 0.559014 4_4:+66345547 None:intergenic
TCATGCCGTCCTACGGAGGT+TGG 0.559836 4_4:-66345342 Msa0696340:CDS
GATCAGAAGGACATTTGTTG+TGG 0.560803 4_4:-66345426 Msa0696340:CDS
GAGCTTGGTGAATCTAGTAC+AGG 0.562985 4_4:-66344910 Msa0696340:CDS
AAGTAGCAGTTAAATCAAGC+AGG 0.563193 4_4:+66344782 None:intergenic
TTACCGAGTATGGGGAAAGA+AGG 0.564549 4_4:-66342642 Msa0696340:CDS
ATCTGGTACGGACAACCAGC+AGG 0.564576 4_4:+66342005 None:intergenic
GTCTTCGAAAGACATCCCAC+TGG 0.565818 4_4:+66342388 None:intergenic
AAAAGTATCATGCCCTCCTA+CGG 0.566246 4_4:-66345037 Msa0696340:CDS
TGCAAGTCCGTTGACAAACT+GGG 0.566613 4_4:+66346138 None:intergenic
GTCCACCAAGCTCCGTAGGA+GGG 0.566976 4_4:+66344815 None:intergenic
GATTCACCAAGCTCCGTAGG+AGG 0.568187 4_4:+66344919 None:intergenic
AAAAGTATCATGCCCTCCTA+CGG 0.573066 4_4:-66344722 Msa0696340:CDS
AAAAGTATCATGCCCTCCTA+CGG 0.573066 4_4:-66344932 Msa0696340:CDS
TACTCATGACTCTCACAAGA+AGG 0.573176 4_4:-66342310 Msa0696340:intron
GAAGAACCGACGGGAAGCAA+TGG 0.573561 4_4:-66347598 Msa0696340:CDS
CATCCACCAAGCTCCATAGG+AGG 0.573573 4_4:+66345231 None:intergenic
CGTCCACCAAGCTCCGTAGG+AGG 0.574916 4_4:+66344709 None:intergenic
CGTCCATCAAGCTCCGTAGG+AGG 0.574916 4_4:+66345024 None:intergenic
CGTCCACCAAGCTCCGTAGG+AGG 0.574916 4_4:+66345126 None:intergenic
TGGACTTTCCAGCAACATGT+TGG 0.575890 4_4:-66342044 Msa0696340:CDS
GTCCATCAAGCTCCGTAGGA+GGG 0.576712 4_4:+66345025 None:intergenic
AAAAGGATCATGCCCTCCTA+CGG 0.576719 4_4:-66345139 Msa0696340:CDS
CTAGATTCACCAAGCTCCGT+AGG 0.578422 4_4:+66344916 None:intergenic
CTACTTCAACATTGCCTGAG+AGG 0.580462 4_4:-66345182 Msa0696340:CDS
GCAAGTTGTTCTGTAGAGAG+AGG 0.581333 4_4:+66342795 None:intergenic
TGAGCATTCAGGTGCCCAGT+GGG 0.583742 4_4:-66342403 Msa0696340:CDS
AAAATCTTCATCGGCGACCG+AGG 0.584811 4_4:-66347648 Msa0696340:CDS
TATGGACCAAACTTGAAGAA+GGG 0.586556 4_4:-66346840 Msa0696340:CDS
TAATATTATGACACATTCTG+CGG 0.586792 4_4:-66342823 Msa0696340:CDS
ATATTTCCCAGGACGGAGAA+CGG 0.587382 4_4:-66342533 Msa0696340:CDS
CTTCTATGAAGATCCAAGAC+AGG 0.588015 4_4:+66345591 None:intergenic
ATTTATTTCAGCTTCAGGGA+AGG 0.588154 4_4:+66341271 None:intergenic
TAACAGTTAGAGCTTTCAGC+GGG 0.588178 4_4:+66342441 None:intergenic
CATATACAACAATATTTCCC+AGG 0.588215 4_4:-66342544 Msa0696340:CDS
CATCTTGGACCACTATAGGC+TGG 0.588424 4_4:+66344296 None:intergenic
ACTCATTGTGATGTGAAAGT+TGG 0.588649 4_4:-66347032 Msa0696340:CDS
AAAAGTATCATGCCCTCCTA+CGG 0.589079 4_4:-66344617 Msa0696340:CDS
AAAAGTATCATGCCCTCCTA+CGG 0.589079 4_4:-66344827 Msa0696340:CDS
TTGCAGAAAGCAGCTGAGAG+AGG 0.589642 4_4:-66344409 Msa0696340:CDS
GTCCACCAAGCTCCGTAGGA+GGG 0.589803 4_4:+66344710 None:intergenic
GTCCACCAAGCTCCGTAGGA+GGG 0.589803 4_4:+66345127 None:intergenic
TTATTCGCTTTAGTAATGGA+AGG 0.590215 4_4:+66345898 None:intergenic
ACATGTTGCTGGAAAGTCCA+TGG 0.592328 4_4:+66342047 None:intergenic
CCACATCCACCAAGCTCCGT+AGG 0.593986 4_4:+66344601 None:intergenic
GGGAGTCCGAAACATGACAT+TGG 0.594425 4_4:-66343689 Msa0696340:CDS
AATGGCGAGAAAATCTTCAT+CGG 0.597998 4_4:-66347657 Msa0696340:CDS
ATGGACCAAACTTGAAGAAG+GGG 0.598715 4_4:-66346839 Msa0696340:CDS
CTAGGTGACAAATTGGTGGT+AGG 0.600866 4_4:+66342468 None:intergenic
TCTCGTCCACCAAGCTCCGT+AGG 0.600890 4_4:+66344706 None:intergenic
TCTCGTCCACCAAGCTCCGT+AGG 0.600890 4_4:+66345123 None:intergenic
TCAGAGAAAGCGTAAGAACA+AGG 0.600918 4_4:-66347471 Msa0696340:CDS
AGCATTAGTATACAACAAAG+TGG 0.601153 4_4:+66341375 None:intergenic
ATCCTGTTTGGATTGGTGTG+AGG 0.602391 4_4:-66344170 Msa0696340:intron
ATTCACCAAGCTCCGTAGGA+GGG 0.603465 4_4:+66344920 None:intergenic
TTAGCTGCAAATTTGCCAGA+CGG 0.605746 4_4:-66343710 Msa0696340:CDS
ATCCACCAACCTCCGTAGGA+CGG 0.606205 4_4:+66345337 None:intergenic
CCACTGATGTCCAAAACTGT+AGG 0.606253 4_4:+66344358 None:intergenic
AGATGCTGAAACTGAAGGGA+TGG 0.606461 4_4:-66343838 Msa0696340:CDS
TCTCGTCCATCAAGCTCCGT+AGG 0.606493 4_4:+66345021 None:intergenic
GCACCGCCATTGCTTCCCGT+CGG 0.609777 4_4:+66347592 None:intergenic
AGGCGTGCCCAGTTTGTCAA+CGG 0.610240 4_4:-66346145 Msa0696340:CDS
AAACTGCTCTTTGAATACTT+GGG 0.610781 4_4:+66343808 None:intergenic
ATCCACCAAGCTCCGTAGGA+GGG 0.611716 4_4:+66344605 None:intergenic
GCATTAGTATACAACAAAGT+GGG 0.614047 4_4:+66341376 None:intergenic
CCACTGAGCTGTTACCTGAA+CGG 0.614084 4_4:-66342716 Msa0696340:CDS
CATCTCTCTGAGTAAAGTCG+AGG 0.614260 4_4:+66344546 None:intergenic
ATCTCTCTGAGTAAAGTCGA+GGG 0.615126 4_4:+66344547 None:intergenic
CAATGTGGAAGAAACAGTTA+GGG 0.617044 4_4:-66347414 Msa0696340:CDS
ATCCACCAAGCTCCATAGGA+GGG 0.617732 4_4:+66345232 None:intergenic
GAACCGACGGGAAGCAATGG+CGG 0.620984 4_4:-66347595 Msa0696340:CDS
ACACAAACTCCAATACCGCA+TGG 0.621779 4_4:+66341760 None:intergenic
GAGGTTGGTGGATGTGACAC+AGG 0.622366 4_4:-66345327 Msa0696340:CDS
AAATGCATAATAAATCAAGA+AGG 0.623493 4_4:+66344572 None:intergenic
TACAACAATATTTCCCAGGA+CGG 0.625560 4_4:-66342540 Msa0696340:CDS
CCAGTGTTCGAGCTGCCACA+AGG 0.629820 4_4:-66346763 Msa0696340:CDS
TATTCACAAAATGAGACTGA+AGG 0.630664 4_4:-66342175 Msa0696340:CDS
ACTTCTAGGTGACAAATTGG+TGG 0.632206 4_4:+66342464 None:intergenic
CAAACTCATTAAGATCTGGA+AGG 0.632399 4_4:-66341352 Msa0696340:three_prime_UTR
TCCCGTCCACCAAGCTCCGT+AGG 0.634155 4_4:+66344811 None:intergenic
GGAACAGTCCCATGAAGAGA+GGG 0.635259 4_4:+66342489 None:intergenic
AGTTGATTGACGAGGTCAGA+CGG 0.635385 4_4:-66341710 Msa0696340:CDS
TGAACAGTGGATTCCAACTG+AGG 0.636045 4_4:+66344254 None:intergenic
TGTTGTGAGAAATTATGTCA+AGG 0.636724 4_4:-66345534 Msa0696340:CDS
AGCTTCATGCCGTCCTACGG+AGG 0.637273 4_4:-66345346 Msa0696340:CDS
CATGAGATGCTGAAACTGAA+GGG 0.639571 4_4:-66343842 Msa0696340:CDS
GTCAATCAACTGGATACACT+CGG 0.642101 4_4:+66341722 None:intergenic
CTACTTCAACATTGCCAGAG+AGG 0.643143 4_4:-66344765 Msa0696340:CDS
CAACTTCAACATTGCCCCAG+AGG 0.647616 4_4:-66345392 Msa0696340:CDS
TGTTGTTGGTGTTGACAATG+TGG 0.649587 4_4:-66347429 Msa0696340:CDS
CTACTTCAACATTGCCCGAG+AGG 0.649882 4_4:-66344870 Msa0696340:CDS
TCCGGTGCGGAAGAACCGAC+GGG 0.650388 4_4:-66347607 Msa0696340:CDS
GTCGTCCTCAGAGAAACACT+TGG 0.650712 4_4:-66343865 Msa0696340:CDS
