AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0714690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0714690 MtrunA17_Chr5g0401921 93.511 863 13 1 1 820 1 863 0.0 1645
Msa0714690 MtrunA17_Chr1g0194631 46.196 736 297 12 147 818 55 755 0.0 618
Msa0714690 MtrunA17_Chr7g0235081 48.711 349 123 10 520 819 4 345 1.53e-92 294
Msa0714690 MtrunA17_Chr7g0270001 50.752 266 84 4 599 818 32 296 7.97e-79 256
Msa0714690 MtrunA17_Chr7g0235091 36.041 197 104 3 145 341 53 227 2.48e-33 131
Msa0714690 MtrunA17_Chr7g0270011 40.496 121 67 1 218 338 66 181 7.72e-27 112
Msa0714690 MtrunA17_Chr7g0270011 46.053 76 39 1 481 554 211 286 4.68e-11 65.1
Msa0714690 MtrunA17_Chr2g0297191 48.214 56 29 0 732 787 1095 1150 4.36e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0714690 AT2G23380.1 57.190 911 265 15 15 820 12 902 0.0 916
Msa0714690 AT2G23380.2 57.732 679 172 12 247 820 7 675 0.0 692
Msa0714690 AT4G02020.1 43.155 862 360 20 42 818 36 852 0.0 594
Msa0714690 AT4G02020.4 41.220 803 344 19 42 759 36 795 3.03e-170 513
Msa0714690 AT4G02020.3 42.077 732 339 18 42 731 36 724 1.05e-159 485
Msa0714690 AT4G02020.2 42.077 732 339 18 42 731 36 724 1.05e-159 485
Msa0714690 AT1G02580.1 41.351 370 152 11 487 806 326 680 7.96e-82 276
Msa0714690 AT1G02580.1 27.729 339 202 13 42 360 17 332 1.19e-14 78.6
Msa0714690 AT1G02580.2 45.968 248 115 8 487 729 326 559 2.80e-62 221
Msa0714690 AT1G02580.2 29.682 283 163 11 42 307 17 280 1.08e-14 78.6
Msa0714690 AT5G42400.7 44.000 75 40 1 732 804 1312 1386 6.13e-12 70.1
Msa0714690 AT5G42400.2 44.000 75 40 1 732 804 1312 1386 6.13e-12 70.1
Msa0714690 AT5G42400.8 44.000 75 40 1 732 804 1312 1386 6.13e-12 70.1
Msa0714690 AT5G42400.5 44.000 75 40 1 732 804 1312 1386 6.13e-12 70.1
Msa0714690 AT5G42400.4 44.000 75 40 1 732 804 1312 1386 6.13e-12 70.1
Msa0714690 AT5G42400.1 44.000 75 40 1 732 804 1312 1386 6.13e-12 70.1
Msa0714690 AT5G42400.3 44.000 75 40 1 732 804 1312 1386 6.13e-12 70.1
Msa0714690 AT5G42400.6 44.000 75 40 1 732 804 1312 1386 6.13e-12 70.1

Find 227 sgRNAs with CRISPR-Local

Find 1053 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGAAAAGAATCGTCAATT+TGG 0.146446 5_1:-7446902 None:intergenic
CTCATTCCCCTTCGGGAAAA+AGG 0.162584 5_1:-7454809 None:intergenic
TCTTGGAAAACTCTTGAAAA+AGG 0.182538 5_1:+7447973 Msa0714690:CDS
CTTAAAATGGCAGGTTATTA+TGG 0.213950 5_1:+7454376 Msa0714690:intron
AGCATGACTATCAGAGAATT+TGG 0.217139 5_1:+7446575 Msa0714690:intron
AATACCTTCGCGTAACAATT+TGG 0.232791 5_1:-7454275 None:intergenic
TTACATTTAAACATTCATTT+TGG 0.241243 5_1:+7454731 Msa0714690:three_prime_UTR
TTTACTTCAGGTAATTTAAT+AGG 0.247061 5_1:-7442610 None:intergenic
CTTACCGTTCGGAAACAATT+TGG 0.259143 5_1:-7447240 None:intergenic
CACGACATCGGCGACAAAAT+AGG 0.286588 5_1:-7446962 None:intergenic
GAGTGTCCTTGTCTTCTAAA+TGG 0.291259 5_1:+7451276 Msa0714690:CDS
TGACCGCTCATTGAATGATA+TGG 0.293019 5_1:+7447855 Msa0714690:CDS
ATATGCCTTCAGGTTCTTCT+TGG 0.300169 5_1:+7453832 Msa0714690:intron
CGAATTTATTATGATCAAAA+TGG 0.303568 5_1:+7445676 Msa0714690:CDS
GCATTTGCTCATTCCCCTTC+GGG 0.304981 5_1:-7454816 None:intergenic
TTAAGAGATTCCTGGCTATT+AGG 0.306752 5_1:-7450866 None:intergenic
GGTTCTACGGCAGTACTTCT+AGG 0.311438 5_1:+7442556 Msa0714690:CDS
CAGAAAAGAATCGTCAATTT+GGG 0.315964 5_1:-7446901 None:intergenic
CTCTCAGGATCTTGTCTTCC+CGG 0.320449 5_1:+7447096 Msa0714690:CDS
AAAATTATCGAAACCCGATT+TGG 0.327010 5_1:-7441124 None:intergenic
CCTGGACGGGATGCTGCTTC+AGG 0.332402 5_1:+7447525 Msa0714690:CDS
AAGCATTTCAAAACAAGAAT+TGG 0.346654 5_1:+7447939 Msa0714690:CDS
GACGGTCTGATGTGTCTGGC+TGG 0.348610 5_1:+7453854 Msa0714690:CDS
TTGCTATAACTAACCAGATA+TGG 0.351637 5_1:+7442380 Msa0714690:CDS
TGGCAGGTTATTATGGTTGA+TGG 0.362435 5_1:+7454383 Msa0714690:intron
AGCTGTGGCGATGGCACTCT+TGG 0.363331 5_1:+7452499 Msa0714690:CDS
CCGCCGACGATTTCCATATC+TGG 0.367263 5_1:-7442393 None:intergenic
TGGCTGGGGAGCCTTCTTAA+AGG 0.368220 5_1:+7453870 Msa0714690:CDS
ATGATAGGCAGCAGATTTCC+AGG 0.368503 5_1:-7451169 None:intergenic
CCGATTCCGCATTTCCAAAT+CGG 0.368856 5_1:+7441110 Msa0714690:five_prime_UTR
ATAGCCAGGAATCTCTTAAA+TGG 0.370443 5_1:+7450870 Msa0714690:CDS
TGGTTTATCTGATGTTGTTT+TGG 0.372618 5_1:+7446595 Msa0714690:CDS
CCTCTGGTGGTGCTCTATCT+AGG 0.374491 5_1:+7447403 Msa0714690:CDS
GGGAAGTTGTCTGGTTCTAC+TGG 0.374845 5_1:+7450939 Msa0714690:CDS
CTTCTTCACAATTTATGTAC+TGG 0.376007 5_1:-7450917 None:intergenic
CCGATTTGGAAATGCGGAAT+CGG 0.380349 5_1:-7441110 None:intergenic
ACAGAGGATCAATCAGTATT+AGG 0.386098 5_1:+7445646 Msa0714690:CDS
GGGGAGAGCAATGGTTATAA+TGG 0.386785 5_1:+7442523 Msa0714690:CDS
TGCATTTGCTCATTCCCCTT+CGG 0.391236 5_1:-7454817 None:intergenic
CGATTCCGCATTTCCAAATC+GGG 0.392468 5_1:+7441111 Msa0714690:five_prime_UTR
TTCTTTGCACGACCACTTGA+AGG 0.396983 5_1:-7454548 None:intergenic
TAGACCATTTAAGAGATTCC+TGG 0.401226 5_1:-7450874 None:intergenic
GAAACGAATTGTTACGGTTA+AGG 0.404174 5_1:+7442213 Msa0714690:CDS
ATCGAGCGGAGGGTCGGATC+TGG 0.410192 5_1:-7441213 None:intergenic
CATGGTACATCTTCAGTGTT+AGG 0.412969 5_1:-7447213 None:intergenic
CCAGTGGGGAAAAGTGGAAT+TGG 0.416857 5_1:+7447576 Msa0714690:CDS
TTATGGTTGATGGAGATCAT+AGG 0.420973 5_1:+7454393 Msa0714690:CDS
ATAAGCTTGTAATATCCATC+TGG 0.423255 5_1:-7454765 None:intergenic
GAAGACGGAGAAGGCGGAGG+CGG 0.423270 5_1:-7441185 None:intergenic
CCTATGCTGTAACAATTGTA+TGG 0.428403 5_1:-7454703 None:intergenic
AGCCCAAGCAGGAGCTCTAT+CGG 0.428962 5_1:-7454483 None:intergenic
GCTCTCCCCATCATCATTAC+CGG 0.429977 5_1:-7442509 None:intergenic
GAAGCAATTGACATGCATAA+TGG 0.434157 5_1:+7442478 Msa0714690:CDS
CTGCTGCCTATCATTCAATC+AGG 0.434225 5_1:+7451178 Msa0714690:CDS
AATTGGCTGATAATAAATCT+TGG 0.434669 5_1:+7447956 Msa0714690:CDS
AGCCCGATAGAGCTCCTGCT+TGG 0.435131 5_1:+7454480 Msa0714690:CDS
ACTCCTTTCCACAAGCTGAT+TGG 0.436728 5_1:-7451257 None:intergenic
TTTGGTAAATACCTTTAAGA+AGG 0.436866 5_1:-7453881 None:intergenic
TTCTAGTTTGCATGCAGAAA+CGG 0.439068 5_1:+7447631 Msa0714690:CDS
TGTGAAGAAGGGAAGTTGTC+TGG 0.440207 5_1:+7450930 Msa0714690:CDS
TTAAAGAATACCTAAAAGAA+TGG 0.440665 5_1:-7454607 None:intergenic
TTCTAGAAAAGCACTGAGCC+AGG 0.444807 5_1:-7446622 None:intergenic
GATTGCCTCCTTACACTACA+TGG 0.447081 5_1:+7442635 Msa0714690:CDS
TTCGCGTAACAATTTGGAAC+AGG 0.451100 5_1:-7454269 None:intergenic
GAAAAGGATTACAGAGAGAA+AGG 0.452779 5_1:+7451200 Msa0714690:CDS
AATTTGTTGGGTAAAGTGAC+AGG 0.452987 5_1:-7440955 None:intergenic
ACGGTCTGATGTGTCTGGCT+GGG 0.459402 5_1:+7453855 Msa0714690:CDS
GCTGTGGCGATGGCACTCTT+GGG 0.460661 5_1:+7452500 Msa0714690:CDS
CAGATGTTTGTAGGAACTGT+TGG 0.461588 5_1:+7451613 Msa0714690:CDS
GGTAAAGTGACAGGGAATGC+GGG 0.462853 5_1:-7440946 None:intergenic
CAACAGTTCCTACAAACATC+TGG 0.464408 5_1:-7451612 None:intergenic
CGGTCTGATGTGTCTGGCTG+GGG 0.465379 5_1:+7453856 Msa0714690:CDS
ACATGGATTGTACTGTCGGC+AGG 0.466976 5_1:-7451229 None:intergenic
GCCCAAGCAGGAGCTCTATC+GGG 0.467735 5_1:-7454482 None:intergenic
CTTGGACGGTCTGATGTGTC+TGG 0.470501 5_1:+7453850 Msa0714690:CDS
CAGATTACATGGATGCTCTC+AGG 0.470637 5_1:+7447081 Msa0714690:CDS
AATGTGATCCAGATGTTTGT+AGG 0.470951 5_1:+7451604 Msa0714690:CDS
AGGAAAATCCATGTAGTGTA+AGG 0.470987 5_1:-7442643 None:intergenic
GTCTGGATTTGCTGAGTAAG+AGG 0.471656 5_1:+7442449 Msa0714690:CDS
CCTATCATTCAATCAGGAAA+AGG 0.472188 5_1:+7451184 Msa0714690:CDS
ATTGCAGCTGCCTAATAGCC+AGG 0.472413 5_1:+7450856 Msa0714690:intron
GCCTTCAGGTTCTTCTTGGA+CGG 0.474437 5_1:+7453836 Msa0714690:intron
GCAATTGAATCTGCATGAAT+CGG 0.475579 5_1:+7441079 Msa0714690:five_prime_UTR
CAGTACATAAATTGTGAAGA+AGG 0.479210 5_1:+7450918 Msa0714690:CDS
TAAATGGTCTAAAGACATGT+TGG 0.479310 5_1:+7450886 Msa0714690:CDS
GTTCTTGATGCTTATCGAAA+GGG 0.482842 5_1:+7454218 Msa0714690:CDS
GAAGAAGACGGAGAAGGCGG+AGG 0.483507 5_1:-7441188 None:intergenic
ACTAAACCAGTGGGGAAAAG+TGG 0.485809 5_1:+7447570 Msa0714690:CDS
GCCCGATAGAGCTCCTGCTT+GGG 0.486279 5_1:+7454481 Msa0714690:CDS
AGTGACTCAGAGAATGGTCC+TGG 0.487064 5_1:+7447507 Msa0714690:CDS
CACGAGGAAAGAAGAATTTG+TGG 0.489043 5_1:+7447912 Msa0714690:CDS
GTCCATGCTTTGCTGCAGAT+AGG 0.489705 5_1:+7451580 Msa0714690:CDS
GTAATAATGAAGTGAGAAGA+AGG 0.492938 5_1:+7451100 Msa0714690:CDS
ATTCTTTAATCAACACATAG+AGG 0.494872 5_1:+7454621 Msa0714690:three_prime_UTR
TCCATGCTTTGCTGCAGATA+GGG 0.497600 5_1:+7451581 Msa0714690:CDS
TAATTATCCCCTCTTTGACT+AGG 0.498579 5_1:-7452526 None:intergenic
AGGCTGAGAGGCAACCTTTG+TGG 0.498683 5_1:+7447184 Msa0714690:intron
AAATGGTCTAAAGACATGTT+GGG 0.502582 5_1:+7450887 Msa0714690:CDS
TTTGTAGGAACTGTTGGGTC+AGG 0.504264 5_1:+7451619 Msa0714690:CDS
GTTCGTGCCGGTAATGATGA+TGG 0.504381 5_1:+7442502 Msa0714690:CDS
ATATCATTCAATGAGCGGTC+AGG 0.505398 5_1:-7447853 None:intergenic
TATGGTTGATGGAGATCATA+GGG 0.508403 5_1:+7454394 Msa0714690:CDS
CGGAAACAATTTGGCCCACA+TGG 0.509205 5_1:-7447231 None:intergenic
TGCAGTTAAAGACGTGTTAG+CGG 0.509423 5_1:+7442159 Msa0714690:CDS
TCTTCTCAAACAGCAGCAAA+AGG 0.513002 5_1:+7452570 Msa0714690:CDS
ACGGCAAAACGAACCTGTCC+AGG 0.514432 5_1:-7442663 None:intergenic
TTCGTGCCGGTAATGATGAT+GGG 0.514702 5_1:+7442503 Msa0714690:CDS
TGCCGATACAGATAGAGGTC+TGG 0.518433 5_1:+7442432 Msa0714690:CDS
TAGATGAAGCACTTTCACTT+TGG 0.519134 5_1:-7447461 None:intergenic
AGATGTTTGTAGGAACTGTT+GGG 0.521591 5_1:+7451614 Msa0714690:CDS
GCTAAGGAACGGATTAATGC+TGG 0.522196 5_1:+7454428 Msa0714690:CDS
GGAAGTTGTCTGGTTCTACT+GGG 0.522601 5_1:+7450940 Msa0714690:CDS
TCTGGCTTTCGAGCCCAAGC+AGG 0.523287 5_1:-7454494 None:intergenic
CCTGAAGCAGCATCCCGTCC+AGG 0.528406 5_1:-7447525 None:intergenic
TGGAGATGACCATGGTTCTA+CGG 0.533083 5_1:+7442543 Msa0714690:CDS
GCTCGAAAGCCAGATGCCCC+TGG 0.535983 5_1:+7454503 Msa0714690:CDS
GTCAAAGTCTTTATCTAAAG+CGG 0.536035 5_1:+7440989 Msa0714690:five_prime_UTR
CTCAGAGAATGGTCCTGGAC+GGG 0.536879 5_1:+7447512 Msa0714690:CDS
TGTTCTTGATGCTTATCGAA+AGG 0.537694 5_1:+7454217 Msa0714690:CDS
TGCTGCGAAACGAATTGTTA+CGG 0.538271 5_1:+7442207 Msa0714690:CDS
ATCCAGACCTCTATCTGTAT+CGG 0.545353 5_1:-7442434 None:intergenic
TCCCTATCTGCAGCAAAGCA+TGG 0.547017 5_1:-7451582 None:intergenic
ACCGTCATTGCCACCTACCA+TGG 0.547953 5_1:+7441151 Msa0714690:exon
ATCCACATGGATTGTACTGT+CGG 0.548401 5_1:-7451233 None:intergenic
AACAATTTGGAACAGGAGAG+TGG 0.550411 5_1:-7454262 None:intergenic
AGTCTGAGTAGATGTGACTT+TGG 0.553936 5_1:-7447364 None:intergenic
CTAAATTATTGTAGCAGCTG+TGG 0.554553 5_1:+7452484 Msa0714690:intron
TACAATGCAGACAAAGAAAG+TGG 0.557922 5_1:+7442123 Msa0714690:intron
GATGTTGAAGACAAATCCTC+TGG 0.558319 5_1:+7447387 Msa0714690:CDS
ATGCTGTAAAGAATGCTGTT+CGG 0.558439 5_1:+7442587 Msa0714690:CDS
TTGGGATTCCTAGTCAAAGA+GGG 0.559307 5_1:+7452518 Msa0714690:CDS
GAGAGTAGTGACTCAGAGAA+TGG 0.561640 5_1:+7447501 Msa0714690:CDS
TATTGTAGCAGCTGTGGCGA+TGG 0.563391 5_1:+7452490 Msa0714690:intron
AAAGTGCTTCATCTAATGCT+AGG 0.564163 5_1:+7447469 Msa0714690:CDS
CCCACAGTACTTCTCACAGC+AGG 0.565727 5_1:-7451301 None:intergenic
AGTACATAAATTGTGAAGAA+GGG 0.566712 5_1:+7450919 Msa0714690:CDS
TAGGAATATTTGCTAAGGAA+CGG 0.567191 5_1:+7454417 Msa0714690:CDS
GGGTAAAGTGACAGGGAATG+CGG 0.568637 5_1:-7440947 None:intergenic
CAGGTTCCATTTAGAAGACA+AGG 0.572098 5_1:-7451282 None:intergenic
TCCGTCGTTTAAAGTATACC+TGG 0.574401 5_1:+7451151 Msa0714690:CDS
GCTAACACGTCTTTAACTGC+AGG 0.577529 5_1:-7442157 None:intergenic
TCTTCCCCACTCGTAACATG+TGG 0.577728 5_1:-7447886 None:intergenic
TTGGCATTAGCTATCCCAGA+TGG 0.579037 5_1:+7454750 Msa0714690:three_prime_UTR
TAAGCTTGTAATATCCATCT+GGG 0.582572 5_1:-7454764 None:intergenic
