Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708590 | AES62325.1 | 81.595 | 326 | 24 | 4 | 1 | 326 | 1 | 290 | 0.0 | 524 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708590 | sp|Q8RYD1|REM16_ARATH | 26.846 | 298 | 173 | 15 | 43 | 325 | 55 | 322 | 2.46e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708590 | G7IBX1 | 81.595 | 326 | 24 | 4 | 1 | 326 | 1 | 290 | 0.0 | 524 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0708590 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708590 | MtrunA17_Chr1g0208771 | 27.273 | 308 | 184 | 9 | 30 | 326 | 16 | 294 | 5.75e-22 | 95.9 |
| Msa0708590 | MtrunA17_Chr7g0233541 | 25.733 | 307 | 191 | 8 | 26 | 322 | 1 | 280 | 9.89e-22 | 93.2 |
| Msa0708590 | MtrunA17_Chr1g0163071 | 26.537 | 309 | 169 | 9 | 41 | 325 | 16 | 290 | 7.69e-20 | 88.2 |
| Msa0708590 | MtrunA17_Chr3g0131891 | 24.923 | 325 | 198 | 10 | 12 | 326 | 19 | 307 | 2.08e-19 | 87.4 |
| Msa0708590 | MtrunA17_Chr7g0233521 | 24.834 | 302 | 183 | 8 | 26 | 322 | 1 | 263 | 1.38e-18 | 84.3 |
| Msa0708590 | MtrunA17_Chr4g0067431 | 25.150 | 334 | 189 | 11 | 12 | 321 | 15 | 311 | 1.85e-15 | 75.9 |
| Msa0708590 | MtrunA17_Chr1g0163251 | 26.370 | 292 | 175 | 9 | 34 | 323 | 28 | 281 | 8.25e-13 | 68.6 |
| Msa0708590 | MtrunA17_Chr7g0233531 | 35.398 | 113 | 67 | 3 | 216 | 322 | 151 | 263 | 1.43e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708590 | AT4G33280.1 | 26.846 | 298 | 173 | 15 | 43 | 325 | 55 | 322 | 2.50e-12 | 67.4 |
Find 48 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTTTGAGTAGTAAATTT+TGG | 0.102919 | 4_4:+82145506 | Msa0708590:CDS |
| AACAGGAGAGTGCTATGTTT+TGG | 0.285292 | 4_4:+82147497 | Msa0708590:CDS |
| TGATAAAACCACATGGCTAT+TGG | 0.295086 | 4_4:+82145564 | Msa0708590:CDS |
| TTGTTGAGGCGAAGAGATTT+TGG | 0.299523 | 4_4:+82147521 | Msa0708590:CDS |
| AGACGATCCCCTAATGTTAT+AGG | 0.308510 | 4_4:-82147111 | None:intergenic |
| AGCCTTCTTGCTGAGATATC+TGG | 0.323467 | 4_4:+82145880 | Msa0708590:CDS |
| GACGATCCCCTAATGTTATA+GGG | 0.333503 | 4_4:-82147110 | None:intergenic |
| GAGAAGTCCCCTATAACATT+AGG | 0.337292 | 4_4:+82147102 | Msa0708590:CDS |
| AGAAGTCCCCTATAACATTA+GGG | 0.380144 | 4_4:+82147103 | Msa0708590:CDS |
| TCAGGAAGCTGAAGACATAT+AGG | 0.408366 | 4_4:-82145544 | None:intergenic |
| AGAAGGCTGCGATAGCGTTT+AGG | 0.433134 | 4_4:-82145865 | None:intergenic |
| CAGGAAGCTGAAGACATATA+GGG | 0.442300 | 4_4:-82145543 | None:intergenic |
| GTTGTGACTGCGGCAAGCCT+TGG | 0.444590 | 4_4:-82147195 | None:intergenic |
| AGCGTTTAGGCTCCTCTTGT+TGG | 0.449128 | 4_4:-82145852 | None:intergenic |
| AAACCACATGGCTATTGGAT+TGG | 0.454515 | 4_4:+82145569 | Msa0708590:CDS |
| CTTAACAACACGTCAACAAC+AGG | 0.469084 | 4_4:+82147480 | Msa0708590:CDS |
| AAATATGCTGATGGGATATG+AGG | 0.485987 | 4_4:-82145695 | None:intergenic |
| TTTAGGCTCCTCTTGTTGGT+TGG | 0.495993 | 4_4:-82145848 | None:intergenic |
| TGAATGTAGCACTGGAGCAT+TGG | 0.496562 | 4_4:+82147166 | Msa0708590:CDS |
| TTAAAGCTTAACTCTTGCAA+TGG | 0.504842 | 4_4:+82147553 | Msa0708590:CDS |
| CATTTCTTTGAATGTGTGAT+GGG | 0.511289 | 4_4:-82147241 | None:intergenic |
| ACGGGCATTGTCATTTGAGA+TGG | 0.514098 | 4_4:-82145910 | None:intergenic |
| GGATAGGTTAAATATGCTGA+TGG | 0.514655 | 4_4:-82145704 | None:intergenic |
| GGAAAACAAGGAGGATAGCA+TGG | 0.518866 | 4_4:-82145761 | None:intergenic |
| TCATCAAATCGTCGTTTCGA+AGG | 0.518996 | 4_4:-82145480 | None:intergenic |
| ACACATTCAAAGAAATGTGC+TGG | 0.535216 | 4_4:+82147247 | Msa0708590:CDS |
| GGTTTCCCATGGGGAAAACA+AGG | 0.540143 | 4_4:-82145773 | None:intergenic |
| CTCATGTGTTATTAAACAAG+TGG | 0.542298 | 4_4:+82145608 | Msa0708590:CDS |
| ACATTTCTTTGAATGTGTGA+TGG | 0.547251 | 4_4:-82147242 | None:intergenic |
| GAAGCTATTGAATGTAGCAC+TGG | 0.555894 | 4_4:+82147158 | Msa0708590:CDS |
| AGATGATAATAAGAAACTGC+AGG | 0.560494 | 4_4:-82145808 | None:intergenic |
| GAAGAAAACCAACCAACAAG+AGG | 0.567197 | 4_4:+82145840 | Msa0708590:CDS |
| GATAGGTTAAATATGCTGAT+GGG | 0.588873 | 4_4:-82145703 | None:intergenic |
| TGTGTTATTAAACAAGTGGA+AGG | 0.590126 | 4_4:+82145612 | Msa0708590:CDS |
| GAAAACAAGGAGGATAGCAT+GGG | 0.593037 | 4_4:-82145760 | None:intergenic |
| ACGGACAATAAATTGAAACT+AGG | 0.597678 | 4_4:+82147613 | Msa0708590:CDS |