AGCAAAAGTAGACAAGCTTG+AGG 0.653326 4_4:-66341670 Msa0696340:intron
CTACTTCAACGTCGCCCGAG+AGG 0.654189 4_4:-66344660 Msa0696340:CDS
AGGACGACATTTGAGAGACC+CGG 0.654680 4_4:+66343880 None:intergenic
TCTTCGAAAGACATCCCACT+GGG 0.657045 4_4:+66342389 None:intergenic
CTGAGCATTCAGGTGCCCAG+TGG 0.657262 4_4:-66342404 Msa0696340:CDS
CTCGCAGGAACAGAACCAGA+AGG 0.658573 4_4:+66347305 None:intergenic
TTCTTGGACCTGAAGTAATG+CGG 0.661293 4_4:+66346984 None:intergenic
TCACAAAATGAGACTGAAGG+AGG 0.663151 4_4:-66342172 Msa0696340:CDS
TCATTACCATTTGTCCTCTG+GGG 0.668041 4_4:+66345378 None:intergenic
ATATCGATCAGTATTAAGGT+CGG 0.668458 4_4:+66344438 None:intergenic
CTTCTGGTTCTGTTCCTGCG+AGG 0.671527 4_4:-66347304 Msa0696340:CDS
GCGGTGCAAGAGGAGAGTGA+TGG 0.671559 4_4:-66347576 Msa0696340:CDS
ATAACAGTTAGAGCTTTCAG+CGG 0.672646 4_4:+66342440 None:intergenic
TCACATCCACCAACCTCCGT+AGG 0.674018 4_4:+66345333 None:intergenic
TGAACGGGAAGTGAAAGGGA+TGG 0.677958 4_4:-66342700 Msa0696340:CDS
TCATGCCAAGTGTTTCTCTG+AGG 0.692066 4_4:+66343860 None:intergenic
CTGTTGTGACTCATATGATG+TGG 0.696455 4_4:-66343606 Msa0696340:intron
AAATTCAGAAGACCAGACAC+AGG 0.697394 4_4:+66343731 None:intergenic
TGCTTGGCAAGTGAAAGTAA+TGG 0.699374 4_4:-66346104 Msa0696340:CDS
CCGTTCAGGTAACAGCTCAG+TGG 0.700038 4_4:+66342716 None:intergenic
TAAGTACAGAACATGAACAG+TGG 0.701247 4_4:+66344241 None:intergenic
GTGTATCCAGTTGATTGACG+AGG 0.702237 4_4:-66341718 Msa0696340:CDS
CTACCGGACGAACTCCGGTG+CGG 0.702661 4_4:-66347620 Msa0696340:CDS
TATTACCAGAGATTGAACCA+TGG 0.720180 4_4:-66342064 Msa0696340:intron
GAGCACTTTCAGAAACACTG+GGG 0.743918 4_4:-66344325 Msa0696340:CDS
TCTGCAGTGTTGTGTCCATG+CGG 0.768724 4_4:-66341775 Msa0696340:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAAATTCATTTTTATATATT+AGG + chr4_4:66345756-66345775 None:intergenic 10.0%
!! CTAATATATAAAAATGAATT+TGG - chr4_4:66345754-66345773 Msa0696340:intron 10.0%
!!! TTATAATAAGGATTTAAAAT+TGG - chr4_4:66345932-66345951 Msa0696340:CDS 10.0%
!!! CTGAAATAACTTTTTTATTT+AGG - chr4_4:66342044-66342063 Msa0696340:CDS 15.0%
!! TGCAAATTAAATAATGAAAA+TGG + chr4_4:66342993-66343012 None:intergenic 15.0%
!!! TCATTTTTATATATTAGGAT+TGG + chr4_4:66345751-66345770 None:intergenic 15.0%
!!! ATTGAAAATTGAGATTTTCT+CGG + chr4_4:66341241-66341260 None:intergenic 20.0%
!! TTTCTTATTCTTCTTCTTAT+TGG + chr4_4:66341725-66341744 None:intergenic 20.0%
!!! TTAAAAAGCACAATTTCATA+TGG - chr4_4:66342420-66342439 Msa0696340:CDS 20.0%
!! CTATTAAAAAAATGTCAATC+TGG - chr4_4:66343258-66343277 Msa0696340:intron 20.0%
!! AAATGCATAATAAATCAAGA+AGG + chr4_4:66344346-66344365 None:intergenic 20.0%
!! TAAAGTGATTTCAACTATAA+TGG - chr4_4:66345432-66345451 Msa0696340:CDS 20.0%
!!! TTTGTTCTAGCTTTATAATA+AGG - chr4_4:66345920-66345939 Msa0696340:CDS 20.0%
!! ATTGATAAATCATTTGCAAA+AGG + chr4_4:66347025-66347044 None:intergenic 20.0%
!! TATCATGATTTACACTAATA+AGG - chr4_4:66347044-66347063 Msa0696340:CDS 20.0%
!! ACTACAAGAATAATGTAAAT+TGG + chr4_4:66347295-66347314 None:intergenic 20.0%
!!! ATTCTTGTAGTTTTTTTTTG+AGG - chr4_4:66347304-66347323 Msa0696340:CDS 20.0%
!!! TTCTTGTAGTTTTTTTTTGA+GGG - chr4_4:66347305-66347324 Msa0696340:CDS 20.0%
!!! ACTTATAAATGGATTAATCT+CGG - chr4_4:66347587-66347606 Msa0696340:CDS 20.0%
!! AACATCATACAATACAAATA+AGG + chr4_4:66347620-66347639 None:intergenic 20.0%
!! ATATATTTATTTCAGCTTCA+GGG + chr4_4:66347651-66347670 None:intergenic 20.0%
!! AATATATTTATTTCAGCTTC+AGG + chr4_4:66347652-66347671 None:intergenic 20.0%
!! GAAGCTGAAATAAATATATT+TGG - chr4_4:66347652-66347671 Msa0696340:CDS 20.0%
!! TTGAAAATTGAGATTTTCTC+GGG + chr4_4:66341240-66341259 None:intergenic 25.0%
!! GAGAAAATCTCAATTTTCAA+TGG - chr4_4:66341240-66341259 Msa0696340:three_prime_UTR 25.0%
! ACAATTGGATCTTATAAGAA+TGG - chr4_4:66341660-66341679 Msa0696340:intron 25.0%
! GAAAAAGAAGATGAAGAAAA+AGG - chr4_4:66341741-66341760 Msa0696340:CDS 25.0%
!!! GAATTGCATGATTTTAAAGA+AGG - chr4_4:66341781-66341800 Msa0696340:intron 25.0%
!!! TTGCTGATTTTGATTCTATA+GGG - chr4_4:66342350-66342369 Msa0696340:CDS 25.0%
!! TATGTGCTATGTTATTCTTT+TGG - chr4_4:66342376-66342395 Msa0696340:CDS 25.0%
!! ATGTGCTATGTTATTCTTTT+GGG - chr4_4:66342377-66342396 Msa0696340:CDS 25.0%
! TATGGTAAAAACATAGTTAG+AGG - chr4_4:66342438-66342457 Msa0696340:CDS 25.0%
! TAAAAACATAGTTAGAGGTT+AGG - chr4_4:66342443-66342462 Msa0696340:CDS 25.0%
! TCTCTTAAGAAAATCAAAAG+GGG + chr4_4:66342469-66342488 None:intergenic 25.0%
! CTCTCTTAAGAAAATCAAAA+GGG + chr4_4:66342470-66342489 None:intergenic 25.0%
! TCTCTCTTAAGAAAATCAAA+AGG + chr4_4:66342471-66342490 None:intergenic 25.0%
!! CAAAACTTTTTGACACAAAT+AGG - chr4_4:66342719-66342738 Msa0696340:CDS 25.0%
! AAGTAGCAGTTAAATCAAAT+AGG + chr4_4:66343614-66343633 None:intergenic 25.0%
! ATCATTACAATTTGTATGCT+CGG + chr4_4:66343646-66343665 None:intergenic 25.0%
! ATCATTACAATTTGTCATCT+CGG + chr4_4:66343853-66343872 None:intergenic 25.0%
! AGATGACAAATTGTAATGAT+AGG - chr4_4:66343853-66343872 Msa0696340:CDS 25.0%
!! TTTTTCGCTATCACTAAAAT+TGG + chr4_4:66343967-66343986 None:intergenic 25.0%
! GATTATATCGATCAGTATTA+AGG + chr4_4:66344484-66344503 None:intergenic 25.0%
!!! TGATAGTGTTAACCTTTTTT+GGG + chr4_4:66344840-66344859 None:intergenic 25.0%
!!! ATGATAGTGTTAACCTTTTT+TGG + chr4_4:66344841-66344860 None:intergenic 25.0%
!!! TTAGTTGTTCCTTTTGATTA+TGG - chr4_4:66344925-66344944 Msa0696340:CDS 25.0%
!!! TTGTTAAGCGTGTTTTTTAT+TGG - chr4_4:66344981-66345000 Msa0696340:CDS 25.0%
! AAAATAAAGCCTTAAATGCA+GGG + chr4_4:66345390-66345409 None:intergenic 25.0%
!! ATTTCCTTTGATATTTGCTA+CGG - chr4_4:66345463-66345482 Msa0696340:CDS 25.0%
!!! AGATTGTTTTGTGCAATATA+AGG - chr4_4:66345586-66345605 Msa0696340:CDS 25.0%
! AATGTGTCATAATATTAACC+TGG + chr4_4:66346089-66346108 None:intergenic 25.0%
! TAATATTATGACACATTCTG+CGG - chr4_4:66346092-66346111 Msa0696340:CDS 25.0%
! ACAATTCCAAAAAATTTCCA+CGG + chr4_4:66346652-66346671 None:intergenic 25.0%
! GTGAGTTAATCAAGTTATAT+AGG + chr4_4:66346824-66346843 None:intergenic 25.0%
