Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697860 | XP_013457215.2 | 88.860 | 386 | 37 | 3 | 1 | 384 | 1 | 382 | 0.0 | 642 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697860 | A0A396IAU5 | 88.860 | 386 | 37 | 3 | 1 | 384 | 1 | 382 | 0.0 | 642 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0697860 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697860 | MtrunA17_Chr4g0050631 | 88.860 | 386 | 37 | 3 | 1 | 384 | 1 | 382 | 0.0 | 642 |
| Msa0697860 | MtrunA17_Chr4g0050971 | 74.725 | 91 | 20 | 2 | 295 | 382 | 9 | 99 | 1.33e-39 | 136 |
| Msa0697860 | MtrunA17_Chr4g0050651 | 72.826 | 92 | 21 | 3 | 295 | 382 | 9 | 100 | 3.61e-37 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 132 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTCAATTCTCCGATTTA+TGG | 0.116513 | 4_4:+67872603 | Msa0697860:CDS |
| GCTTTCTTCAATTGAGAATT+TGG | 0.178850 | 4_4:+67872725 | Msa0697860:CDS |
| TCAGCTACTTCAGCGGTTTC+AGG | 0.231970 | 4_4:-67876494 | None:intergenic |
| CGATAGTGACGCAGGTTTAA+AGG | 0.242843 | 4_4:-67871932 | None:intergenic |
| TACCTCAGATTTACTCTTCA+TGG | 0.246210 | 4_4:-67876172 | None:intergenic |
| AGAAATTACAAGCTCGAAAA+TGG | 0.249703 | 4_4:-67872090 | None:intergenic |
| TCAGCTACTTCAGCGGATTC+AGG | 0.301044 | 4_4:-67876380 | None:intergenic |
| GCATGAGTGCGATGAGGTTC+AGG | 0.301934 | 4_4:-67876449 | None:intergenic |
| CCGTACTCCGGCAACAGTTC+AGG | 0.302302 | 4_4:+67872657 | Msa0697860:CDS |
| CGCAGGTTTAAAGGCGGTTT+AGG | 0.307176 | 4_4:-67871923 | None:intergenic |
| TATTGTGATGGATGATATTC+AGG | 0.326560 | 4_4:+67872809 | Msa0697860:CDS |
| GTGTGTGCAGAGAGAGAAAA+TGG | 0.354957 | 4_4:-67872047 | None:intergenic |
| ACAGGGGTACGATGAGATTC+AGG | 0.375993 | 4_4:-67876566 | None:intergenic |
| TCAGGAACAATGCGGCTATC+CGG | 0.378472 | 4_4:-67876476 | None:intergenic |
| AGGTTCAGGGGAAGCTGGTT+GGG | 0.378719 | 4_4:-67876435 | None:intergenic |
| GGAACTCTGTCTGAACCATT+TGG | 0.381458 | 4_4:-67876647 | None:intergenic |
| CTGTTCTTTCCTCCTGACAT+TGG | 0.382703 | 4_4:-67872837 | None:intergenic |
| TCAGGAACAATGCGGCTATC+CGG | 0.382821 | 4_4:-67876362 | None:intergenic |
| CTGGACTCATCGTTGTTGAT+TGG | 0.383003 | 4_4:-67872476 | None:intergenic |
| GCGGGAACAAACCTGGCATT+TGG | 0.389416 | 4_4:-67873000 | None:intergenic |
| GCCGAGAACTTCGACGTTAC+CGG | 0.389780 | 4_4:+67872516 | Msa0697860:CDS |
| TGAAGAAGGTTTCCAAGTTA+AGG | 0.391044 | 4_4:+67872388 | Msa0697860:CDS |
| AATCTCATATTTATAGTTTG+CGG | 0.409250 | 4_4:-67871959 | None:intergenic |
| TCCGCTGAAGTAGCTGAATC+TGG | 0.412882 | 4_4:+67876386 | Msa0697860:CDS |
| CTGATGGTGTTGGGATTGAC+AGG | 0.416902 | 4_4:-67876584 | None:intergenic |
| TGCAGAGCATGGGAGGAATC+TGG | 0.420303 | 4_4:+67872960 | Msa0697860:CDS |
| CTCGTTCGAAGTCCTTAACT+TGG | 0.422674 | 4_4:-67872400 | None:intergenic |
| CTTTATTGTGTAGGCACAGA+TGG | 0.423817 | 4_4:+67876301 | Msa0697860:intron |
| GAACTCTGTCTGAACCATTT+GGG | 0.424835 | 4_4:-67876646 | None:intergenic |
| GCGGCGGAGGGTTGAAAACC+TGG | 0.429479 | 4_4:-67872495 | None:intergenic |
| GTCGAAGTTCTCGGCGGCGG+AGG | 0.438031 | 4_4:-67872508 | None:intergenic |
| GCCGGTAACGTCGAAGTTCT+CGG | 0.438838 | 4_4:-67872517 | None:intergenic |
| TCTTCTTCTTCTTCCGGTAG+AGG | 0.439147 | 4_4:+67872882 | Msa0697860:CDS |
| ATTGAGGTTGTCCTCCCAAA+TGG | 0.439687 | 4_4:+67876632 | Msa0697860:CDS |
| TACTTACTGGAGCCATAAAT+CGG | 0.446103 | 4_4:-67872615 | None:intergenic |
| AGATTCAGGCGAAGTTGGTT+GGG | 0.446519 | 4_4:-67876552 | None:intergenic |
| CTTAAACAACACACTCTTCG+AGG | 0.446531 | 4_4:-67872928 | None:intergenic |
| CAGGAACAATGCGGCTATCC+GGG | 0.448018 | 4_4:-67876475 | None:intergenic |
| AACAATGCGGCTATCCGGGC+TGG | 0.449752 | 4_4:-67876471 | None:intergenic |
| CAACCTCAATGCCATCATCC+AGG | 0.452903 | 4_4:-67876619 | None:intergenic |
| CGATGAGATTCAGGCGAAGT+TGG | 0.457573 | 4_4:-67876557 | None:intergenic |
| AGAAGGAGGTTTGCAGAGCA+TGG | 0.460342 | 4_4:+67872949 | Msa0697860:CDS |
| CCTGAACTGTTGCCGGAGTA+CGG | 0.462019 | 4_4:-67872657 | None:intergenic |
| CTCTTCATGGAGAGACGACT+TGG | 0.464197 | 4_4:-67876159 | None:intergenic |
| GAGTGTGTTGTTTAAGAAGG+AGG | 0.464562 | 4_4:+67872935 | Msa0697860:CDS |
| TGACCAGTCGCTGATGGTGT+TGG | 0.464996 | 4_4:-67876594 | None:intergenic |
| CAACTCTCACACTTCTAAAA+CGG | 0.465313 | 4_4:+67871991 | Msa0697860:five_prime_UTR |
| CAGGAACAATGCGGCTATCC+GGG | 0.468329 | 4_4:-67876361 | None:intergenic |
| GAGATTCAGGCGAAGTTGGT+TGG | 0.470052 | 4_4:-67876553 | None:intergenic |
| AGCAAGCTGCGACGGCGAGC+CGG | 0.471289 | 4_4:-67872535 | None:intergenic |
| AGTGTTTGCGGCACTTTGCG+AGG | 0.476892 | 4_4:+67876739 | Msa0697860:CDS |
| GACCAGTCGCTGATGGTGTT+GGG | 0.478745 | 4_4:-67876593 | None:intergenic |
| TCACTGGATTTAGCAGAAAT+CGG | 0.480187 | 4_4:-67872579 | None:intergenic |
| AGCTCGAAAATGGAGATTCA+TGG | 0.482152 | 4_4:-67872080 | None:intergenic |
| GTGTTTGCGGCACTTTGCGA+GGG | 0.482529 | 4_4:+67876740 | Msa0697860:CDS |
| GAGGTTCAGGGGAAGCTGGT+TGG | 0.489551 | 4_4:-67876436 | None:intergenic |
| AAGAAGACTACCAGTGTTTG+CGG | 0.493423 | 4_4:+67876727 | Msa0697860:CDS |
| CGGAGAATTGAATGAGTCAC+TGG | 0.498104 | 4_4:-67872595 | None:intergenic |
| CGATGAGGTTCAGGGGAAGC+TGG | 0.498810 | 4_4:-67876440 | None:intergenic |
| AACGTCGAAGTTCTCGGCGG+CGG | 0.504299 | 4_4:-67872511 | None:intergenic |
| GATGTATCAAACGCCGGTGA+AGG | 0.504339 | 4_4:+67872773 | Msa0697860:CDS |
| GATGAAGCTCTTCTCTTCCG+TGG | 0.504434 | 4_4:-67876137 | None:intergenic |
| GAAGAGTGTGTTGTTTAAGA+AGG | 0.506801 | 4_4:+67872932 | Msa0697860:CDS |
| CATGAGTGCGATGAGGTTCA+GGG | 0.509014 | 4_4:-67876448 | None:intergenic |
| GACTGGTCACCCCTGGATGA+TGG | 0.509897 | 4_4:+67876608 | Msa0697860:CDS |
