Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699400 | PNX80761.1 | 58.373 | 209 | 70 | 2 | 52 | 243 | 17 | 225 | 1.43e-75 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699400 | sp|Q9LKR4|FRS10_ARATH | 31.844 | 179 | 95 | 6 | 83 | 237 | 61 | 236 | 4.32e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699400 | A0A2K3LQE0 | 58.373 | 209 | 70 | 2 | 52 | 243 | 17 | 225 | 6.83e-76 | 248 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0699400 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699400 | MtrunA17_Chr2g0287651 | 37.634 | 186 | 96 | 3 | 76 | 241 | 74 | 259 | 2.50e-37 | 139 |
| Msa0699400 | MtrunA17_Chr1g0203051 | 26.484 | 219 | 131 | 5 | 24 | 219 | 30 | 241 | 2.51e-16 | 77.8 |
| Msa0699400 | MtrunA17_Chr2g0290391 | 28.070 | 171 | 97 | 3 | 81 | 227 | 55 | 223 | 1.22e-11 | 63.9 |
| Msa0699400 | MtrunA17_Chr1g0198761 | 28.161 | 174 | 96 | 5 | 83 | 227 | 53 | 226 | 1.51e-11 | 63.9 |
| Msa0699400 | MtrunA17_Chr5g0448761 | 30.247 | 162 | 91 | 3 | 81 | 220 | 64 | 225 | 4.61e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699400 | AT5G28530.3 | 31.844 | 179 | 95 | 6 | 83 | 237 | 61 | 236 | 3.88e-14 | 72.0 |
| Msa0699400 | AT5G28530.2 | 31.844 | 179 | 95 | 6 | 83 | 237 | 61 | 236 | 3.88e-14 | 72.0 |
| Msa0699400 | AT5G28530.5 | 31.844 | 179 | 95 | 6 | 83 | 237 | 61 | 236 | 4.09e-14 | 71.6 |
| Msa0699400 | AT5G28530.1 | 31.844 | 179 | 95 | 6 | 83 | 237 | 61 | 236 | 4.39e-14 | 71.6 |
| Msa0699400 | AT5G28530.4 | 31.844 | 179 | 95 | 6 | 83 | 237 | 61 | 236 | 4.67e-14 | 71.6 |
| Msa0699400 | AT4G38180.1 | 28.796 | 191 | 107 | 5 | 59 | 220 | 47 | 237 | 5.04e-11 | 62.8 |
Find 49 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTACTTTGAGTTTCTTCC+AGG | 0.200108 | 4_4:+70033886 | Msa0699400:CDS |
| TCACTCAATTTCCGGTAATT+AGG | 0.200610 | 4_4:-70033689 | None:intergenic |
| TATCAACTTCACTCAATTTC+CGG | 0.238375 | 4_4:-70033697 | None:intergenic |
| TTCATTTGATTCCTAATTAC+CGG | 0.300050 | 4_4:+70033678 | Msa0699400:CDS |
| TGATAAACCCAAGCCCTTCA+TGG | 0.358290 | 4_4:-70033799 | None:intergenic |
| GTGAAGATATAGAAGTCAAC+AGG | 0.363051 | 4_4:+70033209 | Msa0699400:CDS |
| TGATGATGATGTAAGGGATA+TGG | 0.377729 | 4_4:+70033357 | Msa0699400:CDS |
| AAGGGTGGCCATGAAGGGCT+TGG | 0.402601 | 4_4:+70033791 | Msa0699400:CDS |
| AAAAGAATGGCAGCCGATCT+AGG | 0.403064 | 4_4:+70033535 | Msa0699400:CDS |