! GTTGTATATAGAATTTGACA+AGG - chr4_4:66347344-66347363 Msa0696340:CDS 25.0%
! TTCTAAATAGGTGAAGAAAA+TGG - chr4_4:66347385-66347404 Msa0696340:CDS 25.0%
!! TCTCTGTCTGTTTTTCATTT+AGG - chr4_4:66341177-66341196 Msa0696340:three_prime_UTR 30.0%
TGTGAGATTCATTATCTTCA+AGG - chr4_4:66341376-66341395 Msa0696340:three_prime_UTR 30.0%
GTGAGATTCATTATCTTCAA+GGG - chr4_4:66341377-66341396 Msa0696340:three_prime_UTR 30.0%
GGTAGAAAAAGAGTTCAAAA+TGG - chr4_4:66341522-66341541 Msa0696340:CDS 30.0%
! GGATCTTATAAGAATGGTTT+TGG - chr4_4:66341666-66341685 Msa0696340:intron 30.0%
AAAGGTGATTAAAGAAGAAG+TGG - chr4_4:66341759-66341778 Msa0696340:CDS 30.0%
!! ATTTTAAAGAAGGTGAGTTG+AGG - chr4_4:66341791-66341810 Msa0696340:intron 30.0%
AGAATTACCAAATGGAGTAA+TGG - chr4_4:66341816-66341835 Msa0696340:intron 30.0%
!! TTTATTTAGGTTGTGCCTTA+TGG - chr4_4:66342057-66342076 Msa0696340:CDS 30.0%
GCTTTGATTGTATAAGAGAT+CGG - chr4_4:66342184-66342203 Msa0696340:CDS 30.0%
!! TGCTGAATTTGTTACTTTGT+TGG - chr4_4:66342283-66342302 Msa0696340:intron 30.0%
!!! CTTGCTGATTTTGATTCTAT+AGG - chr4_4:66342349-66342368 Msa0696340:CDS 30.0%
! TGTGCTATGTTATTCTTTTG+GGG - chr4_4:66342378-66342397 Msa0696340:CDS 30.0%
! ATTTTCTTAAGAGAGATGCA+TGG - chr4_4:66342475-66342494 Msa0696340:CDS 30.0%
AAGATAATGATTCACTAGCA+AGG + chr4_4:66342566-66342585 None:intergenic 30.0%
AATTCTCAATTCAAGAGCAA+CGG + chr4_4:66342681-66342700 None:intergenic 30.0%
CACTAGAAAAGAAGTTAAGA+AGG - chr4_4:66342750-66342769 Msa0696340:CDS 30.0%
!! TCTACTTTTGCTAGACAAAT+AGG + chr4_4:66342956-66342975 None:intergenic 30.0%
! TTATTCGCTTTAGTAATGGA+AGG + chr4_4:66343020-66343039 None:intergenic 30.0%
TCACTTATTCGCTTTAGTAA+TGG + chr4_4:66343024-66343043 None:intergenic 30.0%
GCAACAGAAGCAAAAATTAA+AGG - chr4_4:66343063-66343082 Msa0696340:intron 30.0%
TTCTGATATTCAAATCAAGC+AGG - chr4_4:66343183-66343202 Msa0696340:intron 30.0%
GTTACAGTGAAAATATTTGC+TGG - chr4_4:66343215-66343234 Msa0696340:intron 30.0%
TGTTGTGAGAAATTATGTCA+AGG - chr4_4:66343381-66343400 Msa0696340:intron 30.0%
TCATTACAATTTGTATGCTC+GGG + chr4_4:66343645-66343664 None:intergenic 30.0%
AAGTAGTAGTTAAATCAAGC+AGG + chr4_4:66343719-66343738 None:intergenic 30.0%
AATTGTAATGACAGCGAAAA+AGG - chr4_4:66343759-66343778 Msa0696340:CDS 30.0%
TCATTACAATTTGTCATCTC+GGG + chr4_4:66343852-66343871 None:intergenic 30.0%
ATCACTAAAATTGGTCATCT+CGG + chr4_4:66343958-66343977 None:intergenic 30.0%
ATCATTACAATTTGTCCTCT+CGG + chr4_4:66344063-66344082 None:intergenic 30.0%
ATCATTACAATTTGTCCTCT+CGG + chr4_4:66344063-66344082 None:intergenic 30.0%
ATATCGATCAGTATTAAGGT+CGG + chr4_4:66344480-66344499 None:intergenic 30.0%
AAAGAAGTTTGACGTATGAT+TGG + chr4_4:66344783-66344802 None:intergenic 30.0%
ACTTCTATTTGACCCAAAAA+AGG - chr4_4:66344825-66344844 Msa0696340:CDS 30.0%
!! TTTTGATTATGGCCATACTA+GGG - chr4_4:66344936-66344955 Msa0696340:CDS 30.0%
! AACATTAGGCAGTATTTTAC+CGG - chr4_4:66345016-66345035 Msa0696340:CDS 30.0%
AAACTGCTCTTTGAATACTT+GGG + chr4_4:66345110-66345129 None:intergenic 30.0%
ATTACTTCAGAAAAATGAGC+TGG + chr4_4:66345133-66345152 None:intergenic 30.0%
CCATACGAAATATAGACATA+TGG + chr4_4:66345253-66345272 None:intergenic 30.0%
CCATATGTCTATATTTCGTA+TGG - chr4_4:66345250-66345269 Msa0696340:CDS 30.0%
AGATGAACAGTAACATAACA+AGG + chr4_4:66345342-66345361 None:intergenic 30.0%
TTAATACTTCCCTGCATTTA+AGG - chr4_4:66345378-66345397 Msa0696340:CDS 30.0%
GAAAATAAAGCCTTAAATGC+AGG + chr4_4:66345391-66345410 None:intergenic 30.0%
GAATCAGAAATAGAACCAAT+AGG + chr4_4:66345799-66345818 None:intergenic 30.0%
! AAGGAAATGACTAGGTTTTT+CGG + chr4_4:66345878-66345897 None:intergenic 30.0%
CAGAACAACTTGCAAAAATA+AGG - chr4_4:66346130-66346149 Msa0696340:CDS 30.0%
ATTATCACATGCTGAAGAAA+CGG - chr4_4:66346239-66346258 Msa0696340:intron 30.0%
CATATACAACAATATTTCCC+AGG - chr4_4:66346371-66346390 Msa0696340:intron 30.0%
TTAATGTATTCTACGAGCTT+TGG + chr4_4:66346561-66346580 None:intergenic 30.0%
!!! ACAATTCCGTGGAAATTTTT+TGG - chr4_4:66346643-66346662 Msa0696340:intron 30.0%
! AAAATGCTCTGATCTAGAAT+TGG + chr4_4:66346711-66346730 None:intergenic 30.0%
! TCAGTCTCATTTTGTGAATA+TGG + chr4_4:66346740-66346759 None:intergenic 30.0%
TATTCACAAAATGAGACTGA+AGG - chr4_4:66346740-66346759 Msa0696340:CDS 30.0%
TTAGAATTCCTTATCTGGTA+CGG + chr4_4:66346925-66346944 None:intergenic 30.0%
! TTTTCCTGCGATTTCTAAAT+AGG - chr4_4:66347373-66347392 Msa0696340:CDS 30.0%
GCATTAGTATACAACAAAGT+GGG + chr4_4:66347542-66347561 None:intergenic 30.0%
AGCATTAGTATACAACAAAG+TGG + chr4_4:66347543-66347562 None:intergenic 30.0%
!! ATCTGGAAGGTACTTATAAA+TGG - chr4_4:66347576-66347595 Msa0696340:CDS 30.0%
TTCTCGGGAAAATTTAGATG+AGG + chr4_4:66341225-66341244 None:intergenic 35.0%
AATGGCGAGAAAATCTTCAT+CGG - chr4_4:66341258-66341277 Msa0696340:three_prime_UTR 35.0%
GCATCGTCAATATAGAGAAA+AGG - chr4_4:66341402-66341421 Msa0696340:three_prime_UTR 35.0%
ACAATGTGGAAGAAACAGTT+AGG - chr4_4:66341500-66341519 Msa0696340:CDS 35.0%
CAATGTGGAAGAAACAGTTA+GGG - chr4_4:66341501-66341520 Msa0696340:CDS 35.0%
GAAGCAATGTGATACACAAT+TGG - chr4_4:66341645-66341664 Msa0696340:intron 35.0%
TTGAGGAGAGAATTACCAAA+TGG - chr4_4:66341808-66341827 Msa0696340:intron 35.0%
GATATCTCCATTACTCCATT+TGG + chr4_4:66341826-66341845 None:intergenic 35.0%
! CCCACATTTTTATAATCACC+CGG + chr4_4:66341862-66341881 None:intergenic 35.0%
CCGGGTGATTATAAAAATGT+GGG - chr4_4:66341859-66341878 Msa0696340:intron 35.0%
CGGGTGATTATAAAAATGTG+GGG - chr4_4:66341860-66341879 Msa0696340:intron 35.0%
ACTCATTGTGATGTGAAAGT+TGG - chr4_4:66341883-66341902 Msa0696340:intron 35.0%
TCAGGTCCAAGAATATTGAT+AGG - chr4_4:66341941-66341960 Msa0696340:intron 35.0%
CAGGTCCAAGAATATTGATA+GGG - chr4_4:66341942-66341961 Msa0696340:intron 35.0%
AGCAACCCTATCAATATTCT+TGG + chr4_4:66341950-66341969 None:intergenic 35.0%
AATATTGATAGGGTTGCTCT+TGG - chr4_4:66341952-66341971 Msa0696340:intron 35.0%
! TTCTTCAAGTTTGGTCCATA+AGG + chr4_4:66342075-66342094 None:intergenic 35.0%
TTATGGACCAAACTTGAAGA+AGG - chr4_4:66342074-66342093 Msa0696340:intron 35.0%
