AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0713280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0713280 MtrunA17_Chr5g0399911 81.443 194 6 2 1 164 1 194 3.44e-105 308
Msa0713280 MtrunA17_Chr5g0399911 90.323 93 9 0 163 255 261 353 9.81e-53 174
Msa0713280 MtrunA17_Chr4g0055451 78.771 179 21 1 3 164 2 180 2.23e-98 291
Msa0713280 MtrunA17_Chr4g0055451 50.526 95 38 4 163 252 247 337 2.43e-18 82.8
Msa0713280 MtrunA17_Chr8g0381821 75.281 178 27 1 4 164 2 179 3.96e-95 282
Msa0713280 MtrunA17_Chr2g0277501 76.404 178 25 1 4 164 2 179 4.40e-95 283
Msa0713280 MtrunA17_Chr4g0045371 73.333 180 31 1 2 164 19 198 5.35e-94 280
Msa0713280 MtrunA17_Chr8g0385281 75.843 178 26 1 4 164 3 180 7.42e-94 280
Msa0713280 MtrunA17_Chr1g0162301 72.778 180 32 1 2 164 20 199 1.33e-93 280
Msa0713280 MtrunA17_Chr3g0131061 75.843 178 26 1 4 164 2 179 5.74e-93 278
Msa0713280 MtrunA17_Chr8g0374571 70.556 180 36 1 2 164 19 198 1.82e-91 274
Msa0713280 MtrunA17_Chr5g0426521 71.910 178 33 1 4 164 2 179 1.14e-89 268
Msa0713280 MtrunA17_Chr5g0402661 69.444 180 38 1 2 164 14 193 4.38e-89 268
Msa0713280 MtrunA17_Chr3g0123791 70.950 179 35 1 3 164 2 180 1.28e-88 266
Msa0713280 MtrunA17_Chr8g0380661 58.989 178 53 2 4 164 2 176 4.37e-74 228
Msa0713280 MtrunA17_Chr4g0055431 62.162 185 47 2 3 164 2 186 2.50e-73 226
Msa0713280 MtrunA17_Chr4g0055431 56.338 71 28 3 163 232 253 321 7.41e-17 78.6
Msa0713280 MtrunA17_Chr2g0302431 40.625 192 80 6 5 168 19 204 4.06e-37 135
Msa0713280 MtrunA17_Chr2g0304111 39.037 187 80 5 5 163 22 202 6.89e-34 127
Msa0713280 MtrunA17_Chr5g0441011 39.785 186 78 6 6 163 13 192 1.25e-33 126
Msa0713280 MtrunA17_Chr5g0428031 40.000 185 79 6 5 163 8 186 1.83e-32 123
Msa0713280 MtrunA17_Chr8g0346081 40.884 181 83 5 5 163 16 194 3.61e-32 122
Msa0713280 MtrunA17_Chr8g0379091 42.188 192 76 7 5 168 25 209 5.67e-32 122
Msa0713280 MtrunA17_Chr8g0346071 40.331 181 84 5 5 163 16 194 8.32e-32 121
Msa0713280 MtrunA17_Chr5g0432491 39.583 192 82 6 5 168 22 207 1.43e-31 120
Msa0713280 MtrunA17_Chr4g0063881 40.000 185 79 6 5 163 10 188 1.66e-31 120
Msa0713280 MtrunA17_Chr7g0244521 41.270 189 84 7 4 168 10 195 7.15e-30 116
Msa0713280 MtrunA17_Chr3g0107011 40.104 192 82 8 4 168 12 197 1.69e-29 115
Msa0713280 MtrunA17_Chr4g0013131 37.824 193 85 7 4 168 10 195 3.00e-29 114
Msa0713280 MtrunA17_Chr3g0107051 38.542 192 83 7 5 168 20 204 3.18e-29 114
Msa0713280 MtrunA17_Chr2g0284011 38.220 191 87 7 4 168 10 195 3.74e-29 114
Msa0713280 MtrunA17_Chr2g0284031 40.104 192 80 7 5 168 30 214 4.31e-29 114
Msa0713280 MtrunA17_Chr6g0453681 41.304 184 85 4 6 168 19 200 4.48e-29 114
Msa0713280 MtrunA17_Chr6g0468751 41.304 184 85 4 6 168 19 200 6.53e-29 114
Msa0713280 MtrunA17_Chr4g0069301 39.037 187 80 6 5 163 25 205 8.71e-29 113
Msa0713280 MtrunA17_Chr5g0432471 38.342 193 84 7 4 168 10 195 1.82e-28 112
Msa0713280 MtrunA17_Chr6g0453671 40.541 185 85 6 6 168 19 200 8.34e-28 109
Msa0713280 MtrunA17_Chr1g0150321 39.572 187 78 7 5 163 12 191 1.02e-27 110
Msa0713280 MtrunA17_Chr3g0114511 33.051 236 119 8 5 204 31 263 1.54e-27 109
Msa0713280 MtrunA17_Chr4g0074111 36.979 192 86 8 5 168 17 201 1.84e-26 106
Msa0713280 MtrunA17_Chr4g0001331 37.766 188 84 7 5 165 19 200 2.99e-26 106
Msa0713280 MtrunA17_Chr4g0033371 36.087 230 114 9 4 202 70 297 5.04e-26 106
Msa0713280 MtrunA17_Chr1g0205421 32.042 284 148 11 5 249 11 288 7.98e-26 105
Msa0713280 MtrunA17_Chr1g0166101 35.450 189 88 6 5 165 23 205 1.09e-24 101
Msa0713280 MtrunA17_Chr8g0345801 35.057 174 92 3 12 164 21 194 6.40e-24 97.1
Msa0713280 MtrunA17_Chr1g0173541 37.079 178 89 6 4 158 50 227 6.60e-24 100
Msa0713280 MtrunA17_Chr3g0132671 34.579 214 87 5 6 168 19 230 3.84e-23 97.8
Msa0713280 MtrunA17_Chr3g0091281 36.413 184 83 7 5 161 11 187 1.23e-22 92.8
Msa0713280 MtrunA17_Chr1g0188031 35.079 191 88 8 5 165 19 203 1.33e-22 95.9
Msa0713280 MtrunA17_Chr2g0333821 37.173 191 87 7 5 168 13 197 2.39e-22 95.1
Msa0713280 MtrunA17_Chr3g0091311 33.175 211 95 8 5 177 11 213 9.18e-22 90.9
Msa0713280 MtrunA17_Chr8g0351491 34.270 178 92 4 6 162 16 189 9.26e-22 91.3
Msa0713280 MtrunA17_Chr8g0353621 33.146 178 94 4 6 162 10 183 2.21e-21 90.1
Msa0713280 MtrunA17_Chr3g0098951 33.054 239 126 8 6 212 84 320 2.43e-21 92.8
Msa0713280 MtrunA17_Chr7g0257751 36.872 179 90 6 3 158 55 233 3.14e-21 92.4
Msa0713280 MtrunA17_Chr5g0441691 33.471 242 121 10 6 212 68 304 3.65e-21 92.0
Msa0713280 MtrunA17_Chr5g0444171 33.913 230 117 9 6 203 92 318 4.53e-21 92.0
Msa0713280 MtrunA17_Chr1g0170281 32.500 240 132 8 3 212 115 354 5.18e-21 92.0
Msa0713280 MtrunA17_Chr1g0200601 36.066 183 84 8 4 158 28 205 7.27e-21 91.3
Msa0713280 MtrunA17_Chr3g0091421 34.783 184 86 7 5 161 11 187 8.26e-21 88.2
Msa0713280 MtrunA17_Chr4g0008561 33.333 180 99 3 6 164 19 198 1.20e-20 90.9
Msa0713280 MtrunA17_Chr1g0157131 33.624 229 119 8 6 203 74 300 2.13e-20 90.1
Msa0713280 MtrunA17_Chr1g0203881 32.258 217 118 6 3 190 38 254 2.18e-20 89.7
Msa0713280 MtrunA17_Chr1g0170551 32.222 180 98 5 4 162 5 181 2.53e-20 90.1
Msa0713280 MtrunA17_Chr5g0428981 31.401 207 84 5 4 156 761 963 3.71e-20 89.7
Msa0713280 MtrunA17_Chr4g0018201 31.401 207 84 5 4 156 757 959 4.20e-20 89.4
Msa0713280 MtrunA17_Chr0c02g0489761 33.755 237 120 8 1 203 71 304 4.26e-20 89.0
Msa0713280 MtrunA17_Chr5g0419441 33.696 184 93 7 5 164 238 416 8.84e-20 88.6
Msa0713280 MtrunA17_Chr4g0059951 34.831 178 93 6 4 158 71 248 1.03e-19 88.2
Msa0713280 MtrunA17_Chr4g0074811 33.745 243 119 11 6 212 91 327 6.02e-19 85.9
Msa0713280 MtrunA17_Chr8g0385341 36.517 178 90 6 4 158 28 205 6.68e-19 85.5
Msa0713280 MtrunA17_Chr7g0242561 32.340 235 120 10 3 203 53 282 6.85e-19 85.5
Msa0713280 MtrunA17_Chr6g0478601 29.327 208 88 5 4 156 109 312 7.91e-19 85.5
Msa0713280 MtrunA17_Chr7g0244561 31.414 191 100 5 5 168 15 201 2.06e-18 84.0
Msa0713280 MtrunA17_Chr7g0267771 35.593 177 91 5 3 156 85 261 2.14e-18 84.0
Msa0713280 MtrunA17_Chr5g0448721 32.743 226 121 7 6 202 96 319 3.62e-18 83.6
Msa0713280 MtrunA17_Chr5g0402551 34.254 181 92 6 5 158 133 313 6.06e-18 82.8
Msa0713280 MtrunA17_Chr1g0176421 31.513 238 131 8 6 212 161 397 7.04e-18 82.8
Msa0713280 MtrunA17_Chr8g0387671 31.373 255 127 9 10 223 70 317 8.36e-18 82.4
Msa0713280 MtrunA17_Chr2g0286501 31.844 179 87 5 5 156 48 218 2.51e-17 81.3
Msa0713280 MtrunA17_Chr3g0140631 28.492 179 103 4 6 163 37 211 3.13e-17 79.3
Msa0713280 MtrunA17_Chr5g0397101 31.461 267 131 11 1 223 60 318 4.68e-17 80.1
Msa0713280 MtrunA17_Chr5g0409421 37.714 175 81 9 4 156 2 170 5.08e-17 80.1
Msa0713280 MtrunA17_Chr3g0129721 32.597 181 100 4 6 164 24 204 1.04e-16 77.8
Msa0713280 MtrunA17_Chr7g0267751 31.441 229 128 6 4 203 133 361 1.81e-16 78.6
Msa0713280 MtrunA17_Chr5g0405421 31.319 182 100 6 3 159 96 277 2.11e-16 78.2
Msa0713280 MtrunA17_Chr1g0176751 30.453 243 133 8 3 212 121 360 2.51e-16 78.2
Msa0713280 MtrunA17_Chr3g0131181 33.146 178 96 5 4 158 27 204 2.77e-16 77.8
Msa0713280 MtrunA17_Chr7g0245031 29.121 182 102 4 4 162 146 323 2.78e-16 77.8
Msa0713280 MtrunA17_Chr1g0197721 32.258 186 92 5 4 157 49 232 3.19e-16 77.8
Msa0713280 MtrunA17_Chr8g0369451 35.429 175 85 9 4 156 2 170 5.02e-16 77.0
Msa0713280 MtrunA17_Chr3g0091291 36.364 132 54 6 48 156 6 130 5.07e-16 74.7