| GTTGATAAACAAGTTGTTAG+TGG | 0.403373 | 4_4:+70033713 | Msa0699400:CDS |
| TGTCAGAGCATGTCATATCT+TGG | 0.421443 | 4_4:+70033751 | Msa0699400:CDS |
| AGGGTGGCCATGAAGGGCTT+GGG | 0.438382 | 4_4:+70033792 | Msa0699400:CDS |
| GTCAGAGCATGTCATATCTT+GGG | 0.459621 | 4_4:+70033752 | Msa0699400:CDS |
| GCAAGGGTTAAAATAAAAGA+TGG | 0.464290 | 4_4:+70033854 | Msa0699400:CDS |
| TTTCACTTCATCCTTTCTTA+CGG | 0.470728 | 4_4:-70033443 | None:intergenic |
| AATGCGCTAGAGCTAATTCA+TGG | 0.471439 | 4_4:-70033652 | None:intergenic |
| CGCACAACAGTTAGTTCGAA+TGG | 0.478548 | 4_4:-70033562 | None:intergenic |
| TTCGAATGGTTGTCCTAGAT+CGG | 0.479891 | 4_4:-70033548 | None:intergenic |
| AAAGGACTTGTATAATTTCA+CGG | 0.486061 | 4_4:+70033823 | Msa0699400:CDS |
| GGTGAAAAGGGTGGCCATGA+AGG | 0.487080 | 4_4:+70033785 | Msa0699400:CDS |
| CTCTGACACCTTGTGAATGC+AGG | 0.487428 | 4_4:-70033736 | None:intergenic |
| CCACGGGTTTGCCGTAAGAA+AGG | 0.509596 | 4_4:+70033432 | Msa0699400:CDS |
| CAAGGGTTAAAATAAAAGAT+GGG | 0.510385 | 4_4:+70033855 | Msa0699400:CDS |
| GTAATGTTTGCGAGATGCCA+CGG | 0.534531 | 4_4:+70033415 | Msa0699400:CDS |
| TCAACTAGTATGCAATAAAG+AGG | 0.542921 | 4_4:+70033495 | Msa0699400:CDS |
| TCTACTTTGAGTTTCTTCCA+GGG | 0.547494 | 4_4:+70033887 | Msa0699400:CDS |
| TAATGTTTGCGAGATGCCAC+GGG | 0.547530 | 4_4:+70033416 | Msa0699400:CDS |
| AGGGCTTGGGTTTATCAGAA+AGG | 0.549586 | 4_4:+70033805 | Msa0699400:CDS |
| GTGAAAAGGGTGGCCATGAA+GGG | 0.551220 | 4_4:+70033786 | Msa0699400:CDS |
| GTGGAATTCAACCATGGTAA+TGG | 0.562978 | 4_4:+70033268 | Msa0699400:CDS |
| TGTACATAGTGATACAGATA+AGG | 0.591297 | 4_4:+70033144 | Msa0699400:CDS |
| GTTAGTGGCCTGCATTCACA+AGG | 0.594354 | 4_4:+70033728 | Msa0699400:CDS |
| ATTTCACGGATCATCAAGCA+AGG | 0.595861 | 4_4:+70033837 | Msa0699400:CDS |
| AATGGTGTTTGCAGTGAGCA+AGG | 0.608644 | 4_4:+70033286 | Msa0699400:CDS |
| AAGGGTTAAAATAAAAGATG+GGG | 0.619179 | 4_4:+70033856 | Msa0699400:CDS |
| ATGGTGTTTGCAGTGAGCAA+GGG | 0.627698 | 4_4:+70033287 | Msa0699400:CDS |
| ACATAGTGATACAGATAAGG+TGG | 0.631316 | 4_4:+70033147 | Msa0699400:CDS |
| CAACTAGTATGCAATAAAGA+GGG | 0.632289 | 4_4:+70033496 | Msa0699400:CDS |
| TAATAGAGATGCAGACGGTG+TGG | 0.636745 | 4_4:+70033249 | Msa0699400:CDS |
| CACTGCAAACACCATTACCA+TGG | 0.645481 | 4_4:-70033279 | None:intergenic |
| GTATCACTATGTACATCAAG+AGG | 0.649320 | 4_4:-70033136 | None:intergenic |
| CCTTTCTTACGGCAAACCCG+TGG | 0.649948 | 4_4:-70033432 | None:intergenic |