TATGGACCAAACTTGAAGAA+GGG - chr4_4:66342075-66342094 Msa0696340:intron 35.0%
GATTCAAAGAATCACTTCTC+TGG + chr4_4:66342128-66342147 None:intergenic 35.0%
GAATTCTCATCATGCATTGT+AGG - chr4_4:66342305-66342324 Msa0696340:intron 35.0%
GCAGAAATAGTAATACCAGA+TGG - chr4_4:66342604-66342623 Msa0696340:CDS 35.0%
CAAATCATCATTGATCCATC+TGG + chr4_4:66342622-66342641 None:intergenic 35.0%
AAGTAATGGCAGTGAAAGTA+AGG - chr4_4:66342825-66342844 Msa0696340:CDS 35.0%
AAGTAAGGACAGTGAAAGTA+AGG - chr4_4:66342840-66342859 Msa0696340:intron 35.0%
TAGATGTCATGTTGTGTAAC+AGG - chr4_4:66343151-66343170 Msa0696340:intron 35.0%
AGATGTCATGTTGTGTAACA+GGG - chr4_4:66343152-66343171 Msa0696340:intron 35.0%
! CAAATCAAGCAGGTTGAATT+TGG - chr4_4:66343193-66343212 Msa0696340:intron 35.0%
GGTTGTTAACTAATGTTCTC+TGG - chr4_4:66343279-66343298 Msa0696340:intron 35.0%
TCTCACAACATCTTAAGCAT+AGG + chr4_4:66343371-66343390 None:intergenic 35.0%
TTATGTCAAGGAAGAACTTC+TGG - chr4_4:66343393-66343412 Msa0696340:intron 35.0%
TGTCCTTCTGATCCAAAATA+CGG + chr4_4:66343482-66343501 None:intergenic 35.0%
ATCATTACCATTTGTCCTCT+GGG + chr4_4:66343541-66343560 None:intergenic 35.0%
TATCATTACCATTTGTCCTC+TGG + chr4_4:66343542-66343561 None:intergenic 35.0%
TCATTACAATTTGTCCTCTC+AGG + chr4_4:66343750-66343769 None:intergenic 35.0%
TCACTAAAATTGGTCATCTC+GGG + chr4_4:66343957-66343976 None:intergenic 35.0%
TCATTACAATTTGTCCTCTC+GGG + chr4_4:66343750-66343769 None:intergenic 35.0%
AAGTAGCAGTTAAATCAAGC+AGG + chr4_4:66343926-66343945 None:intergenic 35.0%
TCATTACAATTTGTCCTCTC+TGG + chr4_4:66343750-66343769 None:intergenic 35.0%
TCATTACAATTTGTCCTCTC+GGG + chr4_4:66343750-66343769 None:intergenic 35.0%
CTATGACTTTCCTGAAACTT+CGG - chr4_4:66344421-66344440 Msa0696340:CDS 35.0%
! GAACTTTTATCCGAAGTTTC+AGG + chr4_4:66344434-66344453 None:intergenic 35.0%
!!! CTTGTTTTGTCCTACAGTTT+TGG - chr4_4:66344547-66344566 Msa0696340:CDS 35.0%
AACTGAGGTTTGATGTACTT+TGG + chr4_4:66344649-66344668 None:intergenic 35.0%
AAAGTACATCAAACCTCAGT+TGG - chr4_4:66344648-66344667 Msa0696340:CDS 35.0%
TAAGTACAGAACATGAACAG+TGG + chr4_4:66344677-66344696 None:intergenic 35.0%
AGAGTTACTTGAATCCTGTT+TGG - chr4_4:66344733-66344752 Msa0696340:CDS 35.0%
TACTTGAATCCTGTTTGGAT+TGG - chr4_4:66344738-66344757 Msa0696340:CDS 35.0%
CTAGTATGGCCATAATCAAA+AGG + chr4_4:66344937-66344956 None:intergenic 35.0%
!! CTTTTGATTATGGCCATACT+AGG - chr4_4:66344935-66344954 Msa0696340:CDS 35.0%
!!! ACAATAGCATTTTGGTTCGA+TGG + chr4_4:66344965-66344984 None:intergenic 35.0%
! CACGCTTAACAATAGCATTT+TGG + chr4_4:66344973-66344992 None:intergenic 35.0%
!!! TAAGCGTGTTTTTTATTGGC+AGG - chr4_4:66344985-66345004 Msa0696340:CDS 35.0%
! ACATTAGGCAGTATTTTACC+GGG - chr4_4:66345017-66345036 Msa0696340:CDS 35.0%
GAAACTGCTCTTTGAATACT+TGG + chr4_4:66345111-66345130 None:intergenic 35.0%
GGATTCATGTATTCTTGAAC+TGG + chr4_4:66345166-66345185 None:intergenic 35.0%
CCACATTAAGTTATCACGAT+AGG + chr4_4:66345514-66345533 None:intergenic 35.0%
CCTATCGTGATAACTTAATG+TGG - chr4_4:66345511-66345530 Msa0696340:CDS 35.0%
TGAAAGAATAAGCATCCTCA+TGG - chr4_4:66345545-66345564 Msa0696340:CDS 35.0%
ACAATTGTAAGCGTATGAGA+CGG + chr4_4:66345691-66345710 None:intergenic 35.0%
ATTGCACAAAGGAAATGACT+AGG + chr4_4:66345886-66345905 None:intergenic 35.0%
AATGATCACGAATTGCACAA+AGG + chr4_4:66345897-66345916 None:intergenic 35.0%
! GCACTGATATATGAGAGTTA+AGG + chr4_4:66346003-66346022 None:intergenic 35.0%
! TATTTTGTGTCTGTGATTCC+AGG - chr4_4:66346068-66346087 Msa0696340:intron 35.0%
ACAAAAAGGTTTACCGAGTA+TGG - chr4_4:66346263-66346282 Msa0696340:intron 35.0%
CAAAAAGGTTTACCGAGTAT+GGG - chr4_4:66346264-66346283 Msa0696340:intron 35.0%
AAAAAGGTTTACCGAGTATG+GGG - chr4_4:66346265-66346284 Msa0696340:intron 35.0%
! AAGAAGGAATCGAGTTTTTC+AGG - chr4_4:66346289-66346308 Msa0696340:intron 35.0%
TACAACAATATTTCCCAGGA+CGG - chr4_4:66346375-66346394 Msa0696340:intron 35.0%
ATAACAGTTAGAGCTTTCAG+CGG + chr4_4:66346478-66346497 None:intergenic 35.0%
AAAAAGTTCACTGAGCATTC+AGG - chr4_4:66346501-66346520 Msa0696340:intron 35.0%
TTCAATGTTAGACAATTCCG+TGG - chr4_4:66346632-66346651 Msa0696340:intron 35.0%
! GATATTTTCTTGTCTGCAGA+TGG - chr4_4:66346680-66346699 Msa0696340:intron 35.0%
CAATCTCTGGTAATAATGAC+AGG + chr4_4:66346846-66346865 None:intergenic 35.0%
TATTACCAGAGATTGAACCA+TGG - chr4_4:66346851-66346870 Msa0696340:CDS 35.0%
GTACCAGATAAGGAATTCTA+AGG - chr4_4:66346924-66346943 Msa0696340:intron 35.0%
AGACCTTAGAATTCCTTATC+TGG + chr4_4:66346930-66346949 None:intergenic 35.0%
! ACTTTTGCTTTATGGTCTTC+AGG + chr4_4:66347234-66347253 None:intergenic 35.0%
!! GCTTGTCTACTTTTGCTTTA+TGG + chr4_4:66347242-66347261 None:intergenic 35.0%
TTCACCTATTTAGAAATCGC+AGG + chr4_4:66347380-66347399 None:intergenic 35.0%
! ATCATGTTTTGCATGTAAGC+TGG + chr4_4:66347448-66347467 None:intergenic 35.0%
CATAAAGACTTCAGTCTTAG+AGG + chr4_4:66347497-66347516 None:intergenic 35.0%
ATACAACAAAGTGGGAGATA+AGG + chr4_4:66347534-66347553 None:intergenic 35.0%
TGCTCAAACTCATTAAGATC+TGG - chr4_4:66347559-66347578 Msa0696340:CDS 35.0%
CAAACTCATTAAGATCTGGA+AGG - chr4_4:66347563-66347582 Msa0696340:CDS 35.0%
ATTTATTTCAGCTTCAGGGA+AGG + chr4_4:66347647-66347666 None:intergenic 35.0%
! TCAGAGAAAGCGTAAGAACA+AGG - chr4_4:66341444-66341463 Msa0696340:three_prime_UTR 40.0%
CAGGAAGAAGAAACTGTTGT+TGG - chr4_4:66341472-66341491 Msa0696340:CDS 40.0%
!! TGTTGTTGGTGTTGACAATG+TGG - chr4_4:66341486-66341505 Msa0696340:CDS 40.0%
TCGTTAACAGATTCACCTTC+TGG - chr4_4:66341595-66341614 Msa0696340:intron 40.0%
GCCGGGTGATTATAAAAATG+TGG - chr4_4:66341858-66341877 Msa0696340:intron 40.0%
TTCTTGGACCTGAAGTAATG+CGG + chr4_4:66341934-66341953 None:intergenic 40.0%
ATGGACCAAACTTGAAGAAG+GGG - chr4_4:66342076-66342095 Msa0696340:intron 40.0%
! ATGTTCCCCTTCTTCAAGTT+TGG + chr4_4:66342084-66342103 None:intergenic 40.0%
TGAAGAAGGGGAACATTAAG+AGG - chr4_4:66342088-66342107 Msa0696340:intron 40.0%
CAAAGCAGAAAAACTCCTTG+TGG + chr4_4:66342170-66342189 None:intergenic 40.0%
TGCTTGGCAAGTGAAAGTAA+TGG - chr4_4:66342811-66342830 Msa0696340:CDS 40.0%