GGAACTAATTGACGAAGAAG+AGG 0.585064 5_1:+7445732 Msa0714690:CDS
CATGGATTGTACTGTCGGCA+GGG 0.586600 5_1:-7451228 None:intergenic
AGGCGGAGAGTTTGACGCCA+TGG 0.588142 5_1:-7441168 None:intergenic
CTGGAAGAAGAAGACGGAGA+AGG 0.588519 5_1:-7441194 None:intergenic
CCATACAATTGTTACAGCAT+AGG 0.589378 5_1:+7454703 Msa0714690:three_prime_UTR
TCCAGGTATACTTTAAACGA+CGG 0.589735 5_1:-7451152 None:intergenic
TTCTTTAATCAACACATAGA+GGG 0.590352 5_1:+7454622 Msa0714690:three_prime_UTR
GGAAGGATCGAGCGGAGGGT+CGG 0.591513 5_1:-7441219 None:intergenic
CAAGCTGATTGGCATCCACA+TGG 0.591796 5_1:-7451246 None:intergenic
ATTTATTATGATCAAAATGG+TGG 0.591896 5_1:+7445679 Msa0714690:CDS
GCTACAAATTCTCTCGTGGA+AGG 0.592737 5_1:+7450966 Msa0714690:CDS
ATACGGAAGGATCGAGCGGA+GGG 0.592768 5_1:-7441223 None:intergenic
GAGTTTGACGCCATGGTAGG+TGG 0.592819 5_1:-7441161 None:intergenic
GTAAAGTGACAGGGAATGCG+GGG 0.594538 5_1:-7440945 None:intergenic
ATTTGTTGGGTAAAGTGACA+GGG 0.596066 5_1:-7440954 None:intergenic
CCACCTAAAACTAAACCAGT+GGG 0.597750 5_1:+7447561 Msa0714690:CDS
TGTTCCAAATTGTTACGCGA+AGG 0.599246 5_1:+7454271 Msa0714690:CDS
TCTGGAAAAGGATCTTGAAG+CGG 0.601715 5_1:+7446920 Msa0714690:CDS
CTGACCCACATGTTACGAGT+GGG 0.602989 5_1:+7447881 Msa0714690:CDS
TAGGGTAGGAATATTTGCTA+AGG 0.603131 5_1:+7454412 Msa0714690:CDS
GGAATAACAGAATAGAGTGA+AGG 0.603778 5_1:+7442339 Msa0714690:intron
GGAGAGTTTGACGCCATGGT+AGG 0.604407 5_1:-7441164 None:intergenic
AGCATGGACATTGACGACTT+CGG 0.607089 5_1:-7451566 None:intergenic
ATGCATAATGGTGTTCGTGC+CGG 0.607974 5_1:+7442490 Msa0714690:CDS
TCGTCGGCGGAGAGGACGTG+TGG 0.611446 5_1:+7442406 Msa0714690:CDS
ACTCAGAGAATGGTCCTGGA+CGG 0.611892 5_1:+7447511 Msa0714690:CDS
GGATGCTACAAATTCTCTCG+TGG 0.612099 5_1:+7450962 Msa0714690:CDS
GTTGATGGAGATCATAGGGT+AGG 0.614383 5_1:+7454398 Msa0714690:CDS
CTTGGGATTCCTAGTCAAAG+AGG 0.614392 5_1:+7452517 Msa0714690:CDS
GAGCTCTATCGGGCTCATAA+CGG 0.614475 5_1:-7454472 None:intergenic
TATGGAAATCGTCGGCGGAG+AGG 0.615136 5_1:+7442398 Msa0714690:CDS
AATGATGATGGGGAGAGCAA+TGG 0.615333 5_1:+7442514 Msa0714690:CDS
TGCCGACTTATAGGTACTCA+AGG 0.615787 5_1:+7447329 Msa0714690:intron
GGCATTGCCGATACAGATAG+AGG 0.618454 5_1:+7442427 Msa0714690:CDS
AGGATCAATCAGTATTAGGT+CGG 0.619655 5_1:+7445650 Msa0714690:CDS
GAAGAAGAAGACGGAGAAGG+CGG 0.621138 5_1:-7441191 None:intergenic
TGTGGATGCCAATCAGCTTG+TGG 0.621426 5_1:+7451249 Msa0714690:CDS
TCTCGTGGAAGGCTATTCCA+AGG 0.624684 5_1:+7450977 Msa0714690:CDS
GGAACGGATTAATGCTGGCG+AGG 0.624928 5_1:+7454433 Msa0714690:CDS
ATCAATCAGTATTAGGTCGG+AGG 0.625781 5_1:+7445653 Msa0714690:CDS
GAAGACGGTGCTCCTTCAAG+TGG 0.626003 5_1:+7454536 Msa0714690:CDS
CAATGAAGACAATAGTGGCG+AGG 0.626663 5_1:+7446848 Msa0714690:CDS
ATGCCAATCAGCTTGTGGAA+AGG 0.628895 5_1:+7451254 Msa0714690:CDS
TATACGGAAGGATCGAGCGG+AGG 0.630103 5_1:-7441224 None:intergenic
GCCATGGTAGGTGGCAATGA+CGG 0.630519 5_1:-7441152 None:intergenic
CCTAGATAGAGCACCACCAG+AGG 0.637499 5_1:-7447403 None:intergenic
AATGAGCAAATGCATATCAG+TGG 0.638778 5_1:+7454826 Msa0714690:three_prime_UTR
TGGGCCAAATTGTTTCCGAA+CGG 0.640317 5_1:+7447236 Msa0714690:CDS
GAAAGAATCTTACACGACAT+CGG 0.641819 5_1:-7446974 None:intergenic
CGAAACCCGATTTGGAAATG+CGG 0.642815 5_1:-7441116 None:intergenic
TCTGACCCACATGTTACGAG+TGG 0.642977 5_1:+7447880 Msa0714690:CDS
CCCACCTAAAACTAAACCAG+TGG 0.643501 5_1:+7447560 Msa0714690:CDS
TCGGATCTGGAAGAAGAAGA+CGG 0.647493 5_1:-7441200 None:intergenic
ATGGTAGGTGGCAATGACGG+TGG 0.647845 5_1:-7441149 None:intergenic
CAGAAATCAAAGAATGACAG+AGG 0.651131 5_1:+7445630 Msa0714690:intron
GTGTTAGGAGGAGTCCACAA+AGG 0.652487 5_1:-7447198 None:intergenic
AAACCATATCATTCAATGAG+CGG 0.654314 5_1:-7447858 None:intergenic
TATTTGCAGCGACAGTGAGG+AGG 0.654413 5_1:+7445711 Msa0714690:CDS
CTTCCCCACTCGTAACATGT+GGG 0.655437 5_1:-7447885 None:intergenic
AAAATCCATGTAGTGTAAGG+AGG 0.657023 5_1:-7442640 None:intergenic
GAAGTACTGCCGTAGAACCA+TGG 0.660327 5_1:-7442552 None:intergenic
GGTACATCTTCAGTGTTAGG+AGG 0.660539 5_1:-7447210 None:intergenic
TAACCAGATATGGAAATCGT+CGG 0.662231 5_1:+7442390 Msa0714690:CDS
TAAGAGAAACAGTAAGCGAG+TGG 0.662571 5_1:+7447599 Msa0714690:CDS
TGACCCACATGTTACGAGTG+GGG 0.665377 5_1:+7447882 Msa0714690:CDS
ACCTGCTGTGAGAAGTACTG+TGG 0.669440 5_1:+7451300 Msa0714690:CDS
CCTGCTGTGAGAAGTACTGT+GGG 0.671307 5_1:+7451301 Msa0714690:CDS
GGTTATAATGGAGATGACCA+TGG 0.672080 5_1:+7442535 Msa0714690:CDS
TAAAGTGACAGGGAATGCGG+GGG 0.672366 5_1:-7440944 None:intergenic
AATGCAGACAAAGAAAGTGG+AGG 0.674743 5_1:+7442126 Msa0714690:intron
CGAGTGGGGAAGACAACACG+AGG 0.677101 5_1:+7447896 Msa0714690:CDS
ACTTATTTGCAGCGACAGTG+AGG 0.677851 5_1:+7445708 Msa0714690:CDS
AACACTGAAGATGTACCATG+TGG 0.679817 5_1:+7447216 Msa0714690:CDS
TGGGATTCCTAGTCAAAGAG+GGG 0.679854 5_1:+7452519 Msa0714690:CDS
TGCCGACAGTACAATCCATG+TGG 0.680454 5_1:+7451231 Msa0714690:CDS
AAGTATACGGAAGGATCGAG+CGG 0.688156 5_1:-7441227 None:intergenic
TCGTGCCGGTAATGATGATG+GGG 0.694352 5_1:+7442504 Msa0714690:CDS
TGGTTCATGAATAGGCTGAG+AGG 0.694664 5_1:+7447172 Msa0714690:intron
CCAGATATGGAAATCGTCGG+CGG 0.697154 5_1:+7442393 Msa0714690:CDS
GAAGTTGTCTGGTTCTACTG+GGG 0.701883 5_1:+7450941 Msa0714690:CDS
ACACTGAAGATGTACCATGT+GGG 0.703901 5_1:+7447217 Msa0714690:CDS
GTTGAAGACAAATCCTCTGG+TGG 0.718221 5_1:+7447390 Msa0714690:CDS
CACCTAAAACTAAACCAGTG+GGG 0.751699 5_1:+7447562 Msa0714690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATATATATATTTTTTA+AGG + chr5_1:7441025-7441044 Msa0714690:five_prime_UTR 0.0%
!! ATTATTAAAAAAAAAAAAAT+AGG - chr5_1:7441284-7441303 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr5_1:7449578-7449597 Msa0714690:intron 0.0%
!! TAAATTTATATGAAAATATG+TGG + chr5_1:7446333-7446352 Msa0714690:intron 10.0%
!!! CAATTTTTTTTTATAGTTTT+TGG + chr5_1:7449761-7449780 Msa0714690:intron 10.0%
!!! CAATTTTTTTTTATAGTTTT+TGG - chr5_1:7449761-7449780 None:intergenic 10.0%
!!! CAAAAAAAATTTATAGTTTT+TGG - chr5_1:7450139-7450158 None:intergenic 10.0%
!!! AATTTTAGTAGTATAAAAAT+AGG + chr5_1:7453580-7453599 Msa0714690:intron 10.0%
!! AACATGTATTTAATTATTAT+CGG + chr5_1:7453656-7453675 Msa0714690:intron 10.0%
!! TTCAAAAATAAAAGTTATCT+AGG + chr5_1:7441863-7441882 Msa0714690:intron 15.0%
!! ATTATAATTTATAAGTGTGA+TGG + chr5_1:7442086-7442105 Msa0714690:intron 15.0%
!!! TATTATTTTTTAAGTCAATC+TGG + chr5_1:7443770-7443789 Msa0714690:intron 15.0%
!!! TAATATTTTTTAAGTCAATC+TGG + chr5_1:7443931-7443950 Msa0714690:intron 15.0%
!!! TAATATTTTTTAAGTCAATC+TGG + chr5_1:7443931-7443950 Msa0714690:intron 15.0%
!! GTTAAAAGAAATTACATAAA+GGG - chr5_1:7444483-7444502 None:intergenic 15.0%
!! TGTTAAAAGAAATTACATAA+AGG - chr5_1:7444484-7444503 None:intergenic 15.0%
!!! ATGTAATTTCTTTTAACAAA+TGG + chr5_1:7444486-7444505 Msa0714690:intron 15.0%
!! ATAAAAATGAAAGAAATCAA+AGG + chr5_1:7444600-7444619 Msa0714690:intron 15.0%
!!! ACTCTTATTTTATTTTATTG+TGG + chr5_1:7445516-7445535 Msa0714690:intron 15.0%
!! TTATATTCTCTATATAAAGA+AGG + chr5_1:7446177-7446196 Msa0714690:intron 15.0%
!!! TTTTCATATAAATTTAACCA+AGG - chr5_1:7446329-7446348 None:intergenic 15.0%
!!! TAATTGTTTCTTTATTATCT+TGG - chr5_1:7447742-7447761 None:intergenic 15.0%
!! TTAATATTAAAAGATCCAAA+AGG + chr5_1:7447789-7447808 Msa0714690:intron 15.0%
!! AGAATAAGATATTGAAAATA+TGG - chr5_1:7448304-7448323 None:intergenic 15.0%
!! TTATATATATATATTTGCAC+TGG + chr5_1:7448323-7448342 Msa0714690:intron 15.0%
!! TATATATATAGGCTAAAATA+TGG + chr5_1:7449603-7449622 Msa0714690:intron 15.0%
!! AAACTATAAAAAAATTTGCA+GGG - chr5_1:7449699-7449718 None:intergenic 15.0%
!! AAAACTATAAAAAAATTTGC+AGG - chr5_1:7449700-7449719 None:intergenic 15.0%
!!! GCAAATTTTTTTATAGTTTT+TGG + chr5_1:7449700-7449719 Msa0714690:intron 15.0%
!! AACTATAAAAAAAAATTGCA+GGG - chr5_1:7450080-7450099 None:intergenic 15.0%
!! AAACTATAAAAAAAAATTGC+AGG - chr5_1:7450079-7450098 None:intergenic 15.0%
!!! TATAAAAAAAAGTTTTTGCA+GGG - chr5_1:7449788-7449807 None:intergenic 15.0%
!! AAACTATAAAAAAAAATTGC+AGG + chr5_1:7450079-7450098 Msa0714690:intron 15.0%
!! AACTATAAAAAAAAATTGCA+GGG + chr5_1:7450080-7450099 Msa0714690:intron 15.0%
!!! AAACTATAAATTTTTTTTGC+AGG + chr5_1:7450140-7450159 Msa0714690:intron 15.0%
!!! AACTATAAATTTTTTTTGCA+GGG + chr5_1:7450141-7450160 Msa0714690:intron 15.0%
!! ATAAAAATCAGTTACTTATT+AGG - chr5_1:7450838-7450857 None:intergenic 15.0%
!! TAAATAGATATATTGTATTG+TGG + chr5_1:7451419-7451438 Msa0714690:intron 15.0%
!! AGGAAATGAAAAAAAATTAA+TGG - chr5_1:7452311-7452330 None:intergenic 15.0%
!! AATATGTTATCATCATTAAT+AGG - chr5_1:7452334-7452353 None:intergenic 15.0%
!! ATCATTAAAACCTATTATAA+CGG - chr5_1:7453296-7453315 None:intergenic 15.0%
!!! TATAATAGGTTTTAATGATA+TGG + chr5_1:7453297-7453316 Msa0714690:intron 15.0%
!!! ATAATAGGTTTTAATGATAT+GGG + chr5_1:7453298-7453317 Msa0714690:intron 15.0%
!!! AATTAAAAATCCATTCTTTT+AGG + chr5_1:7454597-7454616 Msa0714690:three_prime_UTR 15.0%
!!! TTACATTTAAACATTCATTT+TGG + chr5_1:7454731-7454750 Msa0714690:three_prime_UTR 15.0%
!!! ATAGTTATTTTATACACGAT+TGG - chr5_1:7441383-7441402 None:intergenic 20.0%
!!! ATTTTTTTAGCTACATTGTA+CGG + chr5_1:7441408-7441427 Msa0714690:intron 20.0%
!!! ATAAGTTTTGTGAGATTTTT+TGG - chr5_1:7441649-7441668 None:intergenic 20.0%
!!! GGTAAAAAATTAGATTTTCT+AGG + chr5_1:7441809-7441828 Msa0714690:intron 20.0%
!! TTAAAACTTGAAACAAAGAT+TGG + chr5_1:7441896-7441915 Msa0714690:intron 20.0%
!! AAACAAACTCTTACTTATTA+GGG + chr5_1:7441973-7441992 Msa0714690:intron 20.0%
!! TTTACTTCAGGTAATTTAAT+AGG - chr5_1:7442613-7442632 None:intergenic 20.0%
!! GTAAAGAAAAACATCAATTA+CGG - chr5_1:7442685-7442704 None:intergenic 20.0%
!! ATTATAAACTCAGTATTGTA+AGG + chr5_1:7442764-7442783 Msa0714690:intron 20.0%
!!! TATCAATATGTTTGTTTCTT+GGG - chr5_1:7443251-7443270 None:intergenic 20.0%
!! ACATATTGATAGAAAAGATA+AGG + chr5_1:7443260-7443279 Msa0714690:intron 20.0%
!!! ATGAAAAATATTGTTTTGAC+CGG - chr5_1:7443323-7443342 None:intergenic 20.0%
!!! TATTTTTCATACAGATAGTA+AGG + chr5_1:7443333-7443352 Msa0714690:intron 20.0%
!! ATACATCAAATCAAATCAAA+TGG - chr5_1:7443420-7443439 None:intergenic 20.0%
!!! GGTATTTTCTTTGAAATATA+AGG + chr5_1:7443632-7443651 Msa0714690:intron 20.0%
!! ATATATCATATTATCATCAG+AGG + chr5_1:7443880-7443899 Msa0714690:intron 20.0%
!! ATATATCATATTATCATCAG+AGG + chr5_1:7443880-7443899 Msa0714690:intron 20.0%
!!! TTTTCAGTGAAGAAATTTAA+GGG + chr5_1:7444117-7444136 Msa0714690:intron 20.0%
!!! AAAAAGTTTTTGATTGTTGT+TGG + chr5_1:7444443-7444462 Msa0714690:intron 20.0%
!!! TTACTTTTACCTATTTTTGA+TGG + chr5_1:7444691-7444710 Msa0714690:intron 20.0%
!!! TACTTTTACCTATTTTTGAT+GGG + chr5_1:7444692-7444711 Msa0714690:intron 20.0%
!!! TCTTTTTTTTCCAACTTAAA+GGG - chr5_1:7444790-7444809 None:intergenic 20.0%
!!! TTCTTTTTTTTCCAACTTAA+AGG - chr5_1:7444791-7444810 None:intergenic 20.0%
!!! TTTCAAGTTTTTAACTTTGT+TGG + chr5_1:7444832-7444851 Msa0714690:intron 20.0%
!!! TTCAAGTTTTTAACTTTGTT+GGG + chr5_1:7444833-7444852 Msa0714690:intron 20.0%
!!! ATTTCTTTAATTTGATTGCA+AGG + chr5_1:7445094-7445113 Msa0714690:intron 20.0%
!! AAAAATTAAGGTCCATATTA+GGG + chr5_1:7445454-7445473 Msa0714690:intron 20.0%
!! CGAATTTATTATGATCAAAA+TGG + chr5_1:7445676-7445695 Msa0714690:CDS 20.0%
!! ATTTATTATGATCAAAATGG+TGG + chr5_1:7445679-7445698 Msa0714690:CDS 20.0%
!!! AATCAGAAGATTTTATACTT+CGG + chr5_1:7445773-7445792 Msa0714690:CDS 20.0%
!! TTTATCATGAAATAAACACT+TGG - chr5_1:7448163-7448182 None:intergenic 20.0%
!!! AATTTTGTTGATTCAAATCT+CGG + chr5_1:7448658-7448677 Msa0714690:intron 20.0%