| CGTACTCCGGCAACAGTTCA+GGG | 0.510086 | 4_4:+67872658 | Msa0697860:CDS |
| GAAGGAGGTTTGCAGAGCAT+GGG | 0.513507 | 4_4:+67872950 | Msa0697860:CDS |
| TCATCCAACTCGATCATCAA+TGG | 0.518876 | 4_4:-67872432 | None:intergenic |
| TCGAAGTTCTCGGCGGCGGA+GGG | 0.523689 | 4_4:-67872507 | None:intergenic |
| CATCAGCGACTGGTCACCCC+TGG | 0.525662 | 4_4:+67876601 | Msa0697860:CDS |
| GGAAGATGAAGAGCCTCTAC+CGG | 0.530743 | 4_4:-67872895 | None:intergenic |
| CTTGCAAGTCTTGTGACTAA+AGG | 0.531988 | 4_4:-67876410 | None:intergenic |
| ATTCAGGTGAGGCCAATGTC+AGG | 0.532076 | 4_4:+67872825 | Msa0697860:CDS |
| ATGAAGCTCTTCTCTTCCGT+GGG | 0.538111 | 4_4:-67876136 | None:intergenic |
| GTTCAGACAGAGTTCCCTCT+AGG | 0.542921 | 4_4:+67876654 | Msa0697860:CDS |
| GGAGGTTTGCAGAGCATGGG+AGG | 0.543989 | 4_4:+67872953 | Msa0697860:CDS |
| TTTATGGCTCCAGTAAGTAC+AGG | 0.546704 | 4_4:+67872619 | Msa0697860:CDS |
| TCATCGCACTCATGCCAGCC+CGG | 0.549587 | 4_4:+67876457 | Msa0697860:CDS |
| CCGCTATGACTCCAAATGCC+AGG | 0.551499 | 4_4:+67872989 | Msa0697860:CDS |
| TTCGCCATTGATGATCGAGT+TGG | 0.551669 | 4_4:+67872428 | Msa0697860:CDS |
| AAGTATTTAGCAAGCTGCGA+CGG | 0.553986 | 4_4:-67872543 | None:intergenic |
| AATGGAGAATGAGAGAAAAG+AGG | 0.555134 | 4_4:-67872029 | None:intergenic |
| CAGGGGTGACCAGTCGCTGA+TGG | 0.559234 | 4_4:-67876600 | None:intergenic |
| AACCTCAATGCCATCATCCA+GGG | 0.561380 | 4_4:-67876618 | None:intergenic |
| CAATCAACAACGATGAGTCC+AGG | 0.566783 | 4_4:+67872477 | Msa0697860:CDS |
| GAACAACAGCAAGATGAAGA+AGG | 0.574444 | 4_4:+67872374 | Msa0697860:CDS |
| TTTATTGTGTAGGCACAGAT+GGG | 0.576808 | 4_4:+67876302 | Msa0697860:intron |
| TACTCCGGCAACAGTTCAGG+GGG | 0.579941 | 4_4:+67872660 | Msa0697860:CDS |
| TCGCAAAGTGCCGCAAACAC+TGG | 0.580686 | 4_4:-67876737 | None:intergenic |
| GCTGAAGTAGCTGAATCAGC+TGG | 0.583047 | 4_4:+67876503 | Msa0697860:CDS |
| AAATTCTCAATTGAAGAAAG+CGG | 0.583951 | 4_4:-67872723 | None:intergenic |
| ACCCCTGGATGATGGCATTG+AGG | 0.584529 | 4_4:+67876616 | Msa0697860:CDS |
| ATGTATCAAACGCCGGTGAA+GGG | 0.585801 | 4_4:+67872774 | Msa0697860:CDS |
| TTCAGACAGAGTTCCCTCTA+GGG | 0.586505 | 4_4:+67876655 | Msa0697860:CDS |
| ACTCTTCGAGGACGAAGAAG+AGG | 0.590723 | 4_4:-67872916 | None:intergenic |
| ATCCCAACACCATCAGCGAC+TGG | 0.592240 | 4_4:+67876591 | Msa0697860:CDS |
| AGCTGATTCAGCTACTTCAG+CGG | 0.593566 | 4_4:-67876501 | None:intergenic |
| ACTTCCTCACCACCCTTCAC+CGG | 0.613181 | 4_4:-67872786 | None:intergenic |
| GCATCAACTTCCTCCCTAGA+GGG | 0.614358 | 4_4:-67876668 | None:intergenic |
| CTCTGTCTGAACCATTTGGG+AGG | 0.615742 | 4_4:-67876643 | None:intergenic |
| CTCCATGAAGAGTAAATCTG+AGG | 0.616657 | 4_4:+67876170 | Msa0697860:CDS |
| AACGCCGGTGAAGGGTGGTG+AGG | 0.621390 | 4_4:+67872782 | Msa0697860:CDS |
| TGCATCAACTTCCTCCCTAG+AGG | 0.621656 | 4_4:-67876669 | None:intergenic |
| TGTTTGCGGCACTTTGCGAG+GGG | 0.624671 | 4_4:+67876741 | Msa0697860:CDS |
| AGGACTGTGCTTGTATGACC+CGG | 0.627217 | 4_4:+67876343 | Msa0697860:CDS |
| GCTTCAATGAAATACTAATG+CGG | 0.627819 | 4_4:+67871896 | None:intergenic |
| TATCAAACGCCGGTGAAGGG+TGG | 0.628960 | 4_4:+67872777 | Msa0697860:CDS |
| TGGTGAGGAAGTTATTGTGA+TGG | 0.633081 | 4_4:+67872797 | Msa0697860:CDS |
| TCCAGATTCAGCTACTTCAG+CGG | 0.639551 | 4_4:-67876387 | None:intergenic |
| AGACAGAGTTCCCTCTAGGG+AGG | 0.648644 | 4_4:+67876658 | Msa0697860:CDS |
| TGATGGTGTTGGGATTGACA+GGG | 0.653379 | 4_4:-67876583 | None:intergenic |
| GTACTCCGGCAACAGTTCAG+GGG | 0.653779 | 4_4:+67872659 | Msa0697860:CDS |
| ACCTCAATGCCATCATCCAG+GGG | 0.662406 | 4_4:-67876617 | None:intergenic |
| GCCGCGGATGTATCAAACGC+CGG | 0.663612 | 4_4:+67872767 | Msa0697860:CDS |
| AATAATAGCTTCAGTTCTCG+CGG | 0.664385 | 4_4:+67872684 | Msa0697860:CDS |
| ATGAGTGCGATGAGGTTCAG+GGG | 0.671572 | 4_4:-67876447 | None:intergenic |
| GCGGAACACGATAGTGACGC+AGG | 0.672330 | 4_4:-67871940 | None:intergenic |
| GGGCTGGCATGAGTGCGATG+AGG | 0.673771 | 4_4:-67876455 | None:intergenic |
| CAGGTGAGGCCAATGTCAGG+AGG | 0.674041 | 4_4:+67872828 | Msa0697860:CDS |
| ACCGGCGTTTGATACATCCG+CGG | 0.676422 | 4_4:-67872768 | None:intergenic |
| AGAAGCAGCTCTCGTCGCCG+CGG | 0.683033 | 4_4:+67872751 | Msa0697860:CDS |
| GAACTGTTGCCGGAGTACGG+TGG | 0.688179 | 4_4:-67872654 | None:intergenic |
| TAGTGACGCAGGTTTAAAGG+CGG | 0.705322 | 4_4:-67871929 | None:intergenic |
| GATGGTGTTGGGATTGACAG+GGG | 0.706471 | 4_4:-67876582 | None:intergenic |
| CCTGGCATTTGGAGTCATAG+CGG | 0.709847 | 4_4:-67872989 | None:intergenic |
| ATCGAGTTGGATGATAACAG+AGG | 0.715067 | 4_4:+67872441 | Msa0697860:CDS |
| CAGCGGTTTCAGGAACAATG+CGG | 0.725745 | 4_4:-67876484 | None:intergenic |
| TCGAAAATGGAGATTCATGG+CGG | 0.728944 | 4_4:-67872077 | None:intergenic |
| TGATGGATGATATTCAGGTG+AGG | 0.744981 | 4_4:+67872814 | Msa0697860:CDS |
| CAGCGGATTCAGGAACAATG+CGG | 0.756023 | 4_4:-67876370 | None:intergenic |
| GGTAACGTCGAAGTTCTCGG+CGG | 0.777146 | 4_4:-67872514 | None:intergenic |
| ACTCCGGCAACAGTTCAGGG+GGG | 0.786022 | 4_4:+67872661 | Msa0697860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAACTTTTGATTTTATTT+AGG | + | chr4_4:67873142-67873161 | Msa0697860:intron | 10.0% |
| !!! | AAAACTTTTGATTTTATTTA+GGG | + | chr4_4:67873143-67873162 | Msa0697860:intron | 10.0% |
| !! | TATCTTATTAAATTTGATAT+AGG | - | chr4_4:67874713-67874732 | None:intergenic | 10.0% |
| !! | TACAACTTATTAAAATTATT+TGG | + | chr4_4:67875462-67875481 | Msa0697860:intron | 10.0% |
| !!! | TTTATCTTTTGTTATAAAAA+TGG | + | chr4_4:67875491-67875510 | Msa0697860:intron | 10.0% |
| !! | AAATTAAGTAAATAAAAAAG+TGG | + | chr4_4:67875670-67875689 | Msa0697860:intron | 10.0% |