AAACAACAGGGCAAAAACTG+AGG + chr4_4:66342929-66342948 None:intergenic 40.0%
!!! AGTTTTTGCCCTGTTGTTTC+AGG - chr4_4:66342930-66342949 Msa0696340:intron 40.0%
CAAATAGGCCTGAAACAACA+GGG + chr4_4:66342941-66342960 None:intergenic 40.0%
ACAAATAGGCCTGAAACAAC+AGG + chr4_4:66342942-66342961 None:intergenic 40.0%
GTAACGAACAAAAGCTGCTT+CGG + chr4_4:66343121-66343140 None:intergenic 40.0%
CTTCTATGAAGATCCAAGAC+AGG + chr4_4:66343327-66343346 None:intergenic 40.0%
! GATCAGAAGGACATTTGTTG+TGG - chr4_4:66343489-66343508 Msa0696340:intron 40.0%
TCATTACCATTTGTCCTCTG+GGG + chr4_4:66343540-66343559 None:intergenic 40.0%
!! AAAAGTATCATGCCCTCCTA+TGG - chr4_4:66343671-66343690 Msa0696340:CDS 40.0%
!! AAAAGTATCATGCCCTCCTA+CGG - chr4_4:66343671-66343690 Msa0696340:CDS 40.0%
!! AAAAGTATCATGCCCTCCTA+CGG - chr4_4:66343671-66343690 Msa0696340:CDS 40.0%
!! AAAAGTATCATGCCCTCCTA+CGG - chr4_4:66343671-66343690 Msa0696340:CDS 40.0%
!! AAAAGTATCATGCCCTCCTA+CGG - chr4_4:66343671-66343690 Msa0696340:CDS 40.0%
!! AAAAGTATCATGCCCTCCTA+CGG - chr4_4:66343671-66343690 Msa0696340:CDS 40.0%
ATCTCTCTGAGTAAAGTCGA+GGG + chr4_4:66344371-66344390 None:intergenic 40.0%
TTGAGCACTTTCAGAAACAC+TGG - chr4_4:66344588-66344607 Msa0696340:CDS 40.0%
TGAGCACTTTCAGAAACACT+GGG - chr4_4:66344589-66344608 Msa0696340:CDS 40.0%
TTTCAGAAACACTGGGGAAA+AGG - chr4_4:66344596-66344615 Msa0696340:CDS 40.0%
!! ATGTACTTTGGAGCACATCT+TGG + chr4_4:66344637-66344656 None:intergenic 40.0%
GGCAGGTGGAAATAAACATT+AGG - chr4_4:66345002-66345021 Msa0696340:CDS 40.0%
CATGAGATGCTGAAACTGAA+GGG - chr4_4:66345073-66345092 Msa0696340:CDS 40.0%
GAATACATGAATCCTGTGTC+TGG - chr4_4:66345172-66345191 Msa0696340:CDS 40.0%
AAATTCAGAAGACCAGACAC+AGG + chr4_4:66345187-66345206 None:intergenic 40.0%
TTAGCTGCAAATTTGCCAGA+CGG - chr4_4:66345205-66345224 Msa0696340:CDS 40.0%
TATGGCCCAATGTCATGTTT+CGG + chr4_4:66345235-66345254 None:intergenic 40.0%
CTGTTGTGACTCATATGATG+TGG - chr4_4:66345309-66345328 Msa0696340:CDS 40.0%
CTCACCGTAGCAAATATCAA+AGG + chr4_4:66345470-66345489 None:intergenic 40.0%
AGACAAGCAAATACTCCATG+AGG + chr4_4:66345563-66345582 None:intergenic 40.0%
AATTGTAAGCGTATGAGACG+GGG + chr4_4:66345689-66345708 None:intergenic 40.0%
CAATTGTAAGCGTATGAGAC+GGG + chr4_4:66345690-66345709 None:intergenic 40.0%
CAAGTTGTTCTGTAGAGAGA+GGG + chr4_4:66346122-66346141 None:intergenic 40.0%
GCTGAAGAAACGGTACAAAA+AGG - chr4_4:66346249-66346268 Msa0696340:intron 40.0%
ATTCCTTCTTTCCCCATACT+CGG + chr4_4:66346279-66346298 None:intergenic 40.0%
!!! AGCTATTTTAGCTCCAGTTG+AGG + chr4_4:66346340-66346359 None:intergenic 40.0%
ATTCTGAACCCTCTCTTCAT+GGG - chr4_4:66346418-66346437 Msa0696340:intron 40.0%
ACTTCTAGGTGACAAATTGG+TGG + chr4_4:66346454-66346473 None:intergenic 40.0%
TAACAGTTAGAGCTTTCAGC+GGG + chr4_4:66346477-66346496 None:intergenic 40.0%
TACTCATGACTCTCACAAGA+AGG - chr4_4:66346605-66346624 Msa0696340:intron 40.0%
TCACAAAATGAGACTGAAGG+AGG - chr4_4:66346743-66346762 Msa0696340:CDS 40.0%
AAAGTCCATGGTTCAATCTC+TGG + chr4_4:66346859-66346878 None:intergenic 40.0%
! TACACTCGGCAACATTTTCA+GGG + chr4_4:66347182-66347201 None:intergenic 40.0%
! ATACACTCGGCAACATTTTC+AGG + chr4_4:66347183-66347202 None:intergenic 40.0%
GTCAATCAACTGGATACACT+CGG + chr4_4:66347196-66347215 None:intergenic 40.0%
AGCAAAAGTAGACAAGCTTG+AGG - chr4_4:66347245-66347264 Msa0696340:CDS 40.0%
AAGTGGGAGATAAGGTAAGA+AGG + chr4_4:66347526-66347545 None:intergenic 40.0%
!! CTCTGAAGCTTCAAAGACTC+TGG + chr4_4:66341430-66341449 None:intergenic 45.0%
GCGTAAGAACAAGGAAGAAC+AGG - chr4_4:66341453-66341472 Msa0696340:exon 45.0%
TTCAATGTCTTCTTCCTCGC+AGG + chr4_4:66341628-66341647 None:intergenic 45.0%
TGGAGAGAGAAGTTGAGAAG+AGG - chr4_4:66341686-66341705 Msa0696340:CDS 45.0%
TGCAAGTCCGTTGACAAACT+GGG + chr4_4:66342780-66342799 None:intergenic 45.0%
! TCAACGGACTTGCACTTGTA+AGG - chr4_4:66342786-66342805 Msa0696340:CDS 45.0%
TTGCACTTGTAAGGTCTGCT+TGG - chr4_4:66342795-66342814 Msa0696340:CDS 45.0%
AGGACAGTGAAAGTAAGGTC+TGG - chr4_4:66342845-66342864 Msa0696340:intron 45.0%
CTGTTGCTAGCTCAGTTTCT+CGG + chr4_4:66343050-66343069 None:intergenic 45.0%
TCACTGCAAAACACCTGTCT+TGG - chr4_4:66343311-66343330 Msa0696340:intron 45.0%
!! GCACCGTATTTTGGATCAGA+AGG - chr4_4:66343476-66343495 Msa0696340:intron 45.0%
CTACTTCAACATTGCCTGAG+AGG - chr4_4:66343733-66343752 Msa0696340:CDS 45.0%
AAAAGGATCATGCCCTCCTA+CGG - chr4_4:66343776-66343795 Msa0696340:CDS 45.0%
! GAGCTTGGTGAATCTAGTAC+AGG - chr4_4:66344005-66344024 Msa0696340:intron 45.0%
CTACTTCAACATTGCCAGAG+AGG - chr4_4:66344150-66344169 Msa0696340:intron 45.0%
CATCTCTCTGAGTAAAGTCG+AGG + chr4_4:66344372-66344391 None:intergenic 45.0%
CTCGACTTTACTCAGAGAGA+TGG - chr4_4:66344370-66344389 Msa0696340:CDS 45.0%
CCACTGATGTCCAAAACTGT+AGG + chr4_4:66344560-66344579 None:intergenic 45.0%
!!! CCTACAGTTTTGGACATCAG+TGG - chr4_4:66344557-66344576 Msa0696340:CDS 45.0%
GAGCACTTTCAGAAACACTG+GGG - chr4_4:66344590-66344609 Msa0696340:CDS 45.0%
AGCACATCTTGGACCACTAT+AGG + chr4_4:66344626-66344645 None:intergenic 45.0%
! TGAACAGTGGATTCCAACTG+AGG + chr4_4:66344664-66344683 None:intergenic 45.0%
!! ATCCTGTTTGGATTGGTGTG+AGG - chr4_4:66344745-66344764 Msa0696340:CDS 45.0%
AACCTCACACCAATCCAAAC+AGG + chr4_4:66344750-66344769 None:intergenic 45.0%
!!! GCGTGTTTTTTATTGGCAGG+TGG - chr4_4:66344988-66345007 Msa0696340:CDS 45.0%
TCATGCCAAGTGTTTCTCTG+AGG + chr4_4:66345058-66345077 None:intergenic 45.0%
GCATGAGATGCTGAAACTGA+AGG - chr4_4:66345072-66345091 Msa0696340:CDS 45.0%
AGATGCTGAAACTGAAGGGA+TGG - chr4_4:66345077-66345096 Msa0696340:CDS 45.0%
TAGCTGCAAATTTGCCAGAC+GGG - chr4_4:66345206-66345225 Msa0696340:CDS 45.0%
GGAGTCCGAAACATGACATT+GGG - chr4_4:66345227-66345246 Msa0696340:CDS 45.0%
! TGTAACCAAGCATCGCCTAT+TGG - chr4_4:66345781-66345800 Msa0696340:intron 45.0%
TAGAACCAATAGGCGATGCT+TGG + chr4_4:66345789-66345808 None:intergenic 45.0%
TGACCCACACATCGAATTAC+AGG - chr4_4:66345965-66345984 Msa0696340:CDS 45.0%
CCACCTGTAATTCGATGTGT+GGG + chr4_4:66345971-66345990 None:intergenic 45.0%
