AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0696930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0696930 MtrunA17_Chr4g0049541 96.703 91 3 0 1 91 1 91 1.26e-60 184
Msa0696930 MtrunA17_Chr2g0279821 75.281 89 22 0 1 89 1 89 1.99e-44 143
Msa0696930 MtrunA17_Chr5g0411691 72.527 91 24 1 1 91 1 90 9.17e-42 136
Msa0696930 MtrunA17_Chr5g0427921 78.333 60 13 0 1 60 1 60 2.88e-30 102
Msa0696930 MtrunA17_Chr3g0077501 63.158 76 28 0 1 76 1 76 3.92e-30 106
Msa0696930 MtrunA17_Chr4g0020221 60.759 79 31 0 1 79 1 79 5.03e-30 107
Msa0696930 MtrunA17_Chr5g0427401 62.338 77 27 1 1 77 1 75 8.11e-30 105
Msa0696930 MtrunA17_Chr4g0049901 57.778 90 38 0 1 90 27 116 1.41e-29 105
Msa0696930 MtrunA17_Chr8g0380021 60.759 79 31 0 1 79 17 95 1.04e-28 103
Msa0696930 MtrunA17_Chr3g0097101 64.789 71 25 0 1 71 16 86 1.34e-28 102
Msa0696930 MtrunA17_Chr5g0412461 55.682 88 39 0 1 88 1 88 1.39e-28 102
Msa0696930 MtrunA17_Chr5g0412271 55.682 88 39 0 1 88 1 88 1.81e-28 102
Msa0696930 MtrunA17_Chr2g0284911 62.667 75 28 0 1 75 16 90 6.05e-28 101
Msa0696930 MtrunA17_Chr7g0246431 66.197 71 24 0 1 71 1 71 9.95e-28 99.8
Msa0696930 MtrunA17_Chr8g0351041 66.667 69 23 0 1 69 1 69 6.46e-27 96.7
Msa0696930 MtrunA17_Chr1g0164791 64.384 73 24 1 1 71 1 73 1.53e-26 97.4
Msa0696930 MtrunA17_Chr1g0173161 66.129 62 21 0 1 62 1 62 1.68e-26 93.2
Msa0696930 MtrunA17_Chr4g0057151 60.000 75 30 0 1 75 1 75 2.00e-26 96.3
Msa0696930 MtrunA17_Chr7g0220121 59.722 72 28 1 1 71 1 72 3.16e-26 97.1
Msa0696930 MtrunA17_Chr8g0351031 65.217 69 24 0 1 69 1 69 7.32e-26 95.5
Msa0696930 MtrunA17_Chr4g0018421 60.274 73 28 1 1 72 1 73 8.07e-26 94.7
Msa0696930 MtrunA17_Chr8g0351051 56.098 82 32 1 1 78 1 82 8.42e-26 95.9
Msa0696930 MtrunA17_Chr5g0420091 54.444 90 33 3 1 85 1 87 1.44e-25 94.4
Msa0696930 MtrunA17_Chr4g0061691 56.944 72 30 1 1 71 1 72 2.32e-25 94.4
Msa0696930 MtrunA17_Chr1g0204111 59.420 69 28 0 1 69 17 85 4.49e-25 94.0
Msa0696930 MtrunA17_Chr4g0061671 48.421 95 45 2 1 91 1 95 4.88e-25 92.4
Msa0696930 MtrunA17_Chr8g0366231 58.333 72 29 1 1 71 1 72 8.18e-25 93.2
Msa0696930 MtrunA17_Chr6g0474371 61.429 70 26 1 1 69 1 70 1.11e-24 91.7
Msa0696930 MtrunA17_Chr6g0455511 52.273 88 41 1 1 87 1 88 1.15e-24 92.8
Msa0696930 MtrunA17_Chr3g0122251 61.111 72 27 1 1 71 1 72 1.72e-24 92.4
Msa0696930 MtrunA17_Chr5g0420081 56.944 72 30 1 1 71 1 72 2.51e-24 91.7
Msa0696930 MtrunA17_Chr7g0220111 51.136 88 42 1 1 87 1 88 3.07e-24 91.7
Msa0696930 MtrunA17_Chr3g0125241 54.795 73 31 1 1 71 26 98 4.99e-24 90.1
Msa0696930 MtrunA17_Chr2g0308251 56.522 69 30 0 1 69 1 69 7.03e-24 86.7
Msa0696930 MtrunA17_Chr3g0142191 50.549 91 38 2 1 84 1 91 9.62e-24 90.1
Msa0696930 MtrunA17_Chr7g0246381 63.934 61 22 0 1 61 1 61 1.05e-23 85.5
Msa0696930 MtrunA17_Chr5g0404951 54.545 77 33 1 1 75 1 77 5.88e-23 88.2
Msa0696930 MtrunA17_Chr1g0159661 52.055 73 33 1 1 71 1 73 3.61e-22 84.7
Msa0696930 MtrunA17_Chr8g0377561 62.069 58 22 0 1 58 1 58 3.85e-22 82.4
Msa0696930 MtrunA17_Chr3g0134451 50.617 81 39 1 1 80 1 81 1.81e-19 80.1
Msa0696930 MtrunA17_Chr5g0425191 62.069 58 22 0 1 58 1 58 2.38e-19 75.5
Msa0696930 MtrunA17_Chr4g0044071 58.621 58 24 0 1 58 1 58 9.99e-19 74.3
Msa0696930 MtrunA17_Chr4g0052081 47.826 69 36 0 1 69 1 69 2.03e-18 75.1
Msa0696930 MtrunA17_Chr1g0166611 66.667 48 16 0 13 60 17 64 2.45e-18 73.9
Msa0696930 MtrunA17_Chr3g0099421 51.471 68 33 0 2 69 34 101 3.36e-18 76.3
Msa0696930 MtrunA17_Chr5g0419601 47.945 73 38 0 1 73 8 80 4.30e-18 75.5
Msa0696930 MtrunA17_Chr8g0357771 47.826 69 36 0 1 69 1 69 5.14e-18 73.9
Msa0696930 MtrunA17_Chr1g0175611 48.611 72 37 0 1 72 1 72 8.00e-18 73.2
Msa0696930 MtrunA17_Chr4g0052061 47.826 69 36 0 1 69 1 69 9.22e-18 72.8
Msa0696930 MtrunA17_Chr2g0317481 41.772 79 46 0 2 80 9 87 1.26e-17 74.3
Msa0696930 MtrunA17_Chr2g0317451 41.772 79 46 0 2 80 9 87 1.27e-17 74.3
Msa0696930 MtrunA17_Chr1g0208561 42.308 78 45 0 2 79 9 86 1.69e-17 73.6
Msa0696930 MtrunA17_Chr2g0292791 48.529 68 35 0 2 69 9 76 2.28e-17 73.6
Msa0696930 MtrunA17_Chr3g0089141 42.308 78 45 0 2 79 9 86 2.32e-17 73.2
Msa0696930 MtrunA17_Chr1g0180591 46.377 69 37 0 1 69 1 69 2.60e-17 72.4
Msa0696930 MtrunA17_Chr2g0325971 45.833 72 39 0 2 73 9 80 3.28e-17 72.8
Msa0696930 MtrunA17_Chr1g0206701 47.059 68 36 0 2 69 9 76 3.66e-17 73.2