!!! AGAAAAAACCAGTTTTTAAT+TGG + chr5_1:7449227-7449246 Msa0714690:intron 20.0%
!!! CTATAAAAAAAAGTTTTTGC+AGG - chr5_1:7449789-7449808 None:intergenic 20.0%
!!! CAAAAACAAAATTTTTTGCA+GGG + chr5_1:7450051-7450070 Msa0714690:intron 20.0%
!! ACATATATATGGCTAAAATA+TGG - chr5_1:7450205-7450224 None:intergenic 20.0%
!! CCACAATATATACATATATA+TGG - chr5_1:7450216-7450235 None:intergenic 20.0%
!! CCATATATATGTATATATTG+TGG + chr5_1:7450213-7450232 Msa0714690:intron 20.0%
!!! TTTTGGTCAAATGAATATAA+GGG + chr5_1:7451078-7451097 Msa0714690:intron 20.0%
!!! CATTTGTTAGTTATATTCAT+TGG + chr5_1:7451688-7451707 Msa0714690:intron 20.0%
!!! CAATTATTTTCAAAAGAAAG+TGG + chr5_1:7451905-7451924 Msa0714690:intron 20.0%
!!! TTCTCTTTTATTACATGAAA+AGG - chr5_1:7452159-7452178 None:intergenic 20.0%
!! CTTAATATGATCTATTGAAT+TGG + chr5_1:7452255-7452274 Msa0714690:intron 20.0%
!! TGATAACATATTAAAGCTTT+AGG + chr5_1:7452342-7452361 Msa0714690:intron 20.0%
!!! TAAAGCTTTAGGAAAATATT+TGG + chr5_1:7452353-7452372 Msa0714690:intron 20.0%
!! AATGTTTCATTGACATATAA+AGG - chr5_1:7452410-7452429 None:intergenic 20.0%
!! TTTGATAAGAGTTAAAATTC+TGG - chr5_1:7452673-7452692 None:intergenic 20.0%
!!! ACCTATTTGTTTTATTTTTG+TGG + chr5_1:7452707-7452726 Msa0714690:intron 20.0%
!! TCCACAAAAATAAAACAAAT+AGG - chr5_1:7452711-7452730 None:intergenic 20.0%
!! AGACCTATAATTTATTATGA+CGG + chr5_1:7452759-7452778 Msa0714690:intron 20.0%
!! TCTCTACAAAAATTATATTG+TGG - chr5_1:7453025-7453044 None:intergenic 20.0%
!!! TAATTTTTGTAGAGAAAAGA+AGG + chr5_1:7453030-7453049 Msa0714690:intron 20.0%
!! TATTATGAATATGAGAGATT+TGG + chr5_1:7453253-7453272 Msa0714690:intron 20.0%
!! TCATTAAAACCTATTATAAC+GGG - chr5_1:7453295-7453314 None:intergenic 20.0%
!! TTGAAAATTTAAAAACTACG+AGG - chr5_1:7453451-7453470 None:intergenic 20.0%
!! ATATTCAAGATAATCAAAAC+CGG - chr5_1:7453742-7453761 None:intergenic 20.0%
!! AACAAATTGAATCATCAATT+TGG - chr5_1:7453902-7453921 None:intergenic 20.0%
!!! TTACTACCATAAATTTTTGT+TGG + chr5_1:7454133-7454152 Msa0714690:intron 20.0%
!! TTAAAGAATACCTAAAAGAA+TGG - chr5_1:7454610-7454629 None:intergenic 20.0%
!!! CTGTGTTGTTTTAATTTGTT+GGG - chr5_1:7440970-7440989 None:intergenic 25.0%
!!! ACTGTGTTGTTTTAATTTGT+TGG - chr5_1:7440971-7440990 None:intergenic 25.0%
!! AGGATTTTCAGAAATGAATT+AGG + chr5_1:7441045-7441064 Msa0714690:five_prime_UTR 25.0%
!! GGATTTTCAGAAATGAATTA+GGG + chr5_1:7441046-7441065 Msa0714690:five_prime_UTR 25.0%
!! AAAGAGAAAGAGAAAGTATA+CGG - chr5_1:7441243-7441262 None:intergenic 25.0%
! TAGAAATTAAAAACAGATCG+AGG - chr5_1:7441325-7441344 None:intergenic 25.0%
! TCAAATACGTCAATTCAAAT+AGG + chr5_1:7441683-7441702 Msa0714690:intron 25.0%
! CAAATACGTCAATTCAAATA+GGG + chr5_1:7441684-7441703 Msa0714690:intron 25.0%
! ATTCCTGGAAATATTATTAC+TGG - chr5_1:7441769-7441788 None:intergenic 25.0%
! TAATATTCTACTCACTTGTT+TGG + chr5_1:7441788-7441807 Msa0714690:intron 25.0%
! CAAACAAACTCTTACTTATT+AGG + chr5_1:7441972-7441991 Msa0714690:intron 25.0%
! AACAAACTCTTACTTATTAG+GGG + chr5_1:7441974-7441993 Msa0714690:intron 25.0%
!!! TTTGTTGTTGCTTTTGTATA+TGG + chr5_1:7442262-7442281 Msa0714690:intron 25.0%
!!! TTGTTGTTGCTTTTGTATAT+GGG + chr5_1:7442263-7442282 Msa0714690:intron 25.0%
!!! TAGTTTGTTATAACATGTTG+TGG + chr5_1:7442294-7442313 Msa0714690:intron 25.0%
! GTATTGTAGTTAATGTTAGA+TGG + chr5_1:7442726-7442745 Msa0714690:intron 25.0%
! TTTGAAAGGATGACTAATAT+GGG - chr5_1:7443045-7443064 None:intergenic 25.0%
! ATTTGAAAGGATGACTAATA+TGG - chr5_1:7443046-7443065 None:intergenic 25.0%
!! CTATCAATATGTTTGTTTCT+TGG - chr5_1:7443252-7443271 None:intergenic 25.0%
! AATCAAATGGCTATAATTTG+TGG - chr5_1:7443407-7443426 None:intergenic 25.0%
! GAAATAAAATGTTCAGTGAA+GGG - chr5_1:7443469-7443488 None:intergenic 25.0%
! AGAAATAAAATGTTCAGTGA+AGG - chr5_1:7443470-7443489 None:intergenic 25.0%
! ATATATCATATTATCATCCG+AGG + chr5_1:7443719-7443738 Msa0714690:intron 25.0%
!! TTTTCAGTGAAGAAACTTAA+AGG + chr5_1:7443793-7443812 Msa0714690:intron 25.0%
!! GAAACTTAAAGGACATTTTT+AGG + chr5_1:7443804-7443823 Msa0714690:intron 25.0%
!! TTTTCAGTGAAGAAACTTAA+AGG + chr5_1:7443793-7443812 Msa0714690:intron 25.0%
!! GAAACTTAAAGGACATTTTT+AGG + chr5_1:7443804-7443823 Msa0714690:intron 25.0%
!! GTTTTCAGTGAAGAAATTTA+AGG + chr5_1:7444116-7444135 Msa0714690:intron 25.0%
! TTTCAGTGAAGAAATTTAAG+GGG + chr5_1:7444118-7444137 Msa0714690:intron 25.0%
!! TATCTTTTCTTTCACCAAAT+TGG - chr5_1:7444250-7444269 None:intergenic 25.0%
! ATGGTATGAATCAAAGTTTA+GGG - chr5_1:7444531-7444550 None:intergenic 25.0%
!!! TTTTTTGTCTTTTCTTTCTC+AGG + chr5_1:7444656-7444675 Msa0714690:intron 25.0%
! AAAAATTAGGGTCCATATTA+GGG - chr5_1:7444721-7444740 None:intergenic 25.0%
!! TTTTCCTTTATTCCTCAATT+TGG + chr5_1:7445003-7445022 Msa0714690:intron 25.0%
! TTTCCTTTATTCCTCAATTT+GGG + chr5_1:7445004-7445023 Msa0714690:intron 25.0%
! AAGTACATTTACTTTGCAAT+AGG + chr5_1:7445225-7445244 Msa0714690:intron 25.0%
! AAAAGAGAAATATAAAAGCG+TGG + chr5_1:7445362-7445381 Msa0714690:intron 25.0%
! CAAAAATTAAGGTCCATATT+AGG + chr5_1:7445453-7445472 Msa0714690:intron 25.0%
! AAAATTAAGGTCCATATTAG+GGG + chr5_1:7445455-7445474 Msa0714690:intron 25.0%
! ATGCAATGGTAAATCAAAAA+TGG - chr5_1:7445484-7445503 None:intergenic 25.0%
! TGGACAATTAATTATATGCT+TGG + chr5_1:7446353-7446372 Msa0714690:intron 25.0%
! AAGGATACATAATAATAGCA+TGG - chr5_1:7446422-7446441 None:intergenic 25.0%
! TAGAAAAACTAGTGACATTA+AGG + chr5_1:7446640-7446659 Msa0714690:CDS 25.0%
! ATTGCAAAAAGTTTCATATC+TGG - chr5_1:7446832-7446851 None:intergenic 25.0%
! ACAAAGAATACTACTTACAA+TGG - chr5_1:7447688-7447707 None:intergenic 25.0%
! TTAAAAGATCCAAAAGGAAT+TGG + chr5_1:7447795-7447814 Msa0714690:intron 25.0%
! AAGCATTTCAAAACAAGAAT+TGG + chr5_1:7447939-7447958 Msa0714690:CDS 25.0%
! AATTGGCTGATAATAAATCT+TGG + chr5_1:7447956-7447975 Msa0714690:CDS 25.0%
! ATGCAATCTATCATATTATC+TGG - chr5_1:7448083-7448102 None:intergenic 25.0%
! GAATGTTGTAATTAGTATTG+AGG + chr5_1:7448103-7448122 Msa0714690:intron 25.0%
!!! TTGTCTTCATTCATTTTTCA+TGG + chr5_1:7448186-7448205 Msa0714690:intron 25.0%
!!! CATTCATTTTTCATGGAAAA+TGG + chr5_1:7448193-7448212 Msa0714690:intron 25.0%
!!! GAAAATGGATTGTTACAATT+TGG + chr5_1:7448208-7448227 Msa0714690:intron 25.0%
! ATATATATATTTGCACTGGA+AGG + chr5_1:7448327-7448346 Msa0714690:intron 25.0%
!!! AAACCAAAAAGCATTATTCA+AGG + chr5_1:7448681-7448700 Msa0714690:intron 25.0%
!! TAACCTTGAATAATGCTTTT+TGG - chr5_1:7448687-7448706 None:intergenic 25.0%
! CAAATTCCCTTCTTTATATA+GGG + chr5_1:7448851-7448870 Msa0714690:intron 25.0%
! AAATTCCCTTCTTTATATAG+GGG + chr5_1:7448852-7448871 Msa0714690:intron 25.0%
! AAATGAACAAAATAGAAGAG+AGG - chr5_1:7448970-7448989 None:intergenic 25.0%
!!! TTTTAAGTAAGCAATACGAT+AGG - chr5_1:7449035-7449054 None:intergenic 25.0%
!! ATCTAGGGTTATTGAATTAT+TGG + chr5_1:7449426-7449445 Msa0714690:intron 25.0%
!! TCTAGGGTTATTGAATTATT+GGG + chr5_1:7449427-7449446 Msa0714690:intron 25.0%
!!! ACTGTCTTTTTTGTTTGAAA+GGG + chr5_1:7449479-7449498 Msa0714690:intron 25.0%
! TATAGGCTAAAATATGGTAT+TGG + chr5_1:7449609-7449628 Msa0714690:intron 25.0%
!!! ATATTTTAGCCTATTTTGCA+GGG - chr5_1:7449636-7449655 None:intergenic 25.0%
! AATAGGCTAAAATATGGTAT+TGG + chr5_1:7449641-7449660 Msa0714690:intron 25.0%
!! CCAAAAAAAGAAATTTTGCA+GGG - chr5_1:7449820-7449839 None:intergenic 25.0%
!! TCCAAAAAAAGAAATTTTGC+AGG - chr5_1:7449821-7449840 None:intergenic 25.0%
! TGACAAATCATCACATAATT+GGG - chr5_1:7449857-7449876 None:intergenic 25.0%
!!! CCTGCAAAAAATTTTGTTTT+TGG - chr5_1:7450053-7450072 None:intergenic 25.0%
!!! CCAAAAACAAAATTTTTTGC+AGG + chr5_1:7450050-7450069 Msa0714690:intron 25.0%
! ATATGGCTAAAATATGGTAT+TGG - chr5_1:7450199-7450218 None:intergenic 25.0%
!!! TTCAACGTAAGTTTTATTAC+AGG + chr5_1:7450477-7450496 Msa0714690:intron 25.0%
!!! AGTTTTATTACAGGTAGTTT+TGG + chr5_1:7450486-7450505 Msa0714690:intron 25.0%
! AGTGACAATTTCAAAATGAA+AGG - chr5_1:7450541-7450560 None:intergenic 25.0%
! TGTGTTCCACTAAATTTATA+TGG + chr5_1:7450647-7450666 Msa0714690:intron 25.0%
! GTGTTCCACTAAATTTATAT+GGG + chr5_1:7450648-7450667 Msa0714690:intron 25.0%
! TGTTCCACTAAATTTATATG+GGG + chr5_1:7450649-7450668 Msa0714690:intron 25.0%
! CTAATTGGTTGAAATTCAAA+TGG - chr5_1:7450696-7450715 None:intergenic 25.0%
!!! GTTTTGGTCAAATGAATATA+AGG + chr5_1:7451077-7451096 Msa0714690:intron 25.0%
!! GTCAAAATTTTTACGTAGAA+GGG + chr5_1:7451122-7451141 Msa0714690:CDS 25.0%
!! TCAAAATTTTTACGTAGAAG+GGG + chr5_1:7451123-7451142 Msa0714690:CDS 25.0%
! AATTGAGCAAAACACTATTT+GGG - chr5_1:7451342-7451361 None:intergenic 25.0%
! ACAATTATCACACAAGTTAA+TGG - chr5_1:7451477-7451496 None:intergenic 25.0%
!!! AATCGATTTTTACAACTCTT+GGG - chr5_1:7451516-7451535 None:intergenic 25.0%
!!! AAATCGATTTTTACAACTCT+TGG - chr5_1:7451517-7451536 None:intergenic 25.0%
! ATATAACTAACAAATGACAG+AGG - chr5_1:7451684-7451703 None:intergenic 25.0%
! AGTAACCAAGTAAAAATGTA+AGG + chr5_1:7451749-7451768 Msa0714690:intron 25.0%
! GTAACCAAGTAAAAATGTAA+GGG + chr5_1:7451750-7451769 Msa0714690:intron 25.0%
! TAACCAAGTAAAAATGTAAG+GGG + chr5_1:7451751-7451770 Msa0714690:intron 25.0%
! ATGAAAAGAAAAACAAGTAG+AGG + chr5_1:7451774-7451793 Msa0714690:intron 25.0%
! GATCTATTGAATTGGTTATT+TGG + chr5_1:7452263-7452282 Msa0714690:intron 25.0%
! ATGTTATCATCATTAATAGG+AGG - chr5_1:7452331-7452350 None:intergenic 25.0%
! TCAAACAGCATAAATTAACA+AGG - chr5_1:7452463-7452482 None:intergenic 25.0%
!!! ATTCTGGAATGAAAAGAAAT+GGG - chr5_1:7452657-7452676 None:intergenic 25.0%
!!! AATTCTGGAATGAAAAGAAA+TGG - chr5_1:7452658-7452677 None:intergenic 25.0%
! ACGTAGTTATATTTCTCAAT+AGG - chr5_1:7452802-7452821 None:intergenic 25.0%
!! CATTTTCATATTGAGAAACA+AGG + chr5_1:7452836-7452855 Msa0714690:intron 25.0%
! AGAAACAAGGTAATTAAAAC+CGG + chr5_1:7452849-7452868 Msa0714690:intron 25.0%
! AATATGAGAGATTTGGATTT+GGG + chr5_1:7453260-7453279 Msa0714690:intron 25.0%
! AAACAAGATAAGACACTAAA+TGG - chr5_1:7453361-7453380 None:intergenic 25.0%
! ATAAGTGATAAGACACTAAA+TGG - chr5_1:7453402-7453421 None:intergenic 25.0%
!!! TTTTTTTTTGTTTGCCATGA+TGG + chr5_1:7453796-7453815 Msa0714690:intron 25.0%
!! TTTGGTAAATACCTTTAAGA+AGG - chr5_1:7453884-7453903 None:intergenic 25.0%
!!! TGTTTTTTCCTAATGCTATT+TGG + chr5_1:7453962-7453981 Msa0714690:intron 25.0%
!! AGAGAAAAGATGAATTTTCA+CGG - chr5_1:7454088-7454107 None:intergenic 25.0%
!! CATAAATTTTTGTTGGAGAA+GGG + chr5_1:7454140-7454159 Msa0714690:intron 25.0%
! ATTCTTTAATCAACACATAG+AGG + chr5_1:7454621-7454640 Msa0714690:three_prime_UTR 25.0%
! TTCTTTAATCAACACATAGA+GGG + chr5_1:7454622-7454641 Msa0714690:three_prime_UTR 25.0%
GTCAAAGTCTTTATCTAAAG+CGG + chr5_1:7440989-7441008 Msa0714690:five_prime_UTR 30.0%
AAAATTATCGAAACCCGATT+TGG - chr5_1:7441127-7441146 None:intergenic 30.0%
CTGAAAACAGATTATGAACA+AGG + chr5_1:7441598-7441617 Msa0714690:intron 30.0%
ACGTATTTGAACTTAACTAC+TGG - chr5_1:7441673-7441692 None:intergenic 30.0%
TTCAAATAGGGAAGCTTATT+AGG + chr5_1:7441696-7441715 Msa0714690:intron 30.0%
GATGTGTTTGTTTCAATGTT+TGG + chr5_1:7441718-7441737 Msa0714690:intron 30.0%
CTTCCAGTAATAATATTTCC+AGG + chr5_1:7441763-7441782 Msa0714690:intron 30.0%
AGTGAGTAGAATATTATTCC+TGG - chr5_1:7441784-7441803 None:intergenic 30.0%
AGGATTCTAATGTTATTCCT+TGG - chr5_1:7441947-7441966 None:intergenic 30.0%
! GTAAGAGTTTGTTTGTTTCA+AGG - chr5_1:7441967-7441986 None:intergenic 30.0%
CAACAACAAATTACAATCAG+AGG - chr5_1:7442252-7442271 None:intergenic 30.0%