GCAAGTTGTTCTGTAGAGAG+AGG + chr4_4:66346123-66346142 None:intergenic 45.0%
GCACAAAGCTCTGTGTCAAA+TGG - chr4_4:66346167-66346186 Msa0696340:CDS 45.0%
TTACCTGAACGGGAAGTGAA+AGG - chr4_4:66346210-66346229 Msa0696340:intron 45.0%
TACCTGAACGGGAAGTGAAA+GGG - chr4_4:66346211-66346230 Msa0696340:intron 45.0%
TTACCGAGTATGGGGAAAGA+AGG - chr4_4:66346273-66346292 Msa0696340:intron 45.0%
ACATCTTGCATCTCCTCAAC+TGG - chr4_4:66346324-66346343 Msa0696340:intron 45.0%
ATATTTCCCAGGACGGAGAA+CGG - chr4_4:66346382-66346401 Msa0696340:intron 45.0%
GATTCTGAACCCTCTCTTCA+TGG - chr4_4:66346417-66346436 Msa0696340:intron 45.0%
! CTAGGTGACAAATTGGTGGT+AGG + chr4_4:66346450-66346469 None:intergenic 45.0%
GGGACTTCTAGGTGACAAAT+TGG + chr4_4:66346457-66346476 None:intergenic 45.0%
TCTTCGAAAGACATCCCACT+GGG + chr4_4:66346529-66346548 None:intergenic 45.0%
ACATGTTGCTGGAAAGTCCA+TGG + chr4_4:66346871-66346890 None:intergenic 45.0%
TGGACTTTCCAGCAACATGT+TGG - chr4_4:66346871-66346890 Msa0696340:intron 45.0%
ACACAAACTCCAATACCGCA+TGG + chr4_4:66347158-66347177 None:intergenic 45.0%
! ACACTCGGCAACATTTTCAG+GGG + chr4_4:66347181-66347200 None:intergenic 45.0%
GTGTATCCAGTTGATTGACG+AGG - chr4_4:66347197-66347216 Msa0696340:CDS 45.0%
AGTTGATTGACGAGGTCAGA+CGG - chr4_4:66347205-66347224 Msa0696340:CDS 45.0%
! GCATGCATGTTTAGTTTCGC+TGG + chr4_4:66347475-66347494 None:intergenic 45.0%
AAAATCTTCATCGGCGACCG+AGG - chr4_4:66341267-66341286 Msa0696340:three_prime_UTR 50.0%
CTGTAACGCCGCATTACTTC+AGG - chr4_4:66341923-66341942 Msa0696340:intron 50.0%
GGTTGCTCTTGGAAAGTTGC+AGG - chr4_4:66341963-66341982 Msa0696340:intron 50.0%
TGCTCTTGGAAAGTTGCAGG+TGG - chr4_4:66341966-66341985 Msa0696340:intron 50.0%
GTGCAAGTCCGTTGACAAAC+TGG + chr4_4:66342781-66342800 None:intergenic 50.0%
!! CGACAGTGAGCACCGTATTT+TGG - chr4_4:66343467-66343486 Msa0696340:intron 50.0%
CAACTTCAACATTGCCCCAG+AGG - chr4_4:66343523-66343542 Msa0696340:intron 50.0%
ACATTGCCCCAGAGGACAAA+TGG - chr4_4:66343531-66343550 Msa0696340:intron 50.0%
CAAAGCTTCATGCCGTCCTA+CGG - chr4_4:66343566-66343585 Msa0696340:intron 50.0%
ATCCACCAAGCTCCATAGGA+GGG + chr4_4:66343686-66343705 None:intergenic 50.0%
! GAGCTTGATGGACGAGATAC+AGG - chr4_4:66343900-66343919 Msa0696340:CDS 50.0%
ATTCACCAAGCTCCGTAGGA+GGG + chr4_4:66343998-66344017 None:intergenic 50.0%
CTAGATTCACCAAGCTCCGT+AGG + chr4_4:66344002-66344021 None:intergenic 50.0%
CTACTTCAACATTGCCCGAG+AGG - chr4_4:66343628-66343647 Msa0696340:CDS 50.0%
TTGCAGAAAGCAGCTGAGAG+AGG - chr4_4:66344506-66344525 Msa0696340:CDS 50.0%
CATCTTGGACCACTATAGGC+TGG + chr4_4:66344622-66344641 None:intergenic 50.0%
GTTCGATGGCAACCCTAGTA+TGG + chr4_4:66344951-66344970 None:intergenic 50.0%
AGGACGACATTTGAGAGACC+CGG + chr4_4:66345038-66345057 None:intergenic 50.0%
GTCGTCCTCAGAGAAACACT+TGG - chr4_4:66345050-66345069 Msa0696340:CDS 50.0%
GGGAGTCCGAAACATGACAT+TGG - chr4_4:66345226-66345245 Msa0696340:CDS 50.0%
CCCACACATCGAATTACAGG+TGG - chr4_4:66345968-66345987 Msa0696340:intron 50.0%
GCCACCTGTAATTCGATGTG+TGG + chr4_4:66345972-66345991 None:intergenic 50.0%
CCACTGAGCTGTTACCTGAA+CGG - chr4_4:66346199-66346218 Msa0696340:intron 50.0%
CACTGAGCTGTTACCTGAAC+GGG - chr4_4:66346200-66346219 Msa0696340:intron 50.0%
ATCCCTTTCACTTCCCGTTC+AGG + chr4_4:66346216-66346235 None:intergenic 50.0%
TGAACGGGAAGTGAAAGGGA+TGG - chr4_4:66346215-66346234 Msa0696340:intron 50.0%
GATATTCCGTTCTCCGTCCT+GGG + chr4_4:66346391-66346410 None:intergenic 50.0%
GGAACAGTCCCATGAAGAGA+GGG + chr4_4:66346429-66346448 None:intergenic 50.0%
AGGAACAGTCCCATGAAGAG+AGG + chr4_4:66346430-66346449 None:intergenic 50.0%
GTCTTCGAAAGACATCCCAC+TGG + chr4_4:66346530-66346549 None:intergenic 50.0%
CAGCTTCTCCAACATGTTGC+TGG + chr4_4:66346882-66346901 None:intergenic 50.0%
GAAGCTGTCATCATTCCTGC+TGG - chr4_4:66346895-66346914 Msa0696340:intron 50.0%
CTGGTTGTCCGTACCAGATA+AGG - chr4_4:66346914-66346933 Msa0696340:intron 50.0%
TCTGCAGTGTTGTGTCCATG+CGG - chr4_4:66347140-66347159 Msa0696340:CDS 50.0%
GTGTTGTGTCCATGCGGTAT+TGG - chr4_4:66347146-66347165 Msa0696340:CDS 50.0%
GTCTGACCTCGTCAATCAAC+TGG + chr4_4:66347206-66347225 None:intergenic 50.0%
GAAGAACCGACGGGAAGCAA+TGG - chr4_4:66341317-66341336 Msa0696340:three_prime_UTR 55.0%
CTCGCAGGAACAGAACCAGA+AGG + chr4_4:66341613-66341632 None:intergenic 55.0%
!! CTTCTGGTTCTGTTCCTGCG+AGG - chr4_4:66341611-66341630 Msa0696340:intron 55.0%
GATATCACCTGCTTCGACGC+CGG - chr4_4:66341840-66341859 Msa0696340:intron 55.0%
ATATCACCTGCTTCGACGCC+GGG - chr4_4:66341841-66341860 Msa0696340:intron 55.0%
AGGCGTGCCCAGTTTGTCAA+CGG - chr4_4:66342770-66342789 Msa0696340:CDS 55.0%
ATCCACCAACCTCCGTAGGA+CGG + chr4_4:66343581-66343600 None:intergenic 55.0%
TCACATCCACCAACCTCCGT+AGG + chr4_4:66343585-66343604 None:intergenic 55.0%
!! GAGGTTGGTGGATGTGACAC+AGG - chr4_4:66343588-66343607 Msa0696340:intron 55.0%
TCATGCCCTCCTATGGAGCT+TGG - chr4_4:66343678-66343697 Msa0696340:CDS 55.0%
CATCCACCAAGCTCCATAGG+AGG + chr4_4:66343687-66343706 None:intergenic 55.0%
CCACATCCACCAAGCTCCAT+AGG + chr4_4:66343690-66343709 None:intergenic 55.0%
! CCTATGGAGCTTGGTGGATG+TGG - chr4_4:66343687-66343706 Msa0696340:CDS 55.0%
! GAGCTTGGTGGATGTGGTAC+AGG - chr4_4:66343693-66343712 Msa0696340:CDS 55.0%
! GAGCTTGGTGGACGAGATAC+AGG - chr4_4:66343798-66343817 Msa0696340:CDS 55.0%
GTCCATCAAGCTCCGTAGGA+GGG + chr4_4:66343893-66343912 None:intergenic 55.0%
TCTCGTCCATCAAGCTCCGT+AGG + chr4_4:66343897-66343916 None:intergenic 55.0%
GATTCACCAAGCTCCGTAGG+AGG + chr4_4:66343999-66344018 None:intergenic 55.0%
ATCCACCAAGCTCCGTAGGA+GGG + chr4_4:66344313-66344332 None:intergenic 55.0%
! GAGCTTGGTGGATGTGGTAC+AGG - chr4_4:66343693-66343712 Msa0696340:CDS 55.0%
GGGAAAAGGCCAGCCTATAG+TGG - chr4_4:66344610-66344629 Msa0696340:CDS 55.0%
TCATGTTTCGGACTCCCGTC+TGG + chr4_4:66345223-66345242 None:intergenic 55.0%
GATGTGTGGGTCACTGACAC+AGG + chr4_4:66345958-66345977 None:intergenic 55.0%
CCGTTCAGGTAACAGCTCAG+TGG + chr4_4:66346202-66346221 None:intergenic 55.0%
CGATATTCCGTTCTCCGTCC+TGG + chr4_4:66346392-66346411 None:intergenic 55.0%
GAGCTTTCAGCGGGACTTCT+AGG + chr4_4:66346468-66346487 None:intergenic 55.0%
TGAGCATTCAGGTGCCCAGT+GGG - chr4_4:66346512-66346531 Msa0696340:intron 55.0%
ATCTGGTACGGACAACCAGC+AGG + chr4_4:66346913-66346932 None:intergenic 55.0%
TTCGTCCGGTAGAGGCTCCT+CGG + chr4_4:66341287-66341306 None:intergenic 60.0%
AGCCTCTACCGGACGAACTC+CGG - chr4_4:66341290-66341309 Msa0696340:three_prime_UTR 60.0%
GAACCGACGGGAAGCAATGG+CGG - chr4_4:66341320-66341339 Msa0696340:three_prime_UTR 60.0%
GGAAGCAATGGCGGTGCAAG+AGG - chr4_4:66341329-66341348 Msa0696340:three_prime_UTR 60.0%
GCGGTGCAAGAGGAGAGTGA+TGG - chr4_4:66341339-66341358 Msa0696340:three_prime_UTR 60.0%
! TAATCACCCGGCGTCGAAGC+AGG + chr4_4:66341850-66341869 None:intergenic 60.0%
CCTTGTGGCAGCTCGAACAC+TGG + chr4_4:66342155-66342174 None:intergenic 60.0%
CCAGTGTTCGAGCTGCCACA+AGG - chr4_4:66342152-66342171 Msa0696340:intron 60.0%
AGCTTCATGCCGTCCTACGG+AGG - chr4_4:66343569-66343588 Msa0696340:intron 60.0%
TCATGCCGTCCTACGGAGGT+TGG - chr4_4:66343573-66343592 Msa0696340:intron 60.0%
TGCCCTCCTATGGAGCTTGG+TGG - chr4_4:66343681-66343700 Msa0696340:CDS 60.0%
TCATGCCCTCCTACGGAGCT+TGG - chr4_4:66343783-66343802 Msa0696340:CDS 60.0%
GTCCACCAAGCTCCGTAGGA+GGG + chr4_4:66343791-66343810 None:intergenic 60.0%
TCTCGTCCACCAAGCTCCGT+AGG + chr4_4:66343795-66343814 None:intergenic 60.0%
TGCCCTCCTACGGAGCTTGA+TGG - chr4_4:66343888-66343907 Msa0696340:CDS 60.0%
CGTCCATCAAGCTCCGTAGG+AGG + chr4_4:66343894-66343913 None:intergenic 60.0%
TCATGCCCTCCTACGGAGCT+TGG - chr4_4:66343783-66343802 Msa0696340:CDS 60.0%
TCATGCCCTCCTACGGAGCT+TGG - chr4_4:66343783-66343802 Msa0696340:CDS 60.0%
GTCCACCAAGCTCCGTAGGA+GGG + chr4_4:66343791-66343810 None:intergenic 60.0%
! CTCCTACGGAGCTTGGTGGA+CGG - chr4_4:66343790-66343809 Msa0696340:CDS 60.0%
! TCCTACGGAGCTTGGTGGAC+GGG - chr4_4:66343791-66343810 Msa0696340:CDS 60.0%
TCATGCCCTCCTACGGAGCT+TGG - chr4_4:66343783-66343802 Msa0696340:CDS 60.0%
GTCCACCAAGCTCCGTAGGA+GGG + chr4_4:66343791-66343810 None:intergenic 60.0%
TCTCGTCCACCAAGCTCCGT+AGG + chr4_4:66343795-66343814 None:intergenic 60.0%
CTACTTCAACGTCGCCCGAG+AGG - chr4_4:66344255-66344274 Msa0696340:CDS 60.0%
TCATGCCCTCCTACGGAGCT+TGG - chr4_4:66343783-66343802 Msa0696340:CDS 60.0%
CATCCACCAAGCTCCGTAGG+AGG + chr4_4:66344314-66344333 None:intergenic 60.0%
CCACATCCACCAAGCTCCGT+AGG + chr4_4:66344317-66344336 None:intergenic 60.0%
! CCTACGGAGCTTGGTGGATG+TGG - chr4_4:66344314-66344333 Msa0696340:CDS 60.0%
CTGAGCATTCAGGTGCCCAG+TGG - chr4_4:66346511-66346530 Msa0696340:intron 60.0%
CACCGGAGTTCGTCCGGTAG+AGG + chr4_4:66341295-66341314 None:intergenic 65.0%
CTACCGGACGAACTCCGGTG+CGG - chr4_4:66341295-66341314 Msa0696340:three_prime_UTR 65.0%
CTTCCGCACCGGAGTTCGTC+CGG + chr4_4:66341301-66341320 None:intergenic 65.0%
CTCCGGTGCGGAAGAACCGA+CGG - chr4_4:66341307-66341326 Msa0696340:three_prime_UTR 65.0%
TCCGGTGCGGAAGAACCGAC+GGG - chr4_4:66341308-66341327 Msa0696340:three_prime_UTR 65.0%
!! TCCCGTCGGTTCTTCCGCAC+CGG + chr4_4:66341312-66341331 None:intergenic 65.0%
GCACCGCCATTGCTTCCCGT+CGG + chr4_4:66341326-66341345 None:intergenic 65.0%
TGCCGTCCTACGGAGGTTGG+TGG - chr4_4:66343576-66343595 Msa0696340:intron 65.0%
TGCCCTCCTACGGAGCTTGG+TGG - chr4_4:66343786-66343805 Msa0696340:CDS 65.0%
CGTCCACCAAGCTCCGTAGG+AGG + chr4_4:66343792-66343811 None:intergenic 65.0%
TGCCCTCCTACGGAGCTTGG+TGG - chr4_4:66343786-66343805 Msa0696340:CDS 65.0%
CGTCCACCAAGCTCCGTAGG+AGG + chr4_4:66343792-66343811 None:intergenic 65.0%
TCCCGTCCACCAAGCTCCGT+AGG + chr4_4:66344107-66344126 None:intergenic 65.0%
TGCCCTCCTACGGAGCTTGG+TGG - chr4_4:66343786-66343805 Msa0696340:CDS 65.0%
CGTCCACCAAGCTCCGTAGG+AGG + chr4_4:66343792-66343811 None:intergenic 65.0%
TGCCCTCCTACGGAGCTTGG+TGG - chr4_4:66343786-66343805 Msa0696340:CDS 65.0%
GGCGACCGAGGAGCCTCTAC+CGG - chr4_4:66341279-66341298 Msa0696340:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 66341157 66347780 66341157 ID=Msa0696340;Name=Msa0696340
chr4_4 mRNA 66341157 66347780 66341157 ID=Msa0696340-mRNA-1;Parent=Msa0696340;Name=Msa0696340-mRNA-1;_AED=0.10;_eAED=0.10;_QI=102|1|0.91|1|1|1|12|314|1284
chr4_4 exon 66341157 66341542 66341157 ID=Msa0696340-mRNA-1:exon:19267;Parent=Msa0696340-mRNA-1
chr4_4 exon 66341671 66341790 66341671 ID=Msa0696340-mRNA-1:exon:19266;Parent=Msa0696340-mRNA-1
chr4_4 exon 66341992 66342077 66341992 ID=Msa0696340-mRNA-1:exon:19265;Parent=Msa0696340-mRNA-1
chr4_4 exon 66342166 66342238 66342166 ID=Msa0696340-mRNA-1:exon:19264;Parent=Msa0696340-mRNA-1
chr4_4 exon 66342311 66342847 66342311 ID=Msa0696340-mRNA-1:exon:19263;Parent=Msa0696340-mRNA-1
chr4_4 exon 66343607 66343930 66343607 ID=Msa0696340-mRNA-1:exon:19262;Parent=Msa0696340-mRNA-1
chr4_4 exon 66344171 66345629 66344171 ID=Msa0696340-mRNA-1:exon:19261;Parent=Msa0696340-mRNA-1
chr4_4 exon 66345701 66345764 66345701 ID=Msa0696340-mRNA-1:exon:19260;Parent=Msa0696340-mRNA-1
chr4_4 exon 66345853 66345985 66345853 ID=Msa0696340-mRNA-1:exon:19259;Parent=Msa0696340-mRNA-1
chr4_4 exon 66346076 66346196 66346076 ID=Msa0696340-mRNA-1:exon:19258;Parent=Msa0696340-mRNA-1
chr4_4 exon 66346732 66346871 66346732 ID=Msa0696340-mRNA-1:exon:19257;Parent=Msa0696340-mRNA-1
chr4_4 exon 66346953 66347780 66346953 ID=Msa0696340-mRNA-1:exon:19256;Parent=Msa0696340-mRNA-1
chr4_4 five_prime_UTR 66347679 66347780 66347679 ID=Msa0696340-mRNA-1:five_prime_utr;Parent=Msa0696340-mRNA-1
chr4_4 CDS 66346953 66347678 66346953 ID=Msa0696340-mRNA-1:cds;Parent=Msa0696340-mRNA-1
chr4_4 CDS 66346732 66346871 66346732 ID=Msa0696340-mRNA-1:cds;Parent=Msa0696340-mRNA-1
chr4_4 CDS 66346076 66346196 66346076 ID=Msa0696340-mRNA-1:cds;Parent=Msa0696340-mRNA-1
chr4_4 CDS 66345853 66345985 66345853 ID=Msa0696340-mRNA-1:cds;Parent=Msa0696340-mRNA-1
chr4_4 CDS 66345701 66345764 66345701 ID=Msa0696340-mRNA-1:cds;Parent=Msa0696340-mRNA-1
chr4_4 CDS 66344171 66345629 66344171 ID=Msa0696340-mRNA-1:cds;Parent=Msa0696340-mRNA-1
chr4_4 CDS 66343607 66343930 66343607 ID=Msa0696340-mRNA-1:cds;Parent=Msa0696340-mRNA-1
chr4_4 CDS 66342311 66342847 66342311 ID=Msa0696340-mRNA-1:cds;Parent=Msa0696340-mRNA-1
chr4_4 CDS 66342166 66342238 66342166 ID=Msa0696340-mRNA-1:cds;Parent=Msa0696340-mRNA-1
chr4_4 CDS 66341992 66342077 66341992 ID=Msa0696340-mRNA-1:cds;Parent=Msa0696340-mRNA-1
chr4_4 CDS 66341671 66341790 66341671 ID=Msa0696340-mRNA-1:cds;Parent=Msa0696340-mRNA-1
chr4_4 CDS 66341471 66341542 66341471 ID=Msa0696340-mRNA-1:cds;Parent=Msa0696340-mRNA-1
chr4_4 three_prime_UTR 66341157 66341470 66341157 ID=Msa0696340-mRNA-1:three_prime_utr;Parent=Msa0696340-mRNA-1
Gene Sequence

>Msa0696340

ATGGCGAGAAAATCTTCATCGGCGACCGAGGAGCCTCTACCGGACGAACTCCGGTGCGGAAGAACCGACGGGAAGCAATGGCGGTGCAAGAGGAGAGTGATGGATAATCTGAAACTGTGTGAGATTCATTATCTTCAAGGGAAGCATCGTCAATATAGAGAAAAGGTACCAGAGTCTTTGAAGCTTCAGAGAAAGCGTAAGAACAAGGAAGAACAGGAAGAAGAAACTGTTGTTGGTGTTGACAATGTGGAAGAAACAGTTAGGGTAGAAAAAGAGTTCAAAATGGAGCTGAGAAAAACTAAGAAGAAGAAAGTGAAGCTTGCAGAGAGTTCTGAATCGTTAACAGATTCACCTTCTGGTTCTGTTCCTGCGAGGAAGAAGACATTGAAGCAATGTGATACACAATTGGATCTTATAAGAATGGTTTTGGAGAGAGAAGTTGAGAAGAGGAAAAGAAACAATACCAATAAGAAGAAGAATAAGAAAAAGAAGATGAAGAAAAAGGTGATTAAAGAAGAAGTGGAATTGCATGATTTTAAAGAAGGTGAGTTGAGGAGAGAATTACCAAATGGAGTAATGGAGATATCACCTGCTTCGACGCCGGGTGATTATAAAAATGTGGGGACTCATTGTGATGTGAAAGTTGGTGATCATAAGATTGTAGCTGTAACGCCGCATTACTTCAGGTCCAAGAATATTGATAGGGTTGCTCTTGGAAAGTTGCAGGTTGTGCCTTATGGACCAAACTTGAAGAAGGGGAACATTAAGAGGAAGTGTCACTCATGCCAGAGAAGTGATTCTTTGAATCTTGTCCAGTGTTCGAGCTGCCACAAGGAGTTTTTCTGCTTTGATTGTATAAGAGATCGGTATCTTGACACTAGAAAAGAAGTTAAGAAGGCGTGCCCAGTTTGTCAACGGACTTGCACTTGTAAGGTCTGCTTGGCAAGTGAAAGTAATGGCAGTGAAAGTAAGGACAGTGAAAGTAAGGCCTATTTGTCTAGCAAAAGTAGAGTTGATAGAATACTCCATTTTCATTATTTAATTTGCATGCTCCTTCCATTACTAAAGCGAATAAGTGAAAACCGAGAAACTGAGCTAGCAACAGAAGCAAAAATTAAAGGGAAAAGTATTTCTGATATTCAAATCAAGCAGGTTGAATTTGGTTACAGTGAAAATATTTGCTGCAATCACTGCAAAACACCTGTCTTGGATCTTCATAGAAGCTGTGATAGTTGTTCATATAGCCTATGCTTAAGATGTTGTGAGAAATTATGTCAAGGAAGAACTTCTGGAGAAATTAACTCATCTTTCTTGAAGCTACGTGATCAAATGAAAGCTTGTGTCGACAGTGAGCACCGTATTTTGGATCAGAAGGACATTTGTTGTGGCAATTTAACTGCAACTTCAACATTGCCCCAGAGGACAAATGGTAATGATATTGACAAAGCTTCATGCCGTCCTACGGAGGTTGGTGGATGTGACACAGGCCTATTTGATTTAACTGCTACTTCAACATTGCCCGAGCATACAAATTGTAATGATATTCAAAAAGTATCATGCCCTCCTATGGAGCTTGGTGGATGTGGTACAGGCCTGCTTGATTTAACTACTACTTCAACATTGCCTGAGAGGACAAATTGTAATGACAGCGAAAAAGGATCATGCCCTCCTACGGAGCTTGGTGGACGAGATACAGGTCTGCTTGATTTAACTACTACTTCGTTGCCCGAGATGACAAATTGTAATGATAGGAAAAAAGTATCATGCCCTCCTACGGAGCTTGATGGACGAGATACAGGTCTGCTTGATTTAACTGCTACTTCAACATTGCCCGAGATGACCAATTTTAGTGATAGCGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGAATCTAGTACAGGTCTGCTTGATTTAACTGCTACTTCAACATTGCCCGAGAGGACAAATTGTAATGATATTGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGACGGGATACAGACCTGCTTGATTTAACTGCTACTTCAACATTGCCAGAGAGGACAAATTGTAATGATATCGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGACGAGATACAGACATGCTTGATTTAACTGCTACTTCAACGTCGCCCGAGAGGACAAATTGTAATGATATTGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGATGTGGTACAGGCCTTCTTGATTTATTATGCATTTTTCCCTCGACTTTACTCAGAGAGATGGAAGTAAAAGCAGAAGAAATTGTTTGTAGCTATGACTTTCCTGAAACTTCGGATAAAAGTTCAAGCTGCTCACTGTGTTTTGACACCGACCTTAATACTGATCGATATAATCAGTTGCAGAAAGCAGCTGAGAGAGGAGATTCATCAGATAATTGCTTGTTTTGTCCTACAGTTTTGGACATCAGTGGTGATAACTTTGAGCACTTTCAGAAACACTGGGGAAAAGGCCAGCCTATAGTGGTCCAAGATGTGCTCCAAAGTACATCAAACCTCAGTTGGAATCCACTGTTCATGTTCTGTACTTATCTTGAGCAGAGCATTACAAAGTATGAGAATAATAAAGAGTTACTTGAATCCTGTTTGGATTGGTGTGAGGTGGAAATAAACATTAGGCAGTATTTTACCGGGTCTCTCAAATGTCGTCCTCAGAGAAACACTTGGCATGAGATGCTGAAACTGAAGGGATGGCTGTCTTCCCAAGTATTCAAAGAGCAGTTTCCAGCTCATTTTTCTGAAGTAATTGATGCTCTACCAGTTCAAGAATACATGAATCCTGTGTCTGGTCTTCTGAATTTAGCTGCAAATTTGCCAGACGGGAGTCCGAAACATGACATTGGGCCATATGTCTATATTTCGTATGGCTGTGCTGACACAGAAGCTGATTCTGTGACAAAACTCTGTTGTGACTCATATGATGTGGTTAATATTATGACACATTCTGCGGATGTCCCTCTCTCTACAGAACAACTTGCAAAAATAAGGAAATTGTTGAAGAAGCACAAAGCTCTGTGTCAAATGGAGTCTGTTGCCACTGAGCTGTTACCTGAACGGGAAGTGAAAGGGATGGCATTATCACATGCTGAAGAAACGGTACAAAAAGGTTTACCGAGTATGGGGAAAGAAGGAATCGAGTTTTTCAGGAGAGTCGATAGAACATCTTGCATCTCCTCAACTGGAGCTAAAATAGCTTCTACTCAGAGCATATACAACAATATTTCCCAGGACGGAGAACGGAATATCGTTTCTGATTCTGAACCCTCTCTTCATGGGACTGTTCCTACCACCAATTTGTCACCTAGAAGTCCCGCTGAAAGCTCTAACTGTTATAAGAAAAAGTTCACTGAGCATTCAGGTGCCCAGTGGGATGTCTTTCGAAGACAAGATGTGCCAAAGCTCGTAGAATACATTAAAAGACACTACGATGAACTTACTAATACTCATGACTCTCACAAGAAGATGGTTCATCCAATTCTAGATCAGAGCATTTTTCTTGACCATATTCACAAAATGAGACTGAAGGAGGAGTTTAAGATTGAACCATGGACTTTCCAGCAACATGTTGGAGAAGCTGTCATCATTCCTGCTGGTTGTCCGTACCAGATAAGGAATTCTAAGTGTTGTGTCCATGCGGTATTGGAGTTTGTGTCCCCTGAAAATGTTGCCGAGTGTATCCAGTTGATTGACGAGGTCAGACGGTTACCTGAAGACCATAAAGCAAAAGTAGACAAGCTTGAGGTGAAGAAAATGGCGCTACATAGCATGAGTGCAGCAATTGACGAAATACGCCAGCTTACATGCAAAACATGA
Protein sequence

>Msa0696340

MARKSSSATEEPLPDELRCGRTDGKQWRCKRRVMDNLKLCEIHYLQGKHRQYREKVPESLKLQRKRKNKEEQEEETVVGVDNVEETVRVEKEFKMELRKTKKKKVKLAESSESLTDSPSGSVPARKKTLKQCDTQLDLIRMVLEREVEKRKRNNTNKKKNKKKKMKKKVIKEEVELHDFKEGELRRELPNGVMEISPASTPGDYKNVGTHCDVKVGDHKIVAVTPHYFRSKNIDRVALGKLQVVPYGPNLKKGNIKRKCHSCQRSDSLNLVQCSSCHKEFFCFDCIRDRYLDTRKEVKKACPVCQRTCTCKVCLASESNGSESKDSESKAYLSSKSRVDRILHFHYLICMLLPLLKRISENRETELATEAKIKGKSISDIQIKQVEFGYSENICCNHCKTPVLDLHRSCDSCSYSLCLRCCEKLCQGRTSGEINSSFLKLRDQMKACVDSEHRILDQKDICCGNLTATSTLPQRTNGNDIDKASCRPTEVGGCDTGLFDLTATSTLPEHTNCNDIQKVSCPPMELGGCGTGLLDLTTTSTLPERTNCNDSEKGSCPPTELGGRDTGLLDLTTTSLPEMTNCNDRKKVSCPPTELDGRDTGLLDLTATSTLPEMTNFSDSEKVSCPPTELGESSTGLLDLTATSTLPERTNCNDIEKVSCPPTELGGRDTDLLDLTATSTLPERTNCNDIEKVSCPPTELGGRDTDMLDLTATSTSPERTNCNDIEKVSCPPTELGGCGTGLLDLLCIFPSTLLREMEVKAEEIVCSYDFPETSDKSSSCSLCFDTDLNTDRYNQLQKAAERGDSSDNCLFCPTVLDISGDNFEHFQKHWGKGQPIVVQDVLQSTSNLSWNPLFMFCTYLEQSITKYENNKELLESCLDWCEVEINIRQYFTGSLKCRPQRNTWHEMLKLKGWLSSQVFKEQFPAHFSEVIDALPVQEYMNPVSGLLNLAANLPDGSPKHDIGPYVYISYGCADTEADSVTKLCCDSYDVVNIMTHSADVPLSTEQLAKIRKLLKKHKALCQMESVATELLPEREVKGMALSHAEETVQKGLPSMGKEGIEFFRRVDRTSCISSTGAKIASTQSIYNNISQDGERNIVSDSEPSLHGTVPTTNLSPRSPAESSNCYKKKFTEHSGAQWDVFRRQDVPKLVEYIKRHYDELTNTHDSHKKMVHPILDQSIFLDHIHKMRLKEEFKIEPWTFQQHVGEAVIIPAGCPYQIRNSKCCVHAVLEFVSPENVAECIQLIDEVRRLPEDHKAKVDKLEVKKMALHSMSAAIDEIRQLTCKT*