| GTCCAGATATCTCAGCAAGA+AGG | 0.611666 | 4_4:-82145882 | None:intergenic |
| ACGATCCCCTAATGTTATAG+GGG | 0.623647 | 4_4:-82147109 | None:intergenic |
| GATCGTCTACTATGAAACAA+AGG | 0.633191 | 4_4:+82147126 | Msa0708590:CDS |
| GAAGTCCCCTATAACATTAG+GGG | 0.636342 | 4_4:+82147104 | Msa0708590:CDS |
| TGGAGCATTGGAGAGAGCCA+AGG | 0.647399 | 4_4:+82147178 | Msa0708590:CDS |
| GTCTACTATGAAACAAAGGA+AGG | 0.652860 | 4_4:+82147130 | Msa0708590:CDS |
| CGTGTTGTTAAGAAGTTGCG+CGG | 0.667200 | 4_4:-82147469 | None:intergenic |
| TGAAAGATTTGTTGTGACTG+CGG | 0.679005 | 4_4:-82147205 | None:intergenic |
| TTTCCAATCCAATAGCCATG+TGG | 0.687940 | 4_4:-82145572 | None:intergenic |
| AGCTTCCTGATAAAACCACA+TGG | 0.693997 | 4_4:+82145557 | Msa0708590:CDS |
| TTCCCATGGGGAAAACAAGG+AGG | 0.706970 | 4_4:-82145770 | None:intergenic |
| AAAACAAGGAGGATAGCATG+GGG | 0.772194 | 4_4:-82145759 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAACAACTTAATTTA+AGG | - | chr4_4:82146009-82146028 | None:intergenic | 10.0% |
| !!! | TAAGTTGTTTTTAATTTTTA+CGG | + | chr4_4:82146014-82146033 | Msa0708590:intron | 10.0% |
| !! | ATTAAAAACAACTTAATTTA+AGG | - | chr4_4:82146009-82146028 | None:intergenic | 10.0% |
| !!! | TAAGTTGTTTTTAATTTTTA+CGG | + | chr4_4:82146014-82146033 | Msa0708590:intron | 10.0% |
| !! | TCTAATGATTAAAAAATCAT+AGG | + | chr4_4:82146195-82146214 | Msa0708590:intron | 15.0% |
| !! | CTAATGATTAAAAAATCATA+GGG | + | chr4_4:82146196-82146215 | Msa0708590:intron | 15.0% |
| !!! | CAATTATTATAACTTGTTAT+TGG | - | chr4_4:82147340-82147359 | None:intergenic | 15.0% |
| !! | TCTAATGATTAAAAAATCAT+AGG | + | chr4_4:82146195-82146214 | Msa0708590:intron | 15.0% |
| !! | CTAATGATTAAAAAATCATA+GGG | + | chr4_4:82146196-82146215 | Msa0708590:intron | 15.0% |
| !!! | CAATTATTATAACTTGTTAT+TGG | - | chr4_4:82147340-82147359 | None:intergenic | 15.0% |
| !!! | ATCAATAATTTTGCAAAACT+TGG | - | chr4_4:82145452-82145471 | None:intergenic | 20.0% |
| !! | TTAATTTAAGGAAACAAAAC+GGG | - | chr4_4:82145997-82146016 | None:intergenic | 20.0% |
| !! | CTTAATTTAAGGAAACAAAA+CGG | - | chr4_4:82145998-82146017 | None:intergenic | 20.0% |
| !!! | GCATCTCAAATTATTTTAAT+AGG | + | chr4_4:82147071-82147090 | Msa0708590:intron | 20.0% |
| !!! | AAATATCTTTTAATGATGGT+TGG | + | chr4_4:82147578-82147597 | Msa0708590:CDS | 20.0% |
| !!! | ATCAATAATTTTGCAAAACT+TGG | - | chr4_4:82145452-82145471 | None:intergenic | 20.0% |
| !! | TTAATTTAAGGAAACAAAAC+GGG | - | chr4_4:82145997-82146016 | None:intergenic | 20.0% |
| !! | CTTAATTTAAGGAAACAAAA+CGG | - | chr4_4:82145998-82146017 | None:intergenic | 20.0% |
| !!! | GCATCTCAAATTATTTTAAT+AGG | + | chr4_4:82147071-82147090 | Msa0708590:intron | 20.0% |
| !!! | AAATATCTTTTAATGATGGT+TGG | + | chr4_4:82147578-82147597 | Msa0708590:CDS | 20.0% |
| !!! | AGCTTTGAGTAGTAAATTTT+GGG | + | chr4_4:82145507-82145526 | Msa0708590:CDS | 25.0% |
| ! | ATAAAAATCTGCATACTCAA+CGG | - | chr4_4:82145932-82145951 | None:intergenic | 25.0% |
| ! | TAATTTAAGGAAACAAAACG+GGG | - | chr4_4:82145996-82146015 | None:intergenic | 25.0% |
| ! | AAAATAGTAGCAATACAATC+CGG | + | chr4_4:82146049-82146068 | Msa0708590:intron | 25.0% |
| ! | TTAACTAAGACAGCTATATA+CGG | - | chr4_4:82146101-82146120 | None:intergenic | 25.0% |
| ! | TGATTAAAAAATCATAGGGT+AGG | + | chr4_4:82146200-82146219 | Msa0708590:intron | 25.0% |
| ! | GATTAAAAAATCATAGGGTA+GGG | + | chr4_4:82146201-82146220 | Msa0708590:intron | 25.0% |
| ! | GCTTAACAATGATATATTTG+AGG | - | chr4_4:82146445-82146464 | None:intergenic | 25.0% |
| !! | ACTTTTATGCATAACAAAGT+TGG | - | chr4_4:82146608-82146627 | None:intergenic | 25.0% |
| ! | TTAAAATTGTGGGATGAAAT+GGG | - | chr4_4:82146791-82146810 | None:intergenic | 25.0% |
| !! | TTTAAAATTGTGGGATGAAA+TGG | - | chr4_4:82146792-82146811 | None:intergenic | 25.0% |
| !! | AAGCTGGTATTTAAAATTGT+GGG | - | chr4_4:82146801-82146820 | None:intergenic | 25.0% |
| !! | AAAGCTGGTATTTAAAATTG+TGG | - | chr4_4:82146802-82146821 | None:intergenic | 25.0% |
| ! | ATATCCACATGTAAAATATG+TGG | + | chr4_4:82146908-82146927 | Msa0708590:intron | 25.0% |
| ! | ATCAAAAACTACAACTTTGA+TGG | + | chr4_4:82147006-82147025 | Msa0708590:intron | 25.0% |