TTGCTATAACTAACCAGATA+TGG + chr5_1:7442380-7442399 Msa0714690:CDS 30.0%
!!! TACGAGTTTTAAAGTTTGTG+TGG + chr5_1:7442702-7442721 Msa0714690:intron 30.0%
TACTGAGTTTATAATCTCGT+TGG - chr5_1:7442759-7442778 None:intergenic 30.0%
CCTTACAAAATTGGCTATTA+AGG - chr5_1:7442881-7442900 None:intergenic 30.0%
! CCTTAATAGCCAATTTTGTA+AGG + chr5_1:7442878-7442897 Msa0714690:intron 30.0%
AAGTGGAATAAGAGAGATAT+TGG - chr5_1:7442955-7442974 None:intergenic 30.0%
!! CAAATTTGGGTTGTAAAATG+AGG - chr5_1:7443144-7443163 None:intergenic 30.0%
! TTTTACAACCCAAATTTGCA+AGG + chr5_1:7443146-7443165 Msa0714690:intron 30.0%
TGTGTGTCTACATAGAATTT+GGG - chr5_1:7443189-7443208 None:intergenic 30.0%
TTGTGTGTCTACATAGAATT+TGG - chr5_1:7443190-7443209 None:intergenic 30.0%
AAGACAAGATAGATAGTGTT+AGG + chr5_1:7443208-7443227 Msa0714690:intron 30.0%
TTCTTGGGAATTCAATTCTT+GGG - chr5_1:7443236-7443255 None:intergenic 30.0%
TTTCTTGGGAATTCAATTCT+TGG - chr5_1:7443237-7443256 None:intergenic 30.0%
TTCAAAGAAAATACCAGTGA+TGG - chr5_1:7443627-7443646 None:intergenic 30.0%
!!! CATTTTTAGGATACTTGCTA+CGG + chr5_1:7443817-7443836 Msa0714690:intron 30.0%
!!! AAAAAACCAGCTTGTTTTGT+TGG + chr5_1:7443682-7443701 Msa0714690:intron 30.0%
TATTATCATCAGAGGTCATA+TGG + chr5_1:7443888-7443907 Msa0714690:intron 30.0%
ATTATCATCAGAGGTCATAT+GGG + chr5_1:7443889-7443908 Msa0714690:intron 30.0%
GTAAAAAACCATTGTTTCGT+TGG + chr5_1:7444002-7444021 Msa0714690:intron 30.0%
TATTATCATCAGAGGTCATT+CGG + chr5_1:7444047-7444066 Msa0714690:intron 30.0%
!!! TTTTTAAGTCAATCTGGTTC+TGG + chr5_1:7444094-7444113 Msa0714690:intron 30.0%
TTTCTTTCACCAAATTGGTT+CGG - chr5_1:7444245-7444264 None:intergenic 30.0%
AAGAATGACATAATAGCCAT+TGG - chr5_1:7444320-7444339 None:intergenic 30.0%
AGAAAAAATTCCACTAGAAG+TGG - chr5_1:7444379-7444398 None:intergenic 30.0%
!! CAAAAACTTTTTCCACTAGA+TGG - chr5_1:7444435-7444454 None:intergenic 30.0%
AAAGAAATTACATAAAGGGC+TGG - chr5_1:7444479-7444498 None:intergenic 30.0%
GATGGTATGAATCAAAGTTT+AGG - chr5_1:7444532-7444551 None:intergenic 30.0%
AAAATTAGGGTCCATATTAG+GGG - chr5_1:7444720-7444739 None:intergenic 30.0%
CAAAAATTAGGGTCCATATT+AGG - chr5_1:7444722-7444741 None:intergenic 30.0%
CTATATGCAGTTAGATAAAG+AGG - chr5_1:7444760-7444779 None:intergenic 30.0%
TTTATCTAACTGCATATAGC+AGG + chr5_1:7444761-7444780 Msa0714690:intron 30.0%
AGAGAGAATGATAAGAACAT+GGG - chr5_1:7444974-7444993 None:intergenic 30.0%
TAGAGAGAATGATAAGAACA+TGG - chr5_1:7444975-7444994 None:intergenic 30.0%
AATCCCAAATTGAGGAATAA+AGG - chr5_1:7445010-7445029 None:intergenic 30.0%
TTAGAAATTTGCAGATCTCA+GGG + chr5_1:7445128-7445147 Msa0714690:intron 30.0%
ACTCATAGAACAATTAGGAT+TGG + chr5_1:7445196-7445215 Msa0714690:intron 30.0%
CTCATAGAACAATTAGGATT+GGG + chr5_1:7445197-7445216 Msa0714690:intron 30.0%
CATTTACTTTGCAATAGGAT+TGG + chr5_1:7445230-7445249 Msa0714690:intron 30.0%
TTTGCAATAGGATTGGAAAT+TGG + chr5_1:7445237-7445256 Msa0714690:intron 30.0%
!!! CTTTTATTTTTCCCCTCAAA+AGG + chr5_1:7445385-7445404 Msa0714690:intron 30.0%
TAGAGAGCTGGAAATTAAAA+AGG - chr5_1:7445547-7445566 None:intergenic 30.0%
! AGAAGATTTTATACTTCGGT+TGG + chr5_1:7445777-7445796 Msa0714690:intron 30.0%
TAGAGTCAACAAAAAGACAA+TGG - chr5_1:7446117-7446136 None:intergenic 30.0%
!!! TCTTTTTGTTGACTCTAAGT+GGG + chr5_1:7446120-7446139 Msa0714690:intron 30.0%
AGCTATCAAAAACATCTTGT+CGG - chr5_1:7446148-7446167 None:intergenic 30.0%
! CTGATCAAGTATCTTCTTTT+GGG - chr5_1:7446204-7446223 None:intergenic 30.0%
! ACTGATCAAGTATCTTCTTT+TGG - chr5_1:7446205-7446224 None:intergenic 30.0%
ATGGTTTCATTATCCCATAA+TGG - chr5_1:7446403-7446422 None:intergenic 30.0%
AAAGATAAAATCACAGCAGA+AGG - chr5_1:7446441-7446460 None:intergenic 30.0%
TTTGGGGATTATATAATGTC+TGG + chr5_1:7446541-7446560 Msa0714690:intron 30.0%
!! TGGTTTATCTGATGTTGTTT+TGG + chr5_1:7446595-7446614 Msa0714690:CDS 30.0%
TCAATTGTTCTGATGAAAAC+TGG + chr5_1:7446717-7446736 Msa0714690:intron 30.0%
! TTTTGCAATGAAGACAATAG+TGG + chr5_1:7446843-7446862 Msa0714690:CDS 30.0%
CAGAAAAGAATCGTCAATTT+GGG - chr5_1:7446904-7446923 None:intergenic 30.0%
! TTTCTGTATTTTCACTTTGC+AGG + chr5_1:7447048-7447067 Msa0714690:intron 30.0%
TGTCTACATGTATCTTAACT+TGG + chr5_1:7447152-7447171 Msa0714690:intron 30.0%
! TCTTAACTTGGTTCATGAAT+AGG + chr5_1:7447164-7447183 Msa0714690:intron 30.0%
! TATCACAAACCAATTCCTTT+TGG - chr5_1:7447807-7447826 None:intergenic 30.0%
AAACCATATCATTCAATGAG+CGG - chr5_1:7447861-7447880 None:intergenic 30.0%
TCTTGGAAAACTCTTGAAAA+AGG + chr5_1:7447973-7447992 Msa0714690:CDS 30.0%
CTTGGAAAACTCTTGAAAAA+GGG + chr5_1:7447974-7447993 Msa0714690:CDS 30.0%
!! GAAAAAGGGCTTTTAGAAAA+AGG + chr5_1:7447988-7448007 Msa0714690:CDS 30.0%
! GAAAAAGGAATGGAGATTTT+TGG + chr5_1:7448003-7448022 Msa0714690:CDS 30.0%
! AGATATGAAAATGTACTGGT+TGG + chr5_1:7448128-7448147 Msa0714690:intron 30.0%
! AGTTCAACCTTGTTTGTAAT+TGG + chr5_1:7448239-7448258 Msa0714690:intron 30.0%
ATTCAGACCAATTACAAACA+AGG - chr5_1:7448249-7448268 None:intergenic 30.0%
ATCAAATGCTGAGATTGATT+TGG + chr5_1:7448267-7448286 Msa0714690:intron 30.0%
!! CTGAGATTGATTTGGTTAAT+AGG + chr5_1:7448275-7448294 Msa0714690:intron 30.0%
TCTAGGAAGGAATTAGTAAA+AGG + chr5_1:7448376-7448395 Msa0714690:intron 30.0%
ATATGGGAAAGAAAGGAATA+AGG + chr5_1:7448415-7448434 Msa0714690:intron 30.0%
CAGATTGTATTGTTACTAGT+TGG + chr5_1:7448447-7448466 Msa0714690:intron 30.0%
TGTAGGAATAGAAGGAATAA+GGG - chr5_1:7448507-7448526 None:intergenic 30.0%
ATGTAGGAATAGAAGGAATA+AGG - chr5_1:7448508-7448527 None:intergenic 30.0%
ATTCCTTCTATTCCTACATT+TGG + chr5_1:7448509-7448528 Msa0714690:intron 30.0%
AAGCATTATTCAAGGTTAAG+TGG + chr5_1:7448689-7448708 Msa0714690:intron 30.0%
CCTATATAAAGAAGGGAATT+TGG - chr5_1:7448853-7448872 None:intergenic 30.0%
CCAAATTCCCTTCTTTATAT+AGG + chr5_1:7448850-7448869 Msa0714690:intron 30.0%
CTGTACATACAAAGTTCAAT+AGG + chr5_1:7449005-7449024 Msa0714690:intron 30.0%
AAAATCTCTGTTGTCAATAG+CGG + chr5_1:7449051-7449070 Msa0714690:intron 30.0%
TTCAGATAACCCTTTATTAC+TGG + chr5_1:7449307-7449326 Msa0714690:intron 30.0%
!! TAACCCTTTATTACTGGTTT+AGG + chr5_1:7449313-7449332 Msa0714690:intron 30.0%
ACTCCTAAACCAGTAATAAA+GGG - chr5_1:7449319-7449338 None:intergenic 30.0%
TATTGTTACGTGACAAATCT+AGG + chr5_1:7449410-7449429 Msa0714690:intron 30.0%
ATTGTTACGTGACAAATCTA+GGG + chr5_1:7449411-7449430 Msa0714690:intron 30.0%
!!! TGGGCTTATGTTTTTTAACA+TGG + chr5_1:7449446-7449465 Msa0714690:intron 30.0%
!!! GGGCTTATGTTTTTTAACAT+GGG + chr5_1:7449447-7449466 Msa0714690:intron 30.0%
ACAAAAAAGACAGTCTTAAG+AGG - chr5_1:7449473-7449492 None:intergenic 30.0%
!!! GACTGTCTTTTTTGTTTGAA+AGG + chr5_1:7449478-7449497 Msa0714690:intron 30.0%
!!! CTGTCTTTTTTGTTTGAAAG+GGG + chr5_1:7449480-7449499 Msa0714690:intron 30.0%
!!! CATATTTTAGCCTATTTTGC+AGG - chr5_1:7449637-7449656 None:intergenic 30.0%
CTGCAAAATAGGCTAAAATA+TGG + chr5_1:7449635-7449654 Msa0714690:intron 30.0%
!!! CCCTGCAAAATTTCTTTTTT+TGG + chr5_1:7449817-7449836 Msa0714690:intron 30.0%
GACAAATCATCACATAATTG+GGG - chr5_1:7449856-7449875 None:intergenic 30.0%
GTGACAAATCATCACATAAT+TGG - chr5_1:7449858-7449877 None:intergenic 30.0%
TGACAAATCATCACATAACT+GGG + chr5_1:7450013-7450032 Msa0714690:intron 30.0%
TTTAACCATGGTTATCAATG+CGG - chr5_1:7450360-7450379 None:intergenic 30.0%
TTGAATCGACAAAATTTGCA+TGG - chr5_1:7450462-7450481 None:intergenic 30.0%
GACAATTTCAAAATGAAAGG+AGG - chr5_1:7450538-7450557 None:intergenic 30.0%
GTTCCACTAAATTTATATGG+GGG + chr5_1:7450650-7450669 Msa0714690:intron 30.0%
TCTAACACATTGTCTCTAAT+TGG - chr5_1:7450711-7450730 None:intergenic 30.0%
GTCTATCTCTATCATATATG+AGG - chr5_1:7450762-7450781 None:intergenic 30.0%
ATATATGATAGAGATAGACC+AGG + chr5_1:7450763-7450782 Msa0714690:intron 30.0%
TAAATGGTCTAAAGACATGT+TGG + chr5_1:7450886-7450905 Msa0714690:CDS 30.0%
AAATGGTCTAAAGACATGTT+GGG + chr5_1:7450887-7450906 Msa0714690:CDS 30.0%
GTAATAATGAAGTGAGAAGA+AGG + chr5_1:7451100-7451119 Msa0714690:CDS 30.0%
! GGTCAAAATTTTTACGTAGA+AGG + chr5_1:7451121-7451140 Msa0714690:CDS 30.0%
CAATTGAGCAAAACACTATT+TGG - chr5_1:7451343-7451362 None:intergenic 30.0%
!! ATCGATTTTTACAACTCTTG+GGG - chr5_1:7451515-7451534 None:intergenic 30.0%
! AGTTGTAAAAATCGATTTCG+AGG + chr5_1:7451519-7451538 Msa0714690:CDS 30.0%
ATACATACACAACCATAAAC+AGG - chr5_1:7451654-7451673 None:intergenic 30.0%
!!! ATTTTTTGCCATTCTTGATC+AGG - chr5_1:7451840-7451859 None:intergenic 30.0%
ATGGCAAAAAATAATCTAGC+CGG + chr5_1:7451848-7451867 Msa0714690:intron 30.0%
AATCAGCTTAAATCATAAGC+CGG - chr5_1:7451870-7451889 None:intergenic 30.0%
! TGGAATGAAATGCTTGATTT+TGG + chr5_1:7451925-7451944 Msa0714690:intron 30.0%
! GGAATGAAATGCTTGATTTT+GGG + chr5_1:7451926-7451945 Msa0714690:intron 30.0%
AACTACAATCTTCCATTTGA+AGG + chr5_1:7451954-7451973 Msa0714690:intron 30.0%
TATGATTGTTTGGATAGAGA+GGG - chr5_1:7452017-7452036 None:intergenic 30.0%
TTATGATTGTTTGGATAGAG+AGG - chr5_1:7452018-7452037 None:intergenic 30.0%
TAAGACTAAACACAATGATG+AGG - chr5_1:7452239-7452258 None:intergenic 30.0%
GTTTCATTGACATATAAAGG+AGG - chr5_1:7452407-7452426 None:intergenic 30.0%
GCTCCGTCATAATAAATTAT+AGG - chr5_1:7452765-7452784 None:intergenic 30.0%
TGAGAAATATAACTACGTGT+AGG + chr5_1:7452804-7452823 Msa0714690:intron 30.0%
TATAGCAGAGATACGAAAAT+TGG + chr5_1:7453108-7453127 Msa0714690:intron 30.0%
GAATATGAGAGATTTGGATT+TGG + chr5_1:7453259-7453278 Msa0714690:intron 30.0%
CATATTTGACCCGTTATAAT+AGG + chr5_1:7453283-7453302 Msa0714690:intron 30.0%
AGCAAGGAACATCATTTAAA+AGG - chr5_1:7453777-7453796 None:intergenic 30.0%
TGGCAAACAAAAAAAAAGCA+AGG - chr5_1:7453793-7453812 None:intergenic 30.0%
TTAAATGTAAGTTGCCATCA+TGG - chr5_1:7453813-7453832 None:intergenic 30.0%
CTTACATTTAATATGCCTTC+AGG + chr5_1:7453822-7453841 Msa0714690:intron 30.0%
TCTCTTTAATCTGAATGATC+AGG + chr5_1:7454103-7454122 Msa0714690:intron 30.0%
CCTTCTCCAACAAAAATTTA+TGG - chr5_1:7454142-7454161 None:intergenic 30.0%
! CCATAAATTTTTGTTGGAGA+AGG + chr5_1:7454139-7454158 Msa0714690:intron 30.0%
CAATCTTTCTCTGCTTAAAA+TGG + chr5_1:7454363-7454382 Msa0714690:intron 30.0%
CTTAAAATGGCAGGTTATTA+TGG + chr5_1:7454376-7454395 Msa0714690:intron 30.0%
! TAGGAATATTTGCTAAGGAA+CGG + chr5_1:7454417-7454436 Msa0714690:CDS 30.0%
TAAGCTTGTAATATCCATCT+GGG - chr5_1:7454767-7454786 None:intergenic 30.0%
ATAAGCTTGTAATATCCATC+TGG - chr5_1:7454768-7454787 None:intergenic 30.0%
! ATTTGTTGGGTAAAGTGACA+GGG - chr5_1:7440957-7440976 None:intergenic 35.0%
!! AATTTGTTGGGTAAAGTGAC+AGG - chr5_1:7440958-7440977 None:intergenic 35.0%
GCAATTGAATCTGCATGAAT+CGG + chr5_1:7441079-7441098 Msa0714690:five_prime_UTR 35.0%
! AGAAAGAGAAAGTATACGGA+AGG - chr5_1:7441239-7441258 None:intergenic 35.0%
CTACATTGTACGGTATTGTT+TGG + chr5_1:7441418-7441437 Msa0714690:intron 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG + chr5_1:7441557-7441576 Msa0714690:intron 35.0%
! ATGTTTGGAATTACATTCCC+TGG + chr5_1:7441733-7441752 Msa0714690:intron 35.0%
!! TTACTGGAAGTATCATTCCA+GGG - chr5_1:7441753-7441772 None:intergenic 35.0%
!! ATTACTGGAAGTATCATTCC+AGG - chr5_1:7441754-7441773 None:intergenic 35.0%
! TACTTATTAGGGGTGTGTTT+CGG + chr5_1:7441984-7442003 Msa0714690:intron 35.0%
TACAATGCAGACAAAGAAAG+TGG + chr5_1:7442123-7442142 Msa0714690:intron 35.0%
GAAACGAATTGTTACGGTTA+AGG + chr5_1:7442213-7442232 Msa0714690:CDS 35.0%
GGAATAACAGAATAGAGTGA+AGG + chr5_1:7442339-7442358 Msa0714690:intron 35.0%
TAACCAGATATGGAAATCGT+CGG + chr5_1:7442390-7442409 Msa0714690:CDS 35.0%