Msa0696930 MtrunA17_Chr8g0355091 47.059 68 36 0 2 69 9 76 3.74e-17 72.8
Msa0696930 MtrunA17_Chr8g0376821 47.826 69 36 0 1 69 1 69 3.84e-17 72.0
Msa0696930 MtrunA17_Chr3g0099411 47.059 68 36 0 2 69 9 76 3.98e-17 72.4
Msa0696930 MtrunA17_Chr5g0422421 48.529 68 35 0 2 69 9 76 5.18e-17 72.4
Msa0696930 MtrunA17_Chr1g0206721 47.059 68 36 0 2 69 9 76 5.46e-17 72.4
Msa0696930 MtrunA17_Chr1g0169761 47.826 69 36 0 1 69 1 69 8.07e-17 70.9
Msa0696930 MtrunA17_Chr1g0188671 45.588 68 37 0 2 69 47 114 1.33e-16 72.0
Msa0696930 MtrunA17_Chr1g0206991 47.059 68 36 0 2 69 9 76 1.35e-16 70.5
Msa0696930 MtrunA17_Chr1g0149391 47.059 68 36 0 2 69 9 76 1.57e-16 71.2
Msa0696930 MtrunA17_Chr3g0119901 38.889 90 44 1 1 79 8 97 1.61e-16 70.9
Msa0696930 MtrunA17_Chr1g0187361 47.059 68 36 0 2 69 9 76 1.78e-16 71.2
Msa0696930 MtrunA17_Chr5g0422941 45.588 68 37 0 2 69 9 76 2.02e-16 70.9
Msa0696930 MtrunA17_Chr1g0175601 47.826 69 36 0 1 69 1 69 2.81e-16 69.7
Msa0696930 MtrunA17_Chr4g0074101 44.928 69 38 0 1 69 1 69 3.40e-16 69.7
Msa0696930 MtrunA17_Chr1g0208581 43.056 72 41 0 2 73 9 80 3.76e-16 70.1
Msa0696930 MtrunA17_Chr2g0333981 44.928 69 38 0 1 69 11 79 4.08e-16 68.9
Msa0696930 MtrunA17_Chr3g0085241 36.364 99 52 1 1 88 40 138 9.23e-16 69.3
Msa0696930 MtrunA17_Chr8g0379021 44.118 68 38 0 2 69 12 79 1.11e-15 68.2
Msa0696930 MtrunA17_Chr8g0356071 43.478 69 39 0 1 69 1 69 1.63e-15 67.4
Msa0696930 MtrunA17_Chr4g0060841 45.946 74 38 1 1 72 1 74 2.76e-15 68.9
Msa0696930 MtrunA17_Chr4g0018951 47.273 55 29 0 15 69 25 79 5.38e-15 65.9
Msa0696930 MtrunA17_Chr2g0300441 37.363 91 44 2 2 79 7 97 5.46e-15 67.4
Msa0696930 MtrunA17_Chr5g0417661 54.717 53 24 0 1 53 56 108 1.58e-14 63.9
Msa0696930 MtrunA17_Chr3g0089151 39.706 68 41 0 2 69 9 76 3.09e-14 63.2
Msa0696930 MtrunA17_Chr3g0111841 45.000 60 33 0 7 66 1 60 4.62e-14 61.2
Msa0696930 MtrunA17_Chr2g0300421 38.462 78 48 0 2 79 9 86 1.12e-13 62.8
Msa0696930 MtrunA17_Chr1g0187351 44.068 59 33 0 11 69 1 59 2.48e-13 59.3
Msa0696930 MtrunA17_Chr1g0206691 44.068 59 33 0 11 69 1 59 2.95e-13 62.4
Msa0696930 MtrunA17_Chr4g0071601 46.377 69 37 0 1 69 11 79 9.26e-13 60.5
Msa0696930 MtrunA17_Chr6g0449851 52.941 51 24 0 1 51 1 51 6.11e-12 59.7
Msa0696930 MtrunA17_Chr6g0457851 50.980 51 25 0 1 51 11 61 1.38e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0696930 AT4G37940.3 70.330 91 27 0 1 91 1 91 9.21e-42 135
Msa0696930 AT2G14210.1 70.652 92 26 1 1 91 1 92 2.13e-41 135
Msa0696930 AT2G14210.2 70.652 92 26 1 1 91 1 92 2.83e-41 135
Msa0696930 AT4G37940.4 70.330 91 27 0 1 91 1 91 4.99e-41 134
Msa0696930 AT4G37940.1 70.330 91 27 0 1 91 1 91 5.09e-41 134
Msa0696930 AT3G57230.2 64.045 89 32 0 1 89 1 89 1.05e-37 123
Msa0696930 AT2G22630.1 63.736 91 33 0 1 91 1 91 8.15e-37 124
Msa0696930 AT2G22630.2 63.736 91 33 0 1 91 1 91 8.15e-37 124
Msa0696930 AT3G57230.1 64.045 89 32 0 1 89 1 89 3.52e-36 122
Msa0696930 AT3G57230.4 64.045 89 32 0 1 89 1 89 3.52e-36 122
Msa0696930 AT5G62165.14 64.474 76 27 0 1 76 1 76 1.37e-30 104
Msa0696930 AT2G22540.3 59.091 88 36 0 1 88 1 88 1.50e-30 108
Msa0696930 AT2G22540.1 59.091 88 36 0 1 88 1 88 1.50e-30 108
Msa0696930 AT5G62165.17 64.474 76 27 0 1 76 1 76 3.09e-30 105
Msa0696930 AT5G62165.12 64.474 76 27 0 1 76 1 76 3.09e-30 105
Msa0696930 AT5G62165.11 64.474 76 27 0 1 76 1 76 3.09e-30 105
Msa0696930 AT5G62165.6 64.474 76 27 0 1 76 1 76 5.81e-30 104
Msa0696930 AT5G62165.9 64.474 76 27 0 1 76 1 76 5.81e-30 104
Msa0696930 AT5G62165.7 64.474 76 27 0 1 76 1 76 5.81e-30 104
Msa0696930 AT5G62165.8 64.474 76 27 0 1 76 1 76 5.81e-30 104
Msa0696930 AT5G62165.13 64.474 76 27 0 1 76 1 76 5.81e-30 104
Msa0696930 AT3G57390.3 68.116 69 22 0 1 69 1 69 1.11e-29 105
Msa0696930 AT5G62165.10 64.474 76 27 0 1 76 1 76 1.13e-29 104
Msa0696930 AT5G62165.4 64.474 76 27 0 1 76 1 76 1.13e-29 104
Msa0696930 AT5G62165.3 64.474 76 27 0 1 76 1 76 1.22e-29 105
Msa0696930 AT5G62165.1 64.474 76 27 0 1 76 1 76 1.22e-29 105
Msa0696930 AT5G62165.2 64.474 76 27 0 1 76 1 76 1.22e-29 105
Msa0696930 AT4G09960.2 64.000 75 27 0 1 75 1 75 1.70e-29 104
Msa0696930 AT3G57390.1 68.116 69 22 0 1 69 1 69 2.12e-29 105
Msa0696930 AT4G09960.1 64.000 75 27 0 1 75 1 75 2.37e-29 104
Msa0696930 AT4G09960.6 64.000 75 27 0 1 75 2 76 2.40e-29 104
Msa0696930 AT4G09960.5 64.000 75 27 0 1 75 11 85 3.36e-29 104
