AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0697500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0697500 MtrunA17_Chr8g0358781 56.250 80 35 0 3 82 363 442 2.64e-25 98.2
Msa0697500 MtrunA17_Chr8g0358821 58.228 79 33 0 4 82 709 787 1.07e-24 96.7
Msa0697500 MtrunA17_Chr2g0314871 45.783 83 43 1 4 84 681 763 1.13e-17 76.6
Msa0697500 MtrunA17_Chr2g0315151 55.072 69 31 0 4 72 685 753 1.29e-17 76.6
Msa0697500 MtrunA17_Chr3g0078881 45.070 71 39 0 6 76 71 141 9.42e-17 70.5
Msa0697500 MtrunA17_Chr5g0438071 52.174 69 33 0 4 72 679 747 1.12e-16 73.9
Msa0697500 MtrunA17_Chr7g0236121 46.377 69 37 0 3 71 523 591 1.85e-16 73.2
Msa0697500 MtrunA17_Chr7g0236161 46.377 69 37 0 3 71 489 557 1.94e-16 73.2
Msa0697500 MtrunA17_Chr7g0236201 46.377 69 37 0 3 71 489 557 2.14e-16 73.2
Msa0697500 MtrunA17_Chr8g0354311 49.275 69 35 0 3 71 57 125 3.17e-16 68.6
Msa0697500 MtrunA17_Chr4g0047561 50.000 70 35 0 3 72 65 134 5.25e-16 71.6
Msa0697500 MtrunA17_Chr8g0359691 49.275 69 35 0 4 72 683 751 6.52e-16 71.6
Msa0697500 MtrunA17_Chr2g0314961 49.275 69 35 0 4 72 175 243 7.86e-16 71.2
Msa0697500 MtrunA17_Chr7g0236551 48.529 68 35 0 4 71 508 575 1.11e-15 70.9
Msa0697500 MtrunA17_Chr2g0315081 49.275 69 35 0 4 72 673 741 1.24e-15 70.9
Msa0697500 MtrunA17_Chr2g0314911 50.000 70 35 0 3 72 680 749 1.26e-15 70.9
Msa0697500 MtrunA17_Chr2g0314901 48.571 70 36 0 3 72 687 756 1.42e-15 70.9
Msa0697500 MtrunA17_Chr2g0314991 50.725 69 34 0 4 72 1196 1264 1.74e-15 70.5
Msa0697500 MtrunA17_Chr2g0314991 47.826 69 36 0 4 72 230 298 3.78e-15 69.3
Msa0697500 MtrunA17_Chr2g0280771 47.059 68 36 0 4 71 502 569 1.74e-15 70.5
Msa0697500 MtrunA17_Chr7g0236341 45.714 70 38 0 4 73 538 607 2.59e-15 70.1
Msa0697500 MtrunA17_Chr2g0280831 47.887 71 37 0 4 74 115 185 3.05e-15 69.7
Msa0697500 MtrunA17_Chr7g0236231 47.059 68 36 0 4 71 538 605 3.27e-15 69.7
Msa0697500 MtrunA17_Chr2g0281971 51.429 70 34 0 3 72 67 136 4.42e-15 68.9
Msa0697500 MtrunA17_Chr2g0315061 51.562 64 31 0 9 72 61 124 4.49e-15 68.9
Msa0697500 MtrunA17_Chr7g0236511 45.588 68 37 0 4 71 521 588 4.82e-15 69.3
Msa0697500 MtrunA17_Chr2g0280781 46.377 69 37 0 6 74 532 600 4.92e-15 68.9
Msa0697500 MtrunA17_Chr2g0314821 46.377 69 37 0 4 72 683 751 5.33e-15 68.9
Msa0697500 MtrunA17_Chr8g0358901 49.275 69 35 0 4 72 48 116 5.83e-15 68.6
Msa0697500 MtrunA17_Chr2g0280801 47.887 71 37 0 4 74 547 617 5.87e-15 68.9
Msa0697500 MtrunA17_Chr2g0312571 45.833 72 39 0 1 72 62 133 6.41e-15 68.6
Msa0697500 MtrunA17_Chr7g0236561 45.588 68 37 0 4 71 525 592 7.41e-15 68.6
Msa0697500 MtrunA17_Chr2g0280681 47.059 68 36 0 4 71 521 588 8.59e-15 68.6
Msa0697500 MtrunA17_Chr5g0443531 47.826 69 36 0 4 72 696 764 8.93e-15 68.6
Msa0697500 MtrunA17_Chr8g0354281 47.826 69 36 0 3 71 354 422 9.29e-15 68.2
Msa0697500 MtrunA17_Chr7g0236531 45.588 68 37 0 4 71 58 125 1.10e-14 67.8
Msa0697500 MtrunA17_Chr5g0428101 40.964 83 47 1 3 83 520 602 1.18e-14 68.2
Msa0697500 MtrunA17_Chr8g0354351 46.377 69 37 0 3 71 352 420 1.23e-14 67.8
Msa0697500 MtrunA17_Chr8g0340071 47.826 69 36 0 6 74 524 592 1.24e-14 68.2
Msa0697500 MtrunA17_Chr7g0236651 45.588 68 37 0 4 71 505 572 1.39e-14 67.8
Msa0697500 MtrunA17_Chr7g0236571 45.588 68 37 0 4 71 359 426 1.43e-14 67.8
Msa0697500 MtrunA17_Chr2g0312561 45.833 72 39 0 1 72 59 130 1.43e-14 67.8
Msa0697500 MtrunA17_Chr4g0048701 47.143 70 37 0 6 75 68 137 1.45e-14 64.7
Msa0697500 MtrunA17_Chr2g0314841 46.377 69 37 0 4 72 680 748 1.48e-14 67.8
Msa0697500 MtrunA17_Chr7g0236471 47.059 68 36 0 4 71 360 427 1.57e-14 67.8
Msa0697500 MtrunA17_Chr8g0379931 50.000 68 34 0 4 71 729 796 1.75e-14 67.4
Msa0697500 MtrunA17_Chr3g0093161 44.928 69 38 0 3 71 516 584 1.96e-14 67.4
Msa0697500 MtrunA17_Chr8g0340081 47.059 68 36 0 4 71 526 593 2.00e-14 67.4
Msa0697500 MtrunA17_Chr3g0078531 46.970 66 35 0 6 71 549 614 2.27e-14 67.4
Msa0697500 MtrunA17_Chr6g0453571 45.714 70 38 0 3 72 359 428 2.36e-14 67.0
Msa0697500 MtrunA17_Chr8g0340091 48.485 66 34 0 6 71 553 618 2.50e-14 67.0
Msa0697500 MtrunA17_Chr2g0314881 46.377 69 37 0 4 72 248 316 3.29e-14 66.6
Msa0697500 MtrunA17_Chr2g0315021 47.143 70 37 0 4 73 98 167 3.32e-14 65.5
Msa0697500 MtrunA17_Chr7g0236691 44.118 68 38 0 4 71 520 587 3.72e-14 66.6
Msa0697500 MtrunA17_Chr8g0340111 45.588 68 37 0 4 71 524 591 4.23e-14 66.6
Msa0697500 MtrunA17_Chr8g0361331 42.424 66 38 0 6 71 7 72 4.24e-14 63.5
Msa0697500 MtrunA17_Chr4g0071371 45.714 70 37 1 4 72 155 224 4.48e-14 66.2
Msa0697500 MtrunA17_Chr2g0280711 45.455 66 36 0 6 71 552 617 4.58e-14 66.2
Msa0697500 MtrunA17_Chr8g0354431 44.928 69 38 0 3 71 361 429 4.59e-14 66.2
Msa0697500 MtrunA17_Chr8g0358911 47.826 69 36 0 4 72 65 133 5.25e-14 66.2
Msa0697500 MtrunA17_Chr8g0340051 47.059 68 36 0 4 71 48 115 5.80e-14 65.9
Msa0697500 MtrunA17_Chr8g0358101 47.059 68 36 0 4 71 484 551 5.81e-14 66.2
Msa0697500 MtrunA17_Chr8g0365311 42.308 78 45 0 1 78 112 189 6.13e-14 65.1
Msa0697500 MtrunA17_Chr4g0048801 46.875 64 34 0 4 67 538 601 6.95e-14 65.9
Msa0697500 MtrunA17_Chr7g0242201 47.826 69 36 0 4 72 63 131 7.44e-14 65.5
Msa0697500 MtrunA17_Chr8g0376131 42.647 68 39 0 4 71 71 138 9.89e-14 65.5
Msa0697500 MtrunA17_Chr2g0280791 45.070 71 39 0 4 74 541 611 1.07e-13 65.5
Msa0697500 MtrunA17_Chr8g0354421 44.928 69 38 0 3 71 382 450 1.09e-13 65.1
Msa0697500 MtrunA17_Chr7g0236641 42.647 68 39 0 4 71 545 612 1.16e-13 65.1
Msa0697500 MtrunA17_Chr2g0299041 45.714 70 37 1 4 72 133 202 1.18e-13 65.1
Msa0697500 MtrunA17_Chr3g0078521 45.455 66 36 0 6 71 541 606 1.20e-13 65.1
Msa0697500 MtrunA17_Chr2g0318941 45.455 66 36 0 6 71 95 160 1.22e-13 64.3
Msa0697500 MtrunA17_Chr3g0078541 45.455 66 36 0 6 71 552 617 1.27e-13 65.1
Msa0697500 MtrunA17_Chr6g0475131 42.647 68 39 0 4 71 29 96 1.34e-13 64.7
Msa0697500 MtrunA17_Chr8g0361251 43.478 69 39 0 3 71 525 593 1.34e-13 65.1
Msa0697500 MtrunA17_Chr4g0023221 46.154 65 35 0 7 71 753 817 1.53e-13 64.7
Msa0697500 MtrunA17_Chr6g0475201 42.647 68 39 0 4 71 594 661 1.88e-13 64.7
Msa0697500 MtrunA17_Chr8g0354331 43.478 69 39 0 3 71 119 187 1.90e-13 64.7
Msa0697500 MtrunA17_Chr3g0081011 42.647 68 39 0 4 71 359 426 1.90e-13 64.7
Msa0697500 MtrunA17_Chr8g0358161 47.059 68 36 0 4 71 66 133 2.05e-13 64.3
Msa0697500 MtrunA17_Chr8g0359651 43.478 69 39 0 4 72 682 750 2.15e-13 64.3
Msa0697500 MtrunA17_Chr8g0354271 45.588 68 37 0 4 71 355 422 2.24e-13 64.3
Msa0697500 MtrunA17_Chr8g0358121 45.588 68 37 0 4 71 482 549 3.16e-13 63.9
Msa0697500 MtrunA17_Chr8g0357881 47.059 68 36 0 4 71 496 563 3.38e-13 63.9
Msa0697500 MtrunA17_Chr5g0428111 44.928 69 38 0 3 71 522 590 3.39e-13 63.9
Msa0697500 MtrunA17_Chr6g0484231 44.118 68 38 0 4 71 70 137 3.67e-13 63.5
Msa0697500 MtrunA17_Chr4g0042341 42.254 71 41 0 4 74 543 613 4.91e-13 63.5
Msa0697500 MtrunA17_Chr1g0191101 44.118 68 38 0 4 71 22 89 5.33e-13 59.7
Msa0697500 MtrunA17_Chr8g0357801 47.826 69 36 0 4 72 493 561 5.89e-13 63.2
Msa0697500 MtrunA17_Chr8g0361281 46.377 69 37 0 3 71 532 600 6.45e-13 63.2
Msa0697500 MtrunA17_Chr4g0055011 39.706 68 41 0 4 71 91 158 6.52e-13 62.8
Msa0697500 MtrunA17_Chr8g0358141 46.377 69 37 0 4 72 86 154 6.65e-13 62.8
Msa0697500 MtrunA17_Chr4g0042361 42.254 71 41 0 4 74 559 629 6.65e-13 63.2
Msa0697500 MtrunA17_Chr3g0081031 42.254 71 41 0 4 74 372 442 7.64e-13 62.8
Msa0697500 MtrunA17_Chr8g0359641 43.284 67 38 0 6 72 684 750 7.84e-13 62.8
Msa0697500 MtrunA17_Chr2g0280691 45.455 66 36 0 6 71 548 613 8.64e-13 62.8
Msa0697500 MtrunA17_Chr8g0347571 44.118 68 38 0 4 71 590 657 8.76e-13 62.8
Msa0697500 MtrunA17_Chr5g0394011 45.588 68 37 0 4 71 371 438 8.93e-13 62.8
Msa0697500 MtrunA17_Chr3g0082941 42.029 69 40 0 3 71 192 260 9.08e-13 62.8
Msa0697500 MtrunA17_Chr3g0084661 38.889 72 44 0 4 75 52 123 9.33e-13 62.4
Msa0697500 MtrunA17_Chr8g0358081 47.059 68 36 0 4 71 481 548 9.67e-13 62.8
Msa0697500 MtrunA17_Chr3g0078551 43.939 66 37 0 6 71 546 611 1.01e-12 62.4
Msa0697500 MtrunA17_Chr4g0048761 46.377 69 37 0 7 75 557 625 1.14e-12 62.4
Msa0697500 MtrunA17_Chr7g0226891 45.588 68 37 0 4 71 69 136 1.16e-12 62.4
Msa0697500 MtrunA17_Chr8g0357961 44.118 68 38 0 4 71 504 571 1.34e-12 62.0
Msa0697500 MtrunA17_Chr8g0357991 44.118 68 38 0 4 71 505 572 1.34e-12 62.0
Msa0697500 MtrunA17_Chr8g0357981 45.588 68 37 0 4 71 325 392 1.40e-12 62.0
Msa0697500 MtrunA17_Chr5g0422921 40.278 72 43 0 3 74 517 588 1.55e-12 62.0
Msa0697500 MtrunA17_Chr1g0206291 45.714 70 38 0 3 72 372 441 1.85e-12 61.6
Msa0697500 MtrunA17_Chr1g0160921 44.118 68 38 0 4 71 71 138 1.87e-12 61.6
Msa0697500 MtrunA17_Chr8g0360591 44.928 69 38 0 4 72 63 131 2.51e-12 61.2
Msa0697500 MtrunA17_Chr1g0206551 44.118 68 38 0 4 71 55 122 2.55e-12 61.2
Msa0697500 MtrunA17_Chr4g0020081 45.070 71 39 0 4 74 531 601 2.64e-12 61.2
Msa0697500 MtrunA17_Chr8g0358071 42.647 68 39 0 4 71 496 563 3.05e-12 61.2
Msa0697500 MtrunA17_Chr8g0354441 42.029 69 40 0 3 71 369 437 3.10e-12 61.2
Msa0697500 MtrunA17_Chr4g0042351 44.118 68 38 0 4 71 473 540 3.23e-12 61.2
Msa0697500 MtrunA17_Chr3g0109411 43.662 71 39 1 3 72 343 413 3.25e-12 61.2
Msa0697500 MtrunA17_Chr4g0048581 43.662 71 40 0 4 74 551 621 3.28e-12 61.2
Msa0697500 MtrunA17_Chr4g0023111 43.077 65 37 0 7 71 737 801 3.28e-12 61.2
Msa0697500 MtrunA17_Chr4g0042381 46.154 65 35 0 7 71 476 540 3.49e-12 60.8
Msa0697500 MtrunA17_Chr1g0202331 44.928 69 38 0 3 71 550 618 3.52e-12 60.8
Msa0697500 MtrunA17_Chr3g0143961 40.000 70 42 0 4 73 87 156 3.62e-12 60.8
Msa0697500 MtrunA17_Chr3g0081061 41.429 70 41 0 4 73 57 126 4.12e-12 58.2
Msa0697500 MtrunA17_Chr8g0361301 39.130 69 42 0 3 71 525 593 4.30e-12 60.8
Msa0697500 MtrunA17_Chr8g0361261 39.130 69 42 0 3 71 556 624 4.35e-12 60.8
Msa0697500 MtrunA17_Chr1g0206421 44.118 68 38 0 4 71 248 315 4.50e-12 60.5
Msa0697500 MtrunA17_Chr1g0181341 42.254 71 39 1 4 72 65 135 5.48e-12 60.5
Msa0697500 MtrunA17_Chr5g0394021 44.118 68 38 0 4 71 343 410 5.99e-12 60.5
Msa0697500 MtrunA17_Chr8g0358031 45.588 68 37 0 4 71 499 566 6.46e-12 60.1
Msa0697500 MtrunA17_Chr1g0206331 43.478 69 39 0 3 71 354 422 7.59e-12 60.1
Msa0697500 MtrunA17_Chr6g0474901 39.706 68 41 0 4 71 586 653 7.60e-12 60.1
Msa0697500 MtrunA17_Chr2g0277731 39.744 78 38 1 3 71 322 399 7.73e-12 60.1
Msa0697500 MtrunA17_Chr6g0474871 39.706 68 41 0 4 71 585 652 8.54e-12 60.1
Msa0697500 MtrunA17_Chr8g0357631 45.588 68 37 0 4 71 488 555 8.90e-12 59.7
Msa0697500 MtrunA17_Chr6g0475001 39.706 68 41 0 4 71 592 659 9.24e-12 59.7
Msa0697500 MtrunA17_Chr6g0475091 39.706 68 41 0 4 71 601 668 9.80e-12 59.7
Msa0697500 MtrunA17_Chr5g0393981 48.485 66 34 0 6 71 418 483 1.23e-11 59.3
Msa0697500 MtrunA17_Chr6g0475111 41.176 68 40 0 4 71 607 674 1.24e-11 59.3
Msa0697500 MtrunA17_Chr7g0239171 45.161 62 34 0 10 71 360 421 1.27e-11 59.3
Msa0697500 MtrunA17_Chr1g0206561 39.706 68 41 0 4 71 349 416 1.27e-11 59.3
Msa0697500 MtrunA17_Chr4g0048741 45.588 68 37 0 4 71 552 619 1.35e-11 59.3
Msa0697500 MtrunA17_Chr1g0205771 41.176 68 40 0 4 71 363 430 1.35e-11 59.3
Msa0697500 MtrunA17_Chr4g0042441 41.176 68 40 0 4 71 520 587 1.57e-11 59.3
Msa0697500 MtrunA17_Chr1g0160561 44.118 68 37 1 4 71 365 431 1.59e-11 58.9
Msa0697500 MtrunA17_Chr1g0154371 45.588 68 37 0 4 71 376 443 1.64e-11 58.9
Msa0697500 MtrunA17_Chr8g0361431 39.437 71 43 0 4 74 504 574 1.68e-11 58.9
Msa0697500 MtrunA17_Chr2g0318841 42.029 69 40 0 3 71 520 588 1.68e-11 58.9
Msa0697500 MtrunA17_Chr7g0239211 45.161 62 34 0 10 71 369 430 1.69e-11 58.9
Msa0697500 MtrunA17_Chr2g0323231 44.615 65 36 0 7 71 201 265 1.71e-11 58.9
Msa0697500 MtrunA17_Chr2g0330471 41.429 70 41 0 3 72 425 494 1.74e-11 58.9
Msa0697500 MtrunA17_Chr3g0098791 39.706 68 41 0 6 73 524 591 1.77e-11 58.9
Msa0697500 MtrunA17_Chr4g0042391 44.615 65 36 0 7 71 476 540 1.83e-11 58.9
Msa0697500 MtrunA17_Chr3g0081001 42.647 68 39 0 4 71 363 430 1.84e-11 58.9
Msa0697500 MtrunA17_Chr1g0160711 45.588 68 36 1 4 71 347 413 1.91e-11 58.9
Msa0697500 MtrunA17_Chr5g0426941 42.424 66 38 0 6 71 361 426 2.11e-11 58.9
Msa0697500 MtrunA17_Chr4g0048731 45.588 68 37 0 4 71 66 133 2.19e-11 58.5
Msa0697500 MtrunA17_Chr1g0206391 40.278 72 43 0 3 74 59 130 2.21e-11 58.5
Msa0697500 MtrunA17_Chr2g0318831 42.647 68 39 0 4 71 522 589 2.36e-11 58.5
Msa0697500 MtrunA17_Chr6g0474811 38.235 68 42 0 4 71 593 660 2.44e-11 58.5
Msa0697500 MtrunA17_Chr5g0394001 44.118 68 38 0 4 71 349 416 2.51e-11 58.5
Msa0697500 MtrunA17_Chr3g0084621 39.706 68 41 0 6 73 525 592 2.62e-11 58.5
Msa0697500 MtrunA17_Chr8g0389251 39.130 69 42 0 4 72 423 491 2.86e-11 58.5
Msa0697500 MtrunA17_Chr6g0474861 38.235 68 42 0 4 71 306 373 2.95e-11 58.2
Msa0697500 MtrunA17_Chr8g0359581 38.806 67 41 0 6 72 7 73 3.19e-11 57.0
Msa0697500 MtrunA17_Chr4g0048641 45.902 61 33 0 7 67 510 570 3.44e-11 58.2
Msa0697500 MtrunA17_Chr4g0042421 41.176 68 40 0 4 71 524 591 3.50e-11 58.2
Msa0697500 MtrunA17_Chr8g0357711 44.118 68 38 0 4 71 497 564 3.65e-11 58.2
Msa0697500 MtrunA17_Chr4g0023071 44.928 69 37 1 3 71 514 581 3.69e-11 58.2
Msa0697500 MtrunA17_Chr3g0109431 45.070 71 38 1 3 72 346 416 3.70e-11 58.2
Msa0697500 MtrunA17_Chr8g0357761 44.118 68 38 0 4 71 500 567 3.99e-11 58.2
Msa0697500 MtrunA17_Chr2g0280751 43.662 71 40 0 4 74 546 616 4.00e-11 58.2
Msa0697500 MtrunA17_Chr4g0048791 43.750 64 36 0 4 67 552 615 4.77e-11 57.8
Msa0697500 MtrunA17_Chr1g0172951 43.548 62 35 0 10 71 369 430 4.86e-11 57.8
Msa0697500 MtrunA17_Chr5g0413171 44.118 68 38 0 4 71 107 174 4.87e-11 57.8
Msa0697500 MtrunA17_Chr1g0159611 41.096 73 38 1 3 70 257 329 4.94e-11 57.8
Msa0697500 MtrunA17_Chr1g0206531 42.254 71 41 0 4 74 357 427 4.97e-11 57.8
Msa0697500 MtrunA17_Chr1g0206521 42.254 71 41 0 4 74 355 425 5.11e-11 57.8
Msa0697500 MtrunA17_Chr1g0206521 42.254 71 41 0 4 74 997 1067 5.11e-11 57.8
Msa0697500 MtrunA17_Chr3g0144551 42.029 69 40 0 4 72 153 221 5.27e-11 57.8
Msa0697500 MtrunA17_Chr8g0357671 44.118 68 38 0 4 71 64 131 5.61e-11 55.8
Msa0697500 MtrunA17_Chr2g0318811 39.706 68 41 0 4 71 520 587 5.83e-11 57.4
Msa0697500 MtrunA17_Chr3g0119041 41.791 67 39 0 6 72 362 428 5.91e-11 57.4
Msa0697500 MtrunA17_Chr7g0239311 43.548 62 35 0 10 71 367 428 5.94e-11 57.4
Msa0697500 MtrunA17_Chr2g0323301 43.478 69 38 1 3 71 513 580 6.01e-11 57.4
Msa0697500 MtrunA17_Chr2g0280731 42.254 71 41 0 4 74 570 640 6.09e-11 57.4
Msa0697500 MtrunA17_Chr1g0206231 41.176 68 40 0 4 71 366 433 6.16e-11 57.4
Msa0697500 MtrunA17_Chr1g0206211 43.939 66 37 0 6 71 49 114 6.31e-11 56.2
Msa0697500 MtrunA17_Chr1g0160721 44.928 69 37 1 4 72 370 437 6.46e-11 57.4
Msa0697500 MtrunA17_Chr7g0236621 42.222 45 26 0 27 71 1 45 6.53e-11 53.1
Msa0697500 MtrunA17_Chr7g0239191 43.548 62 35 0 10 71 400 461 7.02e-11 57.4
Msa0697500 MtrunA17_Chr1g0206401 40.278 72 43 0 3 74 369 440 7.07e-11 57.4
Msa0697500 MtrunA17_Chr1g0206461 40.845 71 42 0 4 74 353 423 7.11e-11 57.4
Msa0697500 MtrunA17_Chr4g0049611 38.571 70 40 1 10 76 369 438 7.28e-11 57.4
Msa0697500 MtrunA17_Chr0c04g0492001 45.312 64 34 1 3 66 539 601 7.30e-11 57.4
Msa0697500 MtrunA17_Chr0c04g0492031 45.312 64 34 1 3 66 539 601 7.44e-11 57.4
Msa0697500 MtrunA17_Chr3g0134291 45.312 64 34 1 3 66 539 601 7.51e-11 57.4
Msa0697500 MtrunA17_Chr4g0048631 42.424 66 38 0 6 71 554 619 7.76e-11 57.0
Msa0697500 MtrunA17_Chr4g0063691 41.379 87 49 2 3 87 556 642 7.82e-11 57.0
Msa0697500 MtrunA17_Chr1g0209501 42.647 68 38 1 4 71 328 394 7.89e-11 57.0
Msa0697500 MtrunA17_Chr3g0084431 39.394 66 40 0 6 71 516 581 8.36e-11 57.0
Msa0697500 MtrunA17_Chr1g0175451 42.647 68 39 0 4 71 347 414 9.44e-11 57.0
Msa0697500 MtrunA17_Chr3g0109461 43.662 71 39 1 3 72 358 428 9.63e-11 57.0
Msa0697500 MtrunA17_Chr8g0375511 41.667 72 42 0 3 74 858 929 9.67e-11 57.0
Msa0697500 MtrunA17_Chr8g0361441 41.176 68 40 0 4 71 526 593 9.69e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0697500 AT1G56145.2 55.844 77 34 0 4 80 706 782 7.13e-21 86.3
Msa0697500 AT1G56145.3 60.294 68 27 0 4 71 603 670 2.63e-20 84.7
Msa0697500 AT1G56145.1 60.294 68 27 0 4 71 706 773 6.04e-20 83.6
Msa0697500 AT1G56140.1 56.522 69 30 0 4 72 712 780 8.87e-18 77.4
Msa0697500 AT1G56130.3 56.522 69 30 0 4 72 514 582 9.85e-18 77.0
Msa0697500 AT1G56130.1 56.522 69 30 0 4 72 565 633 9.89e-18 77.0
Msa0697500 AT1G56130.2 56.522 69 30 0 4 72 713 781 9.97e-18 77.0
Msa0697500 AT1G56120.3 55.072 69 31 0 4 72 563 631 1.16e-17 77.0
Msa0697500 AT1G56120.2 55.072 69 31 0 4 72 711 779 1.16e-17 77.0
Msa0697500 AT1G56120.1 55.072 69 31 0 4 72 729 797 1.17e-17 77.0
Msa0697500 AT1G61440.1 49.275 69 35 0 4 72 497 565 1.76e-17 76.6
Msa0697500 AT1G61440.3 49.275 69 35 0 4 72 502 570 1.76e-17 76.6
Msa0697500 AT1G61440.2 49.275 69 35 0 4 72 527 595 1.76e-17 76.6
Msa0697500 AT1G53430.2 55.072 69 31 0 4 72 647 715 2.96e-17 75.9
Msa0697500 AT1G53440.1 55.072 69 31 0 4 72 686 754 2.96e-17 75.9
Msa0697500 AT1G53430.1 55.072 69 31 0 4 72 688 756 3.33e-17 75.9
Msa0697500 AT1G07650.3 53.623 69 32 0 4 72 671 739 4.90e-17 75.1
Msa0697500 AT1G07650.1 53.623 69 32 0 4 72 697 765 5.15e-17 75.1
Msa0697500 AT1G07650.2 53.623 69 32 0 4 72 703 771 5.21e-17 75.1
Msa0697500 AT1G07650.4 53.623 69 32 0 4 72 484 552 5.88e-17 75.1
Msa0697500 AT3G14840.2 50.725 69 34 0 4 72 691 759 6.77e-17 74.7
Msa0697500 AT1G61430.4 46.053 76 41 0 4 79 485 560 1.11e-16 74.3
Msa0697500 AT1G61430.2 46.053 76 41 0 4 79 508 583 1.11e-16 74.3
Msa0697500 AT1G61430.6 46.053 76 41 0 4 79 508 583 1.11e-16 74.3
Msa0697500 AT1G61430.3 46.053 76 41 0 4 79 517 592 1.11e-16 74.3
Msa0697500 AT1G29730.3 52.174 69 33 0 4 72 692 760 1.51e-16 73.9
Msa0697500 AT1G29730.2 52.174 69 33 0 4 72 692 760 1.52e-16 73.9
Msa0697500 AT1G29720.1 52.174 69 33 0 4 72 692 760 3.44e-16 72.8
Msa0697500 AT1G11280.5 48.000 75 39 0 3 77 523 597 3.95e-16 72.8
Msa0697500 AT1G11280.3 48.000 75 39 0 3 77 511 585 4.00e-16 72.8
Msa0697500 AT1G11280.2 48.000 75 39 0 3 77 523 597 4.00e-16 72.8
Msa0697500 AT1G16670.1 49.275 69 35 0 4 72 60 128 4.12e-16 72.4
Msa0697500 AT1G61390.2 52.941 68 32 0 4 71 371 438 4.26e-16 72.4
Msa0697500 AT1G61390.1 52.941 68 32 0 4 71 539 606 4.33e-16 72.4
Msa0697500 AT1G61400.2 44.872 78 41 1 4 81 519 594 4.63e-16 72.4
Msa0697500 AT1G61480.1 55.882 68 30 0 4 71 515 582 5.10e-16 72.4
Msa0697500 AT1G61400.1 48.529 68 35 0 4 71 519 586 6.51e-16 72.0
Msa0697500 AT1G29730.4 50.725 69 34 0 4 72 659 727 9.40e-16 71.6
Msa0697500 AT1G29730.1 50.725 69 34 0 4 72 659 727 9.43e-16 71.6
Msa0697500 AT1G61430.11 48.529 68 35 0 4 71 485 552 1.04e-15 71.6
Msa0697500 AT1G61430.12 48.529 68 35 0 4 71 485 552 1.04e-15 71.6
Msa0697500 AT1G61430.13 48.529 68 35 0 4 71 485 552 1.04e-15 71.6
Msa0697500 AT1G61430.9 48.529 68 35 0 4 71 508 575 1.04e-15 71.6
Msa0697500 AT1G61420.5 50.000 68 34 0 4 71 365 432 1.27e-15 71.2
Msa0697500 AT1G61460.1 52.941 68 32 0 4 71 473 540 1.29e-15 71.2
Msa0697500 AT1G11300.2 50.000 68 34 0 4 71 513 580 1.97e-15 70.5
Msa0697500 AT1G11300.1 50.000 68 34 0 4 71 528 595 1.97e-15 70.5
Msa0697500 AT1G11330.3 48.529 68 35 0 4 71 543 610 1.98e-15 70.5
Msa0697500 AT1G11330.2 48.529 68 35 0 4 71 543 610 2.08e-15 70.5
Msa0697500 AT1G11330.1 48.529 68 35 0 4 71 541 608 2.18e-15 70.5
Msa0697500 AT1G53420.1 52.239 67 32 0 6 72 645 711 2.80e-15 70.1
Msa0697500 AT1G29740.2 49.275 69 35 0 4 72 696 764 3.10e-15 70.1
Msa0697500 AT1G29740.1 49.275 69 35 0 4 72 696 764 3.11e-15 70.1
Msa0697500 AT1G61550.1 50.000 68 34 0 4 71 508 575 3.33e-15 70.1
Msa0697500 AT1G11280.4 48.000 75 39 0 3 77 521 595 3.54e-15 70.1
Msa0697500 AT1G11280.1 48.000 75 39 0 3 77 533 607 3.94e-15 69.7
Msa0697500 AT4G11900.10 44.928 69 38 0 4 72 556 624 3.98e-15 69.7
Msa0697500 AT4G11900.5 44.928 69 38 0 4 72 556 624 3.98e-15 69.7
Msa0697500 AT1G61360.2 47.143 70 37 0 4 73 436 505 5.04e-15 69.3
Msa0697500 AT1G61360.3 47.143 70 37 0 4 73 436 505 5.04e-15 69.3
Msa0697500 AT1G61360.4 47.143 70 37 0 4 73 436 505 5.04e-15 69.3
Msa0697500 AT1G61360.1 47.143 70 37 0 4 73 517 586 5.07e-15 69.3
Msa0697500 AT1G61430.1 48.529 68 35 0 4 71 511 578 7.93e-15 68.9
Msa0697500 AT1G61430.8 48.529 68 35 0 4 71 508 575 8.18e-15 68.9
Msa0697500 AT1G61430.7 48.529 68 35 0 4 71 508 575 8.18e-15 68.9
Msa0697500 AT1G61430.5 48.529 68 35 0 4 71 511 578 8.18e-15 68.9
Msa0697500 AT1G61500.2 48.529 68 35 0 4 71 492 559 8.89e-15 68.9
Msa0697500 AT1G61500.1 48.529 68 35 0 4 71 510 577 8.91e-15 68.9
Msa0697500 AT1G61500.3 48.529 68 35 0 4 71 515 582 8.91e-15 68.9
Msa0697500 AT1G61430.10 48.529 68 35 0 4 71 485 552 9.00e-15 68.9
Msa0697500 AT4G21390.1 50.000 68 34 0 4 71 548 615 9.29e-15 68.6
Msa0697500 AT3G09010.1 50.725 69 34 0 4 72 65 133 9.54e-15 68.6
Msa0697500 AT1G65790.3 46.377 69 37 0 4 72 538 606 1.09e-14 68.6
Msa0697500 AT1G65790.2 46.377 69 37 0 4 72 538 606 1.09e-14 68.6
Msa0697500 AT1G65800.2 46.377 69 37 0 4 72 542 610 1.09e-14 68.6
Msa0697500 AT1G61490.3 48.529 68 35 0 4 71 359 426 1.15e-14 68.6
Msa0697500 AT4G21390.2 50.000 68 34 0 4 71 548 615 1.15e-14 68.6
Msa0697500 AT1G61490.4 48.529 68 35 0 4 71 509 576 1.33e-14 68.2
Msa0697500 AT1G61490.1 48.529 68 35 0 4 71 509 576 1.33e-14 68.2
Msa0697500 AT1G61490.2 48.529 68 35 0 4 71 509 576 1.33e-14 68.2
Msa0697500 AT1G61490.5 48.529 68 35 0 4 71 509 576 1.33e-14 68.2
Msa0697500 AT1G61490.6 48.529 68 35 0 4 71 483 550 1.43e-14 68.2
Msa0697500 AT1G61490.7 48.529 68 35 0 4 71 483 550 1.43e-14 68.2
Msa0697500 AT1G61420.3 50.000 68 34 0 4 71 363 430 1.68e-14 68.2
Msa0697500 AT1G61370.1 45.588 68 37 0 4 71 520 587 2.06e-14 67.8
Msa0697500 AT1G61370.2 45.588 68 37 0 4 71 369 436 2.11e-14 67.8
Msa0697500 AT1G61420.2 50.000 68 34 0 4 71 515 582 2.14e-14 67.8
Msa0697500 AT1G61420.4 50.000 68 34 0 4 71 515 582 2.14e-14 67.8
Msa0697500 AT1G61420.1 50.000 68 34 0 4 71 513 580 2.20e-14 67.8
Msa0697500 AT3G09010.2 50.725 69 34 0 4 72 65 133 2.21e-14 67.0
Msa0697500 AT1G11303.1 48.485 66 34 0 6 71 530 595 2.43e-14 67.4
Msa0697500 AT4G11900.8 44.118 68 38 0 4 71 487 554 2.63e-14 67.4
Msa0697500 AT4G11900.2 44.118 68 38 0 4 71 556 623 2.65e-14 67.4
Msa0697500 AT4G11900.3 44.118 68 38 0 4 71 556 623 2.65e-14 67.4
Msa0697500 AT4G11900.6 44.118 68 38 0 4 71 556 623 2.65e-14 67.4
Msa0697500 AT4G11900.4 44.118 68 38 0 4 71 556 623 2.65e-14 67.4
Msa0697500 AT4G11900.7 44.118 68 38 0 4 71 556 623 2.66e-14 67.4
Msa0697500 AT4G11900.9 44.118 68 38 0 4 71 487 554 2.67e-14 67.4
Msa0697500 AT4G11900.1 44.118 68 38 0 4 71 556 623 2.68e-14 67.4
Msa0697500 AT1G70740.2 47.059 68 36 0 4 71 69 136 3.13e-14 67.0
Msa0697500 AT1G70740.1 47.059 68 36 0 4 71 81 148 3.13e-14 67.0
Msa0697500 AT1G66980.4 48.571 70 35 1 3 72 806 874 3.21e-14 67.4
Msa0697500 AT1G66980.1 48.571 70 35 1 3 72 823 891 3.21e-14 67.4
Msa0697500 AT1G66980.3 48.571 70 35 1 3 72 850 918 3.22e-14 67.4
Msa0697500 AT1G66980.2 48.571 70 35 1 3 72 852 920 3.22e-14 67.4
Msa0697500 AT1G29750.3 45.588 68 37 0 4 71 700 767 4.12e-14 67.0
Msa0697500 AT1G29750.1 44.928 69 38 0 4 72 685 753 7.24e-14 66.2
Msa0697500 AT1G29750.2 44.928 69 38 0 4 72 700 768 7.31e-14 66.2
Msa0697500 AT4G23180.3 46.377 69 37 0 3 71 366 434 1.11e-13 65.5
Msa0697500 AT5G38260.1 51.562 64 30 1 4 67 340 402 1.11e-13 65.5
Msa0697500 AT4G23180.2 46.377 69 37 0 3 71 366 434 1.12e-13 65.5
Msa0697500 AT4G23180.1 46.377 69 37 0 3 71 366 434 1.14e-13 65.5
Msa0697500 AT1G66930.2 47.692 65 34 0 3 67 573 637 2.22e-13 64.7
Msa0697500 AT4G23160.3 40.541 74 44 0 3 76 957 1030 4.56e-13 63.9
Msa0697500 AT4G23160.2 40.541 74 44 0 3 76 957 1030 4.56e-13 63.9
Msa0697500 AT1G61610.1 45.588 68 37 0 4 71 544 611 5.27e-13 63.9
Msa0697500 AT1G61610.2 44.928 69 38 0 3 71 543 611 5.33e-13 63.5
Msa0697500 AT1G70520.1 48.529 68 35 0 4 71 344 411 6.47e-13 63.5
Msa0697500 AT1G66930.1 34.513 113 61 1 3 102 364 476 6.95e-13 63.5
Msa0697500 AT4G21380.2 43.478 69 39 0 4 72 545 613 7.67e-13 63.2
Msa0697500 AT1G65790.1 45.455 66 36 0 6 71 540 605 7.93e-13 63.2
Msa0697500 AT1G65800.1 45.455 66 36 0 6 71 544 609 8.74e-13 63.2
Msa0697500 AT4G23270.2 43.478 69 39 0 3 71 344 412 1.09e-12 62.8
Msa0697500 AT4G23270.1 43.478 69 39 0 3 71 344 412 1.09e-12 62.8
Msa0697500 AT4G23270.3 43.478 69 39 0 3 71 344 412 1.09e-12 62.8
Msa0697500 AT4G11460.1 44.286 70 39 0 3 72 364 433 1.27e-12 62.8
Msa0697500 AT4G23210.2 44.118 68 38 0 4 71 377 444 1.74e-12 62.4
Msa0697500 AT4G23210.4 44.118 68 38 0 4 71 377 444 1.74e-12 62.4
Msa0697500 AT4G23210.5 44.118 68 38 0 4 71 377 444 1.75e-12 62.4
Msa0697500 AT4G23210.1 44.118 68 38 0 4 71 377 444 1.77e-12 62.4
Msa0697500 AT4G23210.3 44.118 68 38 0 4 71 377 444 1.78e-12 62.4
Msa0697500 AT5G38250.1 47.761 67 34 1 4 70 333 398 1.81e-12 62.0
Msa0697500 AT5G56790.1 41.096 73 43 0 1 73 406 478 2.51e-12 61.6
Msa0697500 AT4G27300.1 46.875 64 34 0 4 67 519 582 2.86e-12 61.6
Msa0697500 AT4G28670.1 49.275 69 35 0 3 71 349 417 2.94e-12 61.6
Msa0697500 AT4G23150.1 43.478 69 39 0 3 71 354 422 2.98e-12 61.6
Msa0697500 AT4G11490.1 44.118 68 38 0 4 71 340 407 3.03e-12 61.6
Msa0697500 AT1G61380.1 46.774 62 33 0 6 67 509 570 3.06e-12 61.6
Msa0697500 AT1G61380.2 46.774 62 33 0 6 67 362 423 3.07e-12 61.6
Msa0697500 AT1G11410.2 45.588 68 37 0 4 71 427 494 3.13e-12 61.6
Msa0697500 AT1G11410.3 45.588 68 37 0 4 71 518 585 3.25e-12 61.6
Msa0697500 AT1G11410.1 45.588 68 37 0 4 71 542 609 3.35e-12 61.6
Msa0697500 AT1G11410.4 45.588 68 37 0 4 71 549 616 3.45e-12 61.2
Msa0697500 AT1G66920.1 46.154 65 35 0 3 67 317 381 3.57e-12 61.2
Msa0697500 AT1G66920.2 46.154 65 35 0 3 67 325 389 3.57e-12 61.2
Msa0697500 AT5G39030.1 48.438 64 32 1 4 67 517 579 3.61e-12 61.2
Msa0697500 AT5G39030.2 48.438 64 32 1 4 67 511 573 3.97e-12 61.2
Msa0697500 AT4G21410.2 46.154 65 35 0 7 71 379 443 4.66e-12 60.8
Msa0697500 AT4G21400.6 45.455 66 36 0 7 72 383 448 5.32e-12 60.8
Msa0697500 AT4G21400.4 45.455 66 36 0 7 72 383 448 5.32e-12 60.8
Msa0697500 AT4G21400.5 45.455 66 36 0 7 72 383 448 5.32e-12 60.8
Msa0697500 AT4G21400.8 45.455 66 36 0 7 72 244 309 5.34e-12 60.8
Msa0697500 AT4G21400.7 45.455 66 36 0 7 72 345 410 5.41e-12 60.8
Msa0697500 AT4G23230.1 43.478 69 39 0 3 71 355 423 6.67e-12 60.5
Msa0697500 AT4G11530.1 45.588 68 37 0 4 71 371 438 7.84e-12 60.5
Msa0697500 AT4G11460.2 43.478 69 39 0 3 71 289 357 8.33e-12 60.5
Msa0697500 AT4G11460.3 43.478 69 39 0 3 71 364 432 8.41e-12 60.5
Msa0697500 AT4G23280.2 42.029 69 40 0 3 71 360 428 8.54e-12 60.5
Msa0697500 AT4G23280.1 42.029 69 40 0 3 71 362 430 8.54e-12 60.5
Msa0697500 AT4G23200.2 42.029 69 40 0 3 71 354 422 1.01e-11 60.1
Msa0697500 AT4G23200.1 42.029 69 40 0 3 71 354 422 1.04e-11 60.1
Msa0697500 AT1G66910.2 47.692 65 33 1 3 67 363 426 1.09e-11 60.1
Msa0697500 AT4G23310.2 42.029 69 40 0 3 71 486 554 1.11e-11 60.1
Msa0697500 AT4G23310.1 42.029 69 40 0 3 71 526 594 1.12e-11 60.1
Msa0697500 AT1G11340.3 46.774 62 33 0 10 71 608 669 1.33e-11 59.7
Msa0697500 AT1G11340.2 46.774 62 33 0 10 71 608 669 1.34e-11 59.7
Msa0697500 AT3G45420.1 46.377 69 37 0 3 71 368 436 1.56e-11 59.7
Msa0697500 AT1G11340.1 46.774 62 33 0 10 71 540 601 1.72e-11 59.3
Msa0697500 AT4G23130.1 42.029 69 40 0 3 71 358 426 1.88e-11 59.3
Msa0697500 AT4G23130.2 42.029 69 40 0 3 71 362 430 1.88e-11 59.3
Msa0697500 AT4G23130.3 42.029 69 40 0 3 71 362 430 1.93e-11 59.3
Msa0697500 AT5G38240.1 50.000 64 31 1 4 67 354 416 1.93e-11 59.3
Msa0697500 AT5G38240.2 50.000 64 31 1 4 67 336 398 2.00e-11 59.3
Msa0697500 AT1G52290.2 45.312 64 35 0 4 67 162 225 2.04e-11 58.9
Msa0697500 AT1G52290.1 45.312 64 35 0 4 67 162 225 2.14e-11 58.9
Msa0697500 AT5G38240.3 40.385 104 45 5 4 91 290 392 2.17e-11 58.9
Msa0697500 AT3G16030.3 41.791 67 39 0 6 72 569 635 2.39e-11 58.9
Msa0697500 AT3G16030.8 41.791 67 39 0 6 72 569 635 2.39e-11 58.9
Msa0697500 AT3G16030.5 41.791 67 39 0 6 72 569 635 2.39e-11 58.9
Msa0697500 AT4G23140.1 40.580 69 41 0 3 71 369 437 2.52e-11 58.9
Msa0697500 AT4G23140.2 40.580 69 41 0 3 71 369 437 2.52e-11 58.9
Msa0697500 AT4G23160.1 40.580 69 41 0 3 71 377 445 2.52e-11 58.9
Msa0697500 AT4G21400.3 43.284 67 38 0 7 73 371 437 2.76e-11 58.9
Msa0697500 AT3G45410.1 46.377 69 37 0 3 71 360 428 2.80e-11 58.9
Msa0697500 AT1G66910.1 47.692 65 33 1 3 67 366 429 2.94e-11 58.9
Msa0697500 AT4G21380.1 42.424 66 38 0 6 71 547 612 3.05e-11 58.5
Msa0697500 AT4G21410.1 46.154 65 35 0 7 71 254 318 4.53e-11 58.2
Msa0697500 AT4G38830.1 42.254 71 41 0 4 74 363 433 4.83e-11 58.2
Msa0697500 AT4G21410.3 46.154 65 35 0 7 71 379 443 5.55e-11 58.2
Msa0697500 AT5G40380.1 44.118 68 38 0 4 71 334 401 6.09e-11 57.8
Msa0697500 AT4G05200.1 40.000 65 39 0 7 71 369 433 7.21e-11 57.8
Msa0697500 AT4G05200.2 40.000 65 39 0 7 71 387 451 7.22e-11 57.8
Msa0697500 AT4G00970.2 41.538 65 38 0 7 71 366 430 7.24e-11 57.8
Msa0697500 AT4G23220.1 40.909 66 39 0 6 71 357 422 7.34e-11 57.8
Msa0697500 AT5G40380.3 44.118 68 38 0 4 71 334 401 7.47e-11 57.4
Msa0697500 AT4G00970.1 41.538 65 38 0 7 71 366 430 7.49e-11 57.8
Msa0697500 AT5G40380.2 44.118 68 38 0 4 71 334 401 7.59e-11 57.4
Msa0697500 AT3G13690.2 40.580 69 41 0 4 72 430 498 9.64e-11 57.4
Msa0697500 AT3G13690.1 40.580 69 41 0 4 72 430 498 9.64e-11 57.4
Msa0697500 AT3G13690.3 40.580 69 41 0 4 72 430 498 9.64e-11 57.4

Find 16 sgRNAs with CRISPR-Local

Find 23 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCAAGACTCTTGTTCTCT+AGG 0.382645 4_4:+67516779 None:intergenic
AAAATGATATTATACTTGAT+TGG 0.421419 4_4:-67516643 Msa0697500:CDS
ACTTGATTGGTCCACGCGTC+AGG 0.426902 4_4:-67516630 Msa0697500:CDS
CTAGAGAACAAGAGTCTTGA+CGG 0.452253 4_4:-67516778 Msa0697500:CDS
CATTTGTGTGGGCGTTGCAA+AGG 0.463598 4_4:-67516606 Msa0697500:CDS
CTACTTCAAGAATTTGATCA+AGG 0.469666 4_4:-67516916 Msa0697500:CDS
ATTTGTGTGGGCGTTGCAAA+GGG 0.500998 4_4:-67516605 Msa0697500:CDS
TTGTAGGACACACTTGGAGA+TGG 0.507831 4_4:-67516961 Msa0697500:intron
TGTAGGACACACTTGGAGAT+GGG 0.528008 4_4:-67516960 Msa0697500:intron
TTGTATGGATGTTGTATCAA+TGG 0.532046 4_4:-67516829 Msa0697500:CDS
TGGGAGGCTAATTGCTGTGA+AGG 0.551384 4_4:-67516941 Msa0697500:CDS
CACGCGTCAGGACATTTGTG+TGG 0.563192 4_4:-67516618 Msa0697500:CDS
TTGTCTTTGTAGGACACACT+TGG 0.581889 4_4:-67516967 Msa0697500:intron
CACACAAATGTCCTGACGCG+TGG 0.599417 4_4:+67516619 None:intergenic
ACGCGTCAGGACATTTGTGT+GGG 0.613211 4_4:-67516617 Msa0697500:CDS
AGGACACACTTGGAGATGGG+AGG 0.700649 4_4:-67516957 Msa0697500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGATATTATACTTGAT+TGG - chr4_4:67516993-67517012 Msa0697500:intron 15.0%
!! CTTTTACATTTTGTCTTTGT+AGG - chr4_4:67516659-67516678 Msa0697500:intron 25.0%
! AAAAATCTAGTAGACTTGTA+TGG - chr4_4:67516792-67516811 Msa0697500:CDS 25.0%
! TTCTCTATACAAACTAATCA+AGG - chr4_4:67516946-67516965 Msa0697500:CDS 25.0%
! AAACTAATCAAGGATATTGT+TGG - chr4_4:67516956-67516975 Msa0697500:CDS 25.0%
CTACTTCAAGAATTTGATCA+AGG - chr4_4:67516720-67516739 Msa0697500:intron 30.0%
TTGTATGGATGTTGTATCAA+TGG - chr4_4:67516807-67516826 Msa0697500:CDS 30.0%
!!! TATTGTTGGATTGTTTTGAC+AGG - chr4_4:67516970-67516989 Msa0697500:intron 30.0%
TTGTCTTTGTAGGACACACT+TGG - chr4_4:67516669-67516688 Msa0697500:intron 40.0%
CTAGAGAACAAGAGTCTTGA+CGG - chr4_4:67516858-67516877 Msa0697500:CDS 40.0%
TGGGAGGCTAATTGTTGTGA+AGG - chr4_4:67516610-67516629 Msa0697500:CDS 45.0%
TTGTAGGACACACTTGGAGA+TGG - chr4_4:67516675-67516694 Msa0697500:intron 45.0%
TGTAGGACACACTTGGAGAT+GGG - chr4_4:67516676-67516695 Msa0697500:intron 45.0%
CGTCAAGACTCTTGTTCTCT+AGG + chr4_4:67516860-67516879 None:intergenic 45.0%
!! AGTCTTGACGGAGCACTTTT+TGG - chr4_4:67516870-67516889 Msa0697500:CDS 45.0%
! ATTTGTGTGGGCGTTGCAAA+GGG - chr4_4:67517031-67517050 Msa0697500:intron 45.0%
TGGGAGGCTAATTGCTGTGA+AGG - chr4_4:67516695-67516714 Msa0697500:intron 50.0%
ACGCGTCAGGACATTTGTGT+GGG - chr4_4:67517019-67517038 Msa0697500:intron 50.0%
! CATTTGTGTGGGCGTTGCAA+AGG - chr4_4:67517030-67517049 Msa0697500:intron 50.0%
AGGACACACTTGGAGATGGG+AGG - chr4_4:67516679-67516698 Msa0697500:intron 55.0%
! ACTTGATTGGTCCACGCGTC+AGG - chr4_4:67517006-67517025 Msa0697500:intron 55.0%
CACACAAATGTCCTGACGCG+TGG + chr4_4:67517020-67517039 None:intergenic 55.0%
CACGCGTCAGGACATTTGTG+TGG - chr4_4:67517018-67517037 Msa0697500:intron 55.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 67516600 67517058 67516600 ID=Msa0697500;Name=Msa0697500
chr4_4 mRNA 67516600 67517058 67516600 ID=Msa0697500-mRNA-1;Parent=Msa0697500;Name=Msa0697500-mRNA-1;_AED=0.27;_eAED=0.45;_QI=0|0|0|0.66|0.5|0.33|3|0|102
chr4_4 exon 67517056 67517058 67517056 ID=Msa0697500-mRNA-1:exon:19917;Parent=Msa0697500-mRNA-1
chr4_4 exon 67516739 67516977 67516739 ID=Msa0697500-mRNA-1:exon:19916;Parent=Msa0697500-mRNA-1
chr4_4 exon 67516600 67516666 67516600 ID=Msa0697500-mRNA-1:exon:19915;Parent=Msa0697500-mRNA-1
chr4_4 CDS 67517056 67517058 67517056 ID=Msa0697500-mRNA-1:cds;Parent=Msa0697500-mRNA-1
chr4_4 CDS 67516739 67516977 67516739 ID=Msa0697500-mRNA-1:cds;Parent=Msa0697500-mRNA-1
chr4_4 CDS 67516600 67516666 67516600 ID=Msa0697500-mRNA-1:cds;Parent=Msa0697500-mRNA-1
Gene Sequence

>Msa0697500

ATGGACACACTTGGAGATGGGAGGCTAATTGCTGTGAAGGAGCTACTTCAAGAATTTGATCAAGGAATGAATGATTTCGTGAATGAAATTGTAACAATATCGATTGCAAAGCATAAAAATCTAGTAGACTTGTATGGATGTTGTATCAATGGAAGTAAAAGATTCATAGTTTTTGAAAACCTAGAGAACAAGAGTCTTGACGGAGCACTTTTTGGTATGATAATCTTTCTGTCTTTTTGCATGAAAATGATATTATACTTGATTGGTCCACGCGTCAGGACATTTGTGTGGGCGTTGCAAAGGGTTTAG
Protein sequence

>Msa0697500

MDTLGDGRLIAVKELLQEFDQGMNDFVNEIVTISIAKHKNLVDLYGCCINGSKRFIVFENLENKSLDGALFGMIIFLSFCMKMILYLIGPRVRTFVWALQRV*