| !!! | AGAATTTTATTCATCTTAAT+TGG | + | chr4_4:67873119-67873138 | Msa0697860:intron | 15.0% |
| !!! | TAATGGAATATTTCTATTTT+AGG | - | chr4_4:67873208-67873227 | None:intergenic | 15.0% |
| !! | TAAGAAAGAATATATTAAGA+TGG | + | chr4_4:67874162-67874181 | Msa0697860:intron | 15.0% |
| !! | GATGATTGTAATTAAAATTT+GGG | - | chr4_4:67874581-67874600 | None:intergenic | 15.0% |
| !! | TGATGATTGTAATTAAAATT+TGG | - | chr4_4:67874582-67874601 | None:intergenic | 15.0% |
| !! | ATAGAACAAATTTAAATCAT+TGG | + | chr4_4:67874768-67874787 | Msa0697860:intron | 15.0% |
| !! | TGTCTATTTAAATTAGAATT+AGG | - | chr4_4:67874816-67874835 | None:intergenic | 15.0% |
| !! | TAAAGAAAATTAAGAAGTAA+AGG | - | chr4_4:67874957-67874976 | None:intergenic | 15.0% |
| !!! | TATGATTAAGATAATTTTTG+TGG | + | chr4_4:67875888-67875907 | Msa0697860:intron | 15.0% |
| !! | AATCTCATATTTATAGTTTG+CGG | - | chr4_4:67871962-67871981 | None:intergenic | 20.0% |
| !! | AATTGAAATCAAAATAGAGA+AGG | - | chr4_4:67872137-67872156 | None:intergenic | 20.0% |
| !! | CATTGAATTCATAATAGTTA+TGG | - | chr4_4:67873025-67873044 | None:intergenic | 20.0% |
| !! | ATAAATATTCCATTTCCATT+AGG | + | chr4_4:67873452-67873471 | Msa0697860:intron | 20.0% |
| !!! | TTTTAGATTTAGCATTTGTT+TGG | + | chr4_4:67873699-67873718 | Msa0697860:intron | 20.0% |
| !!! | AACGAAAATAGATTGTATTT+TGG | + | chr4_4:67874842-67874861 | Msa0697860:intron | 20.0% |
| !! | ATTTAACCATTTATCCAAAT+AGG | + | chr4_4:67875562-67875581 | Msa0697860:intron | 20.0% |
| !! | AAGTCAATAATATCTTATAC+AGG | - | chr4_4:67876040-67876059 | None:intergenic | 20.0% |
| !!! | TAAGATATTATTGACTTCTA+TGG | + | chr4_4:67876043-67876062 | Msa0697860:intron | 20.0% |
| ! | CTCTTCAATCAATTGAAATT+AGG | + | chr4_4:67872192-67872211 | Msa0697860:intron | 25.0% |
| !! | ATTACGTGATTTTCATTTCT+TGG | - | chr4_4:67872294-67872313 | None:intergenic | 25.0% |
| ! | AAATTCTCAATTGAAGAAAG+CGG | - | chr4_4:67872726-67872745 | None:intergenic | 25.0% |
| ! | TGAATTCATAATAGTTATGG+CGG | - | chr4_4:67873022-67873041 | None:intergenic | 25.0% |
| !! | AATTCAATGATTCCTGTTTT+TGG | + | chr4_4:67873036-67873055 | Msa0697860:intron | 25.0% |
| ! | GTTGAATGCACAAATATTAA+TGG | - | chr4_4:67873225-67873244 | None:intergenic | 25.0% |
| !! | TCAATGTAGAAACTTTTTGT+TGG | - | chr4_4:67873286-67873305 | None:intergenic | 25.0% |
| ! | ATGCACTTAATAGTTAATAC+AGG | - | chr4_4:67873350-67873369 | None:intergenic | 25.0% |
| ! | TTAACTATTAAGTGCATGTT+TGG | + | chr4_4:67873353-67873372 | Msa0697860:intron | 25.0% |
| !!! | TAGTAAATTTGCTGAAATCA+CGG | - | chr4_4:67873412-67873431 | None:intergenic | 25.0% |
| !!! | AAATTGTGTTTTAGTCCTTT+GGG | - | chr4_4:67873503-67873522 | None:intergenic | 25.0% |
| ! | TAAAACACAATTTGCAAACA+AGG | + | chr4_4:67873510-67873529 | Msa0697860:intron | 25.0% |
| ! | AAAACACAATTTGCAAACAA+GGG | + | chr4_4:67873511-67873530 | Msa0697860:intron | 25.0% |
| !! | TTAGCATTTGTTTGGAATTA+CGG | + | chr4_4:67873707-67873726 | Msa0697860:intron | 25.0% |
| ! | CAAACAAACTGACTATAAAT+TGG | + | chr4_4:67874038-67874057 | Msa0697860:intron | 25.0% |
| !! | TCACAAGTTTCTTGTTTAAT+TGG | + | chr4_4:67874243-67874262 | Msa0697860:intron | 25.0% |
| !! | CACAAGTTTCTTGTTTAATT+GGG | + | chr4_4:67874244-67874263 | Msa0697860:intron | 25.0% |
| ! | AAATCAGAATAACCTATACA+TGG | - | chr4_4:67874302-67874321 | None:intergenic | 25.0% |
| !! | TGTATAGGTTATTCTGATTT+TGG | + | chr4_4:67874302-67874321 | Msa0697860:intron | 25.0% |
| !! | GTATAGGTTATTCTGATTTT+GGG | + | chr4_4:67874303-67874322 | Msa0697860:intron | 25.0% |
| !!! | TTGTTTTTGGGAAAGTAATT+TGG | - | chr4_4:67874363-67874382 | None:intergenic | 25.0% |
| ! | AAATTACTTTCCCAAAAACA+AGG | + | chr4_4:67874362-67874381 | Msa0697860:intron | 25.0% |
| !!! | TGTTGTTTCATTATAAACCT+AGG | + | chr4_4:67874386-67874405 | Msa0697860:intron | 25.0% |
| !! | ATTTCATGGAGCAATAATTT+TGG | + | chr4_4:67874463-67874482 | Msa0697860:intron | 25.0% |
| ! | AGATTCTTAATCAAACTATC+TGG | - | chr4_4:67875184-67875203 | None:intergenic | 25.0% |
| ! | GATAGTTTGATTAAGAATCT+TGG | + | chr4_4:67875184-67875203 | Msa0697860:intron | 25.0% |
| ! | TCTGTAGAATTGTATATTGA+GGG | + | chr4_4:67875268-67875287 | Msa0697860:intron | 25.0% |
| ! | ACTTATAGCATAAGTTCTTA+TGG | - | chr4_4:67875537-67875556 | None:intergenic | 25.0% |
| ! | AATTACATGTAACAGAATGT+CGG | - | chr4_4:67875925-67875944 | None:intergenic | 25.0% |
| ! | TTAGGTGTTTATTATGCTTA+AGG | - | chr4_4:67876227-67876246 | None:intergenic | 25.0% |
| ! | CATAATAAACACCTAATTAG+CGG | + | chr4_4:67876231-67876250 | Msa0697860:intron | 25.0% |
| AGAAATTACAAGCTCGAAAA+TGG | - | chr4_4:67872093-67872112 | None:intergenic | 30.0% | |
| AGAAGGTTGAAAATTGATAG+AGG | - | chr4_4:67872120-67872139 | None:intergenic | 30.0% | |
| !!! | TCGTTTTGATTTTCTTTTCC+TGG | + | chr4_4:67872157-67872176 | Msa0697860:intron | 30.0% |
| TCATTCAATTCTCCGATTTA+TGG | + | chr4_4:67872603-67872622 | Msa0697860:CDS | 30.0% | |
| GCTTTCTTCAATTGAGAATT+TGG | + | chr4_4:67872725-67872744 | Msa0697860:CDS | 30.0% | |
| !! | TATTGTGATGGATGATATTC+AGG | + | chr4_4:67872809-67872828 | Msa0697860:CDS | 30.0% |
| GAATTCATAATAGTTATGGC+GGG | - | chr4_4:67873021-67873040 | None:intergenic | 30.0% | |
| GTGATTTCAGCAAATTTACT+AGG | + | chr4_4:67873411-67873430 | Msa0697860:intron | 30.0% | |
| TTTAAACAACTACAGCCTAA+TGG | - | chr4_4:67873470-67873489 | None:intergenic | 30.0% | |
| ATTAGGCTGTAGTTGTTTAA+AGG | + | chr4_4:67873469-67873488 | Msa0697860:intron | 30.0% | |
| !!! | CAAATTGTGTTTTAGTCCTT+TGG | - | chr4_4:67873504-67873523 | None:intergenic | 30.0% |