| ! | ATGATAAAAACTGTCAAAAC+AGG | + | chr4_4:82147441-82147460 | Msa0708590:intron | 25.0% |
| !! | GGACAAATATCTTTTAATGA+TGG | + | chr4_4:82147574-82147593 | Msa0708590:CDS | 25.0% |
| ! | ACAACTTCAAAAAAAAGTCT+TGG | - | chr4_4:82147670-82147689 | None:intergenic | 25.0% |
| !!! | AGCTTTGAGTAGTAAATTTT+GGG | + | chr4_4:82145507-82145526 | Msa0708590:CDS | 25.0% |
| ! | ATAAAAATCTGCATACTCAA+CGG | - | chr4_4:82145932-82145951 | None:intergenic | 25.0% |
| ! | TAATTTAAGGAAACAAAACG+GGG | - | chr4_4:82145996-82146015 | None:intergenic | 25.0% |
| ! | AAAATAGTAGCAATACAATC+CGG | + | chr4_4:82146049-82146068 | Msa0708590:intron | 25.0% |
| ! | TTAACTAAGACAGCTATATA+CGG | - | chr4_4:82146101-82146120 | None:intergenic | 25.0% |
| ! | TGATTAAAAAATCATAGGGT+AGG | + | chr4_4:82146200-82146219 | Msa0708590:intron | 25.0% |
| ! | GATTAAAAAATCATAGGGTA+GGG | + | chr4_4:82146201-82146220 | Msa0708590:intron | 25.0% |
| ! | GCTTAACAATGATATATTTG+AGG | - | chr4_4:82146445-82146464 | None:intergenic | 25.0% |
| !! | ACTTTTATGCATAACAAAGT+TGG | - | chr4_4:82146608-82146627 | None:intergenic | 25.0% |
| ! | TTAAAATTGTGGGATGAAAT+GGG | - | chr4_4:82146791-82146810 | None:intergenic | 25.0% |
| !! | TTTAAAATTGTGGGATGAAA+TGG | - | chr4_4:82146792-82146811 | None:intergenic | 25.0% |
| !! | AAGCTGGTATTTAAAATTGT+GGG | - | chr4_4:82146801-82146820 | None:intergenic | 25.0% |
| !! | AAAGCTGGTATTTAAAATTG+TGG | - | chr4_4:82146802-82146821 | None:intergenic | 25.0% |
| ! | ATATCCACATGTAAAATATG+TGG | + | chr4_4:82146908-82146927 | Msa0708590:intron | 25.0% |
| ! | ATCAAAAACTACAACTTTGA+TGG | + | chr4_4:82147006-82147025 | Msa0708590:intron | 25.0% |
| ! | ATGATAAAAACTGTCAAAAC+AGG | + | chr4_4:82147441-82147460 | Msa0708590:intron | 25.0% |
| !! | GGACAAATATCTTTTAATGA+TGG | + | chr4_4:82147574-82147593 | Msa0708590:CDS | 25.0% |
| ! | ACAACTTCAAAAAAAAGTCT+TGG | - | chr4_4:82147670-82147689 | None:intergenic | 25.0% |
| !!! | CAGCTTTGAGTAGTAAATTT+TGG | + | chr4_4:82145506-82145525 | Msa0708590:CDS | 30.0% |
| ! | CTCATGTGTTATTAAACAAG+TGG | + | chr4_4:82145608-82145627 | Msa0708590:CDS | 30.0% |
| ! | TGTGTTATTAAACAAGTGGA+AGG | + | chr4_4:82145612-82145631 | Msa0708590:CDS | 30.0% |
| GATAGGTTAAATATGCTGAT+GGG | - | chr4_4:82145706-82145725 | None:intergenic | 30.0% | |
| CAGTTTCATCAAAAATGGAT+AGG | - | chr4_4:82145723-82145742 | None:intergenic | 30.0% | |
| !! | CTATCCATTTTTGATGAAAC+TGG | + | chr4_4:82145721-82145740 | Msa0708590:CDS | 30.0% |
| AGATGATAATAAGAAACTGC+AGG | - | chr4_4:82145811-82145830 | None:intergenic | 30.0% | |
| TAAAAATCTGCATACTCAAC+GGG | - | chr4_4:82145931-82145950 | None:intergenic | 30.0% | |
| !!! | ACCTCTTTTTTTAGGTTTTG+CGG | - | chr4_4:82145956-82145975 | None:intergenic | 30.0% |
| !!! | ACTCATGTACCTCTTTTTTT+AGG | - | chr4_4:82145964-82145983 | None:intergenic | 30.0% |
| !!! | TCAAGTTTTTGATTTGTTGC+CGG | - | chr4_4:82146071-82146090 | None:intergenic | 30.0% |
| !!! | TATTAGTTTTATCAGCGTGT+CGG | + | chr4_4:82146333-82146352 | Msa0708590:intron | 30.0% |
| ! | AGAACCACATATTTTACATG+TGG | - | chr4_4:82146915-82146934 | None:intergenic | 30.0% |
| GTCATGTTGCTATAGAAATT+TGG | - | chr4_4:82146964-82146983 | None:intergenic | 30.0% | |
| CATTTCTTTGAATGTGTGAT+GGG | - | chr4_4:82147244-82147263 | None:intergenic | 30.0% | |
| ACATTTCTTTGAATGTGTGA+TGG | - | chr4_4:82147245-82147264 | None:intergenic | 30.0% | |
| TTAAAGCTTAACTCTTGCAA+TGG | + | chr4_4:82147553-82147572 | Msa0708590:CDS | 30.0% | |
| ACGGACAATAAATTGAAACT+AGG | + | chr4_4:82147613-82147632 | Msa0708590:CDS | 30.0% | |
| !!! | CAGCTTTGAGTAGTAAATTT+TGG | + | chr4_4:82145506-82145525 | Msa0708590:CDS | 30.0% |
| ! | CTCATGTGTTATTAAACAAG+TGG | + | chr4_4:82145608-82145627 | Msa0708590:CDS | 30.0% |
| ! | TGTGTTATTAAACAAGTGGA+AGG | + | chr4_4:82145612-82145631 | Msa0708590:CDS | 30.0% |
| GATAGGTTAAATATGCTGAT+GGG | - | chr4_4:82145706-82145725 | None:intergenic | 30.0% | |
| CAGTTTCATCAAAAATGGAT+AGG | - | chr4_4:82145723-82145742 | None:intergenic | 30.0% | |
| !! | CTATCCATTTTTGATGAAAC+TGG | + | chr4_4:82145721-82145740 | Msa0708590:CDS | 30.0% |
| AGATGATAATAAGAAACTGC+AGG | - | chr4_4:82145811-82145830 | None:intergenic | 30.0% | |