| CAAGGGAAAGAGAACTCCGA+TGG | 0.649967 | 4_4:+70033304 | Msa0699400:CDS |
| TTTCACGGATCATCAAGCAA+GGG | 0.657642 | 4_4:+70033838 | Msa0699400:CDS |
| TGAAGATATAGAAGTCAACA+GGG | 0.676971 | 4_4:+70033210 | Msa0699400:CDS |
| GACGGTGTGGAATTCAACCA+TGG | 0.691057 | 4_4:+70033262 | Msa0699400:CDS |
| CGTACTAATAGAGATGCAGA+CGG | 0.718664 | 4_4:+70033244 | Msa0699400:CDS |
| GGATATGGAATTCAACACAG+AGG | 0.754326 | 4_4:+70033372 | Msa0699400:CDS |
| GAAGATATAGAAGTCAACAG+GGG | 0.763662 | 4_4:+70033211 | Msa0699400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTATGAAAAAAAAAGAA+TGG | + | chr4_4:70033522-70033541 | Msa0699400:CDS | 10.0% |
| !! | TAATTATGAAAAAAAAAGAA+TGG | + | chr4_4:70033522-70033541 | Msa0699400:CDS | 10.0% |
| ! | ACAACTTTCTTTGTAAGAAT+TGG | + | chr4_4:70033601-70033620 | Msa0699400:intron | 25.0% |
| ! | TTCATTTGATTCCTAATTAC+CGG | + | chr4_4:70033678-70033697 | Msa0699400:CDS | 25.0% |
| !!! | CATATCTTGGGTTTTTTTAT+CGG | + | chr4_4:70033764-70033783 | Msa0699400:CDS | 25.0% |
| ! | AAAGGACTTGTATAATTTCA+CGG | + | chr4_4:70033823-70033842 | Msa0699400:CDS | 25.0% |
| ! | CAAGGGTTAAAATAAAAGAT+GGG | + | chr4_4:70033855-70033874 | Msa0699400:CDS | 25.0% |
| ! | AAGGGTTAAAATAAAAGATG+GGG | + | chr4_4:70033856-70033875 | Msa0699400:CDS | 25.0% |
| ! | ACAACTTTCTTTGTAAGAAT+TGG | + | chr4_4:70033601-70033620 | Msa0699400:intron | 25.0% |
| ! | TTCATTTGATTCCTAATTAC+CGG | + | chr4_4:70033678-70033697 | Msa0699400:CDS | 25.0% |
| !!! | CATATCTTGGGTTTTTTTAT+CGG | + | chr4_4:70033764-70033783 | Msa0699400:CDS | 25.0% |
| ! | AAAGGACTTGTATAATTTCA+CGG | + | chr4_4:70033823-70033842 | Msa0699400:CDS | 25.0% |
| ! | CAAGGGTTAAAATAAAAGAT+GGG | + | chr4_4:70033855-70033874 | Msa0699400:CDS | 25.0% |
| ! | AAGGGTTAAAATAAAAGATG+GGG | + | chr4_4:70033856-70033875 | Msa0699400:CDS | 25.0% |
| TGTACATAGTGATACAGATA+AGG | + | chr4_4:70033144-70033163 | Msa0699400:CDS | 30.0% | |
| TGAAGATATAGAAGTCAACA+GGG | + | chr4_4:70033210-70033229 | Msa0699400:CDS | 30.0% | |
| ATTGATGCATTTGTAACCAT+CGG | - | chr4_4:70033323-70033342 | None:intergenic | 30.0% | |
| ! | AGATGATGATGATGATGTAA+GGG | + | chr4_4:70033351-70033370 | Msa0699400:intron | 30.0% |
| TTTCACTTCATCCTTTCTTA+CGG | - | chr4_4:70033446-70033465 | None:intergenic | 30.0% | |
| TCAACTAGTATGCAATAAAG+AGG | + | chr4_4:70033495-70033514 | Msa0699400:CDS | 30.0% | |