Msa0713280 MtrunA17_Chr3g0127571 35.165 182 89 8 5 158 137 317 8.85e-16 76.6
Msa0713280 MtrunA17_Chr1g0171451 31.944 216 107 12 8 188 415 625 1.19e-15 76.3
Msa0713280 MtrunA17_Chr4g0045261 34.254 181 92 7 5 158 136 316 1.95e-15 75.5
Msa0713280 MtrunA17_Chr1g0179331 32.569 218 103 12 8 188 556 766 5.79e-15 74.3
Msa0713280 MtrunA17_Chr5g0444181 35.762 151 72 6 6 132 91 240 6.51e-15 72.4
Msa0713280 MtrunA17_Chr2g0317001 33.708 178 92 5 5 160 14 187 2.82e-14 72.0
Msa0713280 MtrunA17_Chr1g0191171 33.333 171 82 8 12 156 695 859 7.37e-14 70.9
Msa0713280 MtrunA17_Chr1g0202831 28.571 175 100 3 5 156 410 582 1.03e-13 70.5
Msa0713280 MtrunA17_Chr8g0388891 28.571 182 100 4 12 167 139 316 2.96e-13 68.6
Msa0713280 MtrunA17_Chr3g0090261 28.492 179 98 4 12 164 88 262 6.39e-13 67.8
Msa0713280 MtrunA17_Chr1g0190131 28.571 182 105 4 5 164 8 186 6.95e-13 67.0
Msa0713280 MtrunA17_Chr1g0202101 29.299 157 88 4 29 164 304 458 6.99e-13 67.8
Msa0713280 MtrunA17_Chr8g0339221 34.286 175 87 7 4 156 2 170 7.27e-13 67.8
Msa0713280 MtrunA17_Chr4g0025671 27.624 181 106 4 4 161 6 184 8.28e-13 67.8
Msa0713280 MtrunA17_Chr7g0260191 26.087 184 111 4 4 164 2 183 1.03e-12 67.4
Msa0713280 MtrunA17_Chr5g0427651 32.948 173 82 8 12 156 652 818 1.47e-12 67.0
Msa0713280 MtrunA17_Chr2g0277011 31.250 176 81 9 12 156 96 262 1.59e-12 66.6
Msa0713280 MtrunA17_Chr8g0355131 35.664 143 69 4 47 171 94 231 2.34e-12 66.2
Msa0713280 MtrunA17_Chr1g0185221 26.630 184 110 4 4 164 2 183 2.86e-12 66.2
Msa0713280 MtrunA17_Chr2g0321841 27.624 181 106 4 4 161 2 180 4.52e-12 65.9
Msa0713280 MtrunA17_Chr1g0151541 28.774 212 108 9 12 188 669 872 4.75e-12 65.5
Msa0713280 MtrunA17_Chr1g0190831 26.630 184 110 4 4 164 2 183 5.38e-12 65.5
Msa0713280 MtrunA17_Chr4g0042731 30.387 181 96 4 12 164 149 327 5.48e-12 65.1
Msa0713280 MtrunA17_Chr7g0272841 28.161 174 94 4 12 156 74 245 1.79e-11 63.9
Msa0713280 MtrunA17_Chr6g0482711 35.200 125 54 5 55 156 710 830 2.06e-11 63.9
Msa0713280 MtrunA17_Chr3g0132591 25.628 199 123 5 3 182 109 301 3.52e-11 62.8
Msa0713280 MtrunA17_Chr4g0051261 31.073 177 95 7 4 156 2 175 9.26e-11 60.8
Msa0713280 MtrunA17_Chr7g0258051 27.072 181 107 4 4 161 14 192 9.96e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0713280 AT4G33950.2 72.222 180 33 1 2 164 17 196 2.92e-93 278
Msa0713280 AT1G10940.1 75.281 178 27 1 4 164 2 179 2.97e-93 279
Msa0713280 AT4G33950.1 72.222 180 33 1 2 164 17 196 5.42e-93 278
Msa0713280 AT5G66880.1 72.778 180 32 1 2 164 18 197 7.85e-93 278
Msa0713280 AT5G66880.2 72.778 180 32 1 2 164 18 197 7.85e-93 278
Msa0713280 AT3G50500.1 72.222 180 33 1 2 164 19 198 4.67e-92 276
Msa0713280 AT1G10940.2 72.043 186 27 1 4 164 2 187 8.91e-92 275
Msa0713280 AT5G08590.1 71.429 182 35 1 4 168 2 183 4.60e-91 273
Msa0713280 AT5G08590.1 50.000 56 26 1 163 218 246 299 3.56e-11 62.8
Msa0713280 AT5G63650.1 72.527 182 33 1 4 168 2 183 5.53e-91 273
Msa0713280 AT5G63650.1 43.750 64 35 1 163 226 246 308 3.85e-11 62.8
Msa0713280 AT1G60940.1 73.596 178 30 1 4 164 2 179 1.21e-90 272
Msa0713280 AT1G60940.2 73.596 178 30 1 4 164 2 179 1.21e-90 272
Msa0713280 AT4G40010.1 72.472 178 32 1 4 164 2 179 3.65e-90 271
Msa0713280 AT3G50500.2 69.519 187 33 2 2 164 19 205 2.60e-89 269
Msa0713280 AT2G23030.1 68.681 182 40 1 4 168 2 183 6.63e-89 267
Msa0713280 AT1G78290.3 72.472 178 32 1 4 164 2 179 5.62e-88 265
Msa0713280 AT1G78290.2 72.472 178 32 1 4 164 2 179 5.62e-88 265
Msa0713280 AT5G08590.2 68.224 107 17 1 79 168 1 107 1.08e-44 152
Msa0713280 AT5G08590.2 50.000 56 26 1 163 218 170 223 2.44e-11 62.8
Msa0713280 AT2G26980.2 39.572 187 79 6 5 163 13 193 2.45e-35 127
Msa0713280 AT3G17510.1 40.838 191 79 6 1 163 15 199 7.26e-35 130
Msa0713280 AT2G26980.1 39.572 187 79 6 5 163 13 193 9.11e-35 128
Msa0713280 AT2G26980.3 39.572 187 79 6 5 163 13 193 1.29e-34 129
Msa0713280 AT2G26980.4 39.572 187 79 6 5 163 23 203 1.51e-34 129
Msa0713280 AT2G26980.5 39.572 187 79 6 5 163 13 193 2.50e-34 128
Msa0713280 AT1G30270.1 39.683 189 80 6 5 165 30 212 8.78e-34 127
Msa0713280 AT1G30270.2 39.683 189 80 6 5 165 30 212 1.12e-33 127
Msa0713280 AT1G48260.1 41.885 191 77 6 1 163 6 190 1.43e-33 126
Msa0713280 AT5G01810.3 43.850 187 70 7 5 163 11 190 4.64e-33 124
Msa0713280 AT5G01810.1 43.850 187 70 7 5 163 11 190 6.96e-33 124
Msa0713280 AT5G01810.2 43.850 187 70 7 5 163 11 190 6.96e-33 124
Msa0713280 AT1G01140.3 35.565 239 89 7 6 185 19 251 2.16e-32 123
Msa0713280 AT1G01140.1 35.565 239 89 7 6 185 19 251 2.26e-32 123
Msa0713280 AT1G01140.2 40.860 186 76 6 6 163 19 198 2.48e-32 123
Msa0713280 AT5G21326.1 40.107 187 78 6 5 163 12 192 2.92e-32 122
Msa0713280 AT4G24400.2 40.761 184 79 6 5 163 8 186 5.06e-32 122
Msa0713280 AT5G35410.2 40.000 185 79 6 5 163 10 188 1.02e-31 120
Msa0713280 AT4G24400.1 40.761 184 79 6 5 163 8 186 1.07e-31 121
Msa0713280 AT5G35410.1 40.000 185 79 6 5 163 10 188 2.93e-31 120
Msa0713280 AT4G11373.1 66.279 86 25 1 34 115 1 86 6.57e-31 111
Msa0713280 AT4G14580.1 38.947 190 81 6 5 165 20 203 2.40e-30 117
Msa0713280 AT2G30360.1 36.788 193 87 6 5 168 20 206 3.04e-30 117
Msa0713280 AT5G25110.1 40.212 189 78 7 5 165 42 223 3.68e-30 117
Msa0713280 AT3G01090.3 41.304 184 85 4 6 168 19 200 4.50e-30 117
Msa0713280 AT3G01090.1 41.304 184 85 4 6 168 19 200 4.50e-30 117
Msa0713280 AT3G23000.1 38.624 189 82 6 5 165 24 206 6.14e-30 116
Msa0713280 AT3G01090.2 41.304 184 85 4 6 168 42 223 6.40e-30 117
Msa0713280 AT5G45810.1 39.062 192 82 7 5 168 27 211 9.68e-30 116
Msa0713280 AT5G10930.1 40.394 203 79 8 1 168 1 196 1.77e-29 115
Msa0713280 AT4G18700.1 40.104 192 80 7 5 168 25 209 3.69e-29 115
Msa0713280 AT3G29160.3 40.217 184 87 4 6 168 20 201 1.23e-28 112
Msa0713280 AT2G34180.1 40.741 189 85 6 4 168 55 240 2.51e-28 112
Msa0713280 AT2G25090.1 36.816 201 85 6 4 168 13 207 3.55e-28 112
Msa0713280 AT5G39440.1 42.938 177 78 4 6 161 19 193 3.82e-28 112
Msa0713280 AT3G29160.1 40.217 184 87 4 6 168 20 201 5.19e-28 112
Msa0713280 AT3G29160.2 40.217 184 87 4 6 168 20 201 5.19e-28 112
Msa0713280 AT5G45820.1 36.979 192 86 7 5 168 11 195 7.59e-28 110
Msa0713280 AT5G58380.1 37.306 193 86 8 4 168 10 195 1.17e-27 110
Msa0713280 AT5G57630.2 35.326 184 97 5 5 168 11 192 7.76e-27 107
Msa0713280 AT5G57630.1 35.326 184 97 5 5 168 11 192 8.39e-27 107
Msa0713280 AT1G29230.1 38.021 192 84 7 5 168 73 257 1.71e-26 107
Msa0713280 AT5G21222.1 35.135 185 94 5 5 165 12 194 3.99e-26 107
Msa0713280 AT5G21222.2 35.135 185 94 5 5 165 12 194 3.99e-26 107
Msa0713280 AT5G21222.4 35.135 185 94 5 5 165 12 194 3.99e-26 107
Msa0713280 AT5G21222.3 35.135 185 94 5 5 165 12 194 3.99e-26 107
Msa0713280 AT2G45490.2 36.517 178 88 4 6 162 22 195 2.39e-25 100
Msa0713280 AT5G01820.1 38.542 192 83 7 5 168 21 205 2.90e-25 103
Msa0713280 AT5G07070.1 36.269 193 88 7 4 168 10 195 3.52e-25 103
Msa0713280 AT2G45490.1 36.517 178 88 4 6 162 22 195 4.64e-25 100
Msa0713280 AT3G61960.1 35.450 189 97 4 1 164 1 189 6.38e-25 103
Msa0713280 AT2G38490.1 38.542 192 83 8 5 168 27 211 6.61e-25 102
Msa0713280 AT3G61960.2 35.450 189 97 4 1 164 1 189 7.08e-25 103
Msa0713280 AT4G30960.1 35.979 189 86 7 5 165 23 204 1.62e-23 99.0
Msa0713280 AT2G17290.1 33.755 237 127 7 6 212 85 321 1.13e-22 97.1