| TAAAAATCTGCATACTCAAC+GGG | - | chr4_4:82145931-82145950 | None:intergenic | 30.0% | |
| !!! | ACCTCTTTTTTTAGGTTTTG+CGG | - | chr4_4:82145956-82145975 | None:intergenic | 30.0% |
| !!! | ACTCATGTACCTCTTTTTTT+AGG | - | chr4_4:82145964-82145983 | None:intergenic | 30.0% |
| !!! | TCAAGTTTTTGATTTGTTGC+CGG | - | chr4_4:82146071-82146090 | None:intergenic | 30.0% |
| !!! | TATTAGTTTTATCAGCGTGT+CGG | + | chr4_4:82146333-82146352 | Msa0708590:intron | 30.0% |
| ! | AGAACCACATATTTTACATG+TGG | - | chr4_4:82146915-82146934 | None:intergenic | 30.0% |
| GTCATGTTGCTATAGAAATT+TGG | - | chr4_4:82146964-82146983 | None:intergenic | 30.0% | |
| CATTTCTTTGAATGTGTGAT+GGG | - | chr4_4:82147244-82147263 | None:intergenic | 30.0% | |
| ACATTTCTTTGAATGTGTGA+TGG | - | chr4_4:82147245-82147264 | None:intergenic | 30.0% | |
| TTAAAGCTTAACTCTTGCAA+TGG | + | chr4_4:82147553-82147572 | Msa0708590:CDS | 30.0% | |
| ACGGACAATAAATTGAAACT+AGG | + | chr4_4:82147613-82147632 | Msa0708590:CDS | 30.0% | |
| !!! | AATAGCCATGTGGTTTTATC+AGG | - | chr4_4:82145565-82145584 | None:intergenic | 35.0% |
| TGATAAAACCACATGGCTAT+TGG | + | chr4_4:82145564-82145583 | Msa0708590:CDS | 35.0% | |
| AAATATGCTGATGGGATATG+AGG | - | chr4_4:82145698-82145717 | None:intergenic | 35.0% | |
| GGATAGGTTAAATATGCTGA+TGG | - | chr4_4:82145707-82145726 | None:intergenic | 35.0% | |
| !!! | TTGTTGTTTTGGTTTCCCAT+GGG | - | chr4_4:82145786-82145805 | None:intergenic | 35.0% |
| !!! | TTTGTTGTTTTGGTTTCCCA+TGG | - | chr4_4:82145787-82145806 | None:intergenic | 35.0% |
| !!! | AACTGCAGGTTTTGTTGTTT+TGG | - | chr4_4:82145797-82145816 | None:intergenic | 35.0% |
| ACCGCAAAACCTAAAAAAAG+AGG | + | chr4_4:82145952-82145971 | Msa0708590:CDS | 35.0% | |
| TAGCTGTCTTAGTTAATTCG+TGG | + | chr4_4:82146105-82146124 | Msa0708590:intron | 35.0% | |
| ! | TAATTCGTGGACTACCATAT+TGG | + | chr4_4:82146118-82146137 | Msa0708590:intron | 35.0% |
| CTATAGAAGGCAAACCAATA+TGG | - | chr4_4:82146135-82146154 | None:intergenic | 35.0% | |
| !! | TTCAAATGGATGGGTTAAGT+GGG | - | chr4_4:82146468-82146487 | None:intergenic | 35.0% |
| !! | TTTCAAATGGATGGGTTAAG+TGG | - | chr4_4:82146469-82146488 | None:intergenic | 35.0% |
| TTGCAAGCTTTCAAATGGAT+GGG | - | chr4_4:82146477-82146496 | None:intergenic | 35.0% | |
| ATGTGCATTAGAAGTCATGA+GGG | - | chr4_4:82146578-82146597 | None:intergenic | 35.0% | |
| TATGTGCATTAGAAGTCATG+AGG | - | chr4_4:82146579-82146598 | None:intergenic | 35.0% | |
| AGAAGTCCCCTATAACATTA+GGG | + | chr4_4:82147103-82147122 | Msa0708590:CDS | 35.0% | |
| GATCGTCTACTATGAAACAA+AGG | + | chr4_4:82147126-82147145 | Msa0708590:CDS | 35.0% | |
| GTCTACTATGAAACAAAGGA+AGG | + | chr4_4:82147130-82147149 | Msa0708590:CDS | 35.0% | |
| !! | TGAAAGATTTGTTGTGACTG+CGG | - | chr4_4:82147208-82147227 | None:intergenic | 35.0% |
| ACACATTCAAAGAAATGTGC+TGG | + | chr4_4:82147247-82147266 | Msa0708590:CDS | 35.0% | |
| GTAAGTTTGTGCTACATTTC+TGG | + | chr4_4:82147269-82147288 | Msa0708590:intron | 35.0% | |
| ! | TGGTTGGAAGAATTTTGTCA+CGG | + | chr4_4:82147594-82147613 | Msa0708590:CDS | 35.0% |
| !!! | AATAGCCATGTGGTTTTATC+AGG | - | chr4_4:82145565-82145584 | None:intergenic | 35.0% |
| TGATAAAACCACATGGCTAT+TGG | + | chr4_4:82145564-82145583 | Msa0708590:CDS | 35.0% | |
| AAATATGCTGATGGGATATG+AGG | - | chr4_4:82145698-82145717 | None:intergenic | 35.0% | |
| GGATAGGTTAAATATGCTGA+TGG | - | chr4_4:82145707-82145726 | None:intergenic | 35.0% | |
| !!! | TTGTTGTTTTGGTTTCCCAT+GGG | - | chr4_4:82145786-82145805 | None:intergenic | 35.0% |
| !!! | TTTGTTGTTTTGGTTTCCCA+TGG | - | chr4_4:82145787-82145806 | None:intergenic | 35.0% |
| !!! | AACTGCAGGTTTTGTTGTTT+TGG | - | chr4_4:82145797-82145816 | None:intergenic | 35.0% |
| ACCGCAAAACCTAAAAAAAG+AGG | + | chr4_4:82145952-82145971 | Msa0708590:CDS | 35.0% | |
| TAGCTGTCTTAGTTAATTCG+TGG | + | chr4_4:82146105-82146124 | Msa0708590:intron | 35.0% | |
| ! | TAATTCGTGGACTACCATAT+TGG | + | chr4_4:82146118-82146137 | Msa0708590:intron | 35.0% |
| CTATAGAAGGCAAACCAATA+TGG | - | chr4_4:82146135-82146154 | None:intergenic | 35.0% | |
| !! | TTCAAATGGATGGGTTAAGT+GGG | - | chr4_4:82146468-82146487 | None:intergenic | 35.0% |