GAAGCAATTGACATGCATAA+TGG + chr5_1:7442478-7442497 Msa0714690:CDS 35.0%
ATGCTGTAAAGAATGCTGTT+CGG + chr5_1:7442587-7442606 Msa0714690:CDS 35.0%
AAAATCCATGTAGTGTAAGG+AGG - chr5_1:7442643-7442662 None:intergenic 35.0%
AGGAAAATCCATGTAGTGTA+AGG - chr5_1:7442646-7442665 None:intergenic 35.0%
! TTACACTACATGGATTTTCC+TGG + chr5_1:7442645-7442664 Msa0714690:CDS 35.0%
ATCACCTAGATATATGACCT+AGG + chr5_1:7442825-7442844 Msa0714690:intron 35.0%
CAAAATTGGCTATTAAGGTG+AGG - chr5_1:7442876-7442895 None:intergenic 35.0%
CTGACTCAACCTTACAAAAT+TGG - chr5_1:7442890-7442909 None:intergenic 35.0%
ATGGCTTAGAATGTAAGCTT+AGG - chr5_1:7442914-7442933 None:intergenic 35.0%
TCTTATTCCACTTGCATTTG+TGG + chr5_1:7442962-7442981 Msa0714690:intron 35.0%
ACTAATATGGGTGGAATAAC+AGG - chr5_1:7443033-7443052 None:intergenic 35.0%
GATAAGACTGGACATTTGAA+AGG - chr5_1:7443059-7443078 None:intergenic 35.0%
AGAAGATACTCTCCTTATAC+TGG + chr5_1:7443290-7443309 Msa0714690:intron 35.0%
!! TCCTTATACTGGTTTGAAAC+CGG + chr5_1:7443301-7443320 Msa0714690:intron 35.0%
ATAACATAGACCACCTTCAT+AGG + chr5_1:7443367-7443386 Msa0714690:intron 35.0%
! CTATAATTTGTGGTTCACCA+TGG - chr5_1:7443397-7443416 None:intergenic 35.0%
TACTAACAACAACCAGAACA+CGG - chr5_1:7443594-7443613 None:intergenic 35.0%
!!! CATTTTTAAGACACTTGCTG+CGG + chr5_1:7443656-7443675 Msa0714690:intron 35.0%
CAAGTTTCAACAAAACAAGC+TGG - chr5_1:7443691-7443710 None:intergenic 35.0%
!!! CAGCTTGTTTTGTTGAAACT+TGG + chr5_1:7443689-7443708 Msa0714690:intron 35.0%
TATTATCATCCGAGGTCATA+TGG + chr5_1:7443727-7443746 Msa0714690:intron 35.0%
ATTATCATCCGAGGTCATAT+GGG + chr5_1:7443728-7443747 Msa0714690:intron 35.0%
TAAAAATCCCCATATGACCT+CGG - chr5_1:7443739-7443758 None:intergenic 35.0%
TTATCATCAGAGGTCATATG+GGG + chr5_1:7443890-7443909 Msa0714690:intron 35.0%
ACCATTGTTTCGTTGGAATT+TGG + chr5_1:7444009-7444028 Msa0714690:intron 35.0%
TCCAAATTCCAACGAAACAA+TGG - chr5_1:7444013-7444032 None:intergenic 35.0%
ATTATCATCAGAGGTCATTC+GGG + chr5_1:7444048-7444067 Msa0714690:intron 35.0%
! ACTGGTGGATAATACATTCA+AGG - chr5_1:7444207-7444226 None:intergenic 35.0%
TTACATAAAGGGCTGGAATA+TGG - chr5_1:7444472-7444491 None:intergenic 35.0%
ATGAAAGAAATCAAAGGCAG+AGG + chr5_1:7444606-7444625 Msa0714690:intron 35.0%
! TTTTCTTTCTCAGGCATTCA+CGG + chr5_1:7444665-7444684 Msa0714690:intron 35.0%
TGGGTGGAACACAAAAATTA+GGG - chr5_1:7445442-7445461 None:intergenic 35.0%
ATGGGTGGAACACAAAAATT+AGG - chr5_1:7445441-7445460 None:intergenic 35.0%
! TAATTTTTGTGTTCCACCCA+TGG + chr5_1:7444733-7444752 Msa0714690:intron 35.0%
AGTTAGATAAAGAGGACCAT+GGG - chr5_1:7445423-7445442 None:intergenic 35.0%
AAAGAAAAAAAACGTCACGC+TGG + chr5_1:7444805-7444824 Msa0714690:intron 35.0%
! TTTAACTTTGTTGGGTTCCA+AGG + chr5_1:7444841-7444860 Msa0714690:intron 35.0%
CTATATTCAAGTCTCTTCCT+TGG - chr5_1:7444861-7444880 None:intergenic 35.0%
! AGTGATAGTGATATTGCTCT+TGG + chr5_1:7444907-7444926 Msa0714690:intron 35.0%
GAGAGAATGATAAGAACATG+GGG - chr5_1:7444973-7444992 None:intergenic 35.0%
GATTCTCTAATCCCAAATTG+AGG - chr5_1:7445018-7445037 None:intergenic 35.0%
GTTAGAAATTTGCAGATCTC+AGG + chr5_1:7445127-7445146 Msa0714690:intron 35.0%
TTTAGATCCAACAAATCCGA+CGG + chr5_1:7445170-7445189 Msa0714690:intron 35.0%
GGGAAACTCATAGAACAATT+AGG + chr5_1:7445191-7445210 Msa0714690:intron 35.0%
AGTTAGATAAAGAGGACCAT+GGG + chr5_1:7445423-7445442 Msa0714690:intron 35.0%
! TAATTTTTGTGTTCCACCCA+TGG - chr5_1:7444733-7444752 None:intergenic 35.0%
TGGGTGGAACACAAAAATTA+AGG + chr5_1:7445442-7445461 Msa0714690:intron 35.0%
AAAAATGGACACCCCTAATA+TGG - chr5_1:7445469-7445488 None:intergenic 35.0%
ATACAAGAAAACTAGAGAGC+TGG - chr5_1:7445559-7445578 None:intergenic 35.0%
CAGAAATCAAAGAATGACAG+AGG + chr5_1:7445630-7445649 Msa0714690:intron 35.0%
ACAGAGGATCAATCAGTATT+AGG + chr5_1:7445646-7445665 Msa0714690:CDS 35.0%
AGGATCAATCAGTATTAGGT+CGG + chr5_1:7445650-7445669 Msa0714690:CDS 35.0%
GAGAACATCTAACAGAGAAA+AGG - chr5_1:7445842-7445861 None:intergenic 35.0%
TAGACAGTTCAATCAAGTAC+AGG - chr5_1:7446014-7446033 None:intergenic 35.0%
!!! GTCTTTTTGTTGACTCTAAG+TGG + chr5_1:7446119-7446138 Msa0714690:intron 35.0%
TTCTGTAGAAAGAATTGCCT+TGG + chr5_1:7446309-7446328 Msa0714690:intron 35.0%
! AATTCTGCTGCTTCCATTAT+GGG + chr5_1:7446387-7446406 Msa0714690:intron 35.0%
! TTTTGCACTTGAGTCAGTTT+TGG + chr5_1:7446523-7446542 Msa0714690:intron 35.0%
! TTTGCACTTGAGTCAGTTTT+GGG + chr5_1:7446524-7446543 Msa0714690:intron 35.0%
AGCATGACTATCAGAGAATT+TGG + chr5_1:7446575-7446594 Msa0714690:intron 35.0%
ATCAGAACAATTGAGAGAGA+TGG - chr5_1:7446711-7446730 None:intergenic 35.0%
CCAGAAAAGAATCGTCAATT+TGG - chr5_1:7446905-7446924 None:intergenic 35.0%
! CCAAATTGACGATTCTTTTC+TGG + chr5_1:7446902-7446921 Msa0714690:CDS 35.0%
!! TGACGATTCTTTTCTGGAAA+AGG + chr5_1:7446908-7446927 Msa0714690:CDS 35.0%
GAAAGAATCTTACACGACAT+CGG - chr5_1:7446977-7446996 None:intergenic 35.0%
! GTTTTCGATTGCAGATTACA+TGG + chr5_1:7447070-7447089 Msa0714690:CDS 35.0%
AACTCATAAGTAGAACCTAC+CGG - chr5_1:7447118-7447137 None:intergenic 35.0%
!! TAAGTACTGGTCTATTCTTC+AGG + chr5_1:7447259-7447278 Msa0714690:intron 35.0%
!! AAGTACTGGTCTATTCTTCA+GGG + chr5_1:7447260-7447279 Msa0714690:intron 35.0%
CTATCTAGGAAAAAGTCTTC+CGG + chr5_1:7447417-7447436 Msa0714690:CDS 35.0%
! GCATTTTATACGTCTTCTAC+CGG - chr5_1:7447439-7447458 None:intergenic 35.0%
! TAGATGAAGCACTTTCACTT+TGG - chr5_1:7447464-7447483 None:intergenic 35.0%
! AAAGTGCTTCATCTAATGCT+AGG + chr5_1:7447469-7447488 Msa0714690:CDS 35.0%
!! TTCTAGTTTGCATGCAGAAA+CGG + chr5_1:7447631-7447650 Msa0714690:CDS 35.0%
!! AGGGCTTTTAGAAAAAGGAA+TGG + chr5_1:7447993-7448012 Msa0714690:CDS 35.0%
!!! TGGAGATTTTTGGCAAAAAC+AGG + chr5_1:7448013-7448032 Msa0714690:CDS 35.0%
CAGGTCAGATATGTTTGAAT+TGG + chr5_1:7448032-7448051 Msa0714690:intron 35.0%
GGTGAGATATGAAAATGTAC+TGG + chr5_1:7448124-7448143 Msa0714690:intron 35.0%
GGAAAGAAAGGAATAAGGAA+AGG + chr5_1:7448420-7448439 Msa0714690:intron 35.0%
ACTCCAAATGTAGGAATAGA+AGG - chr5_1:7448515-7448534 None:intergenic 35.0%
TAGGAAGATGGGAATTCTAA+CGG - chr5_1:7448539-7448558 None:intergenic 35.0%
AATTCCCATCTTCCTACATT+TGG + chr5_1:7448543-7448562 Msa0714690:intron 35.0%
TACTCCAAATGTAGGAAGAT+GGG - chr5_1:7448550-7448569 None:intergenic 35.0%
CTTTGTCGCCAATTAAAAAC+TGG - chr5_1:7449238-7449257 None:intergenic 35.0%
!! GTTTTTAATTGGCGACAAAG+AGG + chr5_1:7449238-7449257 Msa0714690:intron 35.0%
AAAGAGGAATAGCTTAGATC+AGG + chr5_1:7449254-7449273 Msa0714690:intron 35.0%
AAGAGGAATAGCTTAGATCA+GGG + chr5_1:7449255-7449274 Msa0714690:intron 35.0%
GAAGATGAAACACAGTAGTA+GGG + chr5_1:7449277-7449296 Msa0714690:intron 35.0%
AAGATGAAACACAGTAGTAG+GGG + chr5_1:7449278-7449297 Msa0714690:intron 35.0%
CACTCCTAAACCAGTAATAA+AGG - chr5_1:7449320-7449339 None:intergenic 35.0%
!! TTTTTGGTCCCTGCAAAAAT+AGG + chr5_1:7449716-7449735 Msa0714690:intron 35.0%
!!! AAAACTGGCCTATTTTTGCA+GGG - chr5_1:7450112-7450131 None:intergenic 35.0%
!!! TTGTCACTTTTGTGCATATG+TGG + chr5_1:7449871-7449890 Msa0714690:intron 35.0%
GTGACAAATCATCACATAAC+TGG + chr5_1:7450012-7450031 Msa0714690:intron 35.0%
GACAAATCATCACATAACTG+GGG + chr5_1:7450014-7450033 Msa0714690:intron 35.0%
!!! AAAACTGGCCTATTTTTGCA+GGG + chr5_1:7450112-7450131 Msa0714690:intron 35.0%
!! TTTTTGGTCCCTGCAAAAAT+AGG - chr5_1:7449716-7449735 None:intergenic 35.0%
TTAACCATGGTTATCAATGC+GGG - chr5_1:7450359-7450378 None:intergenic 35.0%
!!! AGACGTGCTTATTTTAACCA+TGG - chr5_1:7450372-7450391 None:intergenic 35.0%
TTAAAATAAGCACGTCTGCA+AGG + chr5_1:7450375-7450394 Msa0714690:intron 35.0%
TAAAATAAGCACGTCTGCAA+GGG + chr5_1:7450376-7450395 Msa0714690:intron 35.0%
TCGACAAAATTTGCATGGTA+TGG - chr5_1:7450457-7450476 None:intergenic 35.0%
! TTCAAAATGAAAGGAGGCAT+CGG - chr5_1:7450532-7450551 None:intergenic 35.0%
TGGATTCCACTAAATCATCT+AGG - chr5_1:7450676-7450695 None:intergenic 35.0%
TATTGTGGAGATCATTATCC+TGG - chr5_1:7450784-7450803 None:intergenic 35.0%
ATGATCTCCACAATACCTTA+AGG + chr5_1:7450789-7450808 Msa0714690:intron 35.0%
!! ATTCTTGCCTTAAGGTATTG+TGG - chr5_1:7450799-7450818 None:intergenic 35.0%
TTAAGAGATTCCTGGCTATT+AGG - chr5_1:7450869-7450888 None:intergenic 35.0%
ATAGCCAGGAATCTCTTAAA+TGG + chr5_1:7450870-7450889 Msa0714690:CDS 35.0%
TAGACCATTTAAGAGATTCC+TGG - chr5_1:7450877-7450896 None:intergenic 35.0%
AGTTGCATCAAAATCAACCT+TGG - chr5_1:7450997-7451016 None:intergenic 35.0%
AGCACTATATGCAAGTAACA+AGG - chr5_1:7451046-7451065 None:intergenic 35.0%
! GTGCTTAACTGAACAAGTTT+TGG + chr5_1:7451061-7451080 Msa0714690:intron 35.0%
TCCAGGTATACTTTAAACGA+CGG - chr5_1:7451155-7451174 None:intergenic 35.0%
! CCTTTTCCTGATTGAATGAT+AGG - chr5_1:7451187-7451206 None:intergenic 35.0%
CCTATCATTCAATCAGGAAA+AGG + chr5_1:7451184-7451203 Msa0714690:CDS 35.0%
GAAAAGGATTACAGAGAGAA+AGG + chr5_1:7451200-7451219 Msa0714690:CDS 35.0%
!! CGGAATTTCTAAAACCATCT+AGG - chr5_1:7451378-7451397 None:intergenic 35.0%
!!! GATGGTTTTAGAAATTCCGA+CGG + chr5_1:7451379-7451398 Msa0714690:intron 35.0%
GCTAATCGTATAATAACCGT+CGG - chr5_1:7451398-7451417 None:intergenic 35.0%
AATGTGATCCAGATGTTTGT+AGG + chr5_1:7451604-7451623 Msa0714690:CDS 35.0%
AGATGTTTGTAGGAACTGTT+GGG + chr5_1:7451614-7451633 Msa0714690:CDS 35.0%
! CATCCCCTTACATTTTTACT+TGG - chr5_1:7451757-7451776 None:intergenic 35.0%
GATATAGTCCTGATCAAGAA+TGG + chr5_1:7451829-7451848 Msa0714690:intron 35.0%
! ATGAAATGCTTGATTTTGGG+TGG + chr5_1:7451929-7451948 Msa0714690:intron 35.0%
ATGATTGTTTGGATAGAGAG+GGG - chr5_1:7452016-7452035 None:intergenic 35.0%
GGAGGATTGTTATGATTGTT+TGG - chr5_1:7452027-7452046 None:intergenic 35.0%
AAGAGAGTAGAAGTAAGAGT+GGG - chr5_1:7452048-7452067 None:intergenic 35.0%
AGTTGAACTTTGTATGGATC+AGG - chr5_1:7452081-7452100 None:intergenic 35.0%
CTACACAGTTGAACTTTGTA+TGG - chr5_1:7452087-7452106 None:intergenic 35.0%
AATGGACCATCAGTTAACAT+TGG - chr5_1:7452293-7452312 None:intergenic 35.0%
CTAAATTATTGTAGCAGCTG+TGG + chr5_1:7452484-7452503 Msa0714690:intron 35.0%
TAATTATCCCCTCTTTGACT+AGG - chr5_1:7452529-7452548 None:intergenic 35.0%
AAAGGAGGTAGGATTGAAAA+AGG - chr5_1:7452615-7452634 None:intergenic 35.0%
! TTTTCAATCCTACCTCCTTT+TGG + chr5_1:7452615-7452634 Msa0714690:intron 35.0%
TATCTGAAGATTCCAAAAGG+AGG - chr5_1:7452630-7452649 None:intergenic 35.0%
GTCTATCTGAAGATTCCAAA+AGG - chr5_1:7452633-7452652 None:intergenic 35.0%
! CCAGTTTTTGACCAATTTTC+CGG - chr5_1:7452957-7452976 None:intergenic 35.0%
CGGAAAATTGGTCAAAAACT+GGG + chr5_1:7452955-7452974 Msa0714690:intron 35.0%
GTCAAAAACTGGGATAAAAC+TGG + chr5_1:7452965-7452984 Msa0714690:intron 35.0%
CGTATCTCTGCTATATTAGA+AGG - chr5_1:7453103-7453122 None:intergenic 35.0%
!! AGGTTTTAATGATATGGGCT+TGG + chr5_1:7453303-7453322 Msa0714690:intron 35.0%
!! GGTTTTAATGATATGGGCTT+GGG + chr5_1:7453304-7453323 Msa0714690:intron 35.0%
! AATTATTATCGGTTGAACCC+TGG + chr5_1:7453667-7453686 Msa0714690:intron 35.0%
GAGTTCAACCAAATAGCATT+AGG - chr5_1:7453973-7453992 None:intergenic 35.0%
GTTTGTAAGCATGAATACCT+TGG + chr5_1:7454002-7454021 Msa0714690:intron 35.0%
TGTTCTTGATGCTTATCGAA+AGG + chr5_1:7454217-7454236 Msa0714690:CDS 35.0%
GTTCTTGATGCTTATCGAAA+GGG + chr5_1:7454218-7454237 Msa0714690:CDS 35.0%
AATACCTTCGCGTAACAATT+TGG - chr5_1:7454278-7454297 None:intergenic 35.0%
GCAATGTGAAACATAAGAGT+GGG - chr5_1:7454309-7454328 None:intergenic 35.0%
TGCAATGTGAAACATAAGAG+TGG - chr5_1:7454310-7454329 None:intergenic 35.0%
!! TTATGGTTGATGGAGATCAT+AGG + chr5_1:7454393-7454412 Msa0714690:CDS 35.0%
!! TATGGTTGATGGAGATCATA+GGG + chr5_1:7454394-7454413 Msa0714690:CDS 35.0%