| CAACTAGTATGCAATAAAGA+GGG | + | chr4_4:70033496-70033515 | Msa0699400:CDS | 30.0% | |
| TATCAACTTCACTCAATTTC+CGG | - | chr4_4:70033700-70033719 | None:intergenic | 30.0% | |
| ! | GTTGATAAACAAGTTGTTAG+TGG | + | chr4_4:70033713-70033732 | Msa0699400:CDS | 30.0% |
| !!! | GGTTTTTTTATCGGTGAAAA+GGG | + | chr4_4:70033773-70033792 | Msa0699400:CDS | 30.0% |
| GCAAGGGTTAAAATAAAAGA+TGG | + | chr4_4:70033854-70033873 | Msa0699400:CDS | 30.0% | |
| TGTACATAGTGATACAGATA+AGG | + | chr4_4:70033144-70033163 | Msa0699400:CDS | 30.0% | |
| TGAAGATATAGAAGTCAACA+GGG | + | chr4_4:70033210-70033229 | Msa0699400:CDS | 30.0% | |
| ATTGATGCATTTGTAACCAT+CGG | - | chr4_4:70033323-70033342 | None:intergenic | 30.0% | |
| ! | AGATGATGATGATGATGTAA+GGG | + | chr4_4:70033351-70033370 | Msa0699400:intron | 30.0% |
| TTTCACTTCATCCTTTCTTA+CGG | - | chr4_4:70033446-70033465 | None:intergenic | 30.0% | |
| TCAACTAGTATGCAATAAAG+AGG | + | chr4_4:70033495-70033514 | Msa0699400:CDS | 30.0% | |
| CAACTAGTATGCAATAAAGA+GGG | + | chr4_4:70033496-70033515 | Msa0699400:CDS | 30.0% | |
| TATCAACTTCACTCAATTTC+CGG | - | chr4_4:70033700-70033719 | None:intergenic | 30.0% | |
| ! | GTTGATAAACAAGTTGTTAG+TGG | + | chr4_4:70033713-70033732 | Msa0699400:CDS | 30.0% |
| !!! | GGTTTTTTTATCGGTGAAAA+GGG | + | chr4_4:70033773-70033792 | Msa0699400:CDS | 30.0% |
| GCAAGGGTTAAAATAAAAGA+TGG | + | chr4_4:70033854-70033873 | Msa0699400:CDS | 30.0% | |
| GTATCACTATGTACATCAAG+AGG | - | chr4_4:70033139-70033158 | None:intergenic | 35.0% | |
| ACATAGTGATACAGATAAGG+TGG | + | chr4_4:70033147-70033166 | Msa0699400:CDS | 35.0% | |
| GTGAAGATATAGAAGTCAAC+AGG | + | chr4_4:70033209-70033228 | Msa0699400:CDS | 35.0% | |
| GAAGATATAGAAGTCAACAG+GGG | + | chr4_4:70033211-70033230 | Msa0699400:CDS | 35.0% | |
| ! | CAGATGATGATGATGATGTA+AGG | + | chr4_4:70033350-70033369 | Msa0699400:intron | 35.0% |
| ! | TGATGATGATGTAAGGGATA+TGG | + | chr4_4:70033357-70033376 | Msa0699400:CDS | 35.0% |
| TCACTCAATTTCCGGTAATT+AGG | - | chr4_4:70033692-70033711 | None:intergenic | 35.0% | |
| !!! | GGGTTTTTTTATCGGTGAAA+AGG | + | chr4_4:70033772-70033791 | Msa0699400:CDS | 35.0% |
| !!! | TTTTTTATCGGTGAAAAGGG+TGG | + | chr4_4:70033776-70033795 | Msa0699400:CDS | 35.0% |
| ! | TTCTACTTTGAGTTTCTTCC+AGG | + | chr4_4:70033886-70033905 | Msa0699400:CDS | 35.0% |
| ! | TCTACTTTGAGTTTCTTCCA+GGG | + | chr4_4:70033887-70033906 | Msa0699400:CDS | 35.0% |