| !! | TTTCAAATGGATGGGTTAAG+TGG | - | chr4_4:82146469-82146488 | None:intergenic | 35.0% |
| TTGCAAGCTTTCAAATGGAT+GGG | - | chr4_4:82146477-82146496 | None:intergenic | 35.0% | |
| ATGTGCATTAGAAGTCATGA+GGG | - | chr4_4:82146578-82146597 | None:intergenic | 35.0% | |
| TATGTGCATTAGAAGTCATG+AGG | - | chr4_4:82146579-82146598 | None:intergenic | 35.0% | |
| AGAAGTCCCCTATAACATTA+GGG | + | chr4_4:82147103-82147122 | Msa0708590:CDS | 35.0% | |
| GATCGTCTACTATGAAACAA+AGG | + | chr4_4:82147126-82147145 | Msa0708590:CDS | 35.0% | |
| GTCTACTATGAAACAAAGGA+AGG | + | chr4_4:82147130-82147149 | Msa0708590:CDS | 35.0% | |
| !! | TGAAAGATTTGTTGTGACTG+CGG | - | chr4_4:82147208-82147227 | None:intergenic | 35.0% |
| ACACATTCAAAGAAATGTGC+TGG | + | chr4_4:82147247-82147266 | Msa0708590:CDS | 35.0% | |
| GTAAGTTTGTGCTACATTTC+TGG | + | chr4_4:82147269-82147288 | Msa0708590:intron | 35.0% | |
| ! | TGGTTGGAAGAATTTTGTCA+CGG | + | chr4_4:82147594-82147613 | Msa0708590:CDS | 35.0% |
| TCATCAAATCGTCGTTTCGA+AGG | - | chr4_4:82145483-82145502 | None:intergenic | 40.0% | |
| CAGGAAGCTGAAGACATATA+GGG | - | chr4_4:82145546-82145565 | None:intergenic | 40.0% | |
| TCAGGAAGCTGAAGACATAT+AGG | - | chr4_4:82145547-82145566 | None:intergenic | 40.0% | |
| AGCTTCCTGATAAAACCACA+TGG | + | chr4_4:82145557-82145576 | Msa0708590:CDS | 40.0% | |
| AAACCACATGGCTATTGGAT+TGG | + | chr4_4:82145569-82145588 | Msa0708590:CDS | 40.0% | |
| TTTCCAATCCAATAGCCATG+TGG | - | chr4_4:82145575-82145594 | None:intergenic | 40.0% | |
| CGTGCCAGTTTCATCAAAAA+TGG | - | chr4_4:82145728-82145747 | None:intergenic | 40.0% | |
| AAAACAAGGAGGATAGCATG+GGG | - | chr4_4:82145762-82145781 | None:intergenic | 40.0% | |
| GAAAACAAGGAGGATAGCAT+GGG | - | chr4_4:82145763-82145782 | None:intergenic | 40.0% | |
| !!! | TGTTGTTTTGGTTTCCCATG+GGG | - | chr4_4:82145785-82145804 | None:intergenic | 40.0% |
| GAAGAAAACCAACCAACAAG+AGG | + | chr4_4:82145840-82145859 | Msa0708590:CDS | 40.0% | |
| ! | CGTTGGTTGAGTTCTATAGA+AGG | - | chr4_4:82146148-82146167 | None:intergenic | 40.0% |
| CCACTTATGTTCAAACTCGT+TGG | - | chr4_4:82146165-82146184 | None:intergenic | 40.0% | |
| CCAACGAGTTTGAACATAAG+TGG | + | chr4_4:82146162-82146181 | Msa0708590:intron | 40.0% | |
| ! | GCACGAACACTTTTCAGATT+AGG | + | chr4_4:82146234-82146253 | Msa0708590:intron | 40.0% |
| CAGATTTGTCTCCCTACTAA+CGG | - | chr4_4:82146374-82146393 | None:intergenic | 40.0% | |
| !! | TGAGGTTGATGCAAAAGTAG+TGG | - | chr4_4:82146427-82146446 | None:intergenic | 40.0% |
| !! | TCAAATGGATGGGTTAAGTG+GGG | - | chr4_4:82146467-82146486 | None:intergenic | 40.0% |
| GTTGCAAGCTTTCAAATGGA+TGG | - | chr4_4:82146478-82146497 | None:intergenic | 40.0% | |
| GTCTGTTGCAAGCTTTCAAA+TGG | - | chr4_4:82146482-82146501 | None:intergenic | 40.0% | |
| GTCATGAGGGGAATTTAACA+AGG | - | chr4_4:82146565-82146584 | None:intergenic | 40.0% | |
| TGTGCATTAGAAGTCATGAG+GGG | - | chr4_4:82146577-82146596 | None:intergenic | 40.0% | |
| CTCGACAAGTAATTGTTCGT+TGG | - | chr4_4:82146673-82146692 | None:intergenic | 40.0% | |
| ACGAACAATTACTTGTCGAG+CGG | + | chr4_4:82146673-82146692 | Msa0708590:intron | 40.0% | |
| GGCAGTGAGCAAAATTACAA+CGG | - | chr4_4:82146718-82146737 | None:intergenic | 40.0% | |
| TTGCTCACTGCCATTAATTG+AGG | + | chr4_4:82146726-82146745 | Msa0708590:intron | 40.0% | |
| TCACTGCCATTAATTGAGGA+AGG | + | chr4_4:82146730-82146749 | Msa0708590:intron | 40.0% | |
| CTGCATCCTTCCTCAATTAA+TGG | - | chr4_4:82146739-82146758 | None:intergenic | 40.0% | |
| TGTGGAGTTTATGAGAAAGC+TGG | - | chr4_4:82146817-82146836 | None:intergenic | 40.0% | |
| GTCTCACTTGAGACATGTTT+GGG | + | chr4_4:82146858-82146877 | Msa0708590:intron | 40.0% | |
| TCTCACTTGAGACATGTTTG+GGG | + | chr4_4:82146859-82146878 | Msa0708590:intron | 40.0% | |
| GAGAAGTCCCCTATAACATT+AGG | + | chr4_4:82147102-82147121 | Msa0708590:CDS | 40.0% | |
| GAAGTCCCCTATAACATTAG+GGG | + | chr4_4:82147104-82147123 | Msa0708590:CDS | 40.0% | |
| ACGATCCCCTAATGTTATAG+GGG | - | chr4_4:82147112-82147131 | None:intergenic | 40.0% | |
| GACGATCCCCTAATGTTATA+GGG | - | chr4_4:82147113-82147132 | None:intergenic | 40.0% | |