Msa0696930 AT5G51870.2 57.647 85 36 0 1 85 1 85 3.92e-29 102
Msa0696930 AT4G09960.3 64.000 75 27 0 1 75 27 101 4.93e-29 104
Msa0696930 AT4G18960.1 62.667 75 28 0 2 76 18 92 5.93e-29 104
Msa0696930 AT2G42830.2 58.537 82 31 1 1 82 16 94 7.05e-29 103
Msa0696930 AT2G42830.1 58.537 82 31 1 1 82 16 94 7.45e-29 103
Msa0696930 AT3G58780.1 58.537 82 31 1 1 82 16 94 7.69e-29 103
Msa0696930 AT5G51870.5 57.647 85 36 0 1 85 24 108 8.16e-29 102
Msa0696930 AT5G51870.1 57.647 85 36 0 1 85 1 85 8.98e-29 102
Msa0696930 AT3G58780.5 58.537 82 31 1 1 82 22 100 9.19e-29 103
Msa0696930 AT5G51870.4 57.647 85 36 0 1 85 1 85 1.25e-28 102
Msa0696930 AT4G09960.4 64.000 75 27 0 1 75 96 170 1.59e-28 104
Msa0696930 AT5G51870.3 57.647 85 36 0 1 85 11 95 1.64e-28 102
Msa0696930 AT3G58780.4 58.537 82 31 1 1 82 16 94 1.76e-28 103
Msa0696930 AT2G45660.2 64.000 75 27 0 1 75 1 75 2.72e-28 100
Msa0696930 AT4G22950.2 52.688 93 34 1 1 83 1 93 8.47e-28 99.4
Msa0696930 AT2G45660.1 64.000 75 27 0 1 75 1 75 1.03e-27 100
Msa0696930 AT2G45650.1 63.380 71 26 0 1 71 1 71 1.64e-27 100
Msa0696930 AT5G13790.2 63.768 69 25 0 1 69 1 69 1.88e-27 100
Msa0696930 AT5G13790.1 63.768 69 25 0 1 69 1 69 1.97e-27 100
Msa0696930 AT4G22950.3 52.688 93 34 1 1 83 1 93 3.85e-27 99.0
Msa0696930 AT4G22950.1 52.688 93 34 1 1 83 1 93 3.85e-27 99.0
Msa0696930 AT4G24540.1 53.659 82 38 0 1 82 1 82 4.25e-27 99.0
Msa0696930 AT2G22540.2 56.818 88 33 1 1 88 1 83 1.40e-26 97.8
Msa0696930 AT4G11880.2 61.842 76 28 1 1 75 1 76 2.50e-26 95.9
Msa0696930 AT4G11880.3 61.842 76 28 1 1 75 1 76 2.50e-26 95.9
Msa0696930 AT4G11880.4 61.842 76 28 1 1 75 1 76 3.73e-26 96.3
Msa0696930 AT4G11880.1 61.842 76 28 1 1 75 1 76 3.73e-26 96.3
Msa0696930 AT5G51860.2 63.768 69 25 0 1 69 1 69 7.98e-26 95.1
Msa0696930 AT5G23260.3 60.241 83 27 3 1 77 1 83 8.00e-26 95.9
Msa0696930 AT5G23260.2 60.241 83 27 3 1 77 1 83 9.17e-26 96.3
Msa0696930 AT5G51860.1 63.768 69 25 0 1 69 1 69 1.05e-25 95.1
Msa0696930 AT5G23260.4 60.241 83 27 3 1 77 17 99 1.25e-25 96.3
Msa0696930 AT5G23260.1 60.241 83 27 3 1 77 17 99 1.27e-25 95.9
Msa0696930 AT1G26310.1 54.217 83 37 1 1 82 1 83 2.51e-25 95.1
Msa0696930 AT3G30260.1 52.326 86 40 1 1 85 1 86 3.25e-25 94.7
Msa0696930 AT5G60910.1 58.333 72 29 1 1 71 1 72 4.49e-25 94.0
Msa0696930 AT1G24260.3 54.118 85 35 2 1 84 1 82 5.85e-25 93.6
Msa0696930 AT1G24260.1 54.118 85 35 2 1 84 1 82 7.52e-25 93.6
Msa0696930 AT1G24260.2 54.118 85 35 2 1 84 1 82 7.67e-25 93.6
Msa0696930 AT5G20240.2 58.108 74 29 1 1 72 1 74 9.05e-25 90.9
Msa0696930 AT1G69120.2 50.602 83 40 1 1 82 1 83 1.90e-24 92.4
Msa0696930 AT5G20240.1 58.108 74 29 1 1 72 1 74 2.46e-24 91.3
Msa0696930 AT1G69120.1 50.602 83 40 1 1 82 1 83 3.61e-24 92.0
Msa0696930 AT3G61120.1 59.420 69 28 0 1 69 1 69 3.94e-24 91.7
Msa0696930 AT3G02310.2 59.722 72 28 1 1 71 1 72 4.42e-24 90.5
Msa0696930 AT3G58780.2 54.878 82 27 2 1 82 16 87 5.07e-24 91.3
Msa0696930 AT2G03710.3 50.588 85 37 2 1 83 1 82 5.30e-24 90.1
Msa0696930 AT5G15800.1 59.722 72 28 1 1 71 1 72 7.63e-24 91.3
Msa0696930 AT3G58780.3 64.516 62 22 0 1 62 16 77 9.52e-24 91.3
Msa0696930 AT5G15800.2 59.722 72 28 1 1 71 1 72 1.03e-23 90.9
Msa0696930 AT3G02310.1 59.722 72 28 1 1 71 1 72 1.43e-23 90.5
Msa0696930 AT2G03710.2 49.438 89 40 2 1 87 1 86 1.92e-23 90.1
Msa0696930 AT2G03710.1 49.438 89 40 2 1 87 1 86 2.18e-23 90.1
Msa0696930 AT5G10140.2 51.220 82 39 1 1 81 1 82 3.31e-23 87.4
Msa0696930 AT1G71692.1 55.556 72 31 1 1 71 1 72 4.00e-23 88.6
Msa0696930 AT5G10140.4 51.220 82 39 1 1 81 1 82 4.41e-23 87.4
Msa0696930 AT5G10140.3 51.220 82 39 1 1 81 1 82 5.32e-23 87.4
Msa0696930 AT5G65060.2 48.352 91 46 1 1 90 1 91 5.74e-23 87.4
Msa0696930 AT5G10140.1 51.220 82 39 1 1 81 1 82 5.78e-23 87.8
Msa0696930 AT5G65060.3 48.352 91 46 1 1 90 1 91 7.31e-23 87.4
Msa0696930 AT5G65060.1 48.352 91 46 1 1 90 1 91 7.73e-23 87.4
Msa0696930 AT5G65070.4 51.220 82 39 1 1 81 1 82 1.28e-22 85.5
Msa0696930 AT3G54340.1 63.934 61 22 0 1 61 1 61 1.69e-22 87.4
Msa0696930 AT5G65070.1 51.220 82 39 1 1 81 1 82 3.06e-22 85.9
Msa0696930 AT5G65070.5 57.143 70 29 1 1 69 1 70 1.23e-21 84.3
Msa0696930 AT5G65070.2 57.143 70 29 1 1 69 1 70 1.25e-21 85.1
Msa0696930 AT5G65080.3 52.809 89 35 3 1 87 8 91 1.33e-21 84.0
Msa0696930 AT5G65050.2 50.000 82 40 1 1 81 1 82 1.43e-21 83.6
Msa0696930 AT5G65050.5 50.000 82 40 1 1 81 1 82 2.14e-21 83.2
Msa0696930 AT5G65050.1 50.000 82 40 1 1 81 1 82 2.35e-21 83.2
Msa0696930 AT5G65050.3 50.000 82 40 1 1 81 1 82 2.56e-21 83.2
Msa0696930 AT1G31140.2 53.947 76 33 1 1 74 1 76 1.07e-20 82.0
Msa0696930 AT1G31140.1 53.947 76 33 1 1 74 1 76 1.13e-20 82.0
Msa0696930 AT5G65070.3 61.017 59 23 0 1 59 1 59 5.59e-20 80.5
Msa0696930 AT2G34440.1 45.333 75 41 0 1 75 1 75 2.09e-19 77.8
Msa0696930 AT1G77980.1 54.286 70 31 1 1 69 1 70 7.62e-19 79.0
Msa0696930 AT5G65080.2 61.017 59 23 0 1 59 8 66 9.98e-19 77.0
Msa0696930 AT3G66656.1 44.928 69 38 0 1 69 1 69 5.45e-18 74.3
Msa0696930 AT2G24840.1 49.275 69 35 0 1 69 62 130 6.62e-18 75.9
Msa0696930 AT1G77080.11 51.220 82 39 1 1 81 1 82 1.63e-17 73.2
Msa0696930 AT1G77080.5 47.253 91 47 1 1 90 1 91 2.05e-17 72.8
Msa0696930 AT1G22130.1 48.750 80 40 1 1 79 1 80 2.25e-17 75.1
Msa0696930 AT1G77080.4 51.220 82 39 1 1 81 1 82 2.47e-17 73.2
Msa0696930 AT1G77080.8 51.220 82 39 1 1 81 1 82 4.38e-17 72.8
Msa0696930 AT1G72350.1 52.941 68 30 1 2 69 43 108 6.36e-17 72.4
Msa0696930 AT1G77950.3 48.571 70 35 1 1 69 1 70 1.49e-16 72.0
Msa0696930 AT1G77950.2 48.571 70 35 1 1 69 1 70 1.49e-16 72.0
Msa0696930 AT1G77950.1 48.571 70 35 1 1 69 1 70 1.49e-16 72.0
Msa0696930 AT1G77950.4 48.571 70 35 1 1 69 1 70 1.49e-16 72.0
Msa0696930 AT2G26320.1 45.070 71 37 1 1 69 17 87 5.79e-16 67.4
Msa0696930 AT1G77080.12 61.017 59 23 0 1 59 1 59 8.47e-16 68.2
Msa0696930 AT1G77080.2 61.017 59 23 0 1 59 1 59 1.60e-15 68.2
Msa0696930 AT5G60440.1 42.683 82 44 1 2 80 7 88 2.84e-15 68.9
Msa0696930 AT1G18750.1 44.595 74 39 1 1 72 1 74 5.70e-15 68.6
Msa0696930 AT1G18750.3 44.595 74 39 1 1 72 1 74 6.09e-15 68.6
Msa0696930 AT1G18750.4 44.595 74 39 1 1 72 1 74 6.42e-15 68.6
Msa0696930 AT4G36590.1 43.210 81 42 1 2 78 7 87 6.83e-15 67.4
Msa0696930 AT1G69540.1 56.604 53 23 0 1 53 1 53 1.78e-14 67.0
Msa0696930 AT3G04100.1 41.791 67 39 0 2 68 14 80 1.87e-14 65.9
Msa0696930 AT2G03060.3 45.946 74 38 1 1 72 1 74 1.98e-14 67.0
Msa0696930 AT2G03060.7 45.946 74 38 1 1 72 1 74 1.98e-14 67.0
Msa0696930 AT2G03060.1 45.946 74 38 1 1 72 1 74 1.98e-14 67.0
Msa0696930 AT1G69540.2 56.604 53 23 0 1 53 1 53 2.08e-14 67.0
Msa0696930 AT1G28460.1 47.059 68 36 0 2 69 8 75 2.44e-14 65.1
Msa0696930 AT2G03060.2 45.946 74 38 1 1 72 1 74 2.77e-14 66.6
Msa0696930 AT4G37435.1 45.714 70 37 1 1 69 1 70 3.83e-14 64.7
Msa0696930 AT1G29962.1 45.588 68 37 0 2 69 8 75 5.52e-14 63.9
Msa0696930 AT1G01530.1 41.791 67 39 0 1 67 6 72 7.22e-14 64.7
Msa0696930 AT1G47760.1 42.647 68 39 0 1 68 1 68 1.16e-13 63.2
Msa0696930 AT1G65360.1 34.177 79 52 0 1 79 6 84 2.86e-13 62.8
Msa0696930 AT1G28450.1 42.647 68 39 0 2 69 8 75 2.86e-11 57.0

Find 15 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATGACTATGCAAGTTCC+AGG 0.390086 4_4:-66943640 Msa0696930:intron
ACTTTCTCAAAGAGAAGAAA+AGG 0.421236 4_4:-66943743 Msa0696930:CDS
TCTTTGAGAAAGTCACTTGA+CGG 0.458185 4_4:+66943753 None:intergenic
TCAAGCAATGGATCCTACTT+TGG 0.468684 4_4:-66939988 Msa0696930:CDS
AACTTGTGCATCACAAAGAA+TGG 0.480043 4_4:+66943694 None:intergenic
ATTCTTTGTGATGCACAAGT+TGG 0.486752 4_4:-66943692 Msa0696930:CDS
GAGGAAAGATTGTGATTCGA+AGG 0.502771 4_4:-66943793 Msa0696930:CDS
ATTACCTTGAGTTCCAAAGT+AGG 0.526581 4_4:+66939975 None:intergenic
GGATCCTACTTTGGAACTCA+AGG 0.536262 4_4:-66939979 Msa0696930:intron
TAGGATCCATTGCTTGATGA+TGG 0.549650 4_4:+66939994 None:intergenic
GTCATAAAGCTTGTGAGTAG+AGG 0.558703 4_4:+66943655 None:intergenic
CTTTCTCAAAGAGAAGAAAA+GGG 0.568730 4_4:-66943742 Msa0696930:CDS
TAGTTAATTAAGATGGGGAG+AGG 0.586556 4_4:-66943812 None:intergenic
AGAGGACCATCATCAAGCAA+TGG 0.621274 4_4:-66940000 Msa0696930:CDS
GCGTTATAACAAGTTAGTAG+AGG 0.643614 4_4:-66940018 Msa0696930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATATTTATAAAAAAA+AGG + chr4_4:66942664-66942683 None:intergenic 0.0%
!!! AAAAAACTATTTATTTTTTG+AGG - chr4_4:66940203-66940222 Msa0696930:intron 10.0%
!!! AAAAACTATTTATTTTTTGA+GGG - chr4_4:66940204-66940223 Msa0696930:intron 10.0%
!! TGAACAAAAAATAAAAATAA+AGG - chr4_4:66941570-66941589 Msa0696930:intron 10.0%
!! CCTAAAAATAATTATAATAT+AGG + chr4_4:66942104-66942123 None:intergenic 10.0%
!!! CCTATATTATAATTATTTTT+AGG - chr4_4:66942101-66942120 Msa0696930:intron 10.0%
!!! TAATTATTTTACTAGTTTTT+TGG - chr4_4:66942449-66942468 Msa0696930:intron 10.0%
!!! AATTTCATAACTTTTTTTTT+TGG - chr4_4:66942534-66942553 Msa0696930:intron 10.0%
!!! TGTAAAAATCATTTTTGTAA+GGG + chr4_4:66940402-66940421 None:intergenic 15.0%
!!! ATGTAAAAATCATTTTTGTA+AGG + chr4_4:66940403-66940422 None:intergenic 15.0%
!! ATATGTATTTCAAAACTTAT+CGG - chr4_4:66940979-66940998 Msa0696930:intron 15.0%
!!! TTTTACATTGTTTTATTCTT+TGG + chr4_4:66941141-66941160 None:intergenic 15.0%
!! ATTATAATATAGGCAAAAAT+CGG + chr4_4:66942094-66942113 None:intergenic 15.0%
!! CTTATTTATGAGAATATTTA+AGG + chr4_4:66942137-66942156 None:intergenic 15.0%
!!! TCTTTAAAAAAACAAAGTTA+TGG + chr4_4:66942513-66942532 None:intergenic 15.0%
!! AAAAGTTACATAATAAGTTA+TGG + chr4_4:66942589-66942608 None:intergenic 15.0%
!!! ATATTATGTAACTTTTTAAG+AGG - chr4_4:66942621-66942640 Msa0696930:intron 15.0%
!! TAAAAAAAAGGAAAAGAAAA+AGG + chr4_4:66942652-66942671 None:intergenic 15.0%
!! ATTCATGATGATATATATAA+GGG + chr4_4:66943209-66943228 None:intergenic 15.0%
!!! AAAATTAGTTCTTATTGATC+AGG - chr4_4:66939973-66939992 Msa0696930:intron 20.0%
!!! AAATTAGTTCTTATTGATCA+GGG - chr4_4:66939974-66939993 Msa0696930:intron 20.0%
!! TTCAAAAAAAAATTGTGAGA+TGG - chr4_4:66940310-66940329 Msa0696930:intron 20.0%
!! AAAAAAAATCGCAAAACAAA+TGG - chr4_4:66940521-66940540 Msa0696930:intron 20.0%
!! AAAAAAATCGCAAAACAAAT+GGG - chr4_4:66940522-66940541 Msa0696930:intron 20.0%
!! TGTGATTGTATAACTTAAAT+AGG + chr4_4:66940741-66940760 None:intergenic 20.0%
!! TTTAATACATAGATATTCCA+TGG + chr4_4:66940770-66940789 None:intergenic 20.0%
!!! AAGTTTAAAGTATTTCTAAC+TGG - chr4_4:66941253-66941272 Msa0696930:intron 20.0%
!! TTTACAATACTAGGTTATAT+GGG - chr4_4:66941320-66941339 Msa0696930:intron 20.0%
!! TCAAATGTGTATGTATTATA+TGG - chr4_4:66942300-66942319 Msa0696930:intron 20.0%
!!! CAAAGTTATGGAATTTTTTT+AGG + chr4_4:66942501-66942520 None:intergenic 20.0%
!!! AATAAGTTATGGAATTTTCT+GGG + chr4_4:66942578-66942597 None:intergenic 20.0%
!!! TAATAAGTTATGGAATTTTC+TGG + chr4_4:66942579-66942598 None:intergenic 20.0%
!!! TTATGTAACTTTTTGTTTTG+AGG - chr4_4:66942596-66942615 Msa0696930:intron 20.0%
!! AAAGAAGTTACATTAAAAGA+TGG - chr4_4:66942719-66942738 Msa0696930:intron 20.0%
!! ATTTGTCTTACTATTTAGTA+GGG + chr4_4:66942856-66942875 None:intergenic 20.0%
!! TATTTGTCTTACTATTTAGT+AGG + chr4_4:66942857-66942876 None:intergenic 20.0%
!!! AAGACAAATAATGAAGTATT+TGG - chr4_4:66942867-66942886 Msa0696930:intron 20.0%
!! CATTCATGATGATATATATA+AGG + chr4_4:66943210-66943229 None:intergenic 20.0%
!!! CTAACCTTTTACAATTTTTT+TGG + chr4_4:66943236-66943255 None:intergenic 20.0%
!!! TGTATATATCCATAGATTTT+AGG - chr4_4:66943598-66943617 Msa0696930:intron 20.0%
!!! TTAATTTGTACAACTTGTAA+TGG - chr4_4:66943653-66943672 Msa0696930:CDS 20.0%
! ACAAATCGCAGTAAAATAAA+GGG + chr4_4:66939906-66939925 None:intergenic 25.0%
! ATTGTACACAATATATATGC+AGG + chr4_4:66940006-66940025 None:intergenic 25.0%
! TCTAGTGTTTACTATACTTA+CGG - chr4_4:66940125-66940144 Msa0696930:intron 25.0%
! AATAAAGTGAACAATTGTGA+TGG - chr4_4:66940282-66940301 Msa0696930:intron 25.0%
! ATGGAGAGAAAATAAAATGT+TGG - chr4_4:66940329-66940348 Msa0696930:intron 25.0%
! AAAAAATCGCAAAACAAATG+GGG - chr4_4:66940523-66940542 Msa0696930:intron 25.0%
! CATACACAATTACAAATTCT+CGG - chr4_4:66940586-66940605 Msa0696930:intron 25.0%
! CCTAACAATATTGATATTGT+CGG - chr4_4:66940635-66940654 Msa0696930:intron 25.0%
!!! GGTTTTTTGAGTATTTGAAT+GGG + chr4_4:66940816-66940835 None:intergenic 25.0%
!!! AGGTTTTTTGAGTATTTGAA+TGG + chr4_4:66940817-66940836 None:intergenic 25.0%
! AATTTGACTATTATTTGCTC+AGG - chr4_4:66940944-66940963 Msa0696930:intron 25.0%
!!! CAATATTTTTTTCTCTTCGT+TGG + chr4_4:66941041-66941060 None:intergenic 25.0%
! GAATACTGTAGAATATAACA+TGG - chr4_4:66941072-66941091 Msa0696930:intron 25.0%
! TTAAACTTTATCAGTTGTGT+GGG + chr4_4:66941241-66941260 None:intergenic 25.0%
! TTTAAACTTTATCAGTTGTG+TGG + chr4_4:66941242-66941261 None:intergenic 25.0%
!! TTTAAAGTATTTCTAACTGG+AGG - chr4_4:66941256-66941275 Msa0696930:intron 25.0%
! CATATAACCTAGTATTGTAA+AGG + chr4_4:66941321-66941340 None:intergenic 25.0%
! CTTTACAATACTAGGTTATA+TGG - chr4_4:66941319-66941338 Msa0696930:intron 25.0%
! TTGAACGAGATATTTATCTT+AGG - chr4_4:66941401-66941420 Msa0696930:intron 25.0%
! GAGATATTTATCTTAGGTAT+CGG - chr4_4:66941407-66941426 Msa0696930:intron 25.0%
!!! CTGTTAAGTATTGTGTTTTT+GGG - chr4_4:66941524-66941543 Msa0696930:intron 25.0%
!!! TGTTAAGTATTGTGTTTTTG+GGG - chr4_4:66941525-66941544 Msa0696930:intron 25.0%
! TGCACAAGATAAGTATTTAT+AGG - chr4_4:66941659-66941678 Msa0696930:intron 25.0%
! AACTGTTCTTATGTATCAAA+TGG - chr4_4:66941685-66941704 Msa0696930:intron 25.0%
! ATTCTTTCTATAGTATACTG+AGG + chr4_4:66941986-66942005 None:intergenic 25.0%
!!! TTTTTTTTTTGGTGCAAAAG+AGG - chr4_4:66942545-66942564 Msa0696930:intron 25.0%
!!! TTTTTTTTTGGTGCAAAAGA+GGG - chr4_4:66942546-66942565 Msa0696930:intron 25.0%
!! TGTACTTCATCACATTTTAT+GGG + chr4_4:66942768-66942787 None:intergenic 25.0%
!! TTGTACTTCATCACATTTTA+TGG + chr4_4:66942769-66942788 None:intergenic 25.0%
!!! TTTTTGAGTATCTTTTGAGA+GGG + chr4_4:66942806-66942825 None:intergenic 25.0%
!!! TTTTTTGAGTATCTTTTGAG+AGG + chr4_4:66942807-66942826 None:intergenic 25.0%
! TTTGTCTTACTATTTAGTAG+GGG + chr4_4:66942855-66942874 None:intergenic 25.0%
! AGTAATCACTGAAATAATTC+AGG + chr4_4:66942897-66942916 None:intergenic 25.0%
! TGAAACAAATAGATGAGATT+TGG - chr4_4:66943147-66943166 Msa0696930:intron 25.0%
! GATGCCAAAAAAATTGTAAA+AGG - chr4_4:66943229-66943248 Msa0696930:intron 25.0%
! ATCTAAATTAACACTAGTAG+TGG + chr4_4:66943376-66943395 None:intergenic 25.0%
! AATGGTTATATTTGTATCAG+TGG + chr4_4:66943421-66943440 None:intergenic 25.0%
! ACATTATAGCCTAAAATCTA+TGG + chr4_4:66943610-66943629 None:intergenic 25.0%
!! TAGATTTTAGGCTATAATGT+TGG - chr4_4:66943610-66943629 Msa0696930:intron 25.0%
!! AGATTTTAGGCTATAATGTT+GGG - chr4_4:66943611-66943630 Msa0696930:intron 25.0%
! ATTTGAATAATAACGTATGC+AGG + chr4_4:66943779-66943798 None:intergenic 25.0%
ACTTTCTCAAAGAGAAGAAA+AGG - chr4_4:66939742-66939761 Msa0696930:intron 30.0%
CTTTCTCAAAGAGAAGAAAA+GGG - chr4_4:66939743-66939762 Msa0696930:intron 30.0%
AAATGATTTGATCCTATACC+TGG + chr4_4:66939866-66939885 None:intergenic 30.0%
CACAAATCGCAGTAAAATAA+AGG + chr4_4:66939907-66939926 None:intergenic 30.0%
CAGTCTAGTAAAACTTTGAA+GGG + chr4_4:66940058-66940077 None:intergenic 30.0%
!!! ACTACTTATTTTTTGACTCC+CGG - chr4_4:66940235-66940254 Msa0696930:intron 30.0%
AAAATCATTGAAGATTGTCC+CGG + chr4_4:66940257-66940276 None:intergenic 30.0%
CCGACAATATCAATATTGTT+AGG + chr4_4:66940638-66940657 None:intergenic 30.0%
! TTGATATTGTCGGTTGAATT+AGG - chr4_4:66940645-66940664 Msa0696930:intron 30.0%
ATTAGGTCTTAGAGTCAAAT+TGG - chr4_4:66940662-66940681 Msa0696930:intron 30.0%
ATACAATCACAATTTCTCCA+TGG - chr4_4:66940750-66940769 Msa0696930:intron 30.0%
TGAATGGGAGAGTTATAAAT+AGG + chr4_4:66940801-66940820 None:intergenic 30.0%
GATAAATATCTCGTTCAACA+AGG + chr4_4:66941399-66941418 None:intergenic 30.0%
ATCGTAATCGTTTGAAGAAA+GGG + chr4_4:66941455-66941474 None:intergenic 30.0%
ACTTATGAACTAATAGCTGA+GGG + chr4_4:66941494-66941513 None:intergenic 30.0%
TACTTATGAACTAATAGCTG+AGG + chr4_4:66941495-66941514 None:intergenic 30.0%
!! GCTGTTAAGTATTGTGTTTT+TGG - chr4_4:66941523-66941542 Msa0696930:intron 30.0%
TATCTTGTGCAATTTCAGAA+AGG + chr4_4:66941650-66941669 None:intergenic 30.0%
AGCGAAGGAAAAAATTATTG+GGG + chr4_4:66942236-66942255 None:intergenic 30.0%
GAGCGAAGGAAAAAATTATT+GGG + chr4_4:66942237-66942256 None:intergenic 30.0%
AGAGCGAAGGAAAAAATTAT+TGG + chr4_4:66942238-66942257 None:intergenic 30.0%
! ACATACACATTTGAGATCTA+TGG + chr4_4:66942294-66942313 None:intergenic 30.0%
AAAACATTTAACACATAGCG+AGG + chr4_4:66942690-66942709 None:intergenic 30.0%
!! TTTTGAGTATCTTTTGAGAG+GGG + chr4_4:66942805-66942824 None:intergenic 30.0%
GAGTGAATTCAAATACTTTG+AGG - chr4_4:66942972-66942991 Msa0696930:intron 30.0%
TTGAGGTGAATTTCATTGTT+TGG - chr4_4:66942989-66943008 Msa0696930:intron 30.0%
TGAATTTCATTGTTTGGATG+AGG - chr4_4:66942995-66943014 Msa0696930:intron 30.0%
GAATTTCATTGTTTGGATGA+GGG - chr4_4:66942996-66943015 Msa0696930:intron 30.0%
TGAGGAAATGTAATGTTATG+AGG - chr4_4:66943034-66943053 Msa0696930:intron 30.0%
GAGGAAATGTAATGTTATGA+GGG - chr4_4:66943035-66943054 Msa0696930:intron 30.0%
TGTGTTTGAATGAGGTAATT+TGG + chr4_4:66943113-66943132 None:intergenic 30.0%
TGTACAACTTGTAATGGTTT+AGG - chr4_4:66943659-66943678 Msa0696930:CDS 30.0%
! TCTTTGAGAAAGTCACTTGA+CGG + chr4_4:66939735-66939754 None:intergenic 35.0%
AACTTGTGCATCACAAAGAA+TGG + chr4_4:66939794-66939813 None:intergenic 35.0%
ATTCTTTGTGATGCACAAGT+TGG - chr4_4:66939793-66939812 Msa0696930:intron 35.0%
TTTATGACTATGCAAGTTCC+AGG - chr4_4:66939845-66939864 Msa0696930:intron 35.0%
CGCAGTAAAATAAAGGGAAA+AGG + chr4_4:66939900-66939919 None:intergenic 35.0%
GCAGTCTAGTAAAACTTTGA+AGG + chr4_4:66940059-66940078 None:intergenic 35.0%
!!! CTACTTATTTTTTGACTCCC+GGG - chr4_4:66940236-66940255 Msa0696930:intron 35.0%
AAATCATTGAAGATTGTCCC+GGG + chr4_4:66940256-66940275 None:intergenic 35.0%
TGACTATTATTTGCTCAGGT+TGG - chr4_4:66940948-66940967 Msa0696930:intron 35.0%
GTATTTCAAAACTTATCGGC+TGG - chr4_4:66940983-66941002 Msa0696930:intron 35.0%
! TTTGAAGAGTATACATCCGA+TGG + chr4_4:66941200-66941219 None:intergenic 35.0%
GAAGATGGAGATCAGTATAT+AGG + chr4_4:66941299-66941318 None:intergenic 35.0%
CCTAGTATTGTAAAGGAAGA+TGG + chr4_4:66941314-66941333 None:intergenic 35.0%
CCATCTTCCTTTACAATACT+AGG - chr4_4:66941311-66941330 Msa0696930:intron 35.0%
! TTGGCTGAAATTGAAGCATT+TGG + chr4_4:66941353-66941372 None:intergenic 35.0%
! ATTGATATTCGTGTTGGTGT+TGG + chr4_4:66941372-66941391 None:intergenic 35.0%
AATATCTCGTTCAACAAGGT+CGG + chr4_4:66941395-66941414 None:intergenic 35.0%
TCGTAATCGTTTGAAGAAAG+GGG + chr4_4:66941454-66941473 None:intergenic 35.0%
CATCGTAATCGTTTGAAGAA+AGG + chr4_4:66941456-66941475 None:intergenic 35.0%
CCTTGATTGACTATTTGCAT+GGG - chr4_4:66941729-66941748 Msa0696930:intron 35.0%
! TAAATTTTCCCTCGTTGAAG+AGG - chr4_4:66941759-66941778 Msa0696930:intron 35.0%
GAAGACATCAAACTTAGTCA+AGG + chr4_4:66941955-66941974 None:intergenic 35.0%
GCGAAGGAAAAAATTATTGG+GGG + chr4_4:66942235-66942254 None:intergenic 35.0%
GGGAATGTAATGTAATGTTG+AGG - chr4_4:66943016-66943035 Msa0696930:intron 35.0%
GAGGGAATTCAAATACTTTG+AGG - chr4_4:66943053-66943072 Msa0696930:intron 35.0%
! CTTAAGAGTGTGTTTGAATG+AGG + chr4_4:66943121-66943140 None:intergenic 35.0%
CTCATTCAAACACACTCTTA+AGG - chr4_4:66943119-66943138 Msa0696930:intron 35.0%
GCGTTATAACAAGTTAGTAG+AGG - chr4_4:66943467-66943486 Msa0696930:intron 35.0%
ATTACCTTGAGTTCCAAAGT+AGG + chr4_4:66943513-66943532 None:intergenic 35.0%
TCAAGGTAATACAACCATGA+GGG - chr4_4:66943523-66943542 Msa0696930:intron 35.0%
ATAAATTTCACTTCCCCTCA+TGG + chr4_4:66943540-66943559 None:intergenic 35.0%
TGAATAATAACGTATGCAGG+TGG + chr4_4:66943776-66943795 None:intergenic 35.0%
GAGGAAAGATTGTGATTCGA+AGG - chr4_4:66939692-66939711 Msa0696930:intron 40.0%
GTCATAAAGCTTGTGAGTAG+AGG + chr4_4:66939833-66939852 None:intergenic 40.0%
ACTATGCAAGTTCCAGGTAT+AGG - chr4_4:66939851-66939870 Msa0696930:intron 40.0%
GTTAATACTTCGTCTAGCTG+AGG + chr4_4:66940557-66940576 None:intergenic 40.0%
TCGGATTCGAACTTTGATGA+AGG - chr4_4:66940605-66940624 Msa0696930:intron 40.0%
AGGTCTTAGAGTCAAATTGG+TGG - chr4_4:66940665-66940684 Msa0696930:intron 40.0%
GGTCTTAGAGTCAAATTGGT+GGG - chr4_4:66940666-66940685 Msa0696930:intron 40.0%
!! GCTTGCTATTAGGATTGTTG+AGG - chr4_4:66941011-66941030 Msa0696930:intron 40.0%
GCCTTGATTGACTATTTGCA+TGG - chr4_4:66941728-66941747 Msa0696930:intron 40.0%
CCCATGCAAATAGTCAATCA+AGG + chr4_4:66941732-66941751 None:intergenic 40.0%
AACTTCCCTTGAAACGTAAG+TGG - chr4_4:66941854-66941873 Msa0696930:intron 40.0%
TAAGTGGCCATCATTCCTTT+CGG - chr4_4:66941870-66941889 Msa0696930:intron 40.0%
ATGTAATGCCACTAACCGAA+AGG + chr4_4:66941888-66941907 None:intergenic 40.0%
GGTTAGTGGCATTACATATG+TGG - chr4_4:66941891-66941910 Msa0696930:intron 40.0%
TACATATGTGGAGTGCAAGT+TGG - chr4_4:66941903-66941922 Msa0696930:intron 40.0%
AGAATCGTTTGACCCTTGTT+TGG - chr4_4:66942001-66942020 Msa0696930:intron 40.0%
! GAATCGTTTGACCCTTGTTT+GGG - chr4_4:66942002-66942021 Msa0696930:intron 40.0%
TGACTTAAAACACAGAGCGA+AGG + chr4_4:66942251-66942270 None:intergenic 40.0%
CGAATTCGCAAAGAGAATCA+AGG + chr4_4:66942334-66942353 None:intergenic 40.0%
ACCACTTAACTTACACGCAT+TGG - chr4_4:66942364-66942383 Msa0696930:intron 40.0%
TCCAATGCGTGTAAGTTAAG+TGG + chr4_4:66942368-66942387 None:intergenic 40.0%
ACCCTTAGAGTGTGTTTAGA+TGG - chr4_4:66942920-66942939 Msa0696930:intron 40.0%
CCCATCTAAACACACTCTAA+GGG + chr4_4:66942924-66942943 None:intergenic 40.0%
CCCTTAGAGTGTGTTTAGAT+GGG - chr4_4:66942921-66942940 Msa0696930:intron 40.0%
CCTTAGAGTGTGTTTAGATG+GGG - chr4_4:66942922-66942941 Msa0696930:intron 40.0%
CTTAGAGTGTGTTTAGATGG+GGG - chr4_4:66942923-66942942 Msa0696930:intron 40.0%