! TAGGGTAGGAATATTTGCTA+AGG + chr5_1:7454412-7454431 Msa0714690:CDS 35.0%
CCTATGCTGTAACAATTGTA+TGG - chr5_1:7454706-7454725 None:intergenic 35.0%
CCATACAATTGTTACAGCAT+AGG + chr5_1:7454703-7454722 Msa0714690:three_prime_UTR 35.0%
AATGAGCAAATGCATATCAG+TGG + chr5_1:7454826-7454845 Msa0714690:three_prime_UTR 35.0%
ATTCCAAATGTCGCATTCCA+AGG + chr5_1:7441927-7441946 Msa0714690:intron 40.0%
ATTCCTTGGAATGCGACATT+TGG - chr5_1:7441933-7441952 None:intergenic 40.0%
! CGGTCATTTGATAACCTGTT+TGG + chr5_1:7442004-7442023 Msa0714690:intron 40.0%
AGCATGTAGTGAAACCAAAC+AGG - chr5_1:7442021-7442040 None:intergenic 40.0%
AATGCAGACAAAGAAAGTGG+AGG + chr5_1:7442126-7442145 Msa0714690:intron 40.0%
TGCAGTTAAAGACGTGTTAG+CGG + chr5_1:7442159-7442178 Msa0714690:CDS 40.0%
TGCTGCGAAACGAATTGTTA+CGG + chr5_1:7442207-7442226 Msa0714690:CDS 40.0%
ATCCAGACCTCTATCTGTAT+CGG - chr5_1:7442437-7442456 None:intergenic 40.0%
! GGTTATAATGGAGATGACCA+TGG + chr5_1:7442535-7442554 Msa0714690:CDS 40.0%
! GGAGGCAATCTTTTTACTTC+AGG - chr5_1:7442625-7442644 None:intergenic 40.0%
GGTCATATATCTAGGTGATG+TGG - chr5_1:7442824-7442843 None:intergenic 40.0%
ACCTAGATATATGACCTAGG+TGG + chr5_1:7442828-7442847 Msa0714690:intron 40.0%
ACCACCTAGGTCATATATCT+AGG - chr5_1:7442832-7442851 None:intergenic 40.0%
AGCCATCTTAGATCTGTTAC+TGG + chr5_1:7442928-7442947 Msa0714690:intron 40.0%
GTCCAGTAACAGATCTAAGA+TGG - chr5_1:7442933-7442952 None:intergenic 40.0%
GAAAGGATGACTAATATGGG+TGG - chr5_1:7443042-7443061 None:intergenic 40.0%
! AAATGTCCAGTCTTATCGTG+AGG + chr5_1:7443062-7443081 Msa0714690:intron 40.0%
! AATGTCCAGTCTTATCGTGA+GGG + chr5_1:7443063-7443082 Msa0714690:intron 40.0%
CCTAGTGAGATGACATAAGT+GGG + chr5_1:7443109-7443128 Msa0714690:intron 40.0%
TAGCTCGACCTTGCAAATTT+GGG - chr5_1:7443157-7443176 None:intergenic 40.0%
! ACCGGTTTCAAACCAGTATA+AGG - chr5_1:7443305-7443324 None:intergenic 40.0%
TTATAGGGAGGTAGTGAAGA+TGG - chr5_1:7443549-7443568 None:intergenic 40.0%
ATGAAGGTGGAATTATAGGG+AGG - chr5_1:7443561-7443580 None:intergenic 40.0%
GCGATGAAGGTGGAATTATA+GGG - chr5_1:7443564-7443583 None:intergenic 40.0%
AGCGATGAAGGTGGAATTAT+AGG - chr5_1:7443565-7443584 None:intergenic 40.0%
TTATCATCCGAGGTCATATG+GGG + chr5_1:7443729-7443748 Msa0714690:intron 40.0%
CAAGTTCCAACAAAACAAGC+TGG - chr5_1:7443852-7443871 None:intergenic 40.0%
!!! CAGCTTGTTTTGTTGGAACT+TGG + chr5_1:7443850-7443869 Msa0714690:intron 40.0%
!!! CATTTTTAGGACACTTGCTG+CGG + chr5_1:7443978-7443997 Msa0714690:intron 40.0%
AGAAATTTAAGGGGATTGCC+TGG + chr5_1:7444127-7444146 Msa0714690:intron 40.0%
GTGCGTACAGATAAATCCAA+TGG + chr5_1:7444301-7444320 Msa0714690:intron 40.0%
! CCTTTTATAGGTGGTTCACA+AGG - chr5_1:7444347-7444366 None:intergenic 40.0%
CCTTGTGAACCACCTATAAA+AGG + chr5_1:7444344-7444363 Msa0714690:intron 40.0%
! CATAGACTGCCTTTTATAGG+TGG - chr5_1:7444356-7444375 None:intergenic 40.0%
! TGGCATAGACTGCCTTTTAT+AGG - chr5_1:7444359-7444378 None:intergenic 40.0%
TTGCAACTAACTCCATCTAG+TGG + chr5_1:7444420-7444439 Msa0714690:intron 40.0%
AGGTTGAACTGACAAACAGA+TGG - chr5_1:7444550-7444569 None:intergenic 40.0%
ATACATACACCAAAGACCTC+AGG - chr5_1:7444570-7444589 None:intergenic 40.0%
AAGAAATCAAAGGCAGAGGA+AGG + chr5_1:7444610-7444629 Msa0714690:intron 40.0%
TAGGGGTTCCCATCAAAAAT+AGG - chr5_1:7444703-7444722 None:intergenic 40.0%
TTTGATGGGAACCCCTAATA+TGG + chr5_1:7444706-7444725 Msa0714690:intron 40.0%
CAGTTAGATAAAGAGGACCA+TGG - chr5_1:7445422-7445441 None:intergenic 40.0%
TTAGATCCAACAAATCCGAC+GGG + chr5_1:7445171-7445190 Msa0714690:intron 40.0%
TTGTTCTATGAGTTTCCCGT+CGG - chr5_1:7445189-7445208 None:intergenic 40.0%
! TACAGCAGGTTACCTTTTGA+GGG - chr5_1:7445400-7445419 None:intergenic 40.0%
TTTATCTAACTGCCTACAGC+AGG - chr5_1:7445414-7445433 None:intergenic 40.0%
CTGTAGGCAGTTAGATAAAG+AGG + chr5_1:7445415-7445434 Msa0714690:intron 40.0%
CAGTTAGATAAAGAGGACCA+TGG + chr5_1:7445422-7445441 Msa0714690:intron 40.0%
TCTGCACACAAATGATCACA+AGG - chr5_1:7445614-7445633 None:intergenic 40.0%
ATCAATCAGTATTAGGTCGG+AGG + chr5_1:7445653-7445672 Msa0714690:CDS 40.0%
GGAACTAATTGACGAAGAAG+AGG + chr5_1:7445732-7445751 Msa0714690:CDS 40.0%
CTCTGTTAGATGTTCTCTGT+TGG + chr5_1:7445845-7445864 Msa0714690:intron 40.0%
! CAATTCTGCTGCTTCCATTA+TGG + chr5_1:7446386-7446405 Msa0714690:intron 40.0%
! TTGCACTTGAGTCAGTTTTG+GGG + chr5_1:7446525-7446544 Msa0714690:intron 40.0%
!!! TGATGTTGTTTTGGAGATCC+TGG + chr5_1:7446604-7446623 Msa0714690:CDS 40.0%
AAAGCCAGCACAAAGCAAAT+GGG - chr5_1:7446772-7446791 None:intergenic 40.0%
TAAAGCCAGCACAAAGCAAA+TGG - chr5_1:7446773-7446792 None:intergenic 40.0%
CATCGTCGAACATCTTATAC+AGG + chr5_1:7446806-7446825 Msa0714690:intron 40.0%
! AGTGGCGAGGATTCTAAAAA+TGG + chr5_1:7446861-7446880 Msa0714690:CDS 40.0%
TCTGGAAAAGGATCTTGAAG+CGG + chr5_1:7446920-7446939 Msa0714690:CDS 40.0%
GTAAGATTCTTTCCCCATGA+AGG + chr5_1:7446984-7447003 Msa0714690:intron 40.0%
ATGCTATTCAGTGCCTTCAT+GGG - chr5_1:7447000-7447019 None:intergenic 40.0%
ACTCATAAGTAGAACCTACC+GGG - chr5_1:7447117-7447136 None:intergenic 40.0%
CATGGTACATCTTCAGTGTT+AGG - chr5_1:7447216-7447235 None:intergenic 40.0%
AACACTGAAGATGTACCATG+TGG + chr5_1:7447216-7447235 Msa0714690:CDS 40.0%
ACACTGAAGATGTACCATGT+GGG + chr5_1:7447217-7447236 Msa0714690:CDS 40.0%
CTTACCGTTCGGAAACAATT+TGG - chr5_1:7447243-7447262 None:intergenic 40.0%
ATAGACCAGTACTTACCGTT+CGG - chr5_1:7447254-7447273 None:intergenic 40.0%
!! AGTACTGGTCTATTCTTCAG+GGG + chr5_1:7447261-7447280 Msa0714690:intron 40.0%
TGCCTTGAGTACCTATAAGT+CGG - chr5_1:7447334-7447353 None:intergenic 40.0%
GGTACTCAAGGCAGAAAAAA+TGG + chr5_1:7447341-7447360 Msa0714690:intron 40.0%
AGTCTGAGTAGATGTGACTT+TGG - chr5_1:7447367-7447386 None:intergenic 40.0%
GATGTTGAAGACAAATCCTC+TGG + chr5_1:7447387-7447406 Msa0714690:CDS 40.0%
!!! CACTGGTTTAGTTTTAGGTG+GGG - chr5_1:7447562-7447581 None:intergenic 40.0%
!!! CCACTGGTTTAGTTTTAGGT+GGG - chr5_1:7447563-7447582 None:intergenic 40.0%
CCACCTAAAACTAAACCAGT+GGG + chr5_1:7447561-7447580 Msa0714690:CDS 40.0%
CACCTAAAACTAAACCAGTG+GGG + chr5_1:7447562-7447581 Msa0714690:CDS 40.0%
!!! TTCCCCACTGGTTTAGTTTT+AGG - chr5_1:7447567-7447586 None:intergenic 40.0%
TAAGAGAAACAGTAAGCGAG+TGG + chr5_1:7447599-7447618 Msa0714690:CDS 40.0%
ATATCATTCAATGAGCGGTC+AGG - chr5_1:7447856-7447875 None:intergenic 40.0%
TGACCGCTCATTGAATGATA+TGG + chr5_1:7447855-7447874 Msa0714690:CDS 40.0%
CACGAGGAAAGAAGAATTTG+TGG + chr5_1:7447912-7447931 Msa0714690:CDS 40.0%
AGAGAGGATATGGGAAAGAA+AGG + chr5_1:7448408-7448427 Msa0714690:intron 40.0%
TCTAACGGTACTCCAAATGT+AGG - chr5_1:7448524-7448543 None:intergenic 40.0%
GTACTCCAAATGTAGGAAGA+TGG - chr5_1:7448551-7448570 None:intergenic 40.0%
! TCCTACATTTGGAGTACCAT+AGG + chr5_1:7448554-7448573 Msa0714690:intron 40.0%
TCCTATGGTACTCCAAATGT+AGG - chr5_1:7448558-7448577 None:intergenic 40.0%
CCAATTGATGGGAATTCCTA+TGG - chr5_1:7448573-7448592 None:intergenic 40.0%
CCATAGGAATTCCCATCAAT+TGG + chr5_1:7448570-7448589 Msa0714690:intron 40.0%
!! CAATGAGAGCACCAATTGAT+GGG - chr5_1:7448584-7448603 None:intergenic 40.0%
!! TCAATGAGAGCACCAATTGA+TGG - chr5_1:7448585-7448604 None:intergenic 40.0%
ACCACAATGCCTTTGTTCTT+GGG + chr5_1:7448628-7448647 Msa0714690:intron 40.0%
! GTTCACAGCTATTGGTTGTA+TGG - chr5_1:7448738-7448757 None:intergenic 40.0%
ACTTGGACATTTGAGCCTAT+GGG - chr5_1:7448776-7448795 None:intergenic 40.0%
ACCTCTAGGTGGTAATTAGT+AGG + chr5_1:7448804-7448823 Msa0714690:intron 40.0%
TCCTACTAATTACCACCTAG+AGG - chr5_1:7448808-7448827 None:intergenic 40.0%
TCTAGGTGGTAATTAGTAGG+AGG + chr5_1:7448807-7448826 Msa0714690:intron 40.0%
CTAGGTGGTAATTAGTAGGA+GGG + chr5_1:7448808-7448827 Msa0714690:intron 40.0%
TAGGTGGTAATTAGTAGGAG+GGG + chr5_1:7448809-7448828 Msa0714690:intron 40.0%
CCACACCCCTATATAAAGAA+GGG - chr5_1:7448860-7448879 None:intergenic 40.0%
! CCTTCTTTATATAGGGGTGT+GGG + chr5_1:7448858-7448877 Msa0714690:intron 40.0%
! CTTCTTTATATAGGGGTGTG+GGG + chr5_1:7448859-7448878 Msa0714690:intron 40.0%
CTAACAACAATTCACTCAGC+AGG - chr5_1:7448908-7448927 None:intergenic 40.0%
GTTTACATGTGTGATGTGGT+GGG - chr5_1:7449176-7449195 None:intergenic 40.0%
TGTTTACATGTGTGATGTGG+TGG - chr5_1:7449177-7449196 None:intergenic 40.0%
GCATGTTTACATGTGTGATG+TGG - chr5_1:7449180-7449199 None:intergenic 40.0%
AACATGCTACGTTGCTGAAA+CGG + chr5_1:7449193-7449212 Msa0714690:intron 40.0%
GGAAGATGAAACACAGTAGT+AGG + chr5_1:7449276-7449295 Msa0714690:intron 40.0%
TAGGAGTGAAGAAAAAGAGC+AGG + chr5_1:7449332-7449351 Msa0714690:intron 40.0%
AAAAGAGCAGGACAGGAAAA+AGG + chr5_1:7449344-7449363 Msa0714690:intron 40.0%
! GACAGGAAAAAGGCATGAAA+CGG + chr5_1:7449354-7449373 Msa0714690:intron 40.0%
!! CAAAACTGGCCTATTTTGCA+GGG - chr5_1:7450172-7450191 None:intergenic 40.0%
!!! CAAAACTGGCCTATTTTTGC+AGG - chr5_1:7450111-7450130 None:intergenic 40.0%
! CTGCAAAAATAGGCCAGTTT+TGG + chr5_1:7449726-7449745 Msa0714690:intron 40.0%
TCATCACATAATTGGGGTCA+GGG - chr5_1:7449850-7449869 None:intergenic 40.0%
ATCATCACATAATTGGGGTC+AGG - chr5_1:7449851-7449870 None:intergenic 40.0%
! CTGCAAAAATAGGCCAGTTT+TGG - chr5_1:7449726-7449745 None:intergenic 40.0%
!!! CAAAACTGGCCTATTTTTGC+AGG + chr5_1:7450111-7450130 Msa0714690:intron 40.0%
!! CAAAACTGGCCTATTTTGCA+GGG + chr5_1:7450172-7450191 Msa0714690:intron 40.0%
CCAATTCGAGAGAATGTGTT+GGG - chr5_1:7450615-7450634 None:intergenic 40.0%
ACCAATTCGAGAGAATGTGT+TGG - chr5_1:7450616-7450635 None:intergenic 40.0%
ACACATTCTCTCGAATTGGT+TGG + chr5_1:7450616-7450635 Msa0714690:intron 40.0%
AGGCCCCCATATAAATTTAG+TGG - chr5_1:7450656-7450675 None:intergenic 40.0%
TGTGTTAGATAGTGTGTTGC+TGG + chr5_1:7450732-7450751 Msa0714690:intron 40.0%
CATCAGCAATTCTTGCCTTA+AGG - chr5_1:7450807-7450826 None:intergenic 40.0%
CTTAAGGCAAGAATTGCTGA+TGG + chr5_1:7450805-7450824 Msa0714690:intron 40.0%
! TCCGTCGTTTAAAGTATACC+TGG + chr5_1:7451151-7451170 Msa0714690:CDS 40.0%
! ATCCACATGGATTGTACTGT+CGG - chr5_1:7451236-7451255 None:intergenic 40.0%
GAGTGTCCTTGTCTTCTAAA+TGG + chr5_1:7451276-7451295 Msa0714690:CDS 40.0%
CAGGTTCCATTTAGAAGACA+AGG - chr5_1:7451285-7451304 None:intergenic 40.0%
CAACAGTTCCTACAAACATC+TGG - chr5_1:7451615-7451634 None:intergenic 40.0%
CAGATGTTTGTAGGAACTGT+TGG + chr5_1:7451613-7451632 Msa0714690:CDS 40.0%
AGGTGAGCATTACCTGTTTA+TGG + chr5_1:7451639-7451658 Msa0714690:intron 40.0%
AGGTGTTAGATACTCTGTAG+TGG + chr5_1:7451794-7451813 Msa0714690:intron 40.0%
! TCTGTAGTGGAAAACACAGT+TGG + chr5_1:7451807-7451826 Msa0714690:intron 40.0%
GCATCTCTCTTTCCTTCAAA+TGG - chr5_1:7451969-7451988 None:intergenic 40.0%
GGATAGAGAGGGGAAAAAAA+GGG - chr5_1:7452006-7452025 None:intergenic 40.0%
TGGATAGAGAGGGGAAAAAA+AGG - chr5_1:7452007-7452026 None:intergenic 40.0%
GAAGAGAGTAGAAGTAAGAG+TGG - chr5_1:7452049-7452068 None:intergenic 40.0%
TTCAACTGTGTAGAGCTGAT+TGG + chr5_1:7452094-7452113 Msa0714690:intron 40.0%
TCAACTGTGTAGAGCTGATT+GGG + chr5_1:7452095-7452114 Msa0714690:intron 40.0%
GACTAAACACAATGATGAGG+CGG - chr5_1:7452236-7452255 None:intergenic 40.0%
TAAAGGAGGCAGATAAGTTC+AGG - chr5_1:7452393-7452412 None:intergenic 40.0%
TTGGGATTCCTAGTCAAAGA+GGG + chr5_1:7452518-7452537 Msa0714690:CDS 40.0%
TCTTCTCAAACAGCAGCAAA+AGG + chr5_1:7452570-7452589 Msa0714690:CDS 40.0%
AGGATTGAAAAAGGCAGTCA+AGG - chr5_1:7452606-7452625 None:intergenic 40.0%
TGAAGATTCCAAAAGGAGGT+AGG - chr5_1:7452626-7452645 None:intergenic 40.0%
! TTATGACGGAGCGAAATGTA+AGG + chr5_1:7452773-7452792 Msa0714690:intron 40.0%