| GTATCACTATGTACATCAAG+AGG | - | chr4_4:70033139-70033158 | None:intergenic | 35.0% | |
| ACATAGTGATACAGATAAGG+TGG | + | chr4_4:70033147-70033166 | Msa0699400:CDS | 35.0% | |
| GTGAAGATATAGAAGTCAAC+AGG | + | chr4_4:70033209-70033228 | Msa0699400:CDS | 35.0% | |
| GAAGATATAGAAGTCAACAG+GGG | + | chr4_4:70033211-70033230 | Msa0699400:CDS | 35.0% | |
| ! | CAGATGATGATGATGATGTA+AGG | + | chr4_4:70033350-70033369 | Msa0699400:intron | 35.0% |
| ! | TGATGATGATGTAAGGGATA+TGG | + | chr4_4:70033357-70033376 | Msa0699400:CDS | 35.0% |
| TCACTCAATTTCCGGTAATT+AGG | - | chr4_4:70033692-70033711 | None:intergenic | 35.0% | |
| !!! | GGGTTTTTTTATCGGTGAAA+AGG | + | chr4_4:70033772-70033791 | Msa0699400:CDS | 35.0% |
| !!! | TTTTTTATCGGTGAAAAGGG+TGG | + | chr4_4:70033776-70033795 | Msa0699400:CDS | 35.0% |
| ! | TTCTACTTTGAGTTTCTTCC+AGG | + | chr4_4:70033886-70033905 | Msa0699400:CDS | 35.0% |
| ! | TCTACTTTGAGTTTCTTCCA+GGG | + | chr4_4:70033887-70033906 | Msa0699400:CDS | 35.0% |
| CGTACTAATAGAGATGCAGA+CGG | + | chr4_4:70033244-70033263 | Msa0699400:CDS | 40.0% | |
| GTGGAATTCAACCATGGTAA+TGG | + | chr4_4:70033268-70033287 | Msa0699400:CDS | 40.0% | |
| GGATATGGAATTCAACACAG+AGG | + | chr4_4:70033372-70033391 | Msa0699400:CDS | 40.0% | |
| TTCGAATGGTTGTCCTAGAT+CGG | - | chr4_4:70033551-70033570 | None:intergenic | 40.0% | |
| AATGCGCTAGAGCTAATTCA+TGG | - | chr4_4:70033655-70033674 | None:intergenic | 40.0% | |
| TGTCAGAGCATGTCATATCT+TGG | + | chr4_4:70033751-70033770 | Msa0699400:CDS | 40.0% | |
| GTCAGAGCATGTCATATCTT+GGG | + | chr4_4:70033752-70033771 | Msa0699400:CDS | 40.0% | |
| ATTTCACGGATCATCAAGCA+AGG | + | chr4_4:70033837-70033856 | Msa0699400:CDS | 40.0% | |
| TTTCACGGATCATCAAGCAA+GGG | + | chr4_4:70033838-70033857 | Msa0699400:CDS | 40.0% | |
| CGTACTAATAGAGATGCAGA+CGG | + | chr4_4:70033244-70033263 | Msa0699400:CDS | 40.0% | |
| GTGGAATTCAACCATGGTAA+TGG | + | chr4_4:70033268-70033287 | Msa0699400:CDS | 40.0% | |
| GGATATGGAATTCAACACAG+AGG | + | chr4_4:70033372-70033391 | Msa0699400:CDS | 40.0% | |
| TTCGAATGGTTGTCCTAGAT+CGG | - | chr4_4:70033551-70033570 | None:intergenic | 40.0% | |
| AATGCGCTAGAGCTAATTCA+TGG | - | chr4_4:70033655-70033674 | None:intergenic | 40.0% | |
| TGTCAGAGCATGTCATATCT+TGG | + | chr4_4:70033751-70033770 | Msa0699400:CDS | 40.0% | |
| GTCAGAGCATGTCATATCTT+GGG | + | chr4_4:70033752-70033771 | Msa0699400:CDS | 40.0% | |