| AGACGATCCCCTAATGTTAT+AGG | - | chr4_4:82147114-82147133 | None:intergenic | 40.0% | |
| GAAGCTATTGAATGTAGCAC+TGG | + | chr4_4:82147158-82147177 | Msa0708590:CDS | 40.0% | |
| TTGGAGCTTAATTCTGCGAT+TGG | + | chr4_4:82147401-82147420 | Msa0708590:intron | 40.0% | |
| CTTAACAACACGTCAACAAC+AGG | + | chr4_4:82147480-82147499 | Msa0708590:CDS | 40.0% | |
| !!! | AACAGGAGAGTGCTATGTTT+TGG | + | chr4_4:82147497-82147516 | Msa0708590:CDS | 40.0% |
| !!! | ACAGGAGAGTGCTATGTTTT+GGG | + | chr4_4:82147498-82147517 | Msa0708590:CDS | 40.0% |
| !!! | TGCTATGTTTTGGGTTGTTG+AGG | + | chr4_4:82147507-82147526 | Msa0708590:CDS | 40.0% |
| ! | TTGTTGAGGCGAAGAGATTT+TGG | + | chr4_4:82147521-82147540 | Msa0708590:CDS | 40.0% |
| !! | GTGTGTTTTTCAGCTAGTTG+AGG | + | chr4_4:82147642-82147661 | Msa0708590:CDS | 40.0% |
| TCATCAAATCGTCGTTTCGA+AGG | - | chr4_4:82145483-82145502 | None:intergenic | 40.0% | |
| CAGGAAGCTGAAGACATATA+GGG | - | chr4_4:82145546-82145565 | None:intergenic | 40.0% | |
| TCAGGAAGCTGAAGACATAT+AGG | - | chr4_4:82145547-82145566 | None:intergenic | 40.0% | |
| AGCTTCCTGATAAAACCACA+TGG | + | chr4_4:82145557-82145576 | Msa0708590:CDS | 40.0% | |
| AAACCACATGGCTATTGGAT+TGG | + | chr4_4:82145569-82145588 | Msa0708590:CDS | 40.0% | |
| TTTCCAATCCAATAGCCATG+TGG | - | chr4_4:82145575-82145594 | None:intergenic | 40.0% | |
| CGTGCCAGTTTCATCAAAAA+TGG | - | chr4_4:82145728-82145747 | None:intergenic | 40.0% | |
| AAAACAAGGAGGATAGCATG+GGG | - | chr4_4:82145762-82145781 | None:intergenic | 40.0% | |
| GAAAACAAGGAGGATAGCAT+GGG | - | chr4_4:82145763-82145782 | None:intergenic | 40.0% | |
| !!! | TGTTGTTTTGGTTTCCCATG+GGG | - | chr4_4:82145785-82145804 | None:intergenic | 40.0% |
| GAAGAAAACCAACCAACAAG+AGG | + | chr4_4:82145840-82145859 | Msa0708590:CDS | 40.0% | |
| ! | CGTTGGTTGAGTTCTATAGA+AGG | - | chr4_4:82146148-82146167 | None:intergenic | 40.0% |
| CCACTTATGTTCAAACTCGT+TGG | - | chr4_4:82146165-82146184 | None:intergenic | 40.0% | |
| CCAACGAGTTTGAACATAAG+TGG | + | chr4_4:82146162-82146181 | Msa0708590:intron | 40.0% | |
| ! | GCACGAACACTTTTCAGATT+AGG | + | chr4_4:82146234-82146253 | Msa0708590:intron | 40.0% |
| CAGATTTGTCTCCCTACTAA+CGG | - | chr4_4:82146374-82146393 | None:intergenic | 40.0% | |
| !! | TGAGGTTGATGCAAAAGTAG+TGG | - | chr4_4:82146427-82146446 | None:intergenic | 40.0% |
| !! | TCAAATGGATGGGTTAAGTG+GGG | - | chr4_4:82146467-82146486 | None:intergenic | 40.0% |
| GTTGCAAGCTTTCAAATGGA+TGG | - | chr4_4:82146478-82146497 | None:intergenic | 40.0% | |
| GTCTGTTGCAAGCTTTCAAA+TGG | - | chr4_4:82146482-82146501 | None:intergenic | 40.0% | |
| GTCATGAGGGGAATTTAACA+AGG | - | chr4_4:82146565-82146584 | None:intergenic | 40.0% | |
| TGTGCATTAGAAGTCATGAG+GGG | - | chr4_4:82146577-82146596 | None:intergenic | 40.0% | |
| CTCGACAAGTAATTGTTCGT+TGG | - | chr4_4:82146673-82146692 | None:intergenic | 40.0% | |
| ACGAACAATTACTTGTCGAG+CGG | + | chr4_4:82146673-82146692 | Msa0708590:intron | 40.0% | |
| GGCAGTGAGCAAAATTACAA+CGG | - | chr4_4:82146718-82146737 | None:intergenic | 40.0% | |
| TTGCTCACTGCCATTAATTG+AGG | + | chr4_4:82146726-82146745 | Msa0708590:intron | 40.0% | |
| TCACTGCCATTAATTGAGGA+AGG | + | chr4_4:82146730-82146749 | Msa0708590:intron | 40.0% | |
| CTGCATCCTTCCTCAATTAA+TGG | - | chr4_4:82146739-82146758 | None:intergenic | 40.0% | |
| TGTGGAGTTTATGAGAAAGC+TGG | - | chr4_4:82146817-82146836 | None:intergenic | 40.0% | |
| GTCTCACTTGAGACATGTTT+GGG | + | chr4_4:82146858-82146877 | Msa0708590:intron | 40.0% | |
| TCTCACTTGAGACATGTTTG+GGG | + | chr4_4:82146859-82146878 | Msa0708590:intron | 40.0% | |
| GAGAAGTCCCCTATAACATT+AGG | + | chr4_4:82147102-82147121 | Msa0708590:CDS | 40.0% | |
| GAAGTCCCCTATAACATTAG+GGG | + | chr4_4:82147104-82147123 | Msa0708590:CDS | 40.0% | |
| ACGATCCCCTAATGTTATAG+GGG | - | chr4_4:82147112-82147131 | None:intergenic | 40.0% | |
| GACGATCCCCTAATGTTATA+GGG | - | chr4_4:82147113-82147132 | None:intergenic | 40.0% | |
| AGACGATCCCCTAATGTTAT+AGG | - | chr4_4:82147114-82147133 | None:intergenic | 40.0% | |
| GAAGCTATTGAATGTAGCAC+TGG | + | chr4_4:82147158-82147177 | Msa0708590:CDS | 40.0% | |
| TTGGAGCTTAATTCTGCGAT+TGG | + | chr4_4:82147401-82147420 | Msa0708590:intron | 40.0% | |
| CTTAACAACACGTCAACAAC+AGG | + | chr4_4:82147480-82147499 | Msa0708590:CDS | 40.0% | |
| !!! | AACAGGAGAGTGCTATGTTT+TGG | + | chr4_4:82147497-82147516 | Msa0708590:CDS | 40.0% |
| !!! | ACAGGAGAGTGCTATGTTTT+GGG | + | chr4_4:82147498-82147517 | Msa0708590:CDS | 40.0% |
| !!! | TGCTATGTTTTGGGTTGTTG+AGG | + | chr4_4:82147507-82147526 | Msa0708590:CDS | 40.0% |
| ! | TTGTTGAGGCGAAGAGATTT+TGG | + | chr4_4:82147521-82147540 | Msa0708590:CDS | 40.0% |
| !! | GTGTGTTTTTCAGCTAGTTG+AGG | + | chr4_4:82147642-82147661 | Msa0708590:CDS | 40.0% |
| GGAAAACAAGGAGGATAGCA+TGG | - | chr4_4:82145764-82145783 | None:intergenic | 45.0% | |
| !!! | TATCCTCCTTGTTTTCCCCA+TGG | + | chr4_4:82145767-82145786 | Msa0708590:CDS | 45.0% |
| !!! | ATCCTCCTTGTTTTCCCCAT+GGG | + | chr4_4:82145768-82145787 | Msa0708590:CDS | 45.0% |
| TTTAGGCTCCTCTTGTTGGT+TGG | - | chr4_4:82145851-82145870 | None:intergenic | 45.0% | |
| AGCCTTCTTGCTGAGATATC+TGG | + | chr4_4:82145880-82145899 | Msa0708590:CDS | 45.0% | |
| GTCCAGATATCTCAGCAAGA+AGG | - | chr4_4:82145885-82145904 | None:intergenic | 45.0% | |
| ! | ACGGGCATTGTCATTTGAGA+TGG | - | chr4_4:82145913-82145932 | None:intergenic | 45.0% |
| CAGATTAGGTGTATCTCGTG+TGG | + | chr4_4:82146248-82146267 | Msa0708590:intron | 45.0% | |
| !! | TTTTATCAGCGTGTCGGTGT+CGG | + | chr4_4:82146339-82146358 | Msa0708590:intron | 45.0% |
| CGTTAGTAGGGAGACAAATC+TGG | + | chr4_4:82146372-82146391 | Msa0708590:intron | 45.0% | |
| TCCTCTCTTCAAGTCAAGGA+GGG | - | chr4_4:82146522-82146541 | None:intergenic | 45.0% | |
| TTCCTCTCTTCAAGTCAAGG+AGG | - | chr4_4:82146523-82146542 | None:intergenic | 45.0% | |
| ! | TCCTTGACTTGAAGAGAGGA+AGG | + | chr4_4:82146522-82146541 | Msa0708590:intron | 45.0% |
| TCCTTCCTCTCTTCAAGTCA+AGG | - | chr4_4:82146526-82146545 | None:intergenic | 45.0% | |
| CGTTGGAAGACATCTCTCTT+TGG | - | chr4_4:82146656-82146675 | None:intergenic | 45.0% | |
| CGTCTCACTTGAGACATGTT+TGG | + | chr4_4:82146857-82146876 | Msa0708590:intron | 45.0% | |
| ! | TGAATGTAGCACTGGAGCAT+TGG | + | chr4_4:82147166-82147185 | Msa0708590:CDS | 45.0% |
| ! | CGTGTTGTTAAGAAGTTGCG+CGG | - | chr4_4:82147472-82147491 | None:intergenic | 45.0% |
| GGAAAACAAGGAGGATAGCA+TGG | - | chr4_4:82145764-82145783 | None:intergenic | 45.0% | |
| !!! | TATCCTCCTTGTTTTCCCCA+TGG | + | chr4_4:82145767-82145786 | Msa0708590:CDS | 45.0% |
| !!! | ATCCTCCTTGTTTTCCCCAT+GGG | + | chr4_4:82145768-82145787 | Msa0708590:CDS | 45.0% |
| TTTAGGCTCCTCTTGTTGGT+TGG | - | chr4_4:82145851-82145870 | None:intergenic | 45.0% | |
| AGCCTTCTTGCTGAGATATC+TGG | + | chr4_4:82145880-82145899 | Msa0708590:CDS | 45.0% | |
| GTCCAGATATCTCAGCAAGA+AGG | - | chr4_4:82145885-82145904 | None:intergenic | 45.0% | |
| ! | ACGGGCATTGTCATTTGAGA+TGG | - | chr4_4:82145913-82145932 | None:intergenic | 45.0% |
| CAGATTAGGTGTATCTCGTG+TGG | + | chr4_4:82146248-82146267 | Msa0708590:intron | 45.0% | |
| !! | TTTTATCAGCGTGTCGGTGT+CGG | + | chr4_4:82146339-82146358 | Msa0708590:intron | 45.0% |
| CGTTAGTAGGGAGACAAATC+TGG | + | chr4_4:82146372-82146391 | Msa0708590:intron | 45.0% | |
| TCCTCTCTTCAAGTCAAGGA+GGG | - | chr4_4:82146522-82146541 | None:intergenic | 45.0% | |
| TTCCTCTCTTCAAGTCAAGG+AGG | - | chr4_4:82146523-82146542 | None:intergenic | 45.0% | |
| ! | TCCTTGACTTGAAGAGAGGA+AGG | + | chr4_4:82146522-82146541 | Msa0708590:intron | 45.0% |
| TCCTTCCTCTCTTCAAGTCA+AGG | - | chr4_4:82146526-82146545 | None:intergenic | 45.0% | |
| CGTTGGAAGACATCTCTCTT+TGG | - | chr4_4:82146656-82146675 | None:intergenic | 45.0% | |
| CGTCTCACTTGAGACATGTT+TGG | + | chr4_4:82146857-82146876 | Msa0708590:intron | 45.0% | |
| ! | TGAATGTAGCACTGGAGCAT+TGG | + | chr4_4:82147166-82147185 | Msa0708590:CDS | 45.0% |
| ! | CGTGTTGTTAAGAAGTTGCG+CGG | - | chr4_4:82147472-82147491 | None:intergenic | 45.0% |
| !! | TTATAATATTGAAATATAAT+TGG | + | chr4_4:82147382-82147401 | Msa0708590:intron | 5.0% |
| !! | TTATAATATTGAAATATAAT+TGG | + | chr4_4:82147382-82147401 | Msa0708590:intron | 5.0% |
| TTCCCATGGGGAAAACAAGG+AGG | - | chr4_4:82145773-82145792 | None:intergenic | 50.0% | |
| GGTTTCCCATGGGGAAAACA+AGG | - | chr4_4:82145776-82145795 | None:intergenic | 50.0% | |
| AGCGTTTAGGCTCCTCTTGT+TGG | - | chr4_4:82145855-82145874 | None:intergenic | 50.0% | |
| AGAAGGCTGCGATAGCGTTT+AGG | - | chr4_4:82145868-82145887 | None:intergenic | 50.0% | |
| GGTGTCCATGTCCGTTAGTA+GGG | + | chr4_4:82146360-82146379 | Msa0708590:intron | 50.0% | |
| ! | TGTCTCCCTACTAACGGACA+TGG | - | chr4_4:82146368-82146387 | None:intergenic | 50.0% |
| GAAAGCTTGCAACAGACCAG+AGG | + | chr4_4:82146485-82146504 | Msa0708590:intron | 50.0% | |
| CTCTCTTCAAGTCAAGGAGG+GGG | - | chr4_4:82146520-82146539 | None:intergenic | 50.0% | |
| CCTCTCTTCAAGTCAAGGAG+GGG | - | chr4_4:82146521-82146540 | None:intergenic | 50.0% | |
| GCATGCGGTGTACAACATTG+TGG | - | chr4_4:82146835-82146854 | None:intergenic | 50.0% | |
| CTCAAGTGAGACGTAGCATG+CGG | - | chr4_4:82146850-82146869 | None:intergenic | 50.0% | |
| TTCCCATGGGGAAAACAAGG+AGG | - | chr4_4:82145773-82145792 | None:intergenic | 50.0% | |
| GGTTTCCCATGGGGAAAACA+AGG | - | chr4_4:82145776-82145795 | None:intergenic | 50.0% | |
| AGCGTTTAGGCTCCTCTTGT+TGG | - | chr4_4:82145855-82145874 | None:intergenic | 50.0% | |
| AGAAGGCTGCGATAGCGTTT+AGG | - | chr4_4:82145868-82145887 | None:intergenic | 50.0% | |
| GGTGTCCATGTCCGTTAGTA+GGG | + | chr4_4:82146360-82146379 | Msa0708590:intron | 50.0% | |
| ! | TGTCTCCCTACTAACGGACA+TGG | - | chr4_4:82146368-82146387 | None:intergenic | 50.0% |
| GAAAGCTTGCAACAGACCAG+AGG | + | chr4_4:82146485-82146504 | Msa0708590:intron | 50.0% | |
| CTCTCTTCAAGTCAAGGAGG+GGG | - | chr4_4:82146520-82146539 | None:intergenic | 50.0% | |
| CCTCTCTTCAAGTCAAGGAG+GGG | - | chr4_4:82146521-82146540 | None:intergenic | 50.0% | |
| GCATGCGGTGTACAACATTG+TGG | - | chr4_4:82146835-82146854 | None:intergenic | 50.0% | |
| CTCAAGTGAGACGTAGCATG+CGG | - | chr4_4:82146850-82146869 | None:intergenic | 50.0% | |
| CGGTGTCCATGTCCGTTAGT+AGG | + | chr4_4:82146359-82146378 | Msa0708590:intron | 55.0% | |
| TCAAGTCAAGGAGGGGGATG+CGG | - | chr4_4:82146514-82146533 | None:intergenic | 55.0% | |
| ! | CCCCTCCTTGACTTGAAGAG+AGG | + | chr4_4:82146518-82146537 | Msa0708590:intron | 55.0% |
| GAGCGGCTGCACTAGTGTTT+GGG | + | chr4_4:82146690-82146709 | Msa0708590:intron | 55.0% | |
| !! | TGGAGCATTGGAGAGAGCCA+AGG | + | chr4_4:82147178-82147197 | Msa0708590:CDS | 55.0% |
| CGGTGTCCATGTCCGTTAGT+AGG | + | chr4_4:82146359-82146378 | Msa0708590:intron | 55.0% | |
| TCAAGTCAAGGAGGGGGATG+CGG | - | chr4_4:82146514-82146533 | None:intergenic | 55.0% | |
| ! | CCCCTCCTTGACTTGAAGAG+AGG | + | chr4_4:82146518-82146537 | Msa0708590:intron | 55.0% |
| GAGCGGCTGCACTAGTGTTT+GGG | + | chr4_4:82146690-82146709 | Msa0708590:intron | 55.0% | |
| !! | TGGAGCATTGGAGAGAGCCA+AGG | + | chr4_4:82147178-82147197 | Msa0708590:CDS | 55.0% |
| CGAGCGGCTGCACTAGTGTT+TGG | + | chr4_4:82146689-82146708 | Msa0708590:intron | 60.0% | |
| GTTGTGACTGCGGCAAGCCT+TGG | - | chr4_4:82147198-82147217 | None:intergenic | 60.0% | |
| CGAGCGGCTGCACTAGTGTT+TGG | + | chr4_4:82146689-82146708 | Msa0708590:intron | 60.0% | |
| GTTGTGACTGCGGCAAGCCT+TGG | - | chr4_4:82147198-82147217 | None:intergenic | 60.0% | |
| GAGGGGGATGCGGAGTCCTC+TGG | - | chr4_4:82146504-82146523 | None:intergenic | 70.0% | |
| GAGGGGGATGCGGAGTCCTC+TGG | - | chr4_4:82146504-82146523 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 82145421 | 82147714 | 82145421 | ID=Msa0708590;Name=Msa0708590 |
| chr4_4 | mRNA | 82145421 | 82147714 | 82145421 | ID=Msa0708590-mRNA-1;Parent=Msa0708590;Name=Msa0708590-mRNA-1;_AED=0.04;_eAED=0.12;_QI=0|0|0|1|1|1|3|0|326 |
| chr4_4 | exon | 82145421 | 82145973 | 82145421 | ID=Msa0708590-mRNA-1:exon:27029;Parent=Msa0708590-mRNA-1 |
| chr4_4 | exon | 82147093 | 82147268 | 82147093 | ID=Msa0708590-mRNA-1:exon:27030;Parent=Msa0708590-mRNA-1 |
| chr4_4 | exon | 82147463 | 82147714 | 82147463 | ID=Msa0708590-mRNA-1:exon:27031;Parent=Msa0708590-mRNA-1 |
| chr4_4 | CDS | 82145421 | 82145973 | 82145421 | ID=Msa0708590-mRNA-1:cds;Parent=Msa0708590-mRNA-1 |
| chr4_4 | CDS | 82147093 | 82147268 | 82147093 | ID=Msa0708590-mRNA-1:cds;Parent=Msa0708590-mRNA-1 |
| chr4_4 | CDS | 82147463 | 82147714 | 82147463 | ID=Msa0708590-mRNA-1:cds;Parent=Msa0708590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