! TATGACGGAGCGAAATGTAA+GGG + chr5_1:7452774-7452793 Msa0714690:intron 40.0%
CAAGGTAATTAAAACCGGAC+CGG + chr5_1:7452854-7452873 Msa0714690:intron 40.0%
! CCAATTTTCCGGTTTTTGAC+CGG - chr5_1:7452946-7452965 None:intergenic 40.0%
CCGGAAAATTGGTCAAAAAC+TGG + chr5_1:7452954-7452973 Msa0714690:intron 40.0%
CTGGGATAAAACTGGAAAAC+CGG + chr5_1:7452973-7452992 Msa0714690:intron 40.0%
! AGGAAAATAATCAGCGTCGA+AGG + chr5_1:7453050-7453069 Msa0714690:intron 40.0%
CAGCACAGTGAATAAGAGAT+AGG + chr5_1:7453198-7453217 Msa0714690:intron 40.0%
CCTAATCCCATATTGTTGTG+CGG - chr5_1:7453227-7453246 None:intergenic 40.0%
CGCACAACAATATGGGATTA+GGG + chr5_1:7453225-7453244 Msa0714690:intron 40.0%
! ATATGCCTTCAGGTTCTTCT+TGG + chr5_1:7453832-7453851 Msa0714690:intron 40.0%
CATGCTTACAAACGCTATTC+TGG - chr5_1:7453995-7454014 None:intergenic 40.0%
! GAATACCTTGGAGAGTATAC+CGG + chr5_1:7454014-7454033 Msa0714690:intron 40.0%
! AACAATTTGGAACAGGAGAG+TGG - chr5_1:7454265-7454284 None:intergenic 40.0%
! TTCGCGTAACAATTTGGAAC+AGG - chr5_1:7454272-7454291 None:intergenic 40.0%
TGTTCCAAATTGTTACGCGA+AGG + chr5_1:7454271-7454290 Msa0714690:CDS 40.0%
CTTTCTCTGCTTAAAATGGC+AGG + chr5_1:7454367-7454386 Msa0714690:intron 40.0%
TGGCAGGTTATTATGGTTGA+TGG + chr5_1:7454383-7454402 Msa0714690:intron 40.0%
!!! GTCTTCTTTTTTCGATCCAG+GGG - chr5_1:7454522-7454541 None:intergenic 40.0%
!!! CGTCTTCTTTTTTCGATCCA+GGG - chr5_1:7454523-7454542 None:intergenic 40.0%
CCTGGATCGAAAAAAGAAGA+CGG + chr5_1:7454521-7454540 Msa0714690:CDS 40.0%
! GAGTTCTTTTGTTCGTAGCA+AGG + chr5_1:7454680-7454699 Msa0714690:three_prime_UTR 40.0%
CTTCGGGAAAAAGGATTACA+CGG - chr5_1:7454803-7454822 None:intergenic 40.0%
! GTGTAATCCTTTTTCCCGAA+GGG + chr5_1:7454802-7454821 Msa0714690:three_prime_UTR 40.0%
! TGTAATCCTTTTTCCCGAAG+GGG + chr5_1:7454803-7454822 Msa0714690:three_prime_UTR 40.0%
!! CCGATTTGGAAATGCGGAAT+CGG - chr5_1:7441113-7441132 None:intergenic 45.0%
CCGATTCCGCATTTCCAAAT+CGG + chr5_1:7441110-7441129 Msa0714690:five_prime_UTR 45.0%
CGATTCCGCATTTCCAAATC+GGG + chr5_1:7441111-7441130 Msa0714690:five_prime_UTR 45.0%
!! CGAAACCCGATTTGGAAATG+CGG - chr5_1:7441119-7441138 None:intergenic 45.0%
TCGGATCTGGAAGAAGAAGA+CGG - chr5_1:7441203-7441222 None:intergenic 45.0%
AAGTATACGGAAGGATCGAG+CGG - chr5_1:7441230-7441249 None:intergenic 45.0%
GTTTCACTACATGCTGAGTG+TGG + chr5_1:7442026-7442045 Msa0714690:intron 45.0%
GCTAACACGTCTTTAACTGC+AGG - chr5_1:7442160-7442179 None:intergenic 45.0%
!! GTCTGGATTTGCTGAGTAAG+AGG + chr5_1:7442449-7442468 Msa0714690:CDS 45.0%
ATGCATAATGGTGTTCGTGC+CGG + chr5_1:7442490-7442509 Msa0714690:CDS 45.0%
! TTCGTGCCGGTAATGATGAT+GGG + chr5_1:7442503-7442522 Msa0714690:CDS 45.0%
!! AATGATGATGGGGAGAGCAA+TGG + chr5_1:7442514-7442533 Msa0714690:CDS 45.0%
GGGGAGAGCAATGGTTATAA+TGG + chr5_1:7442523-7442542 Msa0714690:CDS 45.0%
! TGGAGATGACCATGGTTCTA+CGG + chr5_1:7442543-7442562 Msa0714690:CDS 45.0%
GATTGCCTCCTTACACTACA+TGG + chr5_1:7442635-7442654 Msa0714690:CDS 45.0%
! CTACATGGATTTTCCTGGAC+AGG + chr5_1:7442650-7442669 Msa0714690:CDS 45.0%
!!! GTGTGCAGTTTTGAGACTGA+GGG + chr5_1:7442996-7443015 Msa0714690:intron 45.0%
GCCTAGTGAGATGACATAAG+TGG + chr5_1:7443108-7443127 Msa0714690:intron 45.0%
CCCACTTATGTCATCTCACT+AGG - chr5_1:7443112-7443131 None:intergenic 45.0%
GTGAGATGACATAAGTGGGT+TGG + chr5_1:7443113-7443132 Msa0714690:intron 45.0%
CTAGCTCGACCTTGCAAATT+TGG - chr5_1:7443158-7443177 None:intergenic 45.0%
ACATAGACCACCTTCATAGG+TGG + chr5_1:7443370-7443389 Msa0714690:intron 45.0%
TGTAGACCCCAACAAATGTG+GGG - chr5_1:7443526-7443545 None:intergenic 45.0%
GTGTAGACCCCAACAAATGT+GGG - chr5_1:7443527-7443546 None:intergenic 45.0%
! AATACCAGTGATGGTTCTGC+AGG - chr5_1:7443618-7443637 None:intergenic 45.0%
CGGAACAAACATCTCAAACC+AGG - chr5_1:7444148-7444167 None:intergenic 45.0%
! GGTTTGAGATGTTTGTTCCG+TGG + chr5_1:7444148-7444167 Msa0714690:intron 45.0%
ACAGCATGCAAAACAGACCA+CGG - chr5_1:7444168-7444187 None:intergenic 45.0%
!! TTTCACCAAATTGGTTCGGC+GGG - chr5_1:7444241-7444260 None:intergenic 45.0%
!! CTTTCACCAAATTGGTTCGG+CGG - chr5_1:7444242-7444261 None:intergenic 45.0%
CTGTTTGTCAGTTCAACCTG+AGG + chr5_1:7444551-7444570 Msa0714690:intron 45.0%
TCAGTTCAACCTGAGGTCTT+TGG + chr5_1:7444558-7444577 Msa0714690:intron 45.0%
TAGATAAAGAGGACCATGGG+TGG - chr5_1:7445426-7445445 None:intergenic 45.0%
TAGCAGGTCACCCTTTAAGT+TGG + chr5_1:7444777-7444796 Msa0714690:intron 45.0%
GAAAAAAAACGTCACGCTGG+AGG + chr5_1:7444808-7444827 Msa0714690:intron 45.0%
ATGTCTATCGTTCCTCAGCA+AGG - chr5_1:7444936-7444955 None:intergenic 45.0%
TTGCTGAGGAACGATAGACA+TGG + chr5_1:7444935-7444954 Msa0714690:intron 45.0%
! ACAGCAGGTTACCTTTTGAG+GGG - chr5_1:7445399-7445418 None:intergenic 45.0%
! CTACAGCAGGTTACCTTTTG+AGG - chr5_1:7445401-7445420 None:intergenic 45.0%
CTCAAAAGGTAACCTGCTGT+AGG + chr5_1:7445399-7445418 Msa0714690:intron 45.0%
TAGATAAAGAGGACCATGGG+TGG + chr5_1:7445426-7445445 Msa0714690:intron 45.0%
GTGATCAGTCTCGTATGCAA+TGG - chr5_1:7445498-7445517 None:intergenic 45.0%
ACTTATTTGCAGCGACAGTG+AGG + chr5_1:7445708-7445727 Msa0714690:CDS 45.0%
ATGGAAGCAGCAGAATTGAC+AGG - chr5_1:7446384-7446403 None:intergenic 45.0%
!! TTCTAGAAAAGCACTGAGCC+AGG - chr5_1:7446625-7446644 None:intergenic 45.0%
ATTGAGAGAGATGGCAGAAG+TGG - chr5_1:7446702-7446721 None:intergenic 45.0%
CAAAGCAAATGGGAAACAGC+TGG - chr5_1:7446762-7446781 None:intergenic 45.0%
GTTTCCCATTTGCTTTGTGC+TGG + chr5_1:7446765-7446784 Msa0714690:intron 45.0%
CAATGAAGACAATAGTGGCG+AGG + chr5_1:7446848-7446867 Msa0714690:CDS 45.0%
TGCTATTCAGTGCCTTCATG+GGG - chr5_1:7446999-7447018 None:intergenic 45.0%
CATGCTATTCAGTGCCTTCA+TGG - chr5_1:7447001-7447020 None:intergenic 45.0%
CAGATTACATGGATGCTCTC+AGG + chr5_1:7447081-7447100 Msa0714690:CDS 45.0%
TGGTTCATGAATAGGCTGAG+AGG + chr5_1:7447172-7447191 Msa0714690:intron 45.0%
GGTACATCTTCAGTGTTAGG+AGG - chr5_1:7447213-7447232 None:intergenic 45.0%
TGGGCCAAATTGTTTCCGAA+CGG + chr5_1:7447236-7447255 Msa0714690:CDS 45.0%
TGTTTCCGAACGGTAAGTAC+TGG + chr5_1:7447246-7447265 Msa0714690:intron 45.0%
!! TGCCGACTTATAGGTACTCA+AGG + chr5_1:7447329-7447348 Msa0714690:intron 45.0%
GTTGAAGACAAATCCTCTGG+TGG + chr5_1:7447390-7447409 Msa0714690:CDS 45.0%
GAGAGTAGTGACTCAGAGAA+TGG + chr5_1:7447501-7447520 Msa0714690:CDS 45.0%
CCCACCTAAAACTAAACCAG+TGG + chr5_1:7447560-7447579 Msa0714690:CDS 45.0%
!!! CCCACTGGTTTAGTTTTAGG+TGG - chr5_1:7447564-7447583 None:intergenic 45.0%
ACTAAACCAGTGGGGAAAAG+TGG + chr5_1:7447570-7447589 Msa0714690:CDS 45.0%
ATGCCAGACCTTGACCATTT+GGG - chr5_1:7448353-7448372 None:intergenic 45.0%
AATGCCAGACCTTGACCATT+TGG - chr5_1:7448354-7448373 None:intergenic 45.0%
TCAAGGTCTGGCATTTCTCT+AGG + chr5_1:7448359-7448378 Msa0714690:intron 45.0%
TAAAAGGAGCCAAGAGAGAG+AGG + chr5_1:7448392-7448411 Msa0714690:intron 45.0%
AGCCAAGAGAGAGAGGATAT+GGG + chr5_1:7448399-7448418 Msa0714690:intron 45.0%
TTCCCATATCCTCTCTCTCT+TGG - chr5_1:7448404-7448423 None:intergenic 45.0%
TAGAGAACTTGCCCTTGCTT+GGG + chr5_1:7448474-7448493 Msa0714690:intron 45.0%
CACCACAATGCCTTTGTTCT+TGG + chr5_1:7448627-7448646 Msa0714690:intron 45.0%
CCACAATGCCTTTGTTCTTG+GGG + chr5_1:7448629-7448648 Msa0714690:intron 45.0%
TTGTGTCTCCCCAAGAACAA+AGG - chr5_1:7448640-7448659 None:intergenic 45.0%
GACTTGGACATTTGAGCCTA+TGG - chr5_1:7448777-7448796 None:intergenic 45.0%
!! TTACCACCTAGAGGTATCCT+AGG - chr5_1:7448799-7448818 None:intergenic 45.0%
CCCTTCTTTATATAGGGGTG+TGG + chr5_1:7448857-7448876 Msa0714690:intron 45.0%
CCCACACCCCTATATAAAGA+AGG - chr5_1:7448861-7448880 None:intergenic 45.0%
! TTTATATAGGGGTGTGGGGT+GGG + chr5_1:7448863-7448882 Msa0714690:intron 45.0%
GGCTGCTACAACTGATATAG+CGG + chr5_1:7449072-7449091 Msa0714690:intron 45.0%
CTACAACTGATATAGCGGTG+CGG + chr5_1:7449077-7449096 Msa0714690:intron 45.0%
GTGAAGAAAAAGAGCAGGAC+AGG + chr5_1:7449337-7449356 Msa0714690:intron 45.0%
!! GGTATTGGTCCCTGCAAAAT+AGG + chr5_1:7449624-7449643 Msa0714690:intron 45.0%
!! GGTATTGGTCCCTGCAAAAT+AGG + chr5_1:7449624-7449643 Msa0714690:intron 45.0%
!! CCAAAACTGGCCTATTTTGC+AGG - chr5_1:7450171-7450190 None:intergenic 45.0%
! CCTGCAAAATAGGCCAGTTT+TGG + chr5_1:7449666-7449685 Msa0714690:intron 45.0%
GCAGGGACTAAAACCAAAAC+TGG - chr5_1:7450097-7450116 None:intergenic 45.0%
GCAGGGACTAAAACCAAAAC+TGG - chr5_1:7450097-7450116 None:intergenic 45.0%
ATCATCACATAACTGGGGTC+AGG + chr5_1:7450019-7450038 Msa0714690:intron 45.0%
TCATCACATAACTGGGGTCA+GGG + chr5_1:7450020-7450039 Msa0714690:intron 45.0%
GCAGGGACTAAAACCAAAAC+TGG + chr5_1:7450097-7450116 Msa0714690:intron 45.0%
GCAGGGACTAAAACCAAAAC+TGG + chr5_1:7450097-7450116 Msa0714690:intron 45.0%
! CCTGCAAAATAGGCCAGTTT+TGG - chr5_1:7449666-7449685 None:intergenic 45.0%
!! CCAAAACTGGCCTATTTTGC+AGG + chr5_1:7450171-7450190 Msa0714690:intron 45.0%
!! GGTATTGGTCCCTGCAAAAT+AGG - chr5_1:7449624-7449643 None:intergenic 45.0%
ACCCAAAAAATGGTGTGGCA+CGG - chr5_1:7450321-7450340 None:intergenic 45.0%
!!! TGCCACACCATTTTTTGGGT+TGG + chr5_1:7450321-7450340 Msa0714690:intron 45.0%
TGGTTATCAATGCGGGATTG+TGG - chr5_1:7450352-7450371 None:intergenic 45.0%
! CAATCCCGCATTGATAACCA+TGG + chr5_1:7450352-7450371 Msa0714690:intron 45.0%
CCCAACACATTCTCTCGAAT+TGG + chr5_1:7450612-7450631 Msa0714690:intron 45.0%
TGTGAAGAAGGGAAGTTGTC+TGG + chr5_1:7450930-7450949 Msa0714690:CDS 45.0%
!! GGAAGTTGTCTGGTTCTACT+GGG + chr5_1:7450940-7450959 Msa0714690:CDS 45.0%
!! GAAGTTGTCTGGTTCTACTG+GGG + chr5_1:7450941-7450960 Msa0714690:CDS 45.0%
GGATGCTACAAATTCTCTCG+TGG + chr5_1:7450962-7450981 Msa0714690:CDS 45.0%
GCTACAAATTCTCTCGTGGA+AGG + chr5_1:7450966-7450985 Msa0714690:CDS 45.0%
ATGATAGGCAGCAGATTTCC+AGG - chr5_1:7451172-7451191 None:intergenic 45.0%
CTGCTGCCTATCATTCAATC+AGG + chr5_1:7451178-7451197 Msa0714690:CDS 45.0%
ATGCCAATCAGCTTGTGGAA+AGG + chr5_1:7451254-7451273 Msa0714690:CDS 45.0%
ACTCCTTTCCACAAGCTGAT+TGG - chr5_1:7451260-7451279 None:intergenic 45.0%
AGCATGGACATTGACGACTT+CGG - chr5_1:7451569-7451588 None:intergenic 45.0%
TCCATGCTTTGCTGCAGATA+GGG + chr5_1:7451581-7451600 Msa0714690:CDS 45.0%
TTTGTAGGAACTGTTGGGTC+AGG + chr5_1:7451619-7451638 Msa0714690:CDS 45.0%
AGAGTAGAAGTAAGAGTGGG+AGG - chr5_1:7452045-7452064 None:intergenic 45.0%
GTAGAGCTGATTGGGATGAA+AGG + chr5_1:7452103-7452122 Msa0714690:intron 45.0%
GGTCTGCCAATGTTAACTGA+TGG + chr5_1:7452284-7452303 Msa0714690:intron 45.0%
CTTGGGATTCCTAGTCAAAG+AGG + chr5_1:7452517-7452536 Msa0714690:CDS 45.0%
TGGGATTCCTAGTCAAAGAG+GGG + chr5_1:7452519-7452538 Msa0714690:CDS 45.0%
TAATTAAAACCGGACCGGAC+CGG + chr5_1:7452859-7452878 Msa0714690:intron 45.0%
!! TTTTGACCGGTTCCTGTACT+TGG - chr5_1:7452933-7452952 None:intergenic 45.0%
TACAGGAACCGGTCAAAAAC+CGG + chr5_1:7452935-7452954 Msa0714690:intron 45.0%
CCGGTCAAAAACCGGAAAAT+TGG + chr5_1:7452943-7452962 Msa0714690:intron 45.0%
GGATAAAACTGGAAAACCGG+CGG + chr5_1:7452976-7452995 Msa0714690:intron 45.0%
CCGCACAACAATATGGGATT+AGG + chr5_1:7453224-7453243 Msa0714690:intron 45.0%
TGGGTTCAAGGTTTAGAGGT+CGG - chr5_1:7453694-7453713 None:intergenic 45.0%
CTCATGGGTTCAAGGTTTAG+AGG - chr5_1:7453698-7453717 None:intergenic 45.0%
CATTGAACCGGTGAACTCAT+GGG - chr5_1:7453713-7453732 None:intergenic 45.0%
ACATTGAACCGGTGAACTCA+TGG - chr5_1:7453714-7453733 None:intergenic 45.0%
TCGGTGAGAAATCAACTCTC+CGG - chr5_1:7454036-7454055 None:intergenic 45.0%
TTCCTCGCTTATCTGCTTCT+CGG - chr5_1:7454055-7454074 None:intergenic 45.0%
! GTTGATGGAGATCATAGGGT+AGG + chr5_1:7454398-7454417 Msa0714690:CDS 45.0%