Msa0713280 AT2G17290.2 33.755 237 127 7 6 212 85 321 1.13e-22 97.1
Msa0713280 AT2G31500.1 34.934 229 116 9 5 202 65 291 2.34e-22 96.3
Msa0713280 AT1G50700.3 34.167 240 122 8 6 212 73 309 2.80e-22 95.5
Msa0713280 AT1G50700.1 34.167 240 122 8 6 212 73 309 2.96e-22 95.9
Msa0713280 AT1G50700.2 34.167 240 122 8 6 212 73 309 3.46e-22 95.5
Msa0713280 AT5G12480.1 36.667 180 90 7 5 161 58 236 4.05e-22 95.5
Msa0713280 AT1G12580.1 31.336 217 120 5 3 190 41 257 5.87e-22 94.7
Msa0713280 AT2G41860.2 32.900 231 122 9 3 202 51 279 1.39e-21 94.0
Msa0713280 AT2G41860.1 32.900 231 122 9 3 202 51 279 1.61e-21 93.6
Msa0713280 AT3G53930.1 34.066 182 95 4 6 164 20 199 1.91e-21 93.6
Msa0713280 AT3G53930.2 34.066 182 95 4 6 164 20 199 1.95e-21 93.6
Msa0713280 AT1G35670.1 37.989 179 86 6 4 158 24 201 2.23e-21 93.2
Msa0713280 AT5G19450.2 37.430 179 88 7 6 161 57 234 2.61e-21 93.2
Msa0713280 AT5G19450.1 37.430 179 88 7 6 161 57 234 2.61e-21 93.2
Msa0713280 AT1G76040.2 32.231 242 124 9 6 212 112 348 4.37e-21 92.4
Msa0713280 AT1G76040.3 32.231 242 124 9 6 212 112 348 4.84e-21 92.0
Msa0713280 AT5G12180.1 34.348 230 116 8 6 203 73 299 5.10e-21 92.0
Msa0713280 AT5G62310.1 33.173 208 80 6 4 156 752 955 5.69e-21 92.4
Msa0713280 AT3G20410.2 32.500 240 126 9 6 212 91 327 6.45e-21 92.0
Msa0713280 AT3G20410.1 32.500 240 126 9 6 212 91 327 6.45e-21 92.0
Msa0713280 AT4G09570.1 37.079 178 89 5 4 158 23 200 6.81e-21 91.7
Msa0713280 AT3G57530.1 36.111 180 90 7 3 158 60 238 9.39e-21 91.3
Msa0713280 AT2G38910.1 32.653 245 119 11 6 212 134 370 1.10e-20 91.3
Msa0713280 AT3G57530.2 36.111 180 90 7 3 158 60 238 1.21e-20 90.5
Msa0713280 AT5G04870.1 32.500 240 132 8 3 212 147 386 2.91e-20 90.1
Msa0713280 AT2G37840.1 33.333 180 99 3 6 164 12 191 6.02e-20 89.4
Msa0713280 AT4G38230.4 32.301 226 124 6 6 202 24 249 1.00e-19 88.2
Msa0713280 AT4G38230.3 32.301 226 124 6 6 202 24 249 1.00e-19 88.2
Msa0713280 AT4G38230.2 32.301 226 124 6 6 202 54 279 1.07e-19 88.2
Msa0713280 AT4G35310.2 32.068 237 131 7 6 212 97 333 1.43e-19 88.2
Msa0713280 AT4G35310.1 32.068 237 131 7 6 212 97 333 1.43e-19 88.2
Msa0713280 AT5G19360.1 36.813 182 85 6 6 161 68 245 1.88e-19 87.8
Msa0713280 AT1G50240.3 32.240 183 100 5 1 162 1 180 2.56e-19 87.8
Msa0713280 AT1G50240.2 32.240 183 100 5 1 162 1 180 2.56e-19 87.8
Msa0713280 AT1G18890.1 30.303 231 126 8 4 202 61 288 2.79e-19 87.0
Msa0713280 AT1G12680.1 31.609 174 94 5 3 157 104 271 4.49e-19 86.3
Msa0713280 AT1G74740.1 33.708 178 95 6 4 158 57 234 4.50e-19 86.7
Msa0713280 AT4G04720.2 33.473 239 125 9 6 212 80 316 4.52e-19 86.7
Msa0713280 AT4G04720.1 33.473 239 125 9 6 212 80 316 4.52e-19 86.7
Msa0713280 AT2G17890.1 36.216 185 87 7 3 159 105 286 6.01e-19 86.3
Msa0713280 AT3G17850.1 30.583 206 84 5 6 156 882 1083 6.15e-19 86.7
Msa0713280 AT5G23580.1 29.796 245 142 7 3 217 19 263 7.28e-19 85.9
Msa0713280 AT1G69220.1 32.979 188 89 7 5 164 248 426 9.09e-19 85.9
Msa0713280 AT3G04530.1 34.759 187 94 7 3 164 8 191 1.07e-18 83.6
Msa0713280 AT4G32830.1 29.609 179 101 4 6 163 31 205 1.60e-18 83.2
Msa0713280 AT1G30270.3 42.500 120 39 5 70 165 2 115 1.61e-18 84.3
Msa0713280 AT3G10660.2 31.667 240 134 8 3 212 183 422 1.94e-18 84.7
Msa0713280 AT3G10660.1 31.667 240 134 8 3 212 183 422 1.94e-18 84.7
Msa0713280 AT3G17510.2 42.149 121 40 5 67 163 5 119 3.81e-18 83.2
Msa0713280 AT2G25880.1 29.050 179 102 4 6 163 25 199 4.04e-18 82.0
Msa0713280 AT5G04510.3 34.946 186 83 6 6 157 44 225 4.07e-18 82.4
Msa0713280 AT2G25880.4 29.050 179 102 4 6 163 38 212 5.29e-18 82.0
Msa0713280 AT4G36070.1 33.516 182 96 6 3 159 68 249 7.02e-18 83.2
Msa0713280 AT5G04510.1 34.946 186 83 6 6 157 44 225 8.10e-18 82.8
Msa0713280 AT4G23650.1 32.911 237 122 9 1 203 71 304 8.28e-18 82.8
Msa0713280 AT4G36070.2 33.516 182 96 6 3 159 68 249 8.74e-18 82.8
Msa0713280 AT5G04510.2 34.946 186 83 6 6 157 44 225 9.25e-18 82.4
Msa0713280 AT2G25880.3 29.050 179 102 4 6 163 86 260 1.26e-17 81.6
Msa0713280 AT1G61950.1 30.864 243 133 9 3 212 95 335 1.36e-17 82.4
Msa0713280 AT3G08730.1 30.000 180 99 4 6 162 134 309 1.56e-17 82.0
Msa0713280 AT3G08730.2 30.000 180 99 4 6 162 134 309 1.56e-17 82.0
Msa0713280 AT1G48490.4 30.500 200 86 6 6 156 829 1024 1.86e-17 82.0
Msa0713280 AT1G48490.3 30.500 200 86 6 6 156 828 1023 1.88e-17 82.0
Msa0713280 AT1G48490.2 30.500 200 86 6 6 156 828 1023 1.88e-17 82.0
Msa0713280 AT1G48490.1 30.500 200 86 6 6 156 828 1023 1.88e-17 82.0
Msa0713280 AT3G08720.1 30.769 182 99 4 4 162 138 315 2.86e-17 81.3
Msa0713280 AT3G08720.3 30.769 182 99 4 4 162 138 315 2.86e-17 81.3
Msa0713280 AT3G08720.4 30.769 182 99 4 4 162 138 315 2.86e-17 81.3
Msa0713280 AT3G08720.2 30.769 182 99 4 4 162 138 315 2.86e-17 81.3
Msa0713280 AT2G35890.2 35.912 181 89 7 3 158 129 307 3.02e-17 81.3
Msa0713280 AT2G35890.1 35.912 181 89 7 3 158 129 307 3.02e-17 81.3
Msa0713280 AT3G51850.2 34.066 182 91 7 3 158 51 229 3.93e-17 80.9
Msa0713280 AT3G51850.3 34.066 182 91 7 3 158 51 229 4.82e-17 80.1
Msa0713280 AT3G51850.1 34.066 182 91 7 3 158 51 229 5.08e-17 80.5
Msa0713280 AT3G10540.1 33.871 186 85 6 6 157 45 226 1.29e-16 79.3
Msa0713280 AT4G21940.1 34.061 229 114 10 6 202 102 325 1.31e-16 79.3
Msa0713280 AT4G21940.2 34.061 229 114 10 6 202 102 325 1.60e-16 79.0
Msa0713280 AT4G21940.3 34.061 229 114 10 6 202 102 325 1.61e-16 79.0
Msa0713280 AT1G49180.2 36.145 166 81 5 22 164 23 186 1.83e-16 78.6
Msa0713280 AT1G48260.2 45.946 111 30 5 77 163 1 105 1.94e-16 78.2
Msa0713280 AT1G48260.4 45.946 111 30 5 77 163 1 105 1.94e-16 78.2
Msa0713280 AT1G48260.3 45.946 111 30 5 77 163 1 105 1.94e-16 78.2
Msa0713280 AT1G48260.5 45.946 111 30 5 77 163 1 105 1.94e-16 78.2
Msa0713280 AT1G49180.1 36.145 166 81 5 22 164 23 186 2.21e-16 78.2
Msa0713280 AT1G45160.1 29.000 200 91 5 6 156 670 867 2.25e-16 79.0
Msa0713280 AT1G45160.2 29.000 200 91 5 6 156 670 867 2.80e-16 78.6
Msa0713280 AT3G19100.1 35.870 184 89 8 3 158 141 323 3.33e-16 78.2
Msa0713280 AT1G08650.2 28.378 222 120 8 5 192 14 230 3.42e-16 76.6
Msa0713280 AT1G08650.1 28.378 222 120 8 5 192 14 230 5.17e-16 76.3
Msa0713280 AT5G18700.1 31.765 170 93 4 5 155 3 168 1.63e-15 76.3
Msa0713280 AT2G41140.1 34.426 183 87 7 6 158 123 302 1.80e-15 75.9
Msa0713280 AT5G03730.2 32.569 218 102 11 8 188 553 762 2.23e-15 75.9
Msa0713280 AT5G03730.1 32.569 218 102 11 8 188 553 762 2.23e-15 75.9
Msa0713280 AT5G66210.3 32.967 182 95 7 4 159 60 240 2.56e-15 75.5
Msa0713280 AT5G66210.5 32.967 182 95 7 4 159 60 240 3.47e-15 75.1
Msa0713280 AT1G63700.1 29.143 175 99 3 5 156 399 571 3.62e-15 75.5
Msa0713280 AT1G63700.2 29.143 175 99 3 5 156 399 571 3.62e-15 75.5
Msa0713280 AT5G66210.6 32.967 182 95 7 4 159 60 240 3.90e-15 74.7
Msa0713280 AT5G66210.4 32.967 182 95 7 4 159 60 240 3.90e-15 74.7
Msa0713280 AT4G19110.2 34.857 175 86 9 4 156 2 170 4.17e-15 74.7
Msa0713280 AT4G19110.1 34.857 175 86 9 4 156 2 170 4.56e-15 74.7
Msa0713280 AT5G66210.1 32.967 182 95 7 4 159 60 240 4.86e-15 74.7
Msa0713280 AT5G66210.2 32.967 182 95 7 4 159 60 240 4.86e-15 74.7
Msa0713280 AT5G24430.1 32.240 183 97 6 3 158 140 322 5.26e-15 74.7
Msa0713280 AT1G69220.2 32.022 178 84 7 15 164 231 399 6.11e-15 74.7
Msa0713280 AT2G25880.2 27.778 162 94 3 6 163 25 167 7.71e-15 72.4