| ! | ACTATTTAGAGACCTTTTCT+TGG | + | chr4_4:67873554-67873573 | Msa0697860:intron | 30.0% |
| ! | CTATTTAGAGACCTTTTCTT+GGG | + | chr4_4:67873555-67873574 | Msa0697860:intron | 30.0% |
| ! | AAATTGCGTTTAGAAAGCAT+TGG | + | chr4_4:67873785-67873804 | Msa0697860:intron | 30.0% |
| !! | AATTGCGTTTAGAAAGCATT+GGG | + | chr4_4:67873786-67873805 | Msa0697860:intron | 30.0% |
| GATCATATATCGCACTTTAT+AGG | - | chr4_4:67873880-67873899 | None:intergenic | 30.0% | |
| TGGTTGTCTTAAAAATTACG+AGG | + | chr4_4:67874182-67874201 | Msa0697860:intron | 30.0% | |
| ! | TTGGGAAAGTAATTTGGTTT+GGG | - | chr4_4:67874357-67874376 | None:intergenic | 30.0% |
| TTTGGGAAAGTAATTTGGTT+TGG | - | chr4_4:67874358-67874377 | None:intergenic | 30.0% | |
| !!! | GAAACAACAACCTTGTTTTT+GGG | - | chr4_4:67874375-67874394 | None:intergenic | 30.0% |
| !!! | TGAAACAACAACCTTGTTTT+TGG | - | chr4_4:67874376-67874395 | None:intergenic | 30.0% |
| !! | TAGATCTTTTGAGTCCATAT+GGG | - | chr4_4:67874644-67874663 | None:intergenic | 30.0% |
| !! | TTAGATCTTTTGAGTCCATA+TGG | - | chr4_4:67874645-67874664 | None:intergenic | 30.0% |
| GTATAGAACTATAGATGTCA+AGG | - | chr4_4:67874980-67874999 | None:intergenic | 30.0% | |
| !! | GTTGGTTTCTTTTCGTTTTT+TGG | + | chr4_4:67875030-67875049 | Msa0697860:intron | 30.0% |
| TTAACCAGACTATGATACTA+GGG | + | chr4_4:67875145-67875164 | Msa0697860:intron | 30.0% | |
| CTCTGTAGAATTGTATATTG+AGG | + | chr4_4:67875267-67875286 | Msa0697860:intron | 30.0% | |
| TTGTATATTGAGGGTCTATT+TGG | + | chr4_4:67875277-67875296 | Msa0697860:intron | 30.0% | |
| TGTAGTTATGCAGAATTCTA+TGG | + | chr4_4:67875374-67875393 | Msa0697860:intron | 30.0% | |
| TTAGGTCCTATTTGGATAAA+TGG | - | chr4_4:67875571-67875590 | None:intergenic | 30.0% | |
| TTCAACATTTAGGTCCTATT+TGG | - | chr4_4:67875579-67875598 | None:intergenic | 30.0% | |
| TATCCAGCAATTCAACATTT+AGG | - | chr4_4:67875589-67875608 | None:intergenic | 30.0% | |
| AAAAAGTGGCATAGAATGAT+AGG | + | chr4_4:67875684-67875703 | Msa0697860:intron | 30.0% | |
| AAAAGTGGCATAGAATGATA+GGG | + | chr4_4:67875685-67875704 | Msa0697860:intron | 30.0% | |
| ATGACACTGTAACTAATTGA+TGG | + | chr4_4:67875768-67875787 | Msa0697860:intron | 30.0% | |
| ACATTACAGTTAGTGAGTTA+TGG | + | chr4_4:67875802-67875821 | Msa0697860:intron | 30.0% | |
| !! | AGTTAGTTGTTTGTTGTGTT+AGG | + | chr4_4:67875826-67875845 | Msa0697860:intron | 30.0% |
| TGTGTTAGGCTTTCTATATA+AGG | + | chr4_4:67875840-67875859 | Msa0697860:intron | 30.0% | |
| GTGTTAGGCTTTCTATATAA+GGG | + | chr4_4:67875841-67875860 | Msa0697860:intron | 30.0% | |
| TTCTATATAAGGGAGTCATA+AGG | + | chr4_4:67875851-67875870 | Msa0697860:intron | 30.0% | |
| ATCTTATCACAGAACATCTA+TGG | + | chr4_4:67875995-67876014 | Msa0697860:intron | 30.0% | |
| GTTTATTATGCTTAAGGACA+AGG | - | chr4_4:67876221-67876240 | None:intergenic | 30.0% | |
| GAAATACTTAACCGCTAATT+AGG | - | chr4_4:67876245-67876264 | None:intergenic | 30.0% | |
| GCATTTCTTCTTTATTGTGT+AGG | + | chr4_4:67876292-67876311 | Msa0697860:intron | 30.0% | |
| !!! | GAAGTTGATGCATACATTTT+TGG | + | chr4_4:67876680-67876699 | Msa0697860:CDS | 30.0% |
| ! | CAACTCTCACACTTCTAAAA+CGG | + | chr4_4:67871991-67872010 | Msa0697860:five_prime_UTR | 35.0% |
| AATGGAGAATGAGAGAAAAG+AGG | - | chr4_4:67872032-67872051 | None:intergenic | 35.0% | |
| ! | GAAGAGAACGAAAATTTTCC+AGG | - | chr4_4:67872178-67872197 | None:intergenic | 35.0% |
| TGAAGAAGGTTTCCAAGTTA+AGG | + | chr4_4:67872388-67872407 | Msa0697860:CDS | 35.0% | |
| TCACTGGATTTAGCAGAAAT+CGG | - | chr4_4:67872582-67872601 | None:intergenic | 35.0% | |
| TACTTACTGGAGCCATAAAT+CGG | - | chr4_4:67872618-67872637 | None:intergenic | 35.0% | |
| ! | TTTTGCTAACCTGTACTTAC+TGG | - | chr4_4:67872631-67872650 | None:intergenic | 35.0% |
| AATAATAGCTTCAGTTCTCG+CGG | + | chr4_4:67872684-67872703 | Msa0697860:CDS | 35.0% | |
| TCTTCTTCTTCTTCTTCTTC+CGG | + | chr4_4:67872870-67872889 | Msa0697860:CDS | 35.0% | |
| !! | GAAGAGTGTGTTGTTTAAGA+AGG | + | chr4_4:67872932-67872951 | Msa0697860:CDS | 35.0% |
| TTGCATCAAAAGCCAAAAAC+AGG | - | chr4_4:67873051-67873070 | None:intergenic | 35.0% | |
| CACAAATACAACCCAAGAAA+AGG | - | chr4_4:67873569-67873588 | None:intergenic | 35.0% | |
| ! | AGTAGTTCATTTTGTCCTGA+TGG | + | chr4_4:67873646-67873665 | Msa0697860:intron | 35.0% |
| ! | GTAGTTCATTTTGTCCTGAT+GGG | + | chr4_4:67873647-67873666 | Msa0697860:intron | 35.0% |
| TATCGCACTTTATAGGTGTT+TGG | - | chr4_4:67873873-67873892 | None:intergenic | 35.0% | |
| ATATCGTAATGCGTGTTCAA+AGG | - | chr4_4:67873948-67873967 | None:intergenic | 35.0% | |
| TGTAAGAGTAAAGTTCTCTC+CGG | - | chr4_4:67873972-67873991 | None:intergenic | 35.0% | |
| !! | AGGTTATTCTGATTTTGGGA+TGG | + | chr4_4:67874307-67874326 | Msa0697860:intron | 35.0% |
| !!! | GGTTATTCTGATTTTGGGAT+GGG | + | chr4_4:67874308-67874327 | Msa0697860:intron | 35.0% |
| ATAGGATGAAACAACAACCT+AGG | - | chr4_4:67874406-67874425 | None:intergenic | 35.0% | |
| !! | CATAGCATTCATTCTAGGAT+AGG | - | chr4_4:67874424-67874443 | None:intergenic | 35.0% |
| TCGTTCATAGCATTCATTCT+AGG | - | chr4_4:67874429-67874448 | None:intergenic | 35.0% | |
| ATTGCTCCATGAAATTAACC+AGG | - | chr4_4:67874458-67874477 | None:intergenic | 35.0% | |
| TAATATATGGGTACCCCATA+TGG | + | chr4_4:67874627-67874646 | Msa0697860:intron | 35.0% | |
| !! | AGATCTTTTGAGTCCATATG+GGG | - | chr4_4:67874643-67874662 | None:intergenic | 35.0% |
| TGAAAACTGTCTCCTTGAAT+TGG | - | chr4_4:67874903-67874922 | None:intergenic | 35.0% | |
| ! | TCTATAGTTCTATACGCAGT+TGG | + | chr4_4:67874985-67875004 | Msa0697860:intron | 35.0% |
| ! | CTATAGTTCTATACGCAGTT+GGG | + | chr4_4:67874986-67875005 | Msa0697860:intron | 35.0% |