!! GCTAAGGAACGGATTAATGC+TGG + chr5_1:7454428-7454447 Msa0714690:CDS 45.0%
!!! CCGTCTTCTTTTTTCGATCC+AGG - chr5_1:7454524-7454543 None:intergenic 45.0%
TTCTTTGCACGACCACTTGA+AGG - chr5_1:7454551-7454570 None:intergenic 45.0%
TTGGCATTAGCTATCCCAGA+TGG + chr5_1:7454750-7454769 Msa0714690:three_prime_UTR 45.0%
! CGTGTAATCCTTTTTCCCGA+AGG + chr5_1:7454801-7454820 Msa0714690:three_prime_UTR 45.0%
TGCATTTGCTCATTCCCCTT+CGG - chr5_1:7454820-7454839 None:intergenic 45.0%
!!! TCATTATTTTTTTTTTTTTT+TGG + chr5_1:7450416-7450435 Msa0714690:intron 5.0%
TAAAGTGACAGGGAATGCGG+GGG - chr5_1:7440947-7440966 None:intergenic 50.0%
GTAAAGTGACAGGGAATGCG+GGG - chr5_1:7440948-7440967 None:intergenic 50.0%
GGTAAAGTGACAGGGAATGC+GGG - chr5_1:7440949-7440968 None:intergenic 50.0%
GGGTAAAGTGACAGGGAATG+CGG - chr5_1:7440950-7440969 None:intergenic 50.0%
GAAGAAGAAGACGGAGAAGG+CGG - chr5_1:7441194-7441213 None:intergenic 50.0%
CTGGAAGAAGAAGACGGAGA+AGG - chr5_1:7441197-7441216 None:intergenic 50.0%
CCAGATATGGAAATCGTCGG+CGG + chr5_1:7442393-7442412 Msa0714690:CDS 50.0%
GGCATTGCCGATACAGATAG+AGG + chr5_1:7442427-7442446 Msa0714690:CDS 50.0%
TGCCGATACAGATAGAGGTC+TGG + chr5_1:7442432-7442451 Msa0714690:CDS 50.0%
! GTTCGTGCCGGTAATGATGA+TGG + chr5_1:7442502-7442521 Msa0714690:CDS 50.0%
! TCGTGCCGGTAATGATGATG+GGG + chr5_1:7442504-7442523 Msa0714690:CDS 50.0%
GCTCTCCCCATCATCATTAC+CGG - chr5_1:7442512-7442531 None:intergenic 50.0%
!! GAAGTACTGCCGTAGAACCA+TGG - chr5_1:7442555-7442574 None:intergenic 50.0%
GGTTCTACGGCAGTACTTCT+AGG + chr5_1:7442556-7442575 Msa0714690:CDS 50.0%
TGACCTAGGTGGTGCTTATG+AGG + chr5_1:7442839-7442858 Msa0714690:intron 50.0%
AAGCCTCATAAGCACCACCT+AGG - chr5_1:7442845-7442864 None:intergenic 50.0%
AGGTGGTGCTTATGAGGCTT+TGG + chr5_1:7442845-7442864 Msa0714690:intron 50.0%
GGTGGTGCTTATGAGGCTTT+GGG + chr5_1:7442846-7442865 Msa0714690:intron 50.0%
AGTGAGGCCACAAATGCAAG+TGG - chr5_1:7442972-7442991 None:intergenic 50.0%
AAAACTGCACACCTGGAGTG+AGG - chr5_1:7442988-7443007 None:intergenic 50.0%
CAGTCTCAAAACTGCACACC+TGG - chr5_1:7442995-7443014 None:intergenic 50.0%
!!! GGTGTGCAGTTTTGAGACTG+AGG + chr5_1:7442995-7443014 Msa0714690:intron 50.0%
ACTCTCCCTCACGATAAGAC+TGG - chr5_1:7443071-7443090 None:intergenic 50.0%
TGTCATCTCACTAGGCGATG+TGG - chr5_1:7443104-7443123 None:intergenic 50.0%
TCACCATGGACCACCTATGA+AGG - chr5_1:7443383-7443402 None:intergenic 50.0%
AACAAATGTGGGGATGGGGT+TGG - chr5_1:7443516-7443535 None:intergenic 50.0%
AACCCCATCCCCACATTTGT+TGG + chr5_1:7443515-7443534 Msa0714690:intron 50.0%
ACCCCATCCCCACATTTGTT+GGG + chr5_1:7443516-7443535 Msa0714690:intron 50.0%
ACCCCAACAAATGTGGGGAT+GGG - chr5_1:7443521-7443540 None:intergenic 50.0%
GGTGTAGACCCCAACAAATG+TGG - chr5_1:7443528-7443547 None:intergenic 50.0%
ACAACAACCAGAACACGGCA+AGG - chr5_1:7443589-7443608 None:intergenic 50.0%
! GCAGTCTATGCCACTTCTAG+TGG + chr5_1:7444366-7444385 Msa0714690:intron 50.0%
GAGTTTCCCGTCGGATTTGT+TGG - chr5_1:7445180-7445199 None:intergenic 50.0%
TATTTGCAGCGACAGTGAGG+AGG + chr5_1:7445711-7445730 Msa0714690:CDS 50.0%
CACGACATCGGCGACAAAAT+AGG - chr5_1:7446965-7446984 None:intergenic 50.0%
CTCTCAGGATCTTGTCTTCC+CGG + chr5_1:7447096-7447115 Msa0714690:CDS 50.0%
GTGTTAGGAGGAGTCCACAA+AGG - chr5_1:7447201-7447220 None:intergenic 50.0%
CGGAAACAATTTGGCCCACA+TGG - chr5_1:7447234-7447253 None:intergenic 50.0%
!! GCTCATGCTTGCCGACTTAT+AGG + chr5_1:7447320-7447339 Msa0714690:intron 50.0%
AGTGACTCAGAGAATGGTCC+TGG + chr5_1:7447507-7447526 Msa0714690:CDS 50.0%
ACTCAGAGAATGGTCCTGGA+CGG + chr5_1:7447511-7447530 Msa0714690:CDS 50.0%
!!! AGTTTTAGGTGGGGCTGAGT+GGG - chr5_1:7447553-7447572 None:intergenic 50.0%
!!! TAGTTTTAGGTGGGGCTGAG+TGG - chr5_1:7447554-7447573 None:intergenic 50.0%
!! CCAATTCCACTTTTCCCCAC+TGG - chr5_1:7447579-7447598 None:intergenic 50.0%
CCAGTGGGGAAAAGTGGAAT+TGG + chr5_1:7447576-7447595 Msa0714690:CDS 50.0%
TCTGACCCACATGTTACGAG+TGG + chr5_1:7447880-7447899 Msa0714690:CDS 50.0%
CTGACCCACATGTTACGAGT+GGG + chr5_1:7447881-7447900 Msa0714690:CDS 50.0%
TGACCCACATGTTACGAGTG+GGG + chr5_1:7447882-7447901 Msa0714690:CDS 50.0%
CTTCCCCACTCGTAACATGT+GGG - chr5_1:7447888-7447907 None:intergenic 50.0%
TCTTCCCCACTCGTAACATG+TGG - chr5_1:7447889-7447908 None:intergenic 50.0%
TTTGCACTGGAAGGCCCAAA+TGG + chr5_1:7448336-7448355 Msa0714690:intron 50.0%
! GGTCTGGCATTTCTCTAGGA+AGG + chr5_1:7448363-7448382 Msa0714690:intron 50.0%
GAGCCAAGAGAGAGAGGATA+TGG + chr5_1:7448398-7448417 Msa0714690:intron 50.0%
CAAGCAAGGGCAAGTTCTCT+AGG - chr5_1:7448475-7448494 None:intergenic 50.0%
CTAGAGAACTTGCCCTTGCT+TGG + chr5_1:7448473-7448492 Msa0714690:intron 50.0%
AGAGAACTTGCCCTTGCTTG+GGG + chr5_1:7448475-7448494 Msa0714690:intron 50.0%
!! CCCCAAGAACAAAGGCATTG+TGG - chr5_1:7448632-7448651 None:intergenic 50.0%
CAATAGCTGTGAACCCCTCA+GGG + chr5_1:7448744-7448763 Msa0714690:intron 50.0%
GGCTCAAATGTCCAAGTCCT+AGG + chr5_1:7448779-7448798 Msa0714690:intron 50.0%
!! CCTAGAGGTATCCTAGGACT+TGG - chr5_1:7448793-7448812 None:intergenic 50.0%
CCAAGTCCTAGGATACCTCT+AGG + chr5_1:7448790-7448809 Msa0714690:intron 50.0%
AGTCCTAGGATACCTCTAGG+TGG + chr5_1:7448793-7448812 Msa0714690:intron 50.0%
GTGGTAATTAGTAGGAGGGG+AGG + chr5_1:7448812-7448831 Msa0714690:intron 50.0%
! CTTTATATAGGGGTGTGGGG+TGG + chr5_1:7448862-7448881 Msa0714690:intron 50.0%
! TTATATAGGGGTGTGGGGTG+GGG + chr5_1:7448864-7448883 Msa0714690:intron 50.0%
AGAGTCTAGAGAACTCGCTC+TGG + chr5_1:7448930-7448949 Msa0714690:intron 50.0%
CTGGGATATCTCGACCAAAG+CGG - chr5_1:7449126-7449145 None:intergenic 50.0%
!!! TCCCGTGCCACACCATTTTT+TGG + chr5_1:7450316-7450335 Msa0714690:intron 50.0%
CCCAAAAAATGGTGTGGCAC+GGG - chr5_1:7450320-7450339 None:intergenic 50.0%
!!! CCCGTGCCACACCATTTTTT+GGG + chr5_1:7450317-7450336 Msa0714690:intron 50.0%
GGCCAACCCAAAAAATGGTG+TGG - chr5_1:7450326-7450345 None:intergenic 50.0%
!! CACGTCTGCAAGGGTGTTTA+AGG + chr5_1:7450385-7450404 Msa0714690:intron 50.0%
GCATCGGACAAGTCATAAGC+GGG - chr5_1:7450516-7450535 None:intergenic 50.0%
! GGCATCGGACAAGTCATAAG+CGG - chr5_1:7450517-7450536 None:intergenic 50.0%
TGGGGGCCTAGATGATTTAG+TGG + chr5_1:7450667-7450686 Msa0714690:intron 50.0%
ATTGCAGCTGCCTAATAGCC+AGG + chr5_1:7450856-7450875 Msa0714690:intron 50.0%
!! GGGAAGTTGTCTGGTTCTAC+TGG + chr5_1:7450939-7450958 Msa0714690:CDS 50.0%
TCTCGTGGAAGGCTATTCCA+AGG + chr5_1:7450977-7450996 Msa0714690:CDS 50.0%
! CATGGATTGTACTGTCGGCA+GGG - chr5_1:7451231-7451250 None:intergenic 50.0%
! ACATGGATTGTACTGTCGGC+AGG - chr5_1:7451232-7451251 None:intergenic 50.0%
TGCCGACAGTACAATCCATG+TGG + chr5_1:7451231-7451250 Msa0714690:CDS 50.0%
CAAGCTGATTGGCATCCACA+TGG - chr5_1:7451249-7451268 None:intergenic 50.0%
TGTGGATGCCAATCAGCTTG+TGG + chr5_1:7451249-7451268 Msa0714690:CDS 50.0%
!! ACCTGCTGTGAGAAGTACTG+TGG + chr5_1:7451300-7451319 Msa0714690:CDS 50.0%
!! CCTGCTGTGAGAAGTACTGT+GGG + chr5_1:7451301-7451320 Msa0714690:CDS 50.0%
TGTCTTGTCTCGTGCCTAGA+TGG + chr5_1:7451361-7451380 Msa0714690:intron 50.0%
GTCCATGCTTTGCTGCAGAT+AGG + chr5_1:7451580-7451599 Msa0714690:CDS 50.0%
TCCCTATCTGCAGCAAAGCA+TGG - chr5_1:7451585-7451604 None:intergenic 50.0%
TATTGTAGCAGCTGTGGCGA+TGG + chr5_1:7452490-7452509 Msa0714690:intron 50.0%
TGCTAGAAACCGCCAAGTAC+AGG + chr5_1:7452918-7452937 Msa0714690:intron 50.0%
AAACCGCCAAGTACAGGAAC+CGG + chr5_1:7452924-7452943 Msa0714690:intron 50.0%
AAACTGGAAAACCGGCGGTT+TGG + chr5_1:7452981-7453000 Msa0714690:intron 50.0%
TAGGCAGCCGCACAACAATA+TGG + chr5_1:7453217-7453236 Msa0714690:intron 50.0%
AGGCAGCCGCACAACAATAT+GGG + chr5_1:7453218-7453237 Msa0714690:intron 50.0%
AAGGTTTAGAGGTCGGACCA+GGG - chr5_1:7453687-7453706 None:intergenic 50.0%
CCTTGAACCCATGAGTTCAC+CGG + chr5_1:7453703-7453722 Msa0714690:intron 50.0%
!! GAGTTCACCGGTTCAATGTC+TGG + chr5_1:7453715-7453734 Msa0714690:intron 50.0%
AACCGGACCAGACATTGAAC+CGG - chr5_1:7453725-7453744 None:intergenic 50.0%
! GCCTTCAGGTTCTTCTTGGA+CGG + chr5_1:7453836-7453855 Msa0714690:intron 50.0%
ACCGTCCAAGAAGAACCTGA+AGG - chr5_1:7453840-7453859 None:intergenic 50.0%
ACTCTCCGGTATACTCTCCA+AGG - chr5_1:7454022-7454041 None:intergenic 50.0%
GAGCTCTATCGGGCTCATAA+CGG - chr5_1:7454475-7454494 None:intergenic 50.0%
!!! TTTTTCGATCCAGGGGCATC+TGG - chr5_1:7454515-7454534 None:intergenic 50.0%
CTCATTCCCCTTCGGGAAAA+AGG - chr5_1:7454812-7454831 None:intergenic 50.0%
GCATTTGCTCATTCCCCTTC+GGG - chr5_1:7454819-7454838 None:intergenic 50.0%
ATGGTAGGTGGCAATGACGG+TGG - chr5_1:7441152-7441171 None:intergenic 55.0%
ACCGTCATTGCCACCTACCA+TGG + chr5_1:7441151-7441170 Msa0714690:exon 55.0%
GCCATGGTAGGTGGCAATGA+CGG - chr5_1:7441155-7441174 None:intergenic 55.0%
GAGTTTGACGCCATGGTAGG+TGG - chr5_1:7441164-7441183 None:intergenic 55.0%
GGAGAGTTTGACGCCATGGT+AGG - chr5_1:7441167-7441186 None:intergenic 55.0%
ATACGGAAGGATCGAGCGGA+GGG - chr5_1:7441226-7441245 None:intergenic 55.0%
TATACGGAAGGATCGAGCGG+AGG - chr5_1:7441227-7441246 None:intergenic 55.0%
GCGTTAAACGCGCGTGCATT+TGG + chr5_1:7442318-7442337 Msa0714690:intron 55.0%
CCGCCGACGATTTCCATATC+TGG - chr5_1:7442396-7442415 None:intergenic 55.0%
TATGGAAATCGTCGGCGGAG+AGG + chr5_1:7442398-7442417 Msa0714690:CDS 55.0%
ACGGCAAAACGAACCTGTCC+AGG - chr5_1:7442666-7442685 None:intergenic 55.0%
TGCATTTGTGGCCTCACTCC+AGG + chr5_1:7442974-7442993 Msa0714690:intron 55.0%
CCATGGACCACCTATGAAGG+TGG - chr5_1:7443380-7443399 None:intergenic 55.0%
CCACCTTCATAGGTGGTCCA+TGG + chr5_1:7443377-7443396 Msa0714690:intron 55.0%
!! GATGGGGTTGGTCAGAGAGA+GGG - chr5_1:7443504-7443523 None:intergenic 55.0%
CCCCAACAAATGTGGGGATG+GGG - chr5_1:7443520-7443539 None:intergenic 55.0%
! CCCCATCCCCACATTTGTTG+GGG + chr5_1:7443517-7443536 Msa0714690:intron 55.0%
GACCCCAACAAATGTGGGGA+TGG - chr5_1:7443522-7443541 None:intergenic 55.0%
ACACGGCAAGGAAGCGATGA+AGG - chr5_1:7443577-7443596 None:intergenic 55.0%
ATCGCTTCCTTGCCGTGTTC+TGG + chr5_1:7443579-7443598 Msa0714690:intron 55.0%
GTAGCCTGCAGAACCATCAC+TGG + chr5_1:7443611-7443630 Msa0714690:intron 55.0%
TCCTTCCCGCCGAACCAATT+TGG + chr5_1:7444233-7444252 Msa0714690:intron 55.0%
!! ACCAAATTGGTTCGGCGGGA+AGG - chr5_1:7444237-7444256 None:intergenic 55.0%
TGCTCTTGGACTCCTTGCTG+AGG + chr5_1:7444921-7444940 Msa0714690:intron 55.0%
CAGGATCTTGTCTTCCCGGT+AGG + chr5_1:7447100-7447119 Msa0714690:intron 55.0%
AGGCTGAGAGGCAACCTTTG+TGG + chr5_1:7447184-7447203 Msa0714690:intron 55.0%
! CCTAGATAGAGCACCACCAG+AGG - chr5_1:7447406-7447425 None:intergenic 55.0%
! CCTCTGGTGGTGCTCTATCT+AGG + chr5_1:7447403-7447422 Msa0714690:CDS 55.0%
CTCAGAGAATGGTCCTGGAC+GGG + chr5_1:7447512-7447531 Msa0714690:CDS 55.0%
CTGGAAGGCCCAAATGGTCA+AGG + chr5_1:7448342-7448361 Msa0714690:intron 55.0%
AGGCCCAAATGGTCAAGGTC+TGG + chr5_1:7448347-7448366 Msa0714690:intron 55.0%
GAGAACTTGCCCTTGCTTGG+GGG + chr5_1:7448476-7448495 Msa0714690:intron 55.0%
CCTGAGGGGTTCACAGCTAT+TGG - chr5_1:7448746-7448765 None:intergenic 55.0%
CCAATAGCTGTGAACCCCTC+AGG + chr5_1:7448743-7448762 Msa0714690:intron 55.0%
CTATGGGCGTAAACCCTGAG+GGG - chr5_1:7448760-7448779 None:intergenic 55.0%
CCTATGGGCGTAAACCCTGA+GGG - chr5_1:7448761-7448780 None:intergenic 55.0%
! TATATAGGGGTGTGGGGTGG+GGG + chr5_1:7448865-7448884 Msa0714690:intron 55.0%
CTAGAGAACTCGCTCTGGCT+TGG + chr5_1:7448935-7448954 Msa0714690:intron 55.0%
ACTGATATAGCGGTGCGGAG+CGG + chr5_1:7449082-7449101 Msa0714690:intron 55.0%
!! TATCGTGGTGGATCAGCGCT+GGG - chr5_1:7449144-7449163 None:intergenic 55.0%
!! ATATCGTGGTGGATCAGCGