Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696610 | AES90525.2 | 95.806 | 310 | 12 | 1 | 1 | 309 | 24 | 333 | 0.0 | 614 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696610 | sp|Q9T072|BH025_ARATH | 56.111 | 180 | 74 | 3 | 133 | 309 | 151 | 328 | 1.76e-55 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696610 | G7JTZ1 | 95.806 | 310 | 12 | 1 | 1 | 309 | 24 | 333 | 0.0 | 614 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0696610 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696610 | MtrunA17_Chr4g0049331 | 95.806 | 310 | 12 | 1 | 1 | 309 | 1 | 310 | 0.0 | 613 |
| Msa0696610 | MtrunA17_Chr2g0280161 | 54.441 | 349 | 114 | 9 | 4 | 309 | 7 | 353 | 6.63e-113 | 330 |
| Msa0696610 | MtrunA17_Chr5g0400661 | 47.131 | 244 | 95 | 6 | 88 | 305 | 98 | 333 | 1.85e-59 | 193 |
| Msa0696610 | MtrunA17_Chr4g0054561 | 43.462 | 260 | 137 | 6 | 54 | 309 | 75 | 328 | 4.42e-55 | 182 |
| Msa0696610 | MtrunA17_Chr4g0054551 | 43.077 | 260 | 138 | 6 | 54 | 309 | 75 | 328 | 3.91e-53 | 176 |
| Msa0696610 | MtrunA17_Chr5g0400621 | 50.267 | 187 | 91 | 2 | 117 | 302 | 140 | 325 | 1.54e-52 | 175 |
| Msa0696610 | MtrunA17_Chr4g0054571 | 48.889 | 225 | 89 | 8 | 94 | 302 | 111 | 325 | 1.96e-46 | 159 |
| Msa0696610 | MtrunA17_Chr5g0400671 | 33.538 | 325 | 179 | 9 | 1 | 305 | 15 | 322 | 2.73e-46 | 159 |
| Msa0696610 | MtrunA17_Chr8g0336681 | 38.819 | 237 | 119 | 6 | 75 | 302 | 112 | 331 | 9.59e-45 | 155 |
| Msa0696610 | MtrunA17_Chr2g0333621 | 48.000 | 175 | 86 | 2 | 134 | 305 | 138 | 310 | 5.50e-44 | 152 |
| Msa0696610 | MtrunA17_Chr6g0468491 | 46.111 | 180 | 95 | 2 | 124 | 302 | 127 | 305 | 1.21e-43 | 151 |
| Msa0696610 | MtrunA17_Chr4g0054581 | 45.729 | 199 | 98 | 5 | 118 | 309 | 182 | 377 | 2.64e-43 | 152 |
| Msa0696610 | MtrunA17_Chr2g0307131 | 42.935 | 184 | 105 | 0 | 126 | 309 | 171 | 354 | 2.38e-41 | 147 |
| Msa0696610 | MtrunA17_Chr4g0002801 | 44.944 | 178 | 92 | 1 | 134 | 305 | 152 | 329 | 1.01e-40 | 144 |
| Msa0696610 | MtrunA17_Chr4g0033291 | 34.551 | 301 | 140 | 9 | 32 | 308 | 59 | 326 | 1.42e-40 | 144 |
| Msa0696610 | MtrunA17_Chr2g0307141 | 43.529 | 170 | 96 | 0 | 133 | 302 | 182 | 351 | 8.82e-40 | 142 |
| Msa0696610 | MtrunA17_Chr4g0002781 | 45.714 | 175 | 92 | 2 | 134 | 305 | 174 | 348 | 2.71e-39 | 141 |
| Msa0696610 | MtrunA17_Chr5g0400641 | 45.806 | 155 | 82 | 2 | 137 | 290 | 1 | 154 | 3.29e-38 | 133 |
| Msa0696610 | MtrunA17_Chr4g0033391 | 41.799 | 189 | 96 | 4 | 126 | 309 | 140 | 319 | 5.13e-38 | 137 |
| Msa0696610 | MtrunA17_Chr2g0333641 | 44.253 | 174 | 95 | 1 | 134 | 307 | 137 | 308 | 1.10e-37 | 136 |
| Msa0696610 | MtrunA17_Chr7g0225901 | 44.643 | 168 | 81 | 3 | 126 | 287 | 80 | 241 | 1.67e-37 | 134 |
| Msa0696610 | MtrunA17_Chr7g0249811 | 44.211 | 190 | 94 | 5 | 114 | 302 | 146 | 324 | 4.27e-37 | 135 |
| Msa0696610 | MtrunA17_Chr4g0033281 | 39.409 | 203 | 110 | 4 | 114 | 309 | 128 | 324 | 5.15e-37 | 134 |
| Msa0696610 | MtrunA17_Chr2g0333611 | 37.288 | 177 | 95 | 4 | 133 | 302 | 44 | 211 | 1.05e-34 | 125 |
| Msa0696610 | MtrunA17_Chr4g0054621 | 39.326 | 178 | 99 | 2 | 133 | 309 | 171 | 340 | 2.09e-34 | 128 |
| Msa0696610 | MtrunA17_Chr6g0468461 | 46.753 | 154 | 68 | 4 | 133 | 286 | 172 | 311 | 8.57e-31 | 118 |
| Msa0696610 | MtrunA17_Chr2g0333541 | 37.624 | 202 | 116 | 5 | 109 | 306 | 73 | 268 | 2.50e-28 | 110 |
| Msa0696610 | MtrunA17_Chr7g0233441 | 36.424 | 151 | 86 | 2 | 157 | 307 | 57 | 197 | 3.35e-24 | 97.4 |
| Msa0696610 | MtrunA17_Chr4g0002831 | 37.853 | 177 | 96 | 6 | 132 | 307 | 42 | 205 | 6.04e-24 | 97.1 |
| Msa0696610 | MtrunA17_Chr4g0002851 | 35.099 | 151 | 80 | 2 | 157 | 307 | 65 | 197 | 4.25e-22 | 91.7 |
| Msa0696610 | MtrunA17_Chr7g0275821 | 35.507 | 138 | 79 | 3 | 132 | 268 | 250 | 378 | 3.32e-17 | 81.6 |
| Msa0696610 | MtrunA17_Chr7g0260841 | 56.250 | 64 | 28 | 0 | 132 | 195 | 353 | 416 | 3.73e-17 | 81.6 |