Msa0713280 AT4G04740.2 35.838 173 86 7 19 168 82 252 1.35e-14 73.6
Msa0713280 AT3G63280.2 27.717 184 108 4 4 164 2 183 1.73e-14 73.2
Msa0713280 AT3G63280.3 27.717 184 108 4 4 164 2 183 1.73e-14 73.2
Msa0713280 AT3G63280.1 27.717 184 108 4 4 164 2 183 1.73e-14 73.2
Msa0713280 AT4G04740.4 35.838 173 86 7 19 168 82 252 1.79e-14 73.2
Msa0713280 AT4G04740.6 35.838 173 86 7 19 168 82 252 1.79e-14 73.2
Msa0713280 AT4G04740.5 35.838 173 86 7 19 168 82 252 1.79e-14 73.2
Msa0713280 AT4G04740.3 35.838 173 86 7 19 168 82 252 1.79e-14 73.2
Msa0713280 AT4G04740.1 35.838 173 86 7 19 168 82 252 1.79e-14 73.2
Msa0713280 AT4G04740.7 35.838 173 86 7 19 168 82 252 1.79e-14 73.2
Msa0713280 AT3G63280.4 27.717 184 108 4 4 164 56 237 1.88e-14 73.2
Msa0713280 AT4G04695.1 35.359 181 84 8 6 156 28 205 2.03e-14 72.8
Msa0713280 AT3G50530.1 33.702 181 93 7 5 158 147 327 2.53e-14 72.8
Msa0713280 AT1G49580.1 33.333 183 95 7 3 158 147 329 2.78e-14 72.4
Msa0713280 AT1G54510.4 27.174 184 109 4 4 164 2 183 1.10e-13 70.9
Msa0713280 AT1G54510.2 27.174 184 109 4 4 164 2 183 1.10e-13 70.9
Msa0713280 AT1G54510.1 27.174 184 109 4 4 164 2 183 1.10e-13 70.9
Msa0713280 AT1G54510.3 27.174 184 109 4 4 164 2 183 1.10e-13 70.9
Msa0713280 AT4G38470.2 28.333 180 102 6 12 169 296 470 1.12e-13 70.9
Msa0713280 AT4G38470.3 28.333 180 102 6 12 169 296 470 1.54e-13 70.1
Msa0713280 AT4G38470.1 28.571 175 98 6 12 164 296 465 1.93e-13 70.1
Msa0713280 AT3G49370.1 32.240 183 97 6 3 158 139 321 2.06e-13 70.1
Msa0713280 AT4G04710.4 32.967 182 93 6 3 156 33 213 2.39e-13 69.7
Msa0713280 AT4G04710.2 32.967 182 93 6 3 156 33 213 2.70e-13 69.3
Msa0713280 AT4G04710.1 32.967 182 93 6 3 156 33 213 2.71e-13 69.3
Msa0713280 AT5G28290.1 27.174 184 109 4 4 164 2 183 3.03e-13 69.3
Msa0713280 AT5G28290.2 27.174 184 109 4 4 164 2 183 3.03e-13 69.3
Msa0713280 AT5G28290.3 27.174 184 109 4 4 164 2 183 3.08e-13 69.3
Msa0713280 AT2G46700.1 32.967 182 93 8 5 158 142 322 3.45e-13 69.3
Msa0713280 AT1G18160.1 31.050 219 110 10 4 188 713 924 4.15e-13 69.3
Msa0713280 AT1G18160.2 31.050 219 110 10 4 188 713 924 4.51e-13 68.9
Msa0713280 AT3G15220.1 32.386 176 97 4 5 160 14 187 1.43e-12 67.4
Msa0713280 AT4G31170.7 28.492 179 98 4 12 164 137 311 1.83e-12 67.0
Msa0713280 AT4G31170.6 28.492 179 98 4 12 164 137 311 1.83e-12 67.0
Msa0713280 AT4G31170.5 28.492 179 98 4 12 164 137 311 1.83e-12 67.0
Msa0713280 AT4G31170.1 28.492 179 98 4 12 164 137 311 1.83e-12 67.0
Msa0713280 AT4G31170.2 28.492 179 98 4 12 164 137 311 1.83e-12 67.0
Msa0713280 AT4G31170.3 28.492 179 98 4 12 164 137 311 1.83e-12 67.0
Msa0713280 AT4G31170.8 28.492 179 98 4 12 164 137 311 1.83e-12 67.0
Msa0713280 AT5G58140.6 30.435 207 83 9 6 157 577 777 3.28e-12 66.6
Msa0713280 AT5G58140.7 30.435 207 83 9 6 157 577 777 3.28e-12 66.6
Msa0713280 AT5G58140.5 30.435 207 83 9 6 157 577 777 3.28e-12 66.6
Msa0713280 AT5G58140.2 30.435 207 83 9 6 157 577 777 3.28e-12 66.6
Msa0713280 AT5G58140.1 30.435 207 83 9 6 157 577 777 3.28e-12 66.6
Msa0713280 AT5G58140.3 30.435 207 83 9 6 157 577 777 3.97e-12 66.2
Msa0713280 AT1G73660.1 33.143 175 81 7 45 188 788 957 4.01e-12 66.2
Msa0713280 AT5G11850.1 29.545 176 98 5 4 156 607 779 4.99e-12 65.9
Msa0713280 AT3G61160.3 32.184 174 82 8 12 156 108 274 7.29e-12 64.7
Msa0713280 AT3G61160.6 32.184 174 82 8 12 156 115 281 7.99e-12 64.7
Msa0713280 AT3G61160.5 32.184 174 82 8 12 156 108 274 8.14e-12 64.7
Msa0713280 AT3G06620.1 31.250 192 93 7 6 164 487 672 8.59e-12 65.1
Msa0713280 AT5G57565.5 36.364 110 52 4 62 155 19 126 9.04e-12 61.6
Msa0713280 AT5G57565.1 36.364 110 52 4 62 155 19 126 9.04e-12 61.6
Msa0713280 AT3G04810.2 25.543 184 112 4 4 164 2 183 1.16e-11 64.7
Msa0713280 AT3G04810.1 25.543 184 112 4 4 164 2 183 1.16e-11 64.7
Msa0713280 AT3G04810.3 25.543 184 112 4 4 164 2 183 1.16e-11 64.7
Msa0713280 AT3G44200.2 28.571 182 103 5 4 161 6 184 1.27e-11 64.7
Msa0713280 AT3G44200.1 28.571 182 103 5 4 161 6 184 1.27e-11 64.7
Msa0713280 AT1G53165.3 32.022 178 95 5 5 160 14 187 1.40e-11 64.7
Msa0713280 AT1G53165.2 32.022 178 95 5 5 160 14 187 1.53e-11 64.3
Msa0713280 AT2G42640.4 30.806 211 111 8 5 186 489 693 1.57e-11 64.3
Msa0713280 AT1G53165.1 32.022 178 95 5 5 160 14 187 1.57e-11 64.3
Msa0713280 AT2G42640.1 30.806 211 111 8 5 186 527 731 1.58e-11 64.3
Msa0713280 AT3G61160.4 32.184 174 82 8 12 156 108 274 1.68e-11 63.9
Msa0713280 AT3G61160.1 32.184 174 82 8 12 156 108 274 1.77e-11 63.9
Msa0713280 AT3G61160.2 32.184 174 82 8 12 156 115 281 2.17e-11 63.9
Msa0713280 AT4G13020.1 34.286 175 87 8 4 156 2 170 2.73e-11 63.5
Msa0713280 AT1G08720.1 31.429 175 88 7 8 156 671 839 2.87e-11 63.9
Msa0713280 AT4G10730.2 28.409 176 99 4 6 156 27 200 2.89e-11 63.5
Msa0713280 AT4G13020.4 34.286 175 87 8 4 156 2 170 2.90e-11 63.2
Msa0713280 AT4G13020.7 34.286 175 87 8 4 156 2 170 3.04e-11 63.2
Msa0713280 AT1G08720.2 31.429 175 88 7 8 156 671 839 3.07e-11 63.5
Msa0713280 AT4G10730.1 28.409 176 99 4 6 156 47 220 3.25e-11 63.5
Msa0713280 AT1G54960.1 28.736 174 93 4 12 156 74 245 3.54e-11 63.2
Msa0713280 AT1G54960.2 28.736 174 93 4 12 156 74 245 3.54e-11 63.2
Msa0713280 AT4G13020.6 34.286 175 87 8 4 156 2 170 3.57e-11 63.2
Msa0713280 AT1G67580.1 32.022 178 92 6 4 156 404 577 4.09e-11 63.2
Msa0713280 AT1G67580.2 32.022 178 92 6 4 156 404 577 4.09e-11 63.2
Msa0713280 AT5G56580.1 30.978 184 97 6 4 162 68 246 4.63e-11 62.4
Msa0713280 AT4G08500.1 30.508 177 91 8 12 163 339 508 5.59e-11 62.8
Msa0713280 AT5G57565.4 35.780 109 52 4 62 154 19 125 5.75e-11 60.5
Msa0713280 AT1G09840.3 30.682 176 82 9 12 156 89 255 7.86e-11 62.0
Msa0713280 AT1G09840.7 30.682 176 82 9 12 156 89 255 7.86e-11 62.0
Msa0713280 AT1G09840.10 30.682 176 82 9 12 156 89 255 7.86e-11 62.0
Msa0713280 AT1G09840.6 30.682 176 82 9 12 156 89 255 7.86e-11 62.0
Msa0713280 AT1G09840.4 30.682 176 82 9 12 156 89 255 7.86e-11 62.0
Msa0713280 AT1G09840.1 30.682 176 82 9 12 156 89 255 7.86e-11 62.0
Msa0713280 AT1G09840.9 30.682 176 82 9 12 156 89 255 7.86e-11 62.0
Msa0713280 AT1G09840.5 30.682 176 82 9 12 156 89 255 7.86e-11 62.0
Msa0713280 AT1G09840.8 30.682 176 82 9 12 156 89 255 7.86e-11 62.0
Msa0713280 AT1G09840.2 30.682 176 82 9 12 156 89 255 7.86e-11 62.0

Find 70 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGAACCTGATAATATT+TGG 0.162136 5_1:-5401579 None:intergenic
GAAATTGGAGAACACTTTAT+TGG 0.186511 5_1:+5402243 Msa0713280:CDS
CACTTTGTTGGCTTGGTAAT+TGG 0.193657 5_1:-5404471 None:intergenic
TAGTTAACCATCGATCTTTA+AGG 0.208924 5_1:+5401553 Msa0713280:CDS
AGGAGTTCCAACTGTTGATT+TGG 0.280057 5_1:-5402436 None:intergenic
ATATTGAAGGACCTTGGTTC+TGG 0.311109 5_1:+5400275 Msa0713280:CDS
TAAGGCATCCAAATATTATC+AGG 0.313562 5_1:+5401571 Msa0713280:CDS
GTAGGAGAAGCAAGGATATC+AGG 0.316263 5_1:+5404514 Msa0713280:CDS
TAAGACAACACCCTTGGTTT+TGG 0.317341 5_1:+5404386 Msa0713280:CDS
TTGAGCCTCAACTATCTCTC+TGG 0.317942 5_1:-5404419 None:intergenic
TGGGTGTTAACGTTGTTAAA+TGG 0.338207 5_1:+5404566 Msa0713280:CDS
ATACATTGAAAGAGGATATA+AGG 0.373395 5_1:+5400358 Msa0713280:CDS
TTGTCATAGAGATCTGAAAT+TGG 0.374086 5_1:+5402228 Msa0713280:CDS
TCTTCCACACTTTGTTGGCT+TGG 0.374908 5_1:-5404478 None:intergenic
GACCTTGGTTCTGGAAACTT+TGG 0.375435 5_1:+5400284 Msa0713280:CDS