| TTGAATTCTGCAATCTCTGT+TGG | + | chr4_4:67875012-67875031 | Msa0697860:intron | 35.0% | |
| ! | TTGGTTCCTTTTAGTGCATA+AGG | + | chr4_4:67875049-67875068 | Msa0697860:intron | 35.0% |
| GACATTCCTTATGCACTAAA+AGG | - | chr4_4:67875058-67875077 | None:intergenic | 35.0% | |
| GTTAACCAGACTATGATACT+AGG | + | chr4_4:67875144-67875163 | Msa0697860:intron | 35.0% | |
| TAAGCACCTGTAAAACTGTT+TGG | + | chr4_4:67875329-67875348 | Msa0697860:intron | 35.0% | |
| AAGCACCTGTAAAACTGTTT+GGG | + | chr4_4:67875330-67875349 | Msa0697860:intron | 35.0% | |
| TTATTTCCATTTGCGCTCAA+TGG | + | chr4_4:67875420-67875439 | Msa0697860:intron | 35.0% | |
| !! | ACTGCTTGTTGATTTCTGAA+TGG | + | chr4_4:67875608-67875627 | Msa0697860:intron | 35.0% |
| !! | CTGCTTGTTGATTTCTGAAT+GGG | + | chr4_4:67875609-67875628 | Msa0697860:intron | 35.0% |
| !! | TGCTTGTTGATTTCTGAATG+GGG | + | chr4_4:67875610-67875629 | Msa0697860:intron | 35.0% |
| TACATTTGGATGCTAGAGTT+TGG | + | chr4_4:67875640-67875659 | Msa0697860:intron | 35.0% | |
| AAAGTGGCATAGAATGATAG+GGG | + | chr4_4:67875686-67875705 | Msa0697860:intron | 35.0% | |
| CAACTGTATACCTTCCTAAT+AGG | - | chr4_4:67875722-67875741 | None:intergenic | 35.0% | |
| ! | CTATTAGGAAGGTATACAGT+TGG | + | chr4_4:67875720-67875739 | Msa0697860:intron | 35.0% |
| GTCATAAGGTTAGTAGTAGA+AGG | + | chr4_4:67875865-67875884 | Msa0697860:intron | 35.0% | |
| ! | AGATAATTTTTGTGGAGTCC+AGG | + | chr4_4:67875896-67875915 | Msa0697860:intron | 35.0% |
| TACCTCAGATTTACTCTTCA+TGG | - | chr4_4:67876175-67876194 | None:intergenic | 35.0% | |
| TTTATTGTGTAGGCACAGAT+GGG | + | chr4_4:67876302-67876321 | Msa0697860:intron | 35.0% | |
| TCGAAAATGGAGATTCATGG+CGG | - | chr4_4:67872080-67872099 | None:intergenic | 40.0% | |
| AGCTCGAAAATGGAGATTCA+TGG | - | chr4_4:67872083-67872102 | None:intergenic | 40.0% | |
| ! | CGTTTTTGACATGCAGGAAT+TGG | + | chr4_4:67872344-67872363 | Msa0697860:intron | 40.0% |
| GAACAACAGCAAGATGAAGA+AGG | + | chr4_4:67872374-67872393 | Msa0697860:CDS | 40.0% | |
| TCATCCAACTCGATCATCAA+TGG | - | chr4_4:67872435-67872454 | None:intergenic | 40.0% | |
| !! | ATCGAGTTGGATGATAACAG+AGG | + | chr4_4:67872441-67872460 | Msa0697860:CDS | 40.0% |
| AAGTATTTAGCAAGCTGCGA+CGG | - | chr4_4:67872546-67872565 | None:intergenic | 40.0% | |
| TTTATGGCTCCAGTAAGTAC+AGG | + | chr4_4:67872619-67872638 | Msa0697860:CDS | 40.0% | |
| TGGTGAGGAAGTTATTGTGA+TGG | + | chr4_4:67872797-67872816 | Msa0697860:CDS | 40.0% | |
| ! | TGATGGATGATATTCAGGTG+AGG | + | chr4_4:67872814-67872833 | Msa0697860:CDS | 40.0% |
| CTTAAACAACACACTCTTCG+AGG | - | chr4_4:67872931-67872950 | None:intergenic | 40.0% | |
| !! | GAGTGTGTTGTTTAAGAAGG+AGG | + | chr4_4:67872935-67872954 | Msa0697860:CDS | 40.0% |
| !! | TCTTGTTAACTTGTGCCCTA+AGG | + | chr4_4:67873166-67873185 | Msa0697860:intron | 40.0% |
| !! | CTTGTTAACTTGTGCCCTAA+GGG | + | chr4_4:67873167-67873186 | Msa0697860:intron | 40.0% |
| TTGCTTAACATGTGCCCTTA+GGG | - | chr4_4:67873184-67873203 | None:intergenic | 40.0% | |
| ATTGCTTAACATGTGCCCTT+AGG | - | chr4_4:67873185-67873204 | None:intergenic | 40.0% | |
| !! | ACTCATTAACTTGTGCCTTG+AGG | + | chr4_4:67873305-67873324 | Msa0697860:intron | 40.0% |
| !! | CTCATTAACTTGTGCCTTGA+GGG | + | chr4_4:67873306-67873325 | Msa0697860:intron | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | - | chr4_4:67873323-67873342 | None:intergenic | 40.0% |
| ! | CTATAGCTTTTGCCAAATCC+CGG | + | chr4_4:67873379-67873398 | Msa0697860:intron | 40.0% |
| CAACTACAGCCTAATGGAAA+TGG | - | chr4_4:67873464-67873483 | None:intergenic | 40.0% | |
| AGGCTGTAGTTGTTTAAAGG+AGG | + | chr4_4:67873472-67873491 | Msa0697860:intron | 40.0% | |
| TTAAAGGAGGATTGTCCCAA+AGG | + | chr4_4:67873485-67873504 | Msa0697860:intron | 40.0% | |
| GGCATAAATAATGTCCCATC+AGG | - | chr4_4:67873664-67873683 | None:intergenic | 40.0% | |
| CTAAAACAATCGCGCATTAG+AGG | - | chr4_4:67873685-67873704 | None:intergenic | 40.0% | |
| ! | GCATTTGTTTGGAATTACGG+CGG | + | chr4_4:67873710-67873729 | Msa0697860:intron | 40.0% |
| ! | CATTTGTTTGGAATTACGGC+GGG | + | chr4_4:67873711-67873730 | Msa0697860:intron | 40.0% |
| ! | TTTCTAGTCAATCGCGCATT+AGG | - | chr4_4:67873744-67873763 | None:intergenic | 40.0% |
| !! | GGATGCTTTACTGACTTGTT+TGG | - | chr4_4:67873840-67873859 | None:intergenic | 40.0% |
| TAGGTGTTTGGACACAGATA+AGG | - | chr4_4:67873861-67873880 | None:intergenic | 40.0% | |
| !! | AATGCGTGTTCAAAGGTGTT+TGG | - | chr4_4:67873941-67873960 | None:intergenic | 40.0% |
| GAACACGCATTACGATATAC+CGG | + | chr4_4:67873950-67873969 | Msa0697860:intron | 40.0% | |
| GACTATAAATTGGACCATCC+TGG | + | chr4_4:67874048-67874067 | Msa0697860:intron | 40.0% | |
| AGGTGCGATGATTTACTTCA+CGG | - | chr4_4:67874094-67874113 | None:intergenic | 40.0% | |
| GAAGTAAATCATCGCACCTA+CGG | + | chr4_4:67874095-67874114 | Msa0697860:intron | 40.0% | |
| CTTGTTTAATTGGGCCAGAT+AGG | + | chr4_4:67874253-67874272 | Msa0697860:intron | 40.0% | |
| ! | CTGGTAGTGATTCCATGTAT+AGG | + | chr4_4:67874287-67874306 | Msa0697860:intron | 40.0% |
| CTGCAACCTGGTTAATTTCA+TGG | + | chr4_4:67874449-67874468 | Msa0697860:intron | 40.0% | |
| TGGTATGATTCGCCTGATAT+TGG | + | chr4_4:67874483-67874502 | Msa0697860:intron | 40.0% | |
| ATCACTGAGATGCCAATATC+AGG | - | chr4_4:67874498-67874517 | None:intergenic | 40.0% | |
| AAACTGTCTCCTTGAATTGG+TGG | - | chr4_4:67874900-67874919 | None:intergenic | 40.0% | |
| ! | AAGGAGACAGTTTTCACACA+AGG | + | chr4_4:67874907-67874926 | Msa0697860:intron | 40.0% |
| ! | GACAGTTTTCACACAAGGTT+TGG | + | chr4_4:67874912-67874931 | Msa0697860:intron | 40.0% |