| Msa0696610 | MtrunA17_Chr8g0366751 | 32.278 | 158 | 78 | 3 | 132 | 269 | 460 | 608 | 1.25e-16 | 80.5 |
| Msa0696610 | MtrunA17_Chr1g0185621 | 31.293 | 147 | 93 | 2 | 127 | 265 | 468 | 614 | 1.19e-15 | 77.4 |
| Msa0696610 | MtrunA17_Chr8g0346161 | 29.091 | 165 | 98 | 4 | 119 | 272 | 274 | 430 | 3.37e-15 | 75.9 |
| Msa0696610 | MtrunA17_Chr5g0411341 | 30.201 | 149 | 93 | 2 | 132 | 269 | 491 | 639 | 2.59e-14 | 73.6 |
| Msa0696610 | MtrunA17_Chr3g0131691 | 26.455 | 189 | 117 | 4 | 102 | 280 | 278 | 454 | 1.53e-13 | 70.9 |
| Msa0696610 | MtrunA17_Chr8g0365711 | 27.236 | 246 | 161 | 9 | 50 | 283 | 159 | 398 | 9.50e-13 | 68.2 |
| Msa0696610 | MtrunA17_Chr7g0252041 | 27.059 | 170 | 96 | 3 | 131 | 280 | 283 | 444 | 1.05e-12 | 68.2 |
| Msa0696610 | MtrunA17_Chr2g0298751 | 27.439 | 164 | 102 | 4 | 135 | 283 | 53 | 214 | 1.54e-12 | 66.2 |
| Msa0696610 | MtrunA17_Chr8g0346151 | 26.630 | 184 | 117 | 4 | 119 | 290 | 262 | 439 | 2.41e-12 | 67.0 |
| Msa0696610 | MtrunA17_Chr8g0386921 | 43.284 | 67 | 38 | 0 | 124 | 190 | 396 | 462 | 3.59e-12 | 67.0 |
| Msa0696610 | MtrunA17_Chr1g0211081 | 50.909 | 55 | 27 | 0 | 135 | 189 | 318 | 372 | 1.06e-11 | 65.5 |
| Msa0696610 | MtrunA17_Chr2g0320291 | 28.777 | 139 | 93 | 4 | 136 | 272 | 135 | 269 | 1.18e-11 | 64.3 |
| Msa0696610 | MtrunA17_Chr4g0028071 | 27.711 | 166 | 103 | 5 | 136 | 296 | 151 | 304 | 4.85e-11 | 62.8 |
| Msa0696610 | MtrunA17_Chr5g0411541 | 23.311 | 296 | 183 | 9 | 37 | 301 | 32 | 314 | 7.84e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696610 | AT4G37850.2 | 56.111 | 180 | 74 | 3 | 133 | 309 | 151 | 328 | 1.79e-56 | 186 |
| Msa0696610 | AT4G37850.1 | 56.111 | 180 | 74 | 3 | 133 | 309 | 151 | 328 | 1.79e-56 | 186 |
| Msa0696610 | AT2G22760.1 | 48.864 | 176 | 86 | 2 | 131 | 302 | 116 | 291 | 1.82e-49 | 166 |
| Msa0696610 | AT2G22750.2 | 51.174 | 213 | 91 | 7 | 96 | 301 | 91 | 297 | 9.80e-46 | 157 |
| Msa0696610 | AT2G22750.5 | 51.174 | 213 | 91 | 7 | 96 | 301 | 115 | 321 | 1.20e-45 | 157 |
| Msa0696610 | AT2G22750.3 | 51.174 | 213 | 91 | 7 | 96 | 301 | 119 | 325 | 1.20e-45 | 157 |
| Msa0696610 | AT2G22750.1 | 51.174 | 213 | 90 | 8 | 96 | 301 | 91 | 296 | 2.70e-44 | 153 |
| Msa0696610 | AT2G22750.4 | 51.174 | 213 | 90 | 8 | 96 | 301 | 119 | 324 | 3.79e-44 | 154 |
| Msa0696610 | AT2G22770.1 | 40.773 | 233 | 107 | 5 | 85 | 302 | 99 | 315 | 1.73e-42 | 149 |
| Msa0696610 | AT2G22760.2 | 46.541 | 159 | 82 | 1 | 131 | 286 | 116 | 274 | 2.31e-41 | 145 |
| Msa0696610 | AT2G46510.1 | 42.342 | 111 | 46 | 2 | 132 | 242 | 393 | 485 | 3.28e-18 | 85.5 |
| Msa0696610 | AT1G32640.1 | 37.063 | 143 | 83 | 2 | 132 | 270 | 450 | 589 | 2.25e-17 | 82.8 |
| Msa0696610 | AT4G17880.1 | 31.944 | 144 | 88 | 3 | 132 | 270 | 414 | 552 | 2.80e-15 | 76.6 |
| Msa0696610 | AT5G46760.1 | 32.895 | 152 | 80 | 4 | 132 | 270 | 413 | 555 | 5.50e-15 | 75.9 |
| Msa0696610 | AT1G01260.1 | 45.455 | 77 | 40 | 1 | 116 | 190 | 413 | 489 | 1.56e-14 | 74.3 |
| Msa0696610 | AT1G01260.2 | 45.455 | 77 | 40 | 1 | 116 | 190 | 413 | 489 | 1.56e-14 | 74.3 |
| Msa0696610 | AT1G01260.3 | 45.455 | 77 | 40 | 1 | 116 | 190 | 413 | 489 | 1.56e-14 | 74.3 |
| Msa0696610 | AT4G16430.1 | 51.562 | 64 | 31 | 0 | 134 | 197 | 320 | 383 | 2.06e-14 | 73.9 |
| Msa0696610 | AT4G29930.2 | 30.357 | 168 | 103 | 6 | 123 | 289 | 46 | 200 | 2.03e-13 | 68.9 |
| Msa0696610 | AT4G09820.1 | 29.496 | 139 | 75 | 3 | 131 | 266 | 357 | 475 | 2.21e-13 | 70.9 |
| Msa0696610 | AT1G12860.2 | 30.573 | 157 | 101 | 5 | 131 | 280 | 264 | 419 | 2.44e-13 | 70.5 |
| Msa0696610 | AT4G29930.6 | 27.933 | 179 | 96 | 5 | 123 | 289 | 46 | 203 | 2.50e-13 | 68.6 |
| Msa0696610 | AT1G12860.1 | 30.573 | 157 | 101 | 5 | 131 | 280 | 264 | 419 | 3.38e-13 | 70.1 |
| Msa0696610 | AT2G16910.1 | 28.646 | 192 | 105 | 5 | 135 | 300 | 315 | 500 | 3.99e-13 | 70.1 |
| Msa0696610 | AT3G26744.6 | 28.750 | 160 | 104 | 3 | 131 | 280 | 304 | 463 | 7.59e-13 | 69.3 |