| ATTTCACGGATCATCAAGCA+AGG | + | chr4_4:70033837-70033856 | Msa0699400:CDS | 40.0% | |
| TTTCACGGATCATCAAGCAA+GGG | + | chr4_4:70033838-70033857 | Msa0699400:CDS | 40.0% | |
| TAATAGAGATGCAGACGGTG+TGG | + | chr4_4:70033249-70033268 | Msa0699400:CDS | 45.0% | |
| CACTGCAAACACCATTACCA+TGG | - | chr4_4:70033282-70033301 | None:intergenic | 45.0% | |
| AATGGTGTTTGCAGTGAGCA+AGG | + | chr4_4:70033286-70033305 | Msa0699400:CDS | 45.0% | |
| ATGGTGTTTGCAGTGAGCAA+GGG | + | chr4_4:70033287-70033306 | Msa0699400:CDS | 45.0% | |
| GTAATGTTTGCGAGATGCCA+CGG | + | chr4_4:70033415-70033434 | Msa0699400:CDS | 45.0% | |
| TAATGTTTGCGAGATGCCAC+GGG | + | chr4_4:70033416-70033435 | Msa0699400:CDS | 45.0% | |
| AAAAGAATGGCAGCCGATCT+AGG | + | chr4_4:70033535-70033554 | Msa0699400:CDS | 45.0% | |
| CGCACAACAGTTAGTTCGAA+TGG | - | chr4_4:70033565-70033584 | None:intergenic | 45.0% | |
| TGATAAACCCAAGCCCTTCA+TGG | - | chr4_4:70033802-70033821 | None:intergenic | 45.0% | |
| AGGGCTTGGGTTTATCAGAA+AGG | + | chr4_4:70033805-70033824 | Msa0699400:CDS | 45.0% | |
| TAATAGAGATGCAGACGGTG+TGG | + | chr4_4:70033249-70033268 | Msa0699400:CDS | 45.0% | |
| CACTGCAAACACCATTACCA+TGG | - | chr4_4:70033282-70033301 | None:intergenic | 45.0% | |
| AATGGTGTTTGCAGTGAGCA+AGG | + | chr4_4:70033286-70033305 | Msa0699400:CDS | 45.0% | |
| ATGGTGTTTGCAGTGAGCAA+GGG | + | chr4_4:70033287-70033306 | Msa0699400:CDS | 45.0% | |
| GTAATGTTTGCGAGATGCCA+CGG | + | chr4_4:70033415-70033434 | Msa0699400:CDS | 45.0% | |
| TAATGTTTGCGAGATGCCAC+GGG | + | chr4_4:70033416-70033435 | Msa0699400:CDS | 45.0% | |
| AAAAGAATGGCAGCCGATCT+AGG | + | chr4_4:70033535-70033554 | Msa0699400:CDS | 45.0% | |
| CGCACAACAGTTAGTTCGAA+TGG | - | chr4_4:70033565-70033584 | None:intergenic | 45.0% | |
| TGATAAACCCAAGCCCTTCA+TGG | - | chr4_4:70033802-70033821 | None:intergenic | 45.0% | |
| AGGGCTTGGGTTTATCAGAA+AGG | + | chr4_4:70033805-70033824 | Msa0699400:CDS | 45.0% | |
| GACGGTGTGGAATTCAACCA+TGG | + | chr4_4:70033262-70033281 | Msa0699400:CDS | 50.0% | |
| CAAGGGAAAGAGAACTCCGA+TGG | + | chr4_4:70033304-70033323 | Msa0699400:CDS | 50.0% | |
| GTTAGTGGCCTGCATTCACA+AGG | + | chr4_4:70033728-70033747 | Msa0699400:CDS | 50.0% | |
| CTCTGACACCTTGTGAATGC+AGG | - | chr4_4:70033739-70033758 | None:intergenic | 50.0% | |
| GTGAAAAGGGTGGCCATGAA+GGG | + | chr4_4:70033786-70033805 | Msa0699400:CDS | 50.0% | |