| ! | TGAGTCTTTGTTGTCATTGC+TGG | + | chr4_4:67875111-67875130 | Msa0697860:intron | 40.0% |
| CAATTCTACAGAGAGAGAGT+CGG | - | chr4_4:67875260-67875279 | None:intergenic | 40.0% | |
| AAACTACCATTGAGCGCAAA+TGG | - | chr4_4:67875429-67875448 | None:intergenic | 40.0% | |
| GGACCTAAATGTTGAATTGC+TGG | + | chr4_4:67875583-67875602 | Msa0697860:intron | 40.0% | |
| TGATTTCTGAATGGGGAATG+TGG | + | chr4_4:67875617-67875636 | Msa0697860:intron | 40.0% | |
| AATGGGGAATGTGGTACATT+TGG | + | chr4_4:67875626-67875645 | Msa0697860:intron | 40.0% | |
| ACTAGGATCTCCTATTAGGA+AGG | + | chr4_4:67875709-67875728 | Msa0697860:intron | 40.0% | |
| ! | TTAGGAAGGTATACAGTTGG+AGG | + | chr4_4:67875723-67875742 | Msa0697860:intron | 40.0% |
| ! | TAGGAAGGTATACAGTTGGA+GGG | + | chr4_4:67875724-67875743 | Msa0697860:intron | 40.0% |
| ! | ATCCTTTTACAGTTTGCCCA+CGG | + | chr4_4:67876120-67876139 | Msa0697860:intron | 40.0% |
| CTCCATGAAGAGTAAATCTG+AGG | + | chr4_4:67876170-67876189 | Msa0697860:CDS | 40.0% | |
| CTTTATTGTGTAGGCACAGA+TGG | + | chr4_4:67876301-67876320 | Msa0697860:intron | 40.0% | |
| ! | CTTGCAAGTCTTGTGACTAA+AGG | - | chr4_4:67876413-67876432 | None:intergenic | 40.0% |
| !! | CTTGCAAGTTTTGTGACTAC+AGG | - | chr4_4:67876530-67876549 | None:intergenic | 40.0% |
| GAACTCTGTCTGAACCATTT+GGG | - | chr4_4:67876649-67876668 | None:intergenic | 40.0% | |
| ! | GGTAGTCTTCTTTTAGTGGT+CGG | - | chr4_4:67876719-67876738 | None:intergenic | 40.0% |
| ! | CACTGGTAGTCTTCTTTTAG+TGG | - | chr4_4:67876723-67876742 | None:intergenic | 40.0% |
| AAGAAGACTACCAGTGTTTG+CGG | + | chr4_4:67876727-67876746 | Msa0697860:CDS | 40.0% | |
| TAGTGACGCAGGTTTAAAGG+CGG | - | chr4_4:67871932-67871951 | None:intergenic | 45.0% | |
| CGATAGTGACGCAGGTTTAA+AGG | - | chr4_4:67871935-67871954 | None:intergenic | 45.0% | |
| GTGTGTGCAGAGAGAGAAAA+TGG | - | chr4_4:67872050-67872069 | None:intergenic | 45.0% | |
| ACGAAGCTCGAATCACGATT+CGG | - | chr4_4:67872327-67872346 | None:intergenic | 45.0% | |
| !! | GAGCTTCGTTTTTGACATGC+AGG | + | chr4_4:67872338-67872357 | Msa0697860:intron | 45.0% |
| CTCGTTCGAAGTCCTTAACT+TGG | - | chr4_4:67872403-67872422 | None:intergenic | 45.0% | |
| ! | TTCGCCATTGATGATCGAGT+TGG | + | chr4_4:67872428-67872447 | Msa0697860:CDS | 45.0% |
| CTGGACTCATCGTTGTTGAT+TGG | - | chr4_4:67872479-67872498 | None:intergenic | 45.0% | |
| CAATCAACAACGATGAGTCC+AGG | + | chr4_4:67872477-67872496 | Msa0697860:CDS | 45.0% | |
| CGGAGAATTGAATGAGTCAC+TGG | - | chr4_4:67872598-67872617 | None:intergenic | 45.0% | |
| ATGTATCAAACGCCGGTGAA+GGG | + | chr4_4:67872774-67872793 | Msa0697860:CDS | 45.0% | |
| CTGTTCTTTCCTCCTGACAT+TGG | - | chr4_4:67872840-67872859 | None:intergenic | 45.0% | |
| TCTTCTTCTTCTTCCGGTAG+AGG | + | chr4_4:67872882-67872901 | Msa0697860:CDS | 45.0% | |
| TGACGTCACGACTCCAATAA+GGG | + | chr4_4:67873595-67873614 | Msa0697860:intron | 45.0% | |
| CCAGACACATACACCCTTAT+TGG | - | chr4_4:67873611-67873630 | None:intergenic | 45.0% | |
| ! | CCAATAAGGGTGTATGTGTC+TGG | + | chr4_4:67873608-67873627 | Msa0697860:intron | 45.0% |
| CGTTGCGACAAAATTTCTCG+CGG | - | chr4_4:67873812-67873831 | None:intergenic | 45.0% | |
| GTTACACGCTTATGGACATC+TGG | - | chr4_4:67873996-67874015 | None:intergenic | 45.0% | |
| ATGTCCATAAGCGTGTAACG+TGG | + | chr4_4:67873997-67874016 | Msa0697860:intron | 45.0% | |
| TCATCCACGTTACACGCTTA+TGG | - | chr4_4:67874004-67874023 | None:intergenic | 45.0% | |
| AAGATCTCCGGTTCAAATCC+AGG | - | chr4_4:67874069-67874088 | None:intergenic | 45.0% | |
| TACTTCACGGACAAGATCTC+CGG | - | chr4_4:67874081-67874100 | None:intergenic | 45.0% | |
| CACCTACGGTCTATCCAATT+GGG | + | chr4_4:67874109-67874128 | Msa0697860:intron | 45.0% | |
| CAGCAGGCAAATTTCCTATC+TGG | - | chr4_4:67874270-67874289 | None:intergenic | 45.0% | |
| CAGATAGGAAATTTGCCTGC+TGG | + | chr4_4:67874268-67874287 | Msa0697860:intron | 45.0% | |
| TACATGGAATCACTACCAGC+AGG | - | chr4_4:67874286-67874305 | None:intergenic | 45.0% | |
| TTGGTGGAAGGAAACCTACA+AGG | - | chr4_4:67874884-67874903 | None:intergenic | 45.0% | |
| GGTTTCCTTCCACCAATTCA+AGG | + | chr4_4:67874888-67874907 | Msa0697860:intron | 45.0% | |
| TGTCTCCTTGAATTGGTGGA+AGG | - | chr4_4:67874896-67874915 | None:intergenic | 45.0% | |
| TGTCATTGCTGGACACGTAT+TGG | + | chr4_4:67875122-67875141 | Msa0697860:intron | 45.0% | |
| GGATCCCTAGTATCATAGTC+TGG | - | chr4_4:67875152-67875171 | None:intergenic | 45.0% | |
| GATACTAGGGATCCAAAGTG+TGG | + | chr4_4:67875158-67875177 | Msa0697860:intron | 45.0% | |
| CAAACTATCTGGCCACACTT+TGG | - | chr4_4:67875173-67875192 | None:intergenic | 45.0% | |
| GCTGCAATGTTCTGTCATTC+TGG | + | chr4_4:67875232-67875251 | Msa0697860:intron | 45.0% | |
| ! | GCTCTCCCAAACAGTTTTAC+AGG | - | chr4_4:67875338-67875357 | None:intergenic | 45.0% |
| GCATAGAATGATAGGGGACT+AGG | + | chr4_4:67875692-67875711 | Msa0697860:intron | 45.0% | |
| AGGTATACAGTTGGAGGGAT+AGG | + | chr4_4:67875729-67875748 | Msa0697860:intron | 45.0% | |
| TATACAGTTGGAGGGATAGG+AGG | + | chr4_4:67875732-67875751 | Msa0697860:intron | 45.0% | |
| ATACAGTTGGAGGGATAGGA+GGG | + | chr4_4:67875733-67875752 | Msa0697860:intron | 45.0% | |
| TTCCGTGGGCAAACTGTAAA+AGG | - | chr4_4:67876125-67876144 | None:intergenic | 45.0% | |
| ATGAAGCTCTTCTCTTCCGT+GGG | - | chr4_4:67876139-67876158 | None:intergenic | 45.0% | |
| ! | GGCAGATTTTCTATGAGAGC+AGG | + | chr4_4:67876323-67876342 | Msa0697860:CDS | 45.0% |
| TCCAGATTCAGCTACTTCAG+CGG | - | chr4_4:67876390-67876409 | None:intergenic | 45.0% | |
| ! | AGCTGATTCAGCTACTTCAG+CGG | - | chr4_4:67876504-67876523 | None:intergenic | 45.0% |