| Msa0696610 | AT3G26744.1 | 28.750 | 160 | 104 | 3 | 131 | 280 | 304 | 463 | 8.71e-13 | 68.9 |
| Msa0696610 | AT3G26744.4 | 28.750 | 160 | 104 | 3 | 131 | 280 | 304 | 463 | 8.71e-13 | 68.9 |
| Msa0696610 | AT3G26744.2 | 28.750 | 160 | 104 | 3 | 131 | 280 | 304 | 463 | 8.71e-13 | 68.9 |
| Msa0696610 | AT5G57150.5 | 30.769 | 156 | 85 | 4 | 135 | 274 | 55 | 203 | 1.11e-12 | 66.6 |
| Msa0696610 | AT5G57150.3 | 30.769 | 156 | 85 | 4 | 135 | 274 | 56 | 204 | 1.15e-12 | 66.6 |
| Msa0696610 | AT5G57150.2 | 30.769 | 156 | 85 | 4 | 135 | 274 | 56 | 204 | 1.24e-12 | 66.6 |
| Msa0696610 | AT4G29930.5 | 29.091 | 165 | 103 | 5 | 123 | 286 | 46 | 197 | 1.27e-12 | 66.6 |
| Msa0696610 | AT5G57150.1 | 31.210 | 157 | 83 | 4 | 135 | 274 | 55 | 203 | 1.95e-12 | 66.2 |
| Msa0696610 | AT5G57150.4 | 30.769 | 156 | 85 | 4 | 135 | 274 | 56 | 204 | 3.17e-12 | 65.9 |
| Msa0696610 | AT1G63650.3 | 36.145 | 83 | 53 | 0 | 134 | 216 | 405 | 487 | 4.36e-12 | 67.0 |
| Msa0696610 | AT1G63650.1 | 36.145 | 83 | 53 | 0 | 134 | 216 | 405 | 487 | 4.36e-12 | 67.0 |
| Msa0696610 | AT1G63650.2 | 36.145 | 83 | 53 | 0 | 134 | 216 | 405 | 487 | 4.36e-12 | 67.0 |
| Msa0696610 | AT3G61950.6 | 28.369 | 141 | 99 | 1 | 134 | 272 | 128 | 268 | 2.26e-11 | 63.9 |
| Msa0696610 | AT3G61950.2 | 28.369 | 141 | 99 | 1 | 134 | 272 | 128 | 268 | 3.54e-11 | 63.5 |
| Msa0696610 | AT3G61950.3 | 28.369 | 141 | 99 | 1 | 134 | 272 | 179 | 319 | 4.27e-11 | 63.5 |
| Msa0696610 | AT4G00870.1 | 49.091 | 55 | 28 | 0 | 135 | 189 | 250 | 304 | 5.48e-11 | 63.5 |
| Msa0696610 | AT5G46830.1 | 48.333 | 60 | 31 | 0 | 132 | 191 | 341 | 400 | 5.90e-11 | 63.5 |
| Msa0696610 | AT3G61950.1 | 28.369 | 141 | 99 | 1 | 134 | 272 | 179 | 319 | 6.30e-11 | 63.2 |
| Msa0696610 | AT5G41315.3 | 39.286 | 84 | 43 | 2 | 112 | 187 | 416 | 499 | 6.74e-11 | 63.5 |
| Msa0696610 | AT5G41315.2 | 39.286 | 84 | 43 | 2 | 112 | 187 | 419 | 502 | 6.88e-11 | 63.5 |
| Msa0696610 | AT5G41315.1 | 39.286 | 84 | 43 | 2 | 112 | 187 | 411 | 494 | 7.10e-11 | 63.5 |
| Msa0696610 | AT4G29930.1 | 26.596 | 188 | 113 | 5 | 123 | 289 | 46 | 229 | 8.96e-11 | 61.6 |
Find 55 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATCTTGCTTCAATTTC+TGG | 0.046048 | 4_4:+66569097 | None:intergenic |
| GCTCTATCTGCCCTTGTTCC+TGG | 0.240482 | 4_4:-66569590 | Msa0696610:CDS |
| GCAGTTTCCATTGAAGTTCT+AGG | 0.252953 | 4_4:+66569869 | None:intergenic |
| ATGGACAAAGTTACTGTTCT+TGG | 0.276006 | 4_4:-66569289 | Msa0696610:CDS |
| AATAGCAGTTTCATGACATT+TGG | 0.296146 | 4_4:-66568977 | Msa0696610:CDS |
| GCTTTCTTTCAGCTACTATA+TGG | 0.308218 | 4_4:+66569642 | None:intergenic |
| GTTCACTGTGAGAAAATAAA+AGG | 0.311616 | 4_4:-66569052 | Msa0696610:CDS |
| CTGCCAATAGGTACTGCTTT+TGG | 0.314519 | 4_4:-66569935 | Msa0696610:CDS |
| GATTGAGTTTCTCGATTTCA+TGG | 0.323483 | 4_4:+66569011 | None:intergenic |
| GTGCAATTTGCAGATGGATA+TGG | 0.328392 | 4_4:-66568746 | Msa0696610:intron |
| AGGAACCTTTGAGGCCAAAA+AGG | 0.379217 | 4_4:-66569699 | Msa0696610:CDS |
| TCGACAAATGAAAGAAGATT+CGG | 0.392423 | 4_4:+66569815 | None:intergenic |
| GAAGTTCTAGGGTTGAAGTT+TGG | 0.405401 | 4_4:+66569881 | None:intergenic |
| TATCAGAGGGTTTCCTGAGC+AGG | 0.415708 | 4_4:-66570234 | Msa0696610:intron |
| ATAGCAGTTTCATGACATTT+GGG | 0.420095 | 4_4:-66568976 | Msa0696610:CDS |
| GAAAACTCTTCTGCAGAATC+TGG | 0.430912 | 4_4:-66569142 | Msa0696610:CDS |
| TTTGAATCAGTTAAATCAGT+TGG | 0.433019 | 4_4:-66569792 | Msa0696610:CDS |
| TCTCACAGTGAACTCTTATG+AGG | 0.440028 | 4_4:+66569062 | None:intergenic |
| CTTCAACCCTAGAACTTCAA+TGG | 0.444938 | 4_4:-66569876 | Msa0696610:CDS |
| CAGTTTCCATTGAAGTTCTA+GGG | 0.451054 | 4_4:+66569870 | None:intergenic |
| TTGAATCAGTTAAATCAGTT+GGG | 0.451883 | 4_4:-66569791 | Msa0696610:CDS |
| GAGTCTAACTCACTGCCAAT+AGG | 0.462111 | 4_4:-66569947 | Msa0696610:CDS |
| GAACCAATCATCTCATCCTT+AGG | 0.467424 | 4_4:+66569758 | None:intergenic |
| TCTCCAAAAGCAGTACCTAT+TGG | 0.467684 | 4_4:+66569932 | None:intergenic |
| GAGAATATTTCATTTATCAG+AGG | 0.468225 | 4_4:-66570248 | Msa0696610:CDS |
| CGACAAATGAAAGAAGATTC+GGG | 0.471965 | 4_4:+66569816 | None:intergenic |
| ACTATATGTCTTACCTGCTC+AGG | 0.472883 | 4_4:+66570221 | None:intergenic |
| TTCTGGCAGTTCCTCGTCAA+AGG | 0.474337 | 4_4:+66569114 | None:intergenic |
| TTTGATCTTGCAGGAAATGA+TGG | 0.481839 | 4_4:-66570017 | Msa0696610:intron |
| CCTTGTTCCTGGACTACAAA+AGG | 0.484384 | 4_4:-66569579 | Msa0696610:intron |
| GATTTCTCAAGGAACCTTTG+AGG | 0.485480 | 4_4:-66569708 | Msa0696610:CDS |
| AAATGTCATGAAACTGCTAT+TGG | 0.489746 | 4_4:+66568979 | None:intergenic |
| TCTGGCAGTTCCTCGTCAAA+GGG | 0.506650 | 4_4:+66569115 | None:intergenic |
| CTTCATTTCTTCATCGTCAG+TGG | 0.509736 | 4_4:-66569988 | Msa0696610:CDS |
| TCAGTTAAATCAGTTGGGAT+TGG | 0.511136 | 4_4:-66569786 | Msa0696610:CDS |
| TCTTGAGGAAGAGAGAGCTT+AGG | 0.514134 | 4_4:+66569665 | None:intergenic |
| AAGCCTAAGGATGAGATGAT+TGG | 0.518114 | 4_4:-66569761 | Msa0696610:CDS |
| TGAGAAAATAAAAGGAGTTG+TGG | 0.528193 | 4_4:-66569044 | Msa0696610:CDS |
| CACTGACGATGAAGAAATGA+AGG | 0.528531 | 4_4:+66569989 | None:intergenic |
| TGATATAACAATTATTGCAC+AGG | 0.531379 | 4_4:-66568942 | Msa0696610:intron |
| CAGATAGAGCAATGAAGCGC+TGG | 0.536270 | 4_4:+66569603 | None:intergenic |
| AGAATATTTCATTTATCAGA+GGG | 0.537343 | 4_4:-66570247 | Msa0696610:CDS |
| GTTGGGATTGGTGAAGCCTA+AGG | 0.542119 | 4_4:-66569774 | Msa0696610:CDS |
| ACTTCTGACATGATTTCTCA+AGG | 0.567842 | 4_4:-66569719 | Msa0696610:CDS |
| AGTTTGGATAAACGTATGAA+TGG | 0.568981 | 4_4:+66569897 | None:intergenic |
| AGAGAAGGTGAAGGTTCTTG+AGG | 0.571434 | 4_4:-66569236 | Msa0696610:CDS |
| CTTAAAGAAATTGCAAGAGA+AGG | 0.587502 | 4_4:-66569251 | Msa0696610:CDS |
| TCAGCTACTATATGGTCTTG+AGG | 0.590748 | 4_4:+66569650 | None:intergenic |
| GAAGGTGAAGGTTCTTGAGG+AGG | 0.607165 | 4_4:-66569233 | Msa0696610:CDS |
| AACTCTTCTGCAGAATCTGG+TGG | 0.615291 | 4_4:-66569139 | Msa0696610:CDS |
| ATATAGTAGCTGAAAGAAAG+CGG | 0.618259 | 4_4:-66569640 | Msa0696610:CDS |
| AATGAAAGAAGATTCGGGTA+CGG | 0.630607 | 4_4:+66569821 | None:intergenic |
| ATCTGGTGGTCCCTTTGACG+AGG | 0.636520 | 4_4:-66569125 | Msa0696610:CDS |
| GATCTTGCAGGAAATGATGG+AGG | 0.636854 | 4_4:-66570014 | Msa0696610:intron |
| GAAATTGCAAGAGAAGGTGA+AGG | 0.649815 | 4_4:-66569245 | Msa0696610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATATTTCATTTATCAGA+GGG | - | chr4_4:66568685-66568704 | Msa0696610:CDS | 20.0% |
| !! | AAAGAGAAGTAATCTAATAA+AGG | - | chr4_4:66568845-66568864 | Msa0696610:intron | 20.0% |
| !! | ATTTAGTGTTTACTATTAGT+AGG | - | chr4_4:66569536-66569555 | Msa0696610:intron | 20.0% |
| !! | AGAATATTTCATTTATCAGA+GGG | - | chr4_4:66568685-66568704 | Msa0696610:CDS | 20.0% |
| !! | AAAGAGAAGTAATCTAATAA+AGG | - | chr4_4:66568845-66568864 | Msa0696610:intron | 20.0% |
| !! | ATTTAGTGTTTACTATTAGT+AGG | - | chr4_4:66569536-66569555 | Msa0696610:intron | 20.0% |
| ! | GAGAATATTTCATTTATCAG+AGG | - | chr4_4:66568684-66568703 | Msa0696610:CDS | 25.0% |
| ! | CTTACTATACATTCATACTT+TGG | - | chr4_4:66568758-66568777 | Msa0696610:intron | 25.0% |
| !! | TTTTCTAACCAAATGTTAGA+TGG | + | chr4_4:66568802-66568821 | None:intergenic | 25.0% |
| ! | TTTGAATCAGTTAAATCAGT+TGG | - | chr4_4:66569140-66569159 | Msa0696610:CDS | 25.0% |
| ! | TTGAATCAGTTAAATCAGTT+GGG | - | chr4_4:66569141-66569160 | Msa0696610:CDS | 25.0% |
| ! | CTCTACAAAACAAATTTGTA+AGG | - | chr4_4:66569429-66569448 | Msa0696610:intron | 25.0% |
| ! | GTGAATATATAATGTGTTTG+TGG | - | chr4_4:66569566-66569585 | Msa0696610:intron | 25.0% |
| ! | TGATATAACAATTATTGCAC+AGG | - | chr4_4:66569990-66570009 | Msa0696610:CDS | 25.0% |
| ! | ACTACAATTGTCTATCAATA+TGG | - | chr4_4:66570154-66570173 | Msa0696610:intron | 25.0% |
| ! | GAGAATATTTCATTTATCAG+AGG | - | chr4_4:66568684-66568703 | Msa0696610:CDS | 25.0% |
| ! | CTTACTATACATTCATACTT+TGG | - | chr4_4:66568758-66568777 | Msa0696610:intron | 25.0% |
| !! | TTTTCTAACCAAATGTTAGA+TGG | + | chr4_4:66568802-66568821 | None:intergenic | 25.0% |
| ! | TTTGAATCAGTTAAATCAGT+TGG | - | chr4_4:66569140-66569159 | Msa0696610:CDS | 25.0% |
| ! | TTGAATCAGTTAAATCAGTT+GGG | - | chr4_4:66569141-66569160 | Msa0696610:CDS | 25.0% |
| ! | CTCTACAAAACAAATTTGTA+AGG | - | chr4_4:66569429-66569448 | Msa0696610:intron | 25.0% |
| ! | GTGAATATATAATGTGTTTG+TGG | - | chr4_4:66569566-66569585 | Msa0696610:intron | 25.0% |
| ! | TGATATAACAATTATTGCAC+AGG | - | chr4_4:66569990-66570009 | Msa0696610:CDS | 25.0% |
| ! | ACTACAATTGTCTATCAATA+TGG | - | chr4_4:66570154-66570173 | Msa0696610:intron | 25.0% |
| !!! | TTTTGGAACCATCTAACATT+TGG | - | chr4_4:66568791-66568810 | Msa0696610:intron | 30.0% |
| ! | AGTAATCTAATAAAGGCACA+AGG | - | chr4_4:66568852-66568871 | Msa0696610:intron | 30.0% |
| ! | ACATGTTTTCACAATGTTCA+TGG | + | chr4_4:66568894-66568913 | None:intergenic | 30.0% |
| AGTTTGGATAAACGTATGAA+TGG | + | chr4_4:66569038-66569057 | None:intergenic | 30.0% | |
| TCGACAAATGAAAGAAGATT+CGG | + | chr4_4:66569120-66569139 | None:intergenic | 30.0% | |
| ATATAGTAGCTGAAAGAAAG+CGG | - | chr4_4:66569292-66569311 | Msa0696610:CDS | 30.0% | |
| AAAAACTTAAGTCCTGCATT+AGG | + | chr4_4:66569484-66569503 | None:intergenic | 30.0% | |
| TATCTATGTTGAACACATGT+TGG | - | chr4_4:66569510-66569529 | Msa0696610:intron | 30.0% | |
| TTTACTATTAGTAGGACACA+CGG | - | chr4_4:66569544-66569563 | Msa0696610:intron | 30.0% | |
| CTTAAAGAAATTGCAAGAGA+AGG | - | chr4_4:66569681-66569700 | Msa0696610:CDS | 30.0% | |
| ! | AGAAGAGTTTTCAACATCAT+TGG | + | chr4_4:66569782-66569801 | None:intergenic | 30.0% |
| CAAAATCTTGCTTCAATTTC+TGG | + | chr4_4:66569838-66569857 | None:intergenic | 30.0% | |
| GTTCACTGTGAGAAAATAAA+AGG | - | chr4_4:66569880-66569899 | Msa0696610:CDS | 30.0% | |
| TGAGAAAATAAAAGGAGTTG+TGG | - | chr4_4:66569888-66569907 | Msa0696610:CDS | 30.0% | |
| AAATGTCATGAAACTGCTAT+TGG | + | chr4_4:66569956-66569975 | None:intergenic | 30.0% | |
| AATAGCAGTTTCATGACATT+TGG | - | chr4_4:66569955-66569974 | Msa0696610:CDS | 30.0% | |
| ATAGCAGTTTCATGACATTT+GGG | - | chr4_4:66569956-66569975 | Msa0696610:CDS | 30.0% | |
| GACAATTGTAGTAATTTCGT+TGG | + | chr4_4:66570146-66570165 | None:intergenic | 30.0% | |
| ATATTTGTGCAATTTGCAGA+TGG | - | chr4_4:66570180-66570199 | Msa0696610:intron | 30.0% | |
| !!! | TTTTGGAACCATCTAACATT+TGG | - | chr4_4:66568791-66568810 | Msa0696610:intron | 30.0% |
| ! | AGTAATCTAATAAAGGCACA+AGG | - | chr4_4:66568852-66568871 | Msa0696610:intron | 30.0% |
| ! | ACATGTTTTCACAATGTTCA+TGG | + | chr4_4:66568894-66568913 | None:intergenic | 30.0% |
| AGTTTGGATAAACGTATGAA+TGG | + | chr4_4:66569038-66569057 | None:intergenic | 30.0% | |
| TCGACAAATGAAAGAAGATT+CGG | + | chr4_4:66569120-66569139 | None:intergenic | 30.0% | |
| ATATAGTAGCTGAAAGAAAG+CGG | - | chr4_4:66569292-66569311 | Msa0696610:CDS | 30.0% | |
| AAAAACTTAAGTCCTGCATT+AGG | + | chr4_4:66569484-66569503 | None:intergenic | 30.0% | |
| TATCTATGTTGAACACATGT+TGG | - | chr4_4:66569510-66569529 | Msa0696610:intron | 30.0% | |
| TTTACTATTAGTAGGACACA+CGG | - | chr4_4:66569544-66569563 | Msa0696610:intron | 30.0% | |
| CTTAAAGAAATTGCAAGAGA+AGG | - | chr4_4:66569681-66569700 | Msa0696610:CDS | 30.0% | |
| ! | AGAAGAGTTTTCAACATCAT+TGG | + | chr4_4:66569782-66569801 | None:intergenic | 30.0% |
| CAAAATCTTGCTTCAATTTC+TGG | + | chr4_4:66569838-66569857 | None:intergenic | 30.0% | |
| GTTCACTGTGAGAAAATAAA+AGG | - | chr4_4:66569880-66569899 | Msa0696610:CDS | 30.0% | |
| TGAGAAAATAAAAGGAGTTG+TGG | - | chr4_4:66569888-66569907 | Msa0696610:CDS | 30.0% | |
| AAATGTCATGAAACTGCTAT+TGG | + | chr4_4:66569956-66569975 | None:intergenic | 30.0% | |
| AATAGCAGTTTCATGACATT+TGG | - | chr4_4:66569955-66569974 | Msa0696610:CDS | 30.0% | |
| ATAGCAGTTTCATGACATTT+GGG | - | chr4_4:66569956-66569975 | Msa0696610:CDS | 30.0% | |
| GACAATTGTAGTAATTTCGT+TGG | + | chr4_4:66570146-66570165 | None:intergenic | 30.0% | |
| ATATTTGTGCAATTTGCAGA+TGG | - | chr4_4:66570180-66570199 | Msa0696610:intron | 30.0% | |
| ! | ACTTTGGCAGTGACTAATTT+TGG | - | chr4_4:66568774-66568793 | Msa0696610:intron | 35.0% |
| AAACATGTGTTTGATCTTGC+AGG | - | chr4_4:66568906-66568925 | Msa0696610:intron | 35.0% | |
| TTTGATCTTGCAGGAAATGA+TGG | - | chr4_4:66568915-66568934 | Msa0696610:intron | 35.0% | |
| CAGTTTCCATTGAAGTTCTA+GGG | + | chr4_4:66569065-66569084 | None:intergenic | 35.0% | |
| AATGAAAGAAGATTCGGGTA+CGG | + | chr4_4:66569114-66569133 | None:intergenic | 35.0% | |
| CGACAAATGAAAGAAGATTC+GGG | + | chr4_4:66569119-66569138 | None:intergenic | 35.0% | |
| TCAGTTAAATCAGTTGGGAT+TGG | - | chr4_4:66569146-66569165 | Msa0696610:CDS | 35.0% | |
| ACTTCTGACATGATTTCTCA+AGG | - | chr4_4:66569213-66569232 | Msa0696610:CDS | 35.0% | |
| GCTTTCTTTCAGCTACTATA+TGG | + | chr4_4:66569293-66569312 | None:intergenic | 35.0% | |
| ! | TTGTATACCTTTTGTAGTCC+AGG | + | chr4_4:66569363-66569382 | None:intergenic | 35.0% |
| TTGTAAGGTGAAGATTGCAT+AGG | - | chr4_4:66569444-66569463 | Msa0696610:intron | 35.0% | |
| ATGGACAAAGTTACTGTTCT+TGG | - | chr4_4:66569643-66569662 | Msa0696610:CDS | 35.0% | |
| ACAGAACATGAAGAAAAACG+TGG | - | chr4_4:66569723-66569742 | Msa0696610:CDS | 35.0% | |
| GAAGAAAAACGTGGAATTTG+TGG | - | chr4_4:66569732-66569751 | Msa0696610:CDS | 35.0% | |
| GATTGAGTTTCTCGATTTCA+TGG | + | chr4_4:66569924-66569943 | None:intergenic | 35.0% | |
| ! | GGATATGGAATTTTGCATGA+CGG | - | chr4_4:66570201-66570220 | Msa0696610:intron | 35.0% |
| ! | ACTTTGGCAGTGACTAATTT+TGG | - | chr4_4:66568774-66568793 | Msa0696610:intron | 35.0% |
| AAACATGTGTTTGATCTTGC+AGG | - | chr4_4:66568906-66568925 | Msa0696610:intron | 35.0% | |
| TTTGATCTTGCAGGAAATGA+TGG | - | chr4_4:66568915-66568934 | Msa0696610:intron | 35.0% | |
| CAGTTTCCATTGAAGTTCTA+GGG | + | chr4_4:66569065-66569084 | None:intergenic | 35.0% | |
| AATGAAAGAAGATTCGGGTA+CGG | + | chr4_4:66569114-66569133 | None:intergenic | 35.0% | |
| CGACAAATGAAAGAAGATTC+GGG | + | chr4_4:66569119-66569138 | None:intergenic | 35.0% | |
| TCAGTTAAATCAGTTGGGAT+TGG | - | chr4_4:66569146-66569165 | Msa0696610:CDS | 35.0% | |
| ACTTCTGACATGATTTCTCA+AGG | - | chr4_4:66569213-66569232 | Msa0696610:CDS | 35.0% | |
| GCTTTCTTTCAGCTACTATA+TGG | + | chr4_4:66569293-66569312 | None:intergenic | 35.0% | |
| ! | TTGTATACCTTTTGTAGTCC+AGG | + | chr4_4:66569363-66569382 | None:intergenic | 35.0% |
| TTGTAAGGTGAAGATTGCAT+AGG | - | chr4_4:66569444-66569463 | Msa0696610:intron | 35.0% | |
| ATGGACAAAGTTACTGTTCT+TGG | - | chr4_4:66569643-66569662 | Msa0696610:CDS | 35.0% | |
| ACAGAACATGAAGAAAAACG+TGG | - | chr4_4:66569723-66569742 | Msa0696610:CDS | 35.0% | |
| GAAGAAAAACGTGGAATTTG+TGG | - | chr4_4:66569732-66569751 | Msa0696610:CDS | 35.0% | |
| GATTGAGTTTCTCGATTTCA+TGG | + | chr4_4:66569924-66569943 | None:intergenic | 35.0% | |
| ! | GGATATGGAATTTTGCATGA+CGG | - | chr4_4:66570201-66570220 | Msa0696610:intron | 35.0% |
| ACTATATGTCTTACCTGCTC+AGG | + | chr4_4:66568714-66568733 | None:intergenic | 40.0% | |
| CACTGACGATGAAGAAATGA+AGG | + | chr4_4:66568946-66568965 | None:intergenic | 40.0% | |
| CTTCATTTCTTCATCGTCAG+TGG | - | chr4_4:66568944-66568963 | Msa0696610:CDS | 40.0% | |
| TCTCCAAAAGCAGTACCTAT+TGG | + | chr4_4:66569003-66569022 | None:intergenic | 40.0% | |
| !! | GAAGTTCTAGGGTTGAAGTT+TGG | + | chr4_4:66569054-66569073 | None:intergenic | 40.0% |
| CTTCAACCCTAGAACTTCAA+TGG | - | chr4_4:66569056-66569075 | Msa0696610:CDS | 40.0% | |
| GCAGTTTCCATTGAAGTTCT+AGG | + | chr4_4:66569066-66569085 | None:intergenic | 40.0% | |
| AAGCCTAAGGATGAGATGAT+TGG | - | chr4_4:66569171-66569190 | Msa0696610:CDS | 40.0% | |
| GAACCAATCATCTCATCCTT+AGG | + | chr4_4:66569177-66569196 | None:intergenic | 40.0% | |
| GATTTCTCAAGGAACCTTTG+AGG | - | chr4_4:66569224-66569243 | Msa0696610:CDS | 40.0% | |
| ! | TCAGCTACTATATGGTCTTG+AGG | + | chr4_4:66569285-66569304 | None:intergenic | 40.0% |
| ! | CTTTTGTAGTCCAGGAACAA+GGG | + | chr4_4:66569355-66569374 | None:intergenic | 40.0% |
| TTATGATCTCTGCCTAATGC+AGG | - | chr4_4:66569469-66569488 | Msa0696610:intron | 40.0% | |
| ATTGTGCTACGACTAACAGA+TGG | - | chr4_4:66569624-66569643 | Msa0696610:CDS | 40.0% | |
| GAAATTGCAAGAGAAGGTGA+AGG | - | chr4_4:66569687-66569706 | Msa0696610:CDS | 40.0% | |
| GAAAAACGTGGAATTTGTGG+TGG | - | chr4_4:66569735-66569754 | Msa0696610:CDS | 40.0% | |
| GAAAACTCTTCTGCAGAATC+TGG | - | chr4_4:66569790-66569809 | Msa0696610:CDS | 40.0% | |
| TCTCACAGTGAACTCTTATG+AGG | + | chr4_4:66569873-66569892 | None:intergenic | 40.0% | |
| GTGCAATTTGCAGATGGATA+TGG | - | chr4_4:66570186-66570205 | Msa0696610:intron | 40.0% | |
| AAGACGTAAAAACTGAGCGT+AGG | + | chr4_4:66570246-66570265 | None:intergenic | 40.0% | |
| ACTATATGTCTTACCTGCTC+AGG | + | chr4_4:66568714-66568733 | None:intergenic | 40.0% | |
| CACTGACGATGAAGAAATGA+AGG | + | chr4_4:66568946-66568965 | None:intergenic | 40.0% | |
| CTTCATTTCTTCATCGTCAG+TGG | - | chr4_4:66568944-66568963 | Msa0696610:CDS | 40.0% | |
| TCTCCAAAAGCAGTACCTAT+TGG | + | chr4_4:66569003-66569022 | None:intergenic | 40.0% | |
| !! | GAAGTTCTAGGGTTGAAGTT+TGG | + | chr4_4:66569054-66569073 | None:intergenic | 40.0% |
| CTTCAACCCTAGAACTTCAA+TGG | - | chr4_4:66569056-66569075 | Msa0696610:CDS | 40.0% | |
| GCAGTTTCCATTGAAGTTCT+AGG | + | chr4_4:66569066-66569085 | None:intergenic | 40.0% | |
| AAGCCTAAGGATGAGATGAT+TGG | - | chr4_4:66569171-66569190 | Msa0696610:CDS | 40.0% | |
| GAACCAATCATCTCATCCTT+AGG | + | chr4_4:66569177-66569196 | None:intergenic | 40.0% | |
| GATTTCTCAAGGAACCTTTG+AGG | - | chr4_4:66569224-66569243 | Msa0696610:CDS | 40.0% | |
| ! | TCAGCTACTATATGGTCTTG+AGG | + | chr4_4:66569285-66569304 | None:intergenic | 40.0% |
| ! | CTTTTGTAGTCCAGGAACAA+GGG | + | chr4_4:66569355-66569374 | None:intergenic | 40.0% |
| TTATGATCTCTGCCTAATGC+AGG | - | chr4_4:66569469-66569488 | Msa0696610:intron | 40.0% | |
| ATTGTGCTACGACTAACAGA+TGG | - | chr4_4:66569624-66569643 | Msa0696610:CDS | 40.0% | |
| GAAATTGCAAGAGAAGGTGA+AGG | - | chr4_4:66569687-66569706 | Msa0696610:CDS | 40.0% | |
| GAAAAACGTGGAATTTGTGG+TGG | - | chr4_4:66569735-66569754 | Msa0696610:CDS | 40.0% | |
| GAAAACTCTTCTGCAGAATC+TGG | - | chr4_4:66569790-66569809 | Msa0696610:CDS | 40.0% | |
| TCTCACAGTGAACTCTTATG+AGG | + | chr4_4:66569873-66569892 | None:intergenic | 40.0% | |
| GTGCAATTTGCAGATGGATA+TGG | - | chr4_4:66570186-66570205 | Msa0696610:intron | 40.0% | |
| AAGACGTAAAAACTGAGCGT+AGG | + | chr4_4:66570246-66570265 | None:intergenic | 40.0% | |
| GATCTTGCAGGAAATGATGG+AGG | - | chr4_4:66568918-66568937 | Msa0696610:intron | 45.0% | |
| GAGTCTAACTCACTGCCAAT+AGG | - | chr4_4:66568985-66569004 | Msa0696610:CDS | 45.0% | |
| !! | CTGCCAATAGGTACTGCTTT+TGG | - | chr4_4:66568997-66569016 | Msa0696610:CDS | 45.0% |
| !! | AGGAACCTTTGAGGCCAAAA+AGG | - | chr4_4:66569233-66569252 | Msa0696610:CDS | 45.0% |
| !! | TGCTACCTTTTTGGCCTCAA+AGG | + | chr4_4:66569241-66569260 | None:intergenic | 45.0% |
| !! | AGGACGTGTTGCTACCTTTT+TGG | + | chr4_4:66569250-66569269 | None:intergenic | 45.0% |
| TCTTGAGGAAGAGAGAGCTT+AGG | + | chr4_4:66569270-66569289 | None:intergenic | 45.0% | |
| ! | CCTTTTGTAGTCCAGGAACA+AGG | + | chr4_4:66569356-66569375 | None:intergenic | 45.0% |
| CCTTGTTCCTGGACTACAAA+AGG | - | chr4_4:66569353-66569372 | Msa0696610:intron | 45.0% | |
| AGAGAAGGTGAAGGTTCTTG+AGG | - | chr4_4:66569696-66569715 | Msa0696610:CDS | 45.0% | |
| AACTCTTCTGCAGAATCTGG+TGG | - | chr4_4:66569793-66569812 | Msa0696610:CDS | 45.0% | |
| ! | GGAATTTTGCATGACGGTGA+AGG | - | chr4_4:66570207-66570226 | Msa0696610:intron | 45.0% |
| GATCTTGCAGGAAATGATGG+AGG | - | chr4_4:66568918-66568937 | Msa0696610:intron | 45.0% | |
| GAGTCTAACTCACTGCCAAT+AGG | - | chr4_4:66568985-66569004 | Msa0696610:CDS | 45.0% | |
| !! | CTGCCAATAGGTACTGCTTT+TGG | - | chr4_4:66568997-66569016 | Msa0696610:CDS | 45.0% |
| !! | AGGAACCTTTGAGGCCAAAA+AGG | - | chr4_4:66569233-66569252 | Msa0696610:CDS | 45.0% |
| !! | TGCTACCTTTTTGGCCTCAA+AGG | + | chr4_4:66569241-66569260 | None:intergenic | 45.0% |
| !! | AGGACGTGTTGCTACCTTTT+TGG | + | chr4_4:66569250-66569269 | None:intergenic | 45.0% |
| TCTTGAGGAAGAGAGAGCTT+AGG | + | chr4_4:66569270-66569289 | None:intergenic | 45.0% | |
| ! | CCTTTTGTAGTCCAGGAACA+AGG | + | chr4_4:66569356-66569375 | None:intergenic | 45.0% |
| CCTTGTTCCTGGACTACAAA+AGG | - | chr4_4:66569353-66569372 | Msa0696610:intron | 45.0% | |
| AGAGAAGGTGAAGGTTCTTG+AGG | - | chr4_4:66569696-66569715 | Msa0696610:CDS | 45.0% | |
| AACTCTTCTGCAGAATCTGG+TGG | - | chr4_4:66569793-66569812 | Msa0696610:CDS | 45.0% | |
| ! | GGAATTTTGCATGACGGTGA+AGG | - | chr4_4:66570207-66570226 | Msa0696610:intron | 45.0% |
| TATCAGAGGGTTTCCTGAGC+AGG | - | chr4_4:66568698-66568717 | Msa0696610:CDS | 50.0% | |
| ! | GTTGGGATTGGTGAAGCCTA+AGG | - | chr4_4:66569158-66569177 | Msa0696610:CDS | 50.0% |
| CAGATAGAGCAATGAAGCGC+TGG | + | chr4_4:66569332-66569351 | None:intergenic | 50.0% | |
| GAAGGTGAAGGTTCTTGAGG+AGG | - | chr4_4:66569699-66569718 | Msa0696610:CDS | 50.0% | |
| TCTGGCAGTTCCTCGTCAAA+GGG | + | chr4_4:66569820-66569839 | None:intergenic | 50.0% | |
| TTCTGGCAGTTCCTCGTCAA+AGG | + | chr4_4:66569821-66569840 | None:intergenic | 50.0% | |
| TATCAGAGGGTTTCCTGAGC+AGG | - | chr4_4:66568698-66568717 | Msa0696610:CDS | 50.0% | |
| ! | GTTGGGATTGGTGAAGCCTA+AGG | - | chr4_4:66569158-66569177 | Msa0696610:CDS | 50.0% |
| CAGATAGAGCAATGAAGCGC+TGG | + | chr4_4:66569332-66569351 | None:intergenic | 50.0% | |
| GAAGGTGAAGGTTCTTGAGG+AGG | - | chr4_4:66569699-66569718 | Msa0696610:CDS | 50.0% | |
| TCTGGCAGTTCCTCGTCAAA+GGG | + | chr4_4:66569820-66569839 | None:intergenic | 50.0% | |
| TTCTGGCAGTTCCTCGTCAA+AGG | + | chr4_4:66569821-66569840 | None:intergenic | 50.0% | |
| GCTCTATCTGCCCTTGTTCC+TGG | - | chr4_4:66569342-66569361 | Msa0696610:intron | 55.0% | |
| ATCTGGTGGTCCCTTTGACG+AGG | - | chr4_4:66569807-66569826 | Msa0696610:CDS | 55.0% | |
| GCTCTATCTGCCCTTGTTCC+TGG | - | chr4_4:66569342-66569361 | Msa0696610:intron | 55.0% | |
| ATCTGGTGGTCCCTTTGACG+AGG | - | chr4_4:66569807-66569826 | Msa0696610:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 66568681 | 66570273 | 66568681 | ID=Msa0696610;Name=Msa0696610 |
| chr4_4 | mRNA | 66568681 | 66570273 | 66568681 | ID=Msa0696610-mRNA-1;Parent=Msa0696610;Name=Msa0696610-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|4|0|309 |
| chr4_4 | exon | 66570235 | 66570273 | 66570235 | ID=Msa0696610-mRNA-1:exon:19361;Parent=Msa0696610-mRNA-1 |
| chr4_4 | exon | 66569580 | 66570026 | 66569580 | ID=Msa0696610-mRNA-1:exon:19360;Parent=Msa0696610-mRNA-1 |
| chr4_4 | exon | 66568943 | 66569311 | 66568943 | ID=Msa0696610-mRNA-1:exon:19359;Parent=Msa0696610-mRNA-1 |
| chr4_4 | exon | 66568681 | 66568755 | 66568681 | ID=Msa0696610-mRNA-1:exon:19358;Parent=Msa0696610-mRNA-1 |
| chr4_4 | CDS | 66570235 | 66570273 | 66570235 | ID=Msa0696610-mRNA-1:cds;Parent=Msa0696610-mRNA-1 |
| chr4_4 | CDS | 66569580 | 66570026 | 66569580 | ID=Msa0696610-mRNA-1:cds;Parent=Msa0696610-mRNA-1 |
| chr4_4 | CDS | 66568943 | 66569311 | 66568943 | ID=Msa0696610-mRNA-1:cds;Parent=Msa0696610-mRNA-1 |
| chr4_4 | CDS | 66568681 | 66568755 | 66568681 | ID=Msa0696610-mRNA-1:cds;Parent=Msa0696610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