CGAGTTAAAATTTGTGACTT+TGG 0.378323 5_1:+5402283 Msa0713280:CDS
ATTTGTGACACCTACTCATT+TGG 0.380179 5_1:+5401684 Msa0713280:CDS
TGATTTCTTCCACACTTTGT+TGG 0.388594 5_1:-5404483 None:intergenic
TACTCATTTGGCTATTGTCC+TGG 0.405251 5_1:+5401696 Msa0713280:CDS
CAATGGTGGAACAAGCTCAT+TGG 0.407128 5_1:+5404546 Msa0713280:CDS
AAAATTAATTAAGTTGGACT+TGG 0.449550 5_1:-5404624 None:intergenic
AATGGTGGAACAAGCTCATT+GGG 0.454775 5_1:+5404547 Msa0713280:CDS
GGAGTTCCAACTGTTGATTT+GGG 0.455071 5_1:-5402435 None:intergenic
ATTGTCCTGGAGTATGCTGC+TGG 0.493405 5_1:+5401709 Msa0713280:CDS
ATAGTTGAGGCTCAAAGAAA+AGG 0.494600 5_1:+5404427 Msa0713280:CDS
TGGATTGAAGAGGAAGTTGA+TGG 0.497603 5_1:+5404586 Msa0713280:CDS
CTGGAAACTTTGGAGTGGCT+AGG 0.501022 5_1:+5400294 Msa0713280:CDS
GATTGATGAGAATGTTCAAA+GGG 0.502788 5_1:+5401527 Msa0713280:intron
GCTATCAAATACATTGAAAG+AGG 0.506950 5_1:+5400350 Msa0713280:CDS
TGTCTAGAAGAGAGTATGAT+GGG 0.509576 5_1:+5402481 Msa0713280:CDS
TGAGCCTCAACTATCTCTCT+GGG 0.513045 5_1:-5404418 None:intergenic
TTGGAGAACACTTTATTGGA+TGG 0.521645 5_1:+5402247 Msa0713280:CDS
ACCTCTGGTGCAATATATGC+AGG 0.524189 5_1:-5402456 None:intergenic
TTTGGACTGTGAAATGGAGG+AGG 0.524878 5_1:+5400241 None:intergenic
TTGTCTAGAAGAGAGTATGA+TGG 0.532228 5_1:+5402480 Msa0713280:CDS
CACCACCAGCAGCATACTCC+AGG 0.534204 5_1:-5401714 None:intergenic
AGAAGCAAGGATATCAGGGC+TGG 0.535373 5_1:+5404519 Msa0713280:CDS
TTTGACAGGATAGCCTCTGC+TGG 0.539379 5_1:+5401742 Msa0713280:CDS
TTGGCTAAAGACAAGAAGAC+AGG 0.541616 5_1:+5400317 Msa0713280:CDS
TACGAGATATTGAAGGACCT+TGG 0.546394 5_1:+5400269 Msa0713280:CDS
AAACTTTGGAGTGGCTAGGT+TGG 0.550074 5_1:+5400298 Msa0713280:CDS
CAGAGATAAGACAACACCCT+TGG 0.550941 5_1:+5404380 Msa0713280:CDS
TAGAAGAGAGTATGATGGGA+AGG 0.554035 5_1:+5402485 Msa0713280:CDS
TTGGATGCCTTAAAGATCGA+TGG 0.554465 5_1:-5401560 None:intergenic
GAAGAAATCATGCGGGTCGT+AGG 0.562117 5_1:+5404496 Msa0713280:CDS
TTGTGACTTTGGTTTCTCCA+AGG 0.569571 5_1:+5402294 Msa0713280:CDS
GGAAAGATACGAGATATTGA+AGG 0.574341 5_1:+5400262 Msa0713280:CDS
CGTTGTTAAATGGATTGAAG+AGG 0.579688 5_1:+5404576 Msa0713280:CDS
TAGGAGAAGCAAGGATATCA+GGG 0.581308 5_1:+5404515 Msa0713280:CDS
TCTCTTCTAGACAAAACCTC+TGG 0.582510 5_1:-5402471 None:intergenic
TCCTGCATATATTGCACCAG+AGG 0.593052 5_1:+5402455 Msa0713280:CDS
TTCACTGAGTCGACCAGCAG+AGG 0.595957 5_1:-5401755 None:intergenic
CTGTTGATTTGGGCTGAGAG+TGG 0.596102 5_1:-5402425 None:intergenic
GGCATGTTCTTCCAAAACCA+AGG 0.596499 5_1:-5404397 None:intergenic
ATTACCAAGCCAACAAAGTG+TGG 0.598446 5_1:+5404474 Msa0713280:CDS
TCTCAGCCCAAATCAACAGT+TGG 0.612415 5_1:+5402429 Msa0713280:CDS
TGGTTCTGGAAACTTTGGAG+TGG 0.627082 5_1:+5400289 Msa0713280:CDS
GTCCTGGAGTATGCTGCTGG+TGG 0.627234 5_1:+5401712 Msa0713280:CDS
AGATTGATGAGAATGTTCAA+AGG 0.630059 5_1:+5401526 Msa0713280:intron
AAATATTATCAGGTTCAAAG+AGG 0.640987 5_1:+5401581 Msa0713280:CDS
AGGACAATAGCCAAATGAGT+AGG 0.642178 5_1:-5401694 None:intergenic
GCATGTTCTTCCAAAACCAA+GGG 0.643450 5_1:-5404396 None:intergenic
TGCGGGTCGTAGGAGAAGCA+AGG 0.645222 5_1:+5404506 Msa0713280:CDS
TGGTCGACTCAGTGAAGATG+AGG 0.646333 5_1:+5401762 Msa0713280:CDS
CTCCAAAGTTTCCAGAACCA+AGG 0.649981 5_1:-5400286 None:intergenic
AAGTGTGGAAGAAATCATGC+GGG 0.653176 5_1:+5404489 Msa0713280:CDS
AAAGTGTGGAAGAAATCATG+CGG 0.656102 5_1:+5404488 Msa0713280:CDS
TCAGGGCTGGAAAACAATGG+TGG 0.656605 5_1:+5404532 Msa0713280:CDS
ATATCAGGGCTGGAAAACAA+TGG 0.685708 5_1:+5404529 Msa0713280:CDS
CATGCCCAGAGAGATAGTTG+AGG 0.709351 5_1:+5404414 Msa0713280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGGATATATTAAATTAATTA+GGG - chr5_1:5402387-5402406 None:intergenic 10.0%
!! ATGGATATATTAAATTAATT+AGG - chr5_1:5402388-5402407 None:intergenic 10.0%
!! GTTTGAAAATATTTAATAAA+AGG + chr5_1:5403887-5403906 Msa0713280:intron 10.0%
!! ATATTTAATAAAAGGAAAAA+TGG + chr5_1:5403895-5403914 Msa0713280:intron 10.0%
! CGGGGGGGGGGGGGGGGGGG+TGG + chr5_1:5400973-5400992 Msa0713280:intron 100.0%
!!! AATATTTTCTGCTAAATAAA+AGG + chr5_1:5400467-5400486 Msa0713280:intron 15.0%
!!! AAAGGATTAATTTGATATTT+TGG + chr5_1:5400485-5400504 Msa0713280:intron 15.0%
!!! AATAATAATGTTTTAGTTTG+TGG - chr5_1:5401245-5401264 None:intergenic 15.0%
!!! TCATCATTGATTTTTTTTTT+TGG + chr5_1:5401369-5401388 Msa0713280:intron 15.0%
!! AACTATCTTAATTATATTTG+TGG + chr5_1:5401496-5401515 Msa0713280:intron 15.0%
!!! TTTTTTTGTTTGTTTTGAAA+TGG + chr5_1:5402749-5402768 Msa0713280:intron 15.0%
!!! TTGATTTTTTTTTTTGGTTG+TGG + chr5_1:5401375-5401394 Msa0713280:intron 20.0%
!!! ATGACAAATTTTTTTTATGC+AGG + chr5_1:5401660-5401679 Msa0713280:intron 20.0%
!! ATGTCAATATTGTCAAATAA+CGG - chr5_1:5402002-5402021 None:intergenic 20.0%
!! AACAAAAAAATCAGTACAAT+TGG - chr5_1:5402739-5402758 None:intergenic 20.0%
!! AAAATGCATCTTGTTAATAT+AGG - chr5_1:5403028-5403047 None:intergenic 20.0%
!! TTAGATAAAAAATCTAGCTA+GGG - chr5_1:5404243-5404262 None:intergenic 20.0%
! ATACATTGAAAGAGGATATA+AGG + chr5_1:5400358-5400377 Msa0713280:CDS 25.0%
!!! AAAGTGTTGAATAAGATATC+CGG - chr5_1:5400708-5400727 None:intergenic 25.0%
!!! TGAAATTTTTAGCTTGAAAG+TGG + chr5_1:5400840-5400859 Msa0713280:intron 25.0%
! CAAAACAAAAACCGAAAAAA+AGG - chr5_1:5401039-5401058 None:intergenic 25.0%
!!! CTTTTTTTCGGTTTTTGTTT+TGG + chr5_1:5401037-5401056 Msa0713280:intron 25.0%
!!! TTTGTTTTTCTCTTCTTTGT+AGG + chr5_1:5401086-5401105 Msa0713280:intron 25.0%
!!! TTGTTTTTCTCTTCTTTGTA+GGG + chr5_1:5401087-5401106 Msa0713280:intron 25.0%
!!! TTGTGGCAGATTTTTTTTTT+TGG - chr5_1:5401228-5401247 None:intergenic 25.0%
! TCTTTGAACCTGATAATATT+TGG - chr5_1:5401582-5401601 None:intergenic 25.0%
! AAATATTATCAGGTTCAAAG+AGG + chr5_1:5401581-5401600 Msa0713280:CDS 25.0%
! TGATATATAGTATATGCAGA+TGG - chr5_1:5401813-5401832 None:intergenic 25.0%
!!! AAAAAAGTGTTGTCGAATAA+TGG - chr5_1:5401911-5401930 None:intergenic 25.0%
!!! CATTTTAATGCTATTAACCT+TGG - chr5_1:5402314-5402333 None:intergenic 25.0%
! AAGCTACATATCAATGTATT+TGG + chr5_1:5402537-5402556 Msa0713280:intron 25.0%
!! TGTTGATTGTAGTAACTAAA+AGG - chr5_1:5402604-5402623 None:intergenic 25.0%
! AATCAACAAATTTCAGTAGT+TGG + chr5_1:5402616-5402635 Msa0713280:intron 25.0%
!! AACAAGATGCATTTTCTTTT+CGG + chr5_1:5403033-5403052 Msa0713280:intron 25.0%
!!! GAGCAATATAATTTTGAGAT+GGG + chr5_1:5403100-5403119 Msa0713280:intron 25.0%
!! TGTAGATTTTACGAAAATCA+TGG + chr5_1:5403314-5403333 Msa0713280:intron 25.0%
! AAATTTCAGAGCGAATATTA+CGG + chr5_1:5403523-5403542 Msa0713280:intron 25.0%
! TGAATTTAGATGATGCAAAA+AGG + chr5_1:5403859-5403878 Msa0713280:intron 25.0%
!! ACCATCTGATTTTAAATCAA+TGG + chr5_1:5404036-5404055 Msa0713280:intron 25.0%
!!! ACCATTGATTTAAAATCAGA+TGG - chr5_1:5404040-5404059 None:intergenic 25.0%
! CTTAGATAAAAAATCTAGCT+AGG - chr5_1:5404244-5404263 None:intergenic 25.0%
!! TTTTGCCTTCTTTTATAAAG+AGG + chr5_1:5404347-5404366 Msa0713280:intron 25.0%
GCTATCAAATACATTGAAAG+AGG + chr5_1:5400350-5400369 Msa0713280:CDS 30.0%
AAATGTGAGATCAGATAACT+TGG - chr5_1:5400542-5400561 None:intergenic 30.0%
AAGTTATCTGATCTCACATT+TGG + chr5_1:5400541-5400560 Msa0713280:intron 30.0%
!!! ATATTTTTTGCCACTCCTTT+CGG + chr5_1:5400639-5400658 Msa0713280:intron 30.0%
TTTGAGTACTTCTTAGGATT+AGG + chr5_1:5400725-5400744 Msa0713280:intron 30.0%
TCTATCAATCAGATCATTAC+GGG - chr5_1:5400819-5400838 None:intergenic 30.0%
CTCTATCAATCAGATCATTA+CGG - chr5_1:5400820-5400839 None:intergenic 30.0%
!!! TTGTGGTGATTCCTTTTTTT+CGG + chr5_1:5401025-5401044 Msa0713280:intron 30.0%
!!! TTTTTCGGTTTTTGTTTTGG+TGG + chr5_1:5401040-5401059 Msa0713280:intron 30.0%
!!! TTTTCGGTTTTTGTTTTGGT+GGG + chr5_1:5401041-5401060 Msa0713280:intron 30.0%
! TGTTTTTCTCTTCTTTGTAG+GGG + chr5_1:5401088-5401107 Msa0713280:intron 30.0%
!!! GGCAGATTTTTTTTTTTGGA+TGG - chr5_1:5401224-5401243 None:intergenic 30.0%
! CTTTTGCTAGAACTATATGT+TGG - chr5_1:5401313-5401332 None:intergenic 30.0%
TAATCTATAGTACTTCGTTG+TGG - chr5_1:5401471-5401490 None:intergenic 30.0%
AGATTGATGAGAATGTTCAA+AGG + chr5_1:5401526-5401545 Msa0713280:intron 30.0%
GATTGATGAGAATGTTCAAA+GGG + chr5_1:5401527-5401546 Msa0713280:intron 30.0%
TAGTTAACCATCGATCTTTA+AGG + chr5_1:5401553-5401572 Msa0713280:CDS 30.0%
! TAAGGCATCCAAATATTATC+AGG + chr5_1:5401571-5401590 Msa0713280:CDS 30.0%
ATATTGTCAAATAACGGCTA+TGG - chr5_1:5401996-5402015 None:intergenic 30.0%
TGATGAATTCCATATACTAC+AGG + chr5_1:5402046-5402065 Msa0713280:intron 30.0%
AAAATCTTGCCTGTAGTATA+TGG - chr5_1:5402058-5402077 None:intergenic 30.0%
ATGGTATATATATGTGCACT+CGG + chr5_1:5402119-5402138 Msa0713280:intron 30.0%
! TTGTCATAGAGATCTGAAAT+TGG + chr5_1:5402228-5402247 Msa0713280:CDS 30.0%
GAAATTGGAGAACACTTTAT+TGG + chr5_1:5402243-5402262 Msa0713280:CDS 30.0%
!!! AAGTCACAAATTTTAACTCG+AGG - chr5_1:5402283-5402302 None:intergenic 30.0%
CGAGTTAAAATTTGTGACTT+TGG + chr5_1:5402283-5402302 Msa0713280:CDS 30.0%
TACCTTGTAATCACTACAAT+TGG - chr5_1:5402776-5402795 None:intergenic 30.0%
GAAGGCTTATAAGAATTGTT+TGG + chr5_1:5402997-5403016 Msa0713280:intron 30.0%
!! GGAGCAATATAATTTTGAGA+TGG + chr5_1:5403099-5403118 Msa0713280:intron 30.0%
GTTTGAATTAACAGTGAGAT+TGG - chr5_1:5403358-5403377 None:intergenic 30.0%
! GCATAATTGATAATTTGCGA+AGG - chr5_1:5403418-5403437 None:intergenic 30.0%
ACTCTTTATGTCATGTTAGT+TGG + chr5_1:5403467-5403486 Msa0713280:intron 30.0%
!! ATATTCGCTCTGAAATTTCT+AGG - chr5_1:5403521-5403540 None:intergenic 30.0%
AATATTTACCTTAGCTGGAT+TGG - chr5_1:5403734-5403753 None:intergenic 30.0%
AGACTAATATTTACCTTAGC+TGG - chr5_1:5403739-5403758 None:intergenic 30.0%
ATTTAGATGATGCAAAAAGG+TGG + chr5_1:5403862-5403881 Msa0713280:intron 30.0%
TCTTACGCATTGAAACTATT+CGG + chr5_1:5403922-5403941 Msa0713280:intron 30.0%
CATATATGGAAAATGCTTGT+TGG - chr5_1:5403975-5403994 None:intergenic 30.0%
! CAACAAGCATTTTCCATATA+TGG + chr5_1:5403973-5403992 Msa0713280:intron 30.0%
! GCATTTTCCATATATGGAAT+TGG + chr5_1:5403979-5403998 Msa0713280:intron 30.0%
! TTTTCCATATATGGAATTGG+CGG + chr5_1:5403982-5404001 Msa0713280:intron 30.0%
TTTAAATCAATGGTCGAGAT+TGG + chr5_1:5404046-5404065 Msa0713280:intron 30.0%
ATAATTATTGCATGCAATCC+AGG + chr5_1:5404145-5404164 Msa0713280:intron 30.0%
GTGATCCTCTTTATAAAAGA+AGG - chr5_1:5404355-5404374 None:intergenic 30.0%
GGAAAGATACGAGATATTGA+AGG + chr5_1:5400262-5400281 Msa0713280:CDS 35.0%
CAACACTTTGAGTACTTCTT+AGG + chr5_1:5400719-5400738 Msa0713280:intron 35.0%
! TTAGCTTGAAAGTGGTTTCT+AGG + chr5_1:5400848-5400867 Msa0713280:intron 35.0%
TCTCACTCATAAAAAGAGCA+AGG - chr5_1:5400890-5400909 None:intergenic 35.0%
! TTGCTCTTTTTATGAGTGAG+AGG + chr5_1:5400889-5400908 Msa0713280:intron 35.0%
ATCTTGTGTTTGACCTAGTA+GGG + chr5_1:5400920-5400939 Msa0713280:intron 35.0%
GAAAAAAAGGAATCACCACA+AGG - chr5_1:5401026-5401045 None:intergenic 35.0%
TAAGAGTAACACACAACACA+AGG - chr5_1:5401153-5401172 None:intergenic 35.0%
!! TAGCAAAAGCTGATTTGTTG+TGG + chr5_1:5401324-5401343 Msa0713280:intron 35.0%
ATTTGTGACACCTACTCATT+TGG + chr5_1:5401684-5401703 Msa0713280:CDS 35.0%
ATAACGTATCGCAGAACATT+AGG + chr5_1:5401939-5401958 Msa0713280:intron 35.0%
TAACGTATCGCAGAACATTA+GGG + chr5_1:5401940-5401959 Msa0713280:intron 35.0%
GAGTGCACATATATATACCA+TGG - chr5_1:5402120-5402139 None:intergenic 35.0%
TTGGAGAACACTTTATTGGA+TGG + chr5_1:5402247-5402266 Msa0713280:CDS 35.0%
! TTGTCTAGAAGAGAGTATGA+TGG + chr5_1:5402480-5402499 Msa0713280:CDS 35.0%
! TGTCTAGAAGAGAGTATGAT+GGG + chr5_1:5402481-5402500 Msa0713280:CDS 35.0%
GAGCATGTTTAAATGCTACT+CGG + chr5_1:5402559-5402578 Msa0713280:intron 35.0%
TGTTCGTCAGATCATTATCA+AGG + chr5_1:5402703-5402722 Msa0713280:intron 35.0%
GACCAATTGTAGTGATTACA+AGG + chr5_1:5402771-5402790 Msa0713280:intron 35.0%
TTTGGATTGTCAGCATACTA+TGG - chr5_1:5402805-5402824 None:intergenic 35.0%
CATATAGTCTCATACCTACA+CGG - chr5_1:5402970-5402989 None:intergenic 35.0%
GTATGAGACTATATGGTTGA+AGG + chr5_1:5402975-5402994 Msa0713280:intron 35.0%
TTATGCAGATTGCAGATGTT+TGG + chr5_1:5403432-5403451 Msa0713280:intron 35.0%
GATCTTCTGGATCTTCAAAA+GGG - chr5_1:5403499-5403518 None:intergenic 35.0%
!! CTGAAATTTCTAGGATCTTC+TGG - chr5_1:5403512-5403531 None:intergenic 35.0%
TACACATATCTGCAGATTGT+AGG + chr5_1:5403683-5403702 Msa0713280:intron 35.0%
ACACATATCTGCAGATTGTA+GGG + chr5_1:5403684-5403703 Msa0713280:intron 35.0%
CTTACGCATTGAAACTATTC+GGG + chr5_1:5403923-5403942 Msa0713280:intron 35.0%
AGATTGTGTATATATCGACC+TGG - chr5_1:5404166-5404185 None:intergenic 35.0%
ATAGTTGAGGCTCAAAGAAA+AGG + chr5_1:5404427-5404446 Msa0713280:CDS 35.0%
TGATTTCTTCCACACTTTGT+TGG - chr5_1:5404486-5404505 None:intergenic 35.0%
AAAGTGTGGAAGAAATCATG+CGG + chr5_1:5404488-5404507 Msa0713280:CDS 35.0%
TGGGTGTTAACGTTGTTAAA+TGG + chr5_1:5404566-5404585 Msa0713280:CDS 35.0%
!! CGTTGTTAAATGGATTGAAG+AGG + chr5_1:5404576-5404595 Msa0713280:CDS 35.0%
TACGAGATATTGAAGGACCT+TGG + chr5_1:5400269-5400288 Msa0713280:CDS 40.0%
ATATTGAAGGACCTTGGTTC+TGG + chr5_1:5400275-5400294 Msa0713280:CDS 40.0%
TTGGCTAAAGACAAGAAGAC+AGG + chr5_1:5400317-5400336 Msa0713280:CDS 40.0%
! GATCAATGGCAATTGAGTTG+GGG - chr5_1:5400517-5400536 None:intergenic 40.0%
CGATCAATGGCAATTGAGTT+GGG - chr5_1:5400518-5400537 None:intergenic 40.0%
TCGATCAATGGCAATTGAGT+TGG - chr5_1:5400519-5400538 None:intergenic 40.0%
CAGATAACTTGGTCGATCAA+TGG - chr5_1:5400531-5400550 None:intergenic 40.0%
CTAACTGATACCAAACCGAA+AGG - chr5_1:5400657-5400676 None:intergenic 40.0%
TTTGGTATCAGTTAGCTAGG+TGG + chr5_1:5400662-5400681 Msa0713280:intron 40.0%
TACTTCTTAGGATTAGGCGT+GGG + chr5_1:5400731-5400750 Msa0713280:intron 40.0%
!! GACTAGGGCTTCTTTTAGTT+TGG + chr5_1:5400765-5400784 Msa0713280:intron 40.0%
TAGTTTGGCATGTTGTTCTG+TGG + chr5_1:5400780-5400799 Msa0713280:intron 40.0%
CATCTTGTGTTTGACCTAGT+AGG + chr5_1:5400919-5400938 Msa0713280:intron 40.0%
! TTTGACCTAGTAGGGTTTTG+TGG + chr5_1:5400928-5400947 Msa0713280:intron 40.0%
TTTCTCTTCTTTGTAGGGGA+TGG + chr5_1:5401092-5401111 Msa0713280:intron 40.0%
TTGGATGCCTTAAAGATCGA+TGG - chr5_1:5401563-5401582 None:intergenic 40.0%
AGGACAATAGCCAAATGAGT+AGG - chr5_1:5401697-5401716 None:intergenic 40.0%
TACTCATTTGGCTATTGTCC+TGG + chr5_1:5401696-5401715 Msa0713280:CDS 40.0%
CTATGGCAGCTATAGTTTAG+TGG - chr5_1:5401979-5401998 None:intergenic 40.0%
TTCTTCCAGCAACTGATATC+TGG + chr5_1:5402077-5402096 Msa0713280:intron 40.0%
TAACTCCAGATATCAGTTGC+TGG - chr5_1:5402085-5402104 None:intergenic 40.0%
AGTTAGCTACTGTCATTCCA+TGG + chr5_1:5402100-5402119 Msa0713280:intron 40.0%
! AATTTTGCATATCCTGCTGC+AGG + chr5_1:5402201-5402220 Msa0713280:intron 40.0%
TATGACAAATTTCCTGCAGC+AGG - chr5_1:5402216-5402235 None:intergenic 40.0%
!!! CAAATTTTAACTCGAGGAGC+TGG - chr5_1:5402277-5402296 None:intergenic 40.0%
! TTGTGACTTTGGTTTCTCCA+AGG + chr5_1:5402294-5402313 Msa0713280:CDS 40.0%
!! GGAGTTCCAACTGTTGATTT+GGG - chr5_1:5402438-5402457 None:intergenic 40.0%
! AGGAGTTCCAACTGTTGATT+TGG - chr5_1:5402439-5402458 None:intergenic 40.0%
TCTCTTCTAGACAAAACCTC+TGG - chr5_1:5402474-5402493 None:intergenic 40.0%
! TAGAAGAGAGTATGATGGGA+AGG + chr5_1:5402485-5402504 Msa0713280:CDS 40.0%
CGTGTAGGTATGAGACTATA+TGG + chr5_1:5402968-5402987 Msa0713280:intron 40.0%
GAGACTATATGGTTGAAGGA+AGG + chr5_1:5402979-5402998 Msa0713280:intron 40.0%
GCTTAACTGTGGAGTTCTTA+TGG - chr5_1:5403068-5403087 None:intergenic 40.0%
!! AAAAGACTCGTGTTGGTTTG+TGG + chr5_1:5403176-5403195 Msa0713280:intron 40.0%
!! AAAGACTCGTGTTGGTTTGT+GGG + chr5_1:5403177-5403196 Msa0713280:intron 40.0%
CAGTGAGATTGGCAGAATTA+TGG - chr5_1:5403347-5403366 None:intergenic 40.0%
ATTGCAGATGTTTGGTCATG+TGG + chr5_1:5403440-5403459 Msa0713280:intron 40.0%
GGATCTTCTGGATCTTCAAA+AGG - chr5_1:5403500-5403519 None:intergenic 40.0%
GCAGATATGTGTACATAGTC+AGG - chr5_1:5403676-5403695 None:intergenic 40.0%
! TTTTGTTGCCAATCCAGCTA+AGG + chr5_1:5403723-5403742 Msa0713280:intron 40.0%
ATTGCCGCCAATTCCATATA+TGG - chr5_1:5403989-5404008 None:intergenic 40.0%
! TAAGACAACACCCTTGGTTT+TGG + chr5_1:5404386-5404405 Msa0713280:CDS 40.0%
GCATGTTCTTCCAAAACCAA+GGG - chr5_1:5404399-5404418 None:intergenic 40.0%
!! CACTTTGTTGGCTTGGTAAT+TGG - chr5_1:5404474-5404493 None:intergenic 40.0%
ATTACCAAGCCAACAAAGTG+TGG + chr5_1:5404474-5404493 Msa0713280:CDS 40.0%
AAGTGTGGAAGAAATCATGC+GGG + chr5_1:5404489-5404508 Msa0713280:CDS 40.0%
TAGGAGAAGCAAGGATATCA+GGG + chr5_1:5404515-5404534 Msa0713280:CDS 40.0%
ATATCAGGGCTGGAAAACAA+TGG + chr5_1:5404529-5404548 Msa0713280:CDS 40.0%
! AATGGTGGAACAAGCTCATT+GGG + chr5_1:5404547-5404566 Msa0713280:CDS 40.0%
TGGATTGAAGAGGAAGTTGA+TGG + chr5_1:5404586-5404605 Msa0713280:CDS 40.0%
!! GACCTTGGTTCTGGAAACTT+TGG + chr5_1:5400284-5400303 Msa0713280:CDS 45.0%
CTCCAAAGTTTCCAGAACCA+AGG - chr5_1:5400289-5400308 None:intergenic 45.0%
!! TGGTTCTGGAAACTTTGGAG+TGG + chr5_1:5400289-5400308 Msa0713280:CDS 45.0%
!! AAACTTTGGAGTGGCTAGGT+TGG + chr5_1:5400298-5400317 Msa0713280:CDS 45.0%
! TTTTGCCACTCCTTTCGGTT+TGG + chr5_1:5400644-5400663 Msa0713280:intron 45.0%
TGATACCAAACCGAAAGGAG+TGG - chr5_1:5400652-5400671 None:intergenic 45.0%
!! CGGTTTGGTATCAGTTAGCT+AGG + chr5_1:5400659-5400678 Msa0713280:intron 45.0%
GTATCAGTTAGCTAGGTGGT+GGG + chr5_1:5400666-5400685 Msa0713280:intron 45.0%
GTACTTCTTAGGATTAGGCG+TGG + chr5_1:5400730-5400749 Msa0713280:intron 45.0%
ACTTCTTAGGATTAGGCGTG+GGG + chr5_1:5400732-5400751 Msa0713280:intron 45.0%
ATGTTGTTCTGTGGACCATC+TGG + chr5_1:5400789-5400808 Msa0713280:intron 45.0%
ATCATTACGGGTGTTCCAGA+TGG - chr5_1:5400807-5400826 None:intergenic 45.0%
TAAAAAGAGCAAGGACTCGC+CGG - chr5_1:5400881-5400900 None:intergenic 45.0%
TACCACCACAAAACCCTACT+AGG - chr5_1:5400936-5400955 None:intergenic 45.0%
AAGGAAATGACAGCTAGGAG+GGG - chr5_1:5401007-5401026 None:intergenic 45.0%
CAAGGAAATGACAGCTAGGA+GGG - chr5_1:5401008-5401027 None:intergenic 45.0%
ACAAGGAAATGACAGCTAGG+AGG - chr5_1:5401009-5401028 None:intergenic 45.0%
! TCCTAGCTGTCATTTCCTTG+TGG + chr5_1:5401008-5401027 Msa0713280:intron 45.0%
ACCACAAGGAAATGACAGCT+AGG - chr5_1:5401012-5401031 None:intergenic 45.0%
!!! TTTGGTGGGTTGTTTTCCTG+TGG + chr5_1:5401055-5401074 Msa0713280:intron 45.0%
!! GTTGTTTTCCTGTGGTGGTT+CGG + chr5_1:5401063-5401082 Msa0713280:intron 45.0%
AAAACAAACCGAACCACCAC+AGG - chr5_1:5401074-5401093 None:intergenic 45.0%
TTCTTTGTAGGGGATGGTGT+TGG + chr5_1:5401098-5401117 Msa0713280:intron 45.0%
! CCTTGACGTGTGTTCCTTTT+GGG + chr5_1:5401121-5401140 Msa0713280:intron 45.0%
! CTTGACGTGTGTTCCTTTTG+GGG + chr5_1:5401122-5401141 Msa0713280:intron 45.0%
!! CTGGTGGTGAACTTTTTGAC+AGG + chr5_1:5401728-5401747 Msa0713280:CDS 45.0%
GGAGTAAAGACGACTGCAAA+TGG - chr5_1:5402407-5402426 None:intergenic 45.0%
TCTCAGCCCAAATCAACAGT+TGG + chr5_1:5402429-5402448 Msa0713280:CDS 45.0%
TCCTGCATATATTGCACCAG+AGG + chr5_1:5402455-5402474 Msa0713280:CDS 45.0%
ACCTCTGGTGCAATATATGC+AGG - chr5_1:5402459-5402478 None:intergenic 45.0%
ACAATCCAAATACCCGACAG+TGG + chr5_1:5402815-5402834 Msa0713280:intron 45.0%
TACAACACCATAGCCACTGT+CGG - chr5_1:5402831-5402850 None:intergenic 45.0%
!! CTATGGTGTTGTAACACCCA+AGG + chr5_1:5402838-5402857 Msa0713280:intron 45.0%
CTAGAGGAACCGAATCACAT+CGG + chr5_1:5402925-5402944 Msa0713280:intron 45.0%
CCTCTCATTCCGATGTGATT+CGG - chr5_1:5402937-5402956 None:intergenic 45.0%
CGAATCACATCGGAATGAGA+GGG + chr5_1:5402935-5402954 Msa0713280:intron 45.0%
AAGTCAAGCACGCTTAACTG+TGG - chr5_1:5403079-5403098 None:intergenic 45.0%
ACAGTTAAGCGTGCTTGACT+TGG + chr5_1:5403078-5403097 Msa0713280:intron 45.0%
!! AAGACTCGTGTTGGTTTGTG+GGG + chr5_1:5403178-5403197 Msa0713280:intron 45.0%
TAACATCCCAGACTGCTTTC+AGG - chr5_1:5403216-5403235 None:intergenic 45.0%
! AAAGCAGTCTGGGATGTTAC+AGG + chr5_1:5403217-5403236 Msa0713280:intron 45.0%
ACAAAATCACAGTGACGACG+TGG + chr5_1:5403286-5403305 Msa0713280:intron 45.0%
ATTGGCAGAATTATGGCGAG+TGG - chr5_1:5403340-5403359 None:intergenic 45.0%
CGCAGTCACTAATTTACGTC+TGG - chr5_1:5404108-5404127 None:intergenic 45.0%
CAGAGATAAGACAACACCCT+TGG + chr5_1:5404380-5404399 Msa0713280:CDS 45.0%
GGCATGTTCTTCCAAAACCA+AGG - chr5_1:5404400-5404419 None:intergenic 45.0%
TGAGCCTCAACTATCTCTCT+GGG - chr5_1:5404421-5404440 None:intergenic 45.0%
TTGAGCCTCAACTATCTCTC+TGG - chr5_1:5404422-5404441 None:intergenic 45.0%
! TCTTCCACACTTTGTTGGCT+TGG - chr5_1:5404481-5404500 None:intergenic 45.0%
GTAGGAGAAGCAAGGATATC+AGG + chr5_1:5404514-5404533 Msa0713280:CDS 45.0%
! CAATGGTGGAACAAGCTCAT+TGG + chr5_1:5404546-5404565 Msa0713280:CDS 45.0%
!! AAAAATAAAAAATAAAAACA+AGG - chr5_1:5400567-5400586 None:intergenic 5.0%
!! CTGGAAACTTTGGAGTGGCT+AGG + chr5_1:5400294-5400313 Msa0713280:CDS 50.0%
GGTATCAGTTAGCTAGGTGG+TGG + chr5_1:5400665-5400684 Msa0713280:intron 50.0%
!! AGTTAGCTAGGTGGTGGGTT+GGG + chr5_1:5400671-5400690 Msa0713280:intron 50.0%
TGGGGAAGAGAGTGAGACTA+GGG + chr5_1:5400750-5400769 Msa0713280:intron 50.0%
! GTGGTTTCTAGGCAAGTGTC+CGG + chr5_1:5400859-5400878 Msa0713280:intron 50.0%
!! GACCTAGTAGGGTTTTGTGG+TGG + chr5_1:5400931-5400950 Msa0713280:intron 50.0%
AGGAAATGACAGCTAGGAGG+GGG - chr5_1:5401006-5401025 None:intergenic 50.0%
! GCCTTGACGTGTGTTCCTTT+TGG + chr5_1:5401120-5401139 Msa0713280:intron 50.0%
CCCAAAAGGAACACACGTCA+AGG - chr5_1:5401124-5401143 None:intergenic 50.0%
ATTGTCCTGGAGTATGCTGC+TGG + chr5_1:5401709-5401728 Msa0713280:CDS 50.0%
TTTGACAGGATAGCCTCTGC+TGG + chr5_1:5401742-5401761 Msa0713280:CDS 50.0%
! TGGTCGACTCAGTGAAGATG+AGG + chr5_1:5401762-5401781 Msa0713280:CDS 50.0%
!! CTGTTGATTTGGGCTGAGAG+TGG - chr5_1:5402428-5402447 None:intergenic 50.0%
CATAGCCACTGTCGGGTATT+TGG - chr5_1:5402823-5402842 None:intergenic 50.0%
CAAATACCCGACAGTGGCTA+TGG + chr5_1:5402821-5402840 Msa0713280:intron 50.0%
ACAACACCATAGCCACTGTC+GGG - chr5_1:5402830-5402849 None:intergenic 50.0%
! TCGGTTCCTCTAGAAGCTGT+CGG - chr5_1:5402918-5402937 None:intergenic 50.0%
CCGAATCACATCGGAATGAG+AGG + chr5_1:5402934-5402953 Msa0713280:intron 50.0%
TGACCTACCGAGAAGTTTCC+CGG + chr5_1:5403123-5403142 Msa0713280:intron 50.0%
TTACCGGGAAACTTCTCGGT+AGG - chr5_1:5403129-5403148 None:intergenic 50.0%
ACGCTTACCGGGAAACTTCT+CGG - chr5_1:5403133-5403152 None:intergenic 50.0%
CACGCTGAAAAGACTCGTGT+TGG + chr5_1:5403169-5403188 Msa0713280:intron 50.0%
!! TGTTGGTTTGTGGGGTCAGT+CGG + chr5_1:5403186-5403205 Msa0713280:intron 50.0%
GGCTATCCTGAAAGCAGTCT+GGG + chr5_1:5403207-5403226 Msa0713280:intron 50.0%
CATGCCCAGAGAGATAGTTG+AGG + chr5_1:5404414-5404433 Msa0713280:CDS 50.0%
GAAGAAATCATGCGGGTCGT+AGG + chr5_1:5404496-5404515 Msa0713280:CDS 50.0%
AGAAGCAAGGATATCAGGGC+TGG + chr5_1:5404519-5404538 Msa0713280:CDS 50.0%
TCAGGGCTGGAAAACAATGG+TGG + chr5_1:5404532-5404551 Msa0713280:CDS 50.0%
!! CAGTTAGCTAGGTGGTGGGT+TGG + chr5_1:5400670-5400689 Msa0713280:intron 55.0%
GGGTTGGGTGTTTGTGTCTC+CGG + chr5_1:5400686-5400705 Msa0713280:intron 55.0%
GTGGGGAAGAGAGTGAGACT+AGG + chr5_1:5400749-5400768 Msa0713280:intron 55.0%
GGAAATGACAGCTAGGAGGG+GGG - chr5_1:5401005-5401024 None:intergenic 55.0%
!!! GGTGGGTTGTTTTCCTGTGG+TGG + chr5_1:5401058-5401077 Msa0713280:intron 55.0%
!!! CGTGTGTTCCTTTTGGGGTG+CGG + chr5_1:5401127-5401146 Msa0713280:intron 55.0%
TTCACTGAGTCGACCAGCAG+AGG - chr5_1:5401758-5401777 None:intergenic 55.0%
TGTAACACCCAAGGCTGACG+AGG + chr5_1:5402847-5402866 Msa0713280:intron 55.0%
GTAACACCCAAGGCTGACGA+GGG + chr5_1:5402848-5402867 Msa0713280:intron 55.0%
! CGGTTCCTCTAGAAGCTGTC+GGG - chr5_1:5402917-5402936 None:intergenic 55.0%
TCGGAATGAGAGGGATCCTG+AGG + chr5_1:5402944-5402963 Msa0713280:intron 55.0%
TCTCATACCTACACGGCCTC+AGG - chr5_1:5402963-5402982 None:intergenic 55.0%
CGGCTATCCTGAAAGCAGTC+TGG + chr5_1:5403206-5403225 Msa0713280:intron 55.0%
TTGTGGTGGTAGACGCCCTG+CGG + chr5_1:5400945-5400964 Msa0713280:intron 60.0%
GTAGACGCCCTGCGGTTGTT+CGG + chr5_1:5400953-5400972 Msa0713280:intron 60.0%
TAGACGCCCTGCGGTTGTTC+GGG + chr5_1:5400954-5400973 Msa0713280:intron 60.0%
ACACAAGGCCGCACCCCAAA+AGG - chr5_1:5401138-5401157 None:intergenic 60.0%
GTCCTGGAGTATGCTGCTGG+TGG + chr5_1:5401712-5401731 Msa0713280:CDS 60.0%
CACCACCAGCAGCATACTCC+AGG - chr5_1:5401717-5401736 None:intergenic 60.0%
CATTGTCGTGCCTTGCGCAC+CGG - chr5_1:5402887-5402906 None:intergenic 60.0%
GCGCAAGGCACGACAATGAG+CGG + chr5_1:5402889-5402908 Msa0713280:intron 60.0%
TCCTCACTCGCACGCTTACC+GGG - chr5_1:5403144-5403163 None:intergenic 60.0%
GTCCTCACTCGCACGCTTAC+CGG - chr5_1:5403145-5403164 None:intergenic 60.0%
TGCGGGTCGTAGGAGAAGCA+AGG + chr5_1:5404506-5404525 Msa0713280:CDS 60.0%
AGACGCCCTGCGGTTGTTCG+GGG + chr5_1:5400955-5400974 Msa0713280:intron 65.0%
ACACCCAAGGCTGACGAGGG+CGG + chr5_1:5402851-5402870 Msa0713280:intron 65.0%
CGGCTCCCGACAGCTTCTAG+AGG + chr5_1:5402909-5402928 Msa0713280:intron 65.0%
GAGGGATCCTGAGGCCGTGT+AGG + chr5_1:5402953-5402972 Msa0713280:intron 65.0%
TCCCGGTAAGCGTGCGAGTG+AGG + chr5_1:5403140-5403159 Msa0713280:intron 65.0%
TCGGGCGCAGTCGTGCTTGT+TGG + chr5_1:5403941-5403960 Msa0713280:intron 65.0%
GACGCCCTGCGGTTGTTCGG+GGG + chr5_1:5400956-5400975 Msa0713280:intron 70.0%
ACGCCCTGCGGTTGTTCGGG+GGG + chr5_1:5400957-5400976 Msa0713280:intron 70.0%
CACCCAAGGCTGACGAGGGC+GGG + chr5_1:5402852-5402871 Msa0713280:intron 70.0%
ACCCAAGGCTGACGAGGGCG+GGG + chr5_1:5402853-5402872 Msa0713280:intron 70.0%
TCCCCGCCCTCGTCAGCCTT+GGG - chr5_1:5402857-5402876 None:intergenic 70.0%
CGCCCTGCGGTTGTTCGGGG+GGG + chr5_1:5400958-5400977 Msa0713280:intron 75.0%
GCCCTGCGGTTGTTCGGGGG+GGG + chr5_1:5400959-5400978 Msa0713280:intron 75.0%
CCCCCCCCCGAACAACCGCA+GGG - chr5_1:5400963-5400982 None:intergenic 75.0%
CCCTGCGGTTGTTCGGGGGG+GGG + chr5_1:5400960-5400979 Msa0713280:intron 75.0%
CCTGCGGTTGTTCGGGGGGG+GGG + chr5_1:5400961-5400980 Msa0713280:intron 75.0%
CTGCGGTTGTTCGGGGGGGG+GGG + chr5_1:5400962-5400981 Msa0713280:intron 75.0%
TGCGGTTGTTCGGGGGGGGG+GGG + chr5_1:5400963-5400982 Msa0713280:intron 75.0%
CTCCCCGCCCTCGTCAGCCT+TGG - chr5_1:5402858-5402877 None:intergenic 75.0%
AGGCTGACGAGGGCGGGGAG+TGG + chr5_1:5402858-5402877 Msa0713280:intron 75.0%
GGAGTGGTCGCCGGTGCGCA+AGG + chr5_1:5402874-5402893 Msa0713280:intron 75.0%
! CCCCCCCCCCGAACAACCGC+AGG - chr5_1:5400964-5400983 None:intergenic 80.0%
! GCGGTTGTTCGGGGGGGGGG+GGG + chr5_1:5400964-5400983 Msa0713280:intron 80.0%
! CGGTTGTTCGGGGGGGGGGG+GGG + chr5_1:5400965-5400984 Msa0713280:intron 80.0%
! GGTTGTTCGGGGGGGGGGGG+GGG + chr5_1:5400966-5400985 Msa0713280:intron 80.0%
! GTTGTTCGGGGGGGGGGGGG+GGG + chr5_1:5400967-5400986 Msa0713280:intron 80.0%
! TTGTTCGGGGGGGGGGGGGG+GGG + chr5_1:5400968-5400987 Msa0713280:intron 80.0%
! CGAGGGCGGGGAGTGGTCGC+CGG + chr5_1:5402865-5402884 Msa0713280:intron 80.0%
! TGTTCGGGGGGGGGGGGGGG+GGG + chr5_1:5400969-5400988 Msa0713280:intron 85.0%
! GTTCGGGGGGGGGGGGGGGG+GGG + chr5_1:5400970-5400989 Msa0713280:intron 90.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 5400254 5404642 5400254 ID=Msa0713280;Name=Msa0713280
chr5_1 mRNA 5400254 5404642 5400254 ID=Msa0713280-mRNA-1;Parent=Msa0713280;Name=Msa0713280-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|0.8|1|6|0|255
chr5_1 exon 5400254 5400379 5400254 ID=Msa0713280-mRNA-1:exon:2385;Parent=Msa0713280-mRNA-1
chr5_1 exon 5401528 5401602 5401528 ID=Msa0713280-mRNA-1:exon:2386;Parent=Msa0713280-mRNA-1
chr5_1 exon 5401682 5401786 5401682 ID=Msa0713280-mRNA-1:exon:2387;Parent=Msa0713280-mRNA-1
chr5_1 exon 5402223 5402315 5402223 ID=Msa0713280-mRNA-1:exon:2388;Parent=Msa0713280-mRNA-1
chr5_1 exon 5402414 5402506 5402414 ID=Msa0713280-mRNA-1:exon:2389;Parent=Msa0713280-mRNA-1
chr5_1 exon 5404367 5404642 5404367 ID=Msa0713280-mRNA-1:exon:2390;Parent=Msa0713280-mRNA-1
chr5_1 CDS 5400254 5400379 5400254 ID=Msa0713280-mRNA-1:cds;Parent=Msa0713280-mRNA-1
chr5_1 CDS 5401528 5401602 5401528 ID=Msa0713280-mRNA-1:cds;Parent=Msa0713280-mRNA-1
chr5_1 CDS 5401682 5401786 5401682 ID=Msa0713280-mRNA-1:cds;Parent=Msa0713280-mRNA-1
chr5_1 CDS 5402223 5402315 5402223 ID=Msa0713280-mRNA-1:cds;Parent=Msa0713280-mRNA-1
chr5_1 CDS 5402414 5402506 5402414 ID=Msa0713280-mRNA-1:cds;Parent=Msa0713280-mRNA-1
chr5_1 CDS 5404367 5404642 5404367 ID=Msa0713280-mRNA-1:cds;Parent=Msa0713280-mRNA-1
Gene Sequence

>Msa0713280

ATGGAGGAGGAAAGATACGAGATATTGAAGGACCTTGGTTCTGGAAACTTTGGAGTGGCTAGGTTGGCTAAAGACAAGAAGACAGGAGAACTTGTTGCTATCAAATACATTGAAAGAGGATATAAGATTGATGAGAATGTTCAAAGGGAGATAGTTAACCATCGATCTTTAAGGCATCCAAATATTATCAGGTTCAAAGAGGTATTTGTGACACCTACTCATTTGGCTATTGTCCTGGAGTATGCTGCTGGTGGTGAACTTTTTGACAGGATAGCCTCTGCTGGTCGACTCAGTGAAGATGAGGTTGAAATTTGTCATAGAGATCTGAAATTGGAGAACACTTTATTGGATGGAAGTCCAGCTCCTCGAGTTAAAATTTGTGACTTTGGTTTCTCCAAGTCGTCTTTACTCCACTCTCAGCCCAAATCAACAGTTGGAACTCCTGCATATATTGCACCAGAGGTTTTGTCTAGAAGAGAGTATGATGGGAAGAGGATCACAATCTCAGAGATAAGACAACACCCTTGGTTTTGGAAGAACATGCCCAGAGAGATAGTTGAGGCTCAAAGAAAAGGTTACAATGAAATACAGATAGACCAATTACCAAGCCAACAAAGTGTGGAAGAAATCATGCGGGTCGTAGGAGAAGCAAGGATATCAGGGCTGGAAAACAATGGTGGAACAAGCTCATTGGGTGTTAACGTTGTTAAATGGATTGAAGAGGAAGTTGATGGTAGTGATGACTTTGTCCAAGTCCAACTTAATTAA
Protein sequence

>Msa0713280

MEEERYEILKDLGSGNFGVARLAKDKKTGELVAIKYIERGYKIDENVQREIVNHRSLRHPNIIRFKEVFVTPTHLAIVLEYAAGGELFDRIASAGRLSEDEVEICHRDLKLENTLLDGSPAPRVKICDFGFSKSSLLHSQPKSTVGTPAYIAPEVLSRREYDGKRITISEIRQHPWFWKNMPREIVEAQRKGYNEIQIDQLPSQQSVEEIMRVVGEARISGLENNGGTSSLGVNVVKWIEEEVDGSDDFVQVQLN*