| ! | AGATTCAGGCGAAGTTGGTT+GGG | - | chr4_4:67876555-67876574 | None:intergenic | 45.0% |
| ! | TGATGGTGTTGGGATTGACA+GGG | - | chr4_4:67876586-67876605 | None:intergenic | 45.0% |
| AACCTCAATGCCATCATCCA+GGG | - | chr4_4:67876621-67876640 | None:intergenic | 45.0% | |
| ATTGAGGTTGTCCTCCCAAA+TGG | + | chr4_4:67876632-67876651 | Msa0697860:CDS | 45.0% | |
| GGAACTCTGTCTGAACCATT+TGG | - | chr4_4:67876650-67876669 | None:intergenic | 45.0% | |
| TTCAGACAGAGTTCCCTCTA+GGG | + | chr4_4:67876655-67876674 | Msa0697860:CDS | 45.0% | |
| !! | AAAAATAAGATATTAATATA+TGG | + | chr4_4:67874614-67874633 | Msa0697860:intron | 5.0% |
| !! | AAAATAAGATATTAATATAT+GGG | + | chr4_4:67874615-67874634 | Msa0697860:intron | 5.0% |
| CGCAGGTTTAAAGGCGGTTT+AGG | - | chr4_4:67871926-67871945 | None:intergenic | 50.0% | |
| GATGTATCAAACGCCGGTGA+AGG | + | chr4_4:67872773-67872792 | Msa0697860:CDS | 50.0% | |
| ATTCAGGTGAGGCCAATGTC+AGG | + | chr4_4:67872825-67872844 | Msa0697860:CDS | 50.0% | |
| GGAAGATGAAGAGCCTCTAC+CGG | - | chr4_4:67872898-67872917 | None:intergenic | 50.0% | |
| ACTCTTCGAGGACGAAGAAG+AGG | - | chr4_4:67872919-67872938 | None:intergenic | 50.0% | |
| AGAAGGAGGTTTGCAGAGCA+TGG | + | chr4_4:67872949-67872968 | Msa0697860:CDS | 50.0% | |
| GAAGGAGGTTTGCAGAGCAT+GGG | + | chr4_4:67872950-67872969 | Msa0697860:CDS | 50.0% | |
| ! | CCTGGCATTTGGAGTCATAG+CGG | - | chr4_4:67872992-67873011 | None:intergenic | 50.0% |
| ! | AGTTATGGCGGGAACAAACC+TGG | - | chr4_4:67873010-67873029 | None:intergenic | 50.0% |
| GTGACGTCACGACTCCAATA+AGG | + | chr4_4:67873594-67873613 | Msa0697860:intron | 50.0% | |
| ! | TAAGGGTGTATGTGTCTGGC+AGG | + | chr4_4:67873612-67873631 | Msa0697860:intron | 50.0% |
| GGACCATCCTGGATTTGAAC+CGG | + | chr4_4:67874059-67874078 | Msa0697860:intron | 50.0% | |
| TCTCCGGTTCAAATCCAGGA+TGG | - | chr4_4:67874065-67874084 | None:intergenic | 50.0% | |
| GCACCTACGGTCTATCCAAT+TGG | + | chr4_4:67874108-67874127 | Msa0697860:intron | 50.0% | |
| CTCCCAATTGGATAGACCGT+AGG | - | chr4_4:67874114-67874133 | None:intergenic | 50.0% | |
| GGTCTATCCAATTGGGAGTG+AGG | + | chr4_4:67874116-67874135 | Msa0697860:intron | 50.0% | |
| ATACCTGACTGCCGCAAGAA+CGG | - | chr4_4:67874216-67874235 | None:intergenic | 50.0% | |
| TGCTATGAACGACTGCAACC+TGG | + | chr4_4:67874437-67874456 | Msa0697860:intron | 50.0% | |
| TTGCAAGCAAGCGTCCTTGT+AGG | + | chr4_4:67874867-67874886 | Msa0697860:intron | 50.0% | |
| GGGGACTAGGATCTCCTATT+AGG | + | chr4_4:67875705-67875724 | Msa0697860:intron | 50.0% | |
| GTAACAGAATGTCGGAGACC+TGG | - | chr4_4:67875917-67875936 | None:intergenic | 50.0% | |
| GATGAAGCTCTTCTCTTCCG+TGG | - | chr4_4:67876140-67876159 | None:intergenic | 50.0% | |
| CTCTTCATGGAGAGACGACT+TGG | - | chr4_4:67876162-67876181 | None:intergenic | 50.0% | |
| AGGACTGTGCTTGTATGACC+CGG | + | chr4_4:67876343-67876362 | Msa0697860:CDS | 50.0% | |
| TCAGGAACAATGCGGCTATC+CGG | - | chr4_4:67876365-67876384 | None:intergenic | 50.0% | |
| ! | CAGCGGATTCAGGAACAATG+CGG | - | chr4_4:67876373-67876392 | None:intergenic | 50.0% |
| ! | TCAGCTACTTCAGCGGATTC+AGG | - | chr4_4:67876383-67876402 | None:intergenic | 50.0% |
| TCCGCTGAAGTAGCTGAATC+TGG | + | chr4_4:67876386-67876405 | Msa0697860:CDS | 50.0% | |
| ATGAGTGCGATGAGGTTCAG+GGG | - | chr4_4:67876450-67876469 | None:intergenic | 50.0% | |
| CATGAGTGCGATGAGGTTCA+GGG | - | chr4_4:67876451-67876470 | None:intergenic | 50.0% | |
| TCAGGAACAATGCGGCTATC+CGG | - | chr4_4:67876365-67876384 | None:intergenic | 50.0% | |
| CAGCGGTTTCAGGAACAATG+CGG | - | chr4_4:67876487-67876506 | None:intergenic | 50.0% | |
| TCAGCTACTTCAGCGGTTTC+AGG | - | chr4_4:67876497-67876516 | None:intergenic | 50.0% | |
| GCTGAAGTAGCTGAATCAGC+TGG | + | chr4_4:67876503-67876522 | Msa0697860:CDS | 50.0% | |
| ! | GAGATTCAGGCGAAGTTGGT+TGG | - | chr4_4:67876556-67876575 | None:intergenic | 50.0% |
| CGATGAGATTCAGGCGAAGT+TGG | - | chr4_4:67876560-67876579 | None:intergenic | 50.0% | |
| ! | ACAGGGGTACGATGAGATTC+AGG | - | chr4_4:67876569-67876588 | None:intergenic | 50.0% |
| ! | GATGGTGTTGGGATTGACAG+GGG | - | chr4_4:67876585-67876604 | None:intergenic | 50.0% |
| ! | CTGATGGTGTTGGGATTGAC+AGG | - | chr4_4:67876587-67876606 | None:intergenic | 50.0% |
| ACCTCAATGCCATCATCCAG+GGG | - | chr4_4:67876620-67876639 | None:intergenic | 50.0% | |
| CAACCTCAATGCCATCATCC+AGG | - | chr4_4:67876622-67876641 | None:intergenic | 50.0% | |
| CTCTGTCTGAACCATTTGGG+AGG | - | chr4_4:67876646-67876665 | None:intergenic | 50.0% | |
| GTTCAGACAGAGTTCCCTCT+AGG | + | chr4_4:67876654-67876673 | Msa0697860:CDS | 50.0% | |
| GCATCAACTTCCTCCCTAGA+GGG | - | chr4_4:67876671-67876690 | None:intergenic | 50.0% | |
| TGCATCAACTTCCTCCCTAG+AGG | - | chr4_4:67876672-67876691 | None:intergenic | 50.0% | |
| GGTAACGTCGAAGTTCTCGG+CGG | - | chr4_4:67872517-67872536 | None:intergenic | 55.0% | |
| GCCGAGAACTTCGACGTTAC+CGG | + | chr4_4:67872516-67872535 | Msa0697860:CDS | 55.0% | |
| GCCGGTAACGTCGAAGTTCT+CGG | - | chr4_4:67872520-67872539 | None:intergenic | 55.0% | |
| GCAAAAACGCCACCGTACTC+CGG | + | chr4_4:67872645-67872664 | Msa0697860:CDS | 55.0% | |
| CCTGAACTGTTGCCGGAGTA+CGG | - | chr4_4:67872660-67872679 | None:intergenic | 55.0% | |
| CGTACTCCGGCAACAGTTCA+GGG | + | chr4_4:67872658-67872677 | Msa0697860:CDS | 55.0% | |
| GTACTCCGGCAACAGTTCAG+GGG | + | chr4_4:67872659-67872678 | Msa0697860:CDS | 55.0% | |
| TACTCCGGCAACAGTTCAGG+GGG | + | chr4_4:67872660-67872679 | Msa0697860:CDS | 55.0% | |
| ATTCCCCCCTGAACTGTTGC+CGG | - | chr4_4:67872667-67872686 | None:intergenic | 55.0% | |
| ACCGGCGTTTGATACATCCG+CGG | - | chr4_4:67872771-67872790 | None:intergenic | 55.0% | |