| GACGGTGTGGAATTCAACCA+TGG | + | chr4_4:70033262-70033281 | Msa0699400:CDS | 50.0% | |
| CAAGGGAAAGAGAACTCCGA+TGG | + | chr4_4:70033304-70033323 | Msa0699400:CDS | 50.0% | |
| GTTAGTGGCCTGCATTCACA+AGG | + | chr4_4:70033728-70033747 | Msa0699400:CDS | 50.0% | |
| CTCTGACACCTTGTGAATGC+AGG | - | chr4_4:70033739-70033758 | None:intergenic | 50.0% | |
| GTGAAAAGGGTGGCCATGAA+GGG | + | chr4_4:70033786-70033805 | Msa0699400:CDS | 50.0% | |
| CCTTTCTTACGGCAAACCCG+TGG | - | chr4_4:70033435-70033454 | None:intergenic | 55.0% | |
| CCACGGGTTTGCCGTAAGAA+AGG | + | chr4_4:70033432-70033451 | Msa0699400:CDS | 55.0% | |
| GGTGAAAAGGGTGGCCATGA+AGG | + | chr4_4:70033785-70033804 | Msa0699400:CDS | 55.0% | |
| CCTTTCTTACGGCAAACCCG+TGG | - | chr4_4:70033435-70033454 | None:intergenic | 55.0% | |
| CCACGGGTTTGCCGTAAGAA+AGG | + | chr4_4:70033432-70033451 | Msa0699400:CDS | 55.0% | |
| GGTGAAAAGGGTGGCCATGA+AGG | + | chr4_4:70033785-70033804 | Msa0699400:CDS | 55.0% | |
| AAGGGTGGCCATGAAGGGCT+TGG | + | chr4_4:70033791-70033810 | Msa0699400:CDS | 60.0% | |
| AGGGTGGCCATGAAGGGCTT+GGG | + | chr4_4:70033792-70033811 | Msa0699400:CDS | 60.0% | |
| AAGGGTGGCCATGAAGGGCT+TGG | + | chr4_4:70033791-70033810 | Msa0699400:CDS | 60.0% | |
| AGGGTGGCCATGAAGGGCTT+GGG | + | chr4_4:70033792-70033811 | Msa0699400:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 70033095 | 70033910 | 70033095 | ID=Msa0699400;Name=Msa0699400 |
| chr4_4 | mRNA | 70033095 | 70033910 | 70033095 | ID=Msa0699400-mRNA-1;Parent=Msa0699400;Name=Msa0699400-mRNA-1;_AED=0.10;_eAED=0.10;_QI=14|0|0|1|0|0|3|0|243 |
| chr4_4 | exon | 70033095 | 70033325 | 70033095 | ID=Msa0699400-mRNA-1:exon:21162;Parent=Msa0699400-mRNA-1 |
| chr4_4 | exon | 70033353 | 70033579 | 70033353 | ID=Msa0699400-mRNA-1:exon:21163;Parent=Msa0699400-mRNA-1 |
| chr4_4 | exon | 70033626 | 70033910 | 70033626 | ID=Msa0699400-mRNA-1:exon:21164;Parent=Msa0699400-mRNA-1 |
| chr4_4 | five_prime_UTR | 70033095 | 70033108 | 70033095 | ID=Msa0699400-mRNA-1:five_prime_utr;Parent=Msa0699400-mRNA-1 |
| chr4_4 | CDS | 70033109 | 70033325 | 70033109 | ID=Msa0699400-mRNA-1:cds;Parent=Msa0699400-mRNA-1 |
| chr4_4 | CDS | 70033353 | 70033579 | 70033353 | ID=Msa0699400-mRNA-1:cds;Parent=Msa0699400-mRNA-1 |
| chr4_4 | CDS | 70033626 | 70033910 | 70033626 | ID=Msa0699400-mRNA-1:cds;Parent=Msa0699400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