! TTAGATGGGGGAATGTTTTG+AGG - chr4_4:66942935-66942954 Msa0696930:intron 40.0%
!! TAGATGGGGGAATGTTTTGA+GGG - chr4_4:66942936-66942955 Msa0696930:intron 40.0%
TGACTGCATGCTGCAAAAAA+TGG + chr4_4:66943439-66943458 None:intergenic 40.0%
TAGGATCCATTGCTTGATGA+TGG + chr4_4:66943494-66943513 None:intergenic 40.0%
TCAAGCAATGGATCCTACTT+TGG - chr4_4:66943497-66943516 Msa0696930:intron 40.0%
CTCAAGGTAATACAACCATG+AGG - chr4_4:66943522-66943541 Msa0696930:intron 40.0%
CAAGGTAATACAACCATGAG+GGG - chr4_4:66943524-66943543 Msa0696930:intron 40.0%
CTTGAGTACTCCACAACCAT+CGG - chr4_4:66941181-66941200 Msa0696930:intron 45.0%
GAGTATACATCCGATGGTTG+TGG + chr4_4:66941194-66941213 None:intergenic 45.0%
GGTCGGATTGATATTCGTGT+TGG + chr4_4:66941378-66941397 None:intergenic 45.0%
GATGGCCACTTACGTTTCAA+GGG + chr4_4:66941862-66941881 None:intergenic 45.0%
TGATGGCCACTTACGTTTCA+AGG + chr4_4:66941863-66941882 None:intergenic 45.0%
CCACTAACCGAAAGGAATGA+TGG + chr4_4:66941880-66941899 None:intergenic 45.0%
CCATCATTCCTTTCGGTTAG+TGG - chr4_4:66941877-66941896 Msa0696930:intron 45.0%
! TGTAGAGCGCTCATCTAACT+TGG - chr4_4:66942025-66942044 Msa0696930:intron 45.0%
GCGCTCATCTAACTTGGTAT+CGG - chr4_4:66942031-66942050 Msa0696930:intron 45.0%
TGCAAGAGAGGAGTAGAATG+TGG + chr4_4:66942207-66942226 None:intergenic 45.0%
TTGGGGGAAATTTGCAAGAG+AGG + chr4_4:66942219-66942238 None:intergenic 45.0%
CCCCATCTAAACACACTCTA+AGG + chr4_4:66942925-66942944 None:intergenic 45.0%
AGAGGACCATCATCAAGCAA+TGG - chr4_4:66943485-66943504 Msa0696930:intron 45.0%
!! GGATCCTACTTTGGAACTCA+AGG - chr4_4:66943506-66943525 Msa0696930:intron 45.0%
TGTTGGGTGTATGTTGTGCT+AGG - chr4_4:66943627-66943646 Msa0696930:intron 45.0%
!!! TTATTTTATTTTATATTTTG+AGG + chr4_4:66940837-66940856 None:intergenic 5.0%
!! GCTGGCTCATGCTTGCTATT+AGG - chr4_4:66941001-66941020 Msa0696930:intron 50.0%
GAAGCTACTAGCCAAACGTG+GGG + chr4_4:66941794-66941813 None:intergenic 50.0%
GGAAGCTACTAGCCAAACGT+GGG + chr4_4:66941795-66941814 None:intergenic 50.0%
TGGAAGCTACTAGCCAAACG+TGG + chr4_4:66941796-66941815 None:intergenic 50.0%
CAATGGATCACGCGGCAAAA+TGG + chr4_4:66941816-66941835 None:intergenic 50.0%
! CATTTTGCCGCGTGATCCAT+TGG - chr4_4:66941814-66941833 Msa0696930:intron 50.0%
TCAAGGGAAGTTGCGCACTT+TGG + chr4_4:66941846-66941865 None:intergenic 50.0%
AGCGCTCTACACCCAAACAA+GGG + chr4_4:66942016-66942035 None:intergenic 50.0%
TAACGTATGCAGGTGGCTGT+AGG + chr4_4:66943769-66943788 None:intergenic 50.0%
TCCACGCACCTCTTCAACGA+GGG + chr4_4:66941770-66941789 None:intergenic 55.0%
TTCCACGCACCTCTTCAACG+AGG + chr4_4:66941771-66941790 None:intergenic 55.0%
GACTCTGCCAATGGATCACG+CGG + chr4_4:66941824-66941843 None:intergenic 55.0%
CGCACTTTGGACTCTGCCAA+TGG + chr4_4:66941833-66941852 None:intergenic 55.0%
GAGCGCTCTACACCCAAACA+AGG + chr4_4:66942017-66942036 None:intergenic 55.0%
GTATGCAGGTGGCTGTAGGA+AGG + chr4_4:66943765-66943784 None:intergenic 55.0%
! TCCCTCGTTGAAGAGGTGCG+TGG - chr4_4:66941766-66941785 Msa0696930:intron 60.0%
GGTGCGTGGAACCCCACGTT+TGG - chr4_4:66941780-66941799 Msa0696930:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 66939685 66943822 66939685 ID=Msa0696930;Name=Msa0696930
chr4_4 mRNA 66939685 66943822 66939685 ID=Msa0696930-mRNA-1;Parent=Msa0696930;Name=Msa0696930-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|0.66|0.5|0.66|3|0|91
chr4_4 exon 66943641 66943822 66943641 ID=Msa0696930-mRNA-1:exon:19529;Parent=Msa0696930-mRNA-1
chr4_4 exon 66939980 66940058 66939980 ID=Msa0696930-mRNA-1:exon:19528;Parent=Msa0696930-mRNA-1
chr4_4 exon 66939685 66939699 66939685 ID=Msa0696930-mRNA-1:exon:19527;Parent=Msa0696930-mRNA-1
chr4_4 CDS 66943641 66943822 66943641 ID=Msa0696930-mRNA-1:cds;Parent=Msa0696930-mRNA-1
chr4_4 CDS 66939980 66940058 66939980 ID=Msa0696930-mRNA-1:cds;Parent=Msa0696930-mRNA-1
chr4_4 CDS 66939685 66939699 66939685 ID=Msa0696930-mRNA-1:cds;Parent=Msa0696930-mRNA-1
Gene Sequence

>Msa0696930

ATGGGGAGAGGAAAGATTGTGATTCGAAGGATTGAGAATTTGACAAGCCGTCAAGTGACTTTCTCAAAGAGAAGAAAAGGGTTGATGAAGAAAGCTAAAGAACTATCCATTCTTTGTGATGCACAAGTTGGATTGATTTTGTTCTCCTCTACTCACAAGCTTTATGACTATGCAAGTTCCAGCATGCAGTCAGTGATCGAGCGTTATAACAAGTTAGTAGAGGACCATCATCAAGCAATGGATCCTACTTTGGAACTCAAGCTTTACGTACGTTGA
Protein sequence

>Msa0696930

MGRGKIVIRRIENLTSRQVTFSKRRKGLMKKAKELSILCDAQVGLILFSSTHKLYDYASSSMQSVIERYNKLVEDHHQAMDPTLELKLYVR*