| TATCAAACGCCGGTGAAGGG+TGG | + | chr4_4:67872777-67872796 | Msa0697860:CDS | 55.0% | |
| ACTTCCTCACCACCCTTCAC+CGG | - | chr4_4:67872789-67872808 | None:intergenic | 55.0% | |
| TGCAGAGCATGGGAGGAATC+TGG | + | chr4_4:67872960-67872979 | Msa0697860:CDS | 55.0% | |
| CCGCTATGACTCCAAATGCC+AGG | + | chr4_4:67872989-67873008 | Msa0697860:CDS | 55.0% | |
| GCGGGAACAAACCTGGCATT+TGG | - | chr4_4:67873003-67873022 | None:intergenic | 55.0% | |
| TGAAATCACGGTGAGACGCC+GGG | - | chr4_4:67873400-67873419 | None:intergenic | 55.0% | |
| CTGAAATCACGGTGAGACGC+CGG | - | chr4_4:67873401-67873420 | None:intergenic | 55.0% | |
| TTGCTCGCCTCACTCCCAAT+TGG | - | chr4_4:67874126-67874145 | None:intergenic | 55.0% | |
| AGGTTCCCTCACCGTTCTTG+CGG | + | chr4_4:67874202-67874221 | Msa0697860:intron | 55.0% | |
| CAGGAACAATGCGGCTATCC+GGG | - | chr4_4:67876364-67876383 | None:intergenic | 55.0% | |
| AGGTTCAGGGGAAGCTGGTT+GGG | - | chr4_4:67876438-67876457 | None:intergenic | 55.0% | |
| GCATGAGTGCGATGAGGTTC+AGG | - | chr4_4:67876452-67876471 | None:intergenic | 55.0% | |
| CAGGAACAATGCGGCTATCC+GGG | - | chr4_4:67876364-67876383 | None:intergenic | 55.0% | |
| ATCCCAACACCATCAGCGAC+TGG | + | chr4_4:67876591-67876610 | Msa0697860:CDS | 55.0% | |
| ! | GACCAGTCGCTGATGGTGTT+GGG | - | chr4_4:67876596-67876615 | None:intergenic | 55.0% |
| ! | TGACCAGTCGCTGATGGTGT+TGG | - | chr4_4:67876597-67876616 | None:intergenic | 55.0% |
| ! | ACCCCTGGATGATGGCATTG+AGG | + | chr4_4:67876616-67876635 | Msa0697860:CDS | 55.0% |
| ! | AGACAGAGTTCCCTCTAGGG+AGG | + | chr4_4:67876658-67876677 | Msa0697860:CDS | 55.0% |
| !! | TCGCAAAGTGCCGCAAACAC+TGG | - | chr4_4:67876740-67876759 | None:intergenic | 55.0% |
| AGTGTTTGCGGCACTTTGCG+AGG | + | chr4_4:67876739-67876758 | Msa0697860:CDS | 55.0% | |
| GTGTTTGCGGCACTTTGCGA+GGG | + | chr4_4:67876740-67876759 | Msa0697860:CDS | 55.0% | |
| TGTTTGCGGCACTTTGCGAG+GGG | + | chr4_4:67876741-67876760 | Msa0697860:CDS | 55.0% | |
| GCGGAACACGATAGTGACGC+AGG | - | chr4_4:67871943-67871962 | None:intergenic | 60.0% | |
| AACGTCGAAGTTCTCGGCGG+CGG | - | chr4_4:67872514-67872533 | None:intergenic | 60.0% | |
| GAACTGTTGCCGGAGTACGG+TGG | - | chr4_4:67872657-67872676 | None:intergenic | 60.0% | |
| CCGTACTCCGGCAACAGTTC+AGG | + | chr4_4:67872657-67872676 | Msa0697860:CDS | 60.0% | |
| ACTCCGGCAACAGTTCAGGG+GGG | + | chr4_4:67872661-67872680 | Msa0697860:CDS | 60.0% | |
| GCCGCGGATGTATCAAACGC+CGG | + | chr4_4:67872767-67872786 | Msa0697860:CDS | 60.0% | |
| CAGGTGAGGCCAATGTCAGG+AGG | + | chr4_4:67872828-67872847 | Msa0697860:CDS | 60.0% | |
| GGAGGTTTGCAGAGCATGGG+AGG | + | chr4_4:67872953-67872972 | Msa0697860:CDS | 60.0% | |
| GACTGCCGCAAGAACGGTGA+GGG | - | chr4_4:67874210-67874229 | None:intergenic | 60.0% | |
| TGACTGCCGCAAGAACGGTG+AGG | - | chr4_4:67874211-67874230 | None:intergenic | 60.0% | |
| TCACCGTTCTTGCGGCAGTC+AGG | + | chr4_4:67874210-67874229 | Msa0697860:intron | 60.0% | |
| GAGGTTCAGGGGAAGCTGGT+TGG | - | chr4_4:67876439-67876458 | None:intergenic | 60.0% | |
| CGATGAGGTTCAGGGGAAGC+TGG | - | chr4_4:67876443-67876462 | None:intergenic | 60.0% | |
| TCATCGCACTCATGCCAGCC+CGG | + | chr4_4:67876457-67876476 | Msa0697860:CDS | 60.0% | |
| AACAATGCGGCTATCCGGGC+TGG | - | chr4_4:67876474-67876493 | None:intergenic | 60.0% | |
| ! | GACTGGTCACCCCTGGATGA+TGG | + | chr4_4:67876608-67876627 | Msa0697860:CDS | 60.0% |
| GCGGCGGAGGGTTGAAAACC+TGG | - | chr4_4:67872498-67872517 | None:intergenic | 65.0% | |
| TCGAAGTTCTCGGCGGCGGA+GGG | - | chr4_4:67872510-67872529 | None:intergenic | 65.0% | |
| AGAAGCAGCTCTCGTCGCCG+CGG | + | chr4_4:67872751-67872770 | Msa0697860:CDS | 65.0% | |
| AACGCCGGTGAAGGGTGGTG+AGG | + | chr4_4:67872782-67872801 | Msa0697860:CDS | 65.0% | |
| CACGGTGAGACGCCGGGATT+TGG | - | chr4_4:67873394-67873413 | None:intergenic | 65.0% | |
| ! | GGGCTGGCATGAGTGCGATG+AGG | - | chr4_4:67876458-67876477 | None:intergenic | 65.0% |
| CAGGGGTGACCAGTCGCTGA+TGG | - | chr4_4:67876603-67876622 | None:intergenic | 65.0% | |
| ! | CATCAGCGACTGGTCACCCC+TGG | + | chr4_4:67876601-67876620 | Msa0697860:CDS | 65.0% |
| GTCGAAGTTCTCGGCGGCGG+AGG | - | chr4_4:67872511-67872530 | None:intergenic | 70.0% | |
| AGCAAGCTGCGACGGCGAGC+CGG | - | chr4_4:67872538-67872557 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 67871904 | 67876769 | 67871904 | ID=Msa0697860;Name=Msa0697860 |
| chr4_4 | mRNA | 67871904 | 67876769 | 67871904 | ID=Msa0697860-mRNA-1;Parent=Msa0697860;Name=Msa0697860-mRNA-1;_AED=0.34;_eAED=0.34;_QI=212|1|0.75|1|0.66|0.5|4|0|384 |
| chr4_4 | exon | 67871904 | 67872103 | 67871904 | ID=Msa0697860-mRNA-1:exon:20085;Parent=Msa0697860-mRNA-1 |
| chr4_4 | exon | 67872360 | 67873010 | 67872360 | ID=Msa0697860-mRNA-1:exon:20086;Parent=Msa0697860-mRNA-1 |
| chr4_4 | exon | 67876132 | 67876191 | 67876132 | ID=Msa0697860-mRNA-1:exon:20087;Parent=Msa0697860-mRNA-1 |
| chr4_4 | exon | 67876314 | 67876769 | 67876314 | ID=Msa0697860-mRNA-1:exon:20088;Parent=Msa0697860-mRNA-1 |
| chr4_4 | five_prime_UTR | 67871904 | 67872103 | 67871904 | ID=Msa0697860-mRNA-1:five_prime_utr;Parent=Msa0697860-mRNA-1 |
| chr4_4 | five_prime_UTR | 67872360 | 67872371 | 67872360 | ID=Msa0697860-mRNA-1:five_prime_utr;Parent=Msa0697860-mRNA-1 |
| chr4_4 | CDS | 67872372 | 67873010 | 67872372 | ID=Msa0697860-mRNA-1:cds;Parent=Msa0697860-mRNA-1 |
| chr4_4 | CDS | 67876132 | 67876191 | 67876132 | ID=Msa0697860-mRNA-1:cds;Parent=Msa0697860-mRNA-1 |
| chr4_4 | CDS | 67876314 | 67876769 | 67876314 | ID=Msa0697860-mRNA-1:cds;Parent=Msa0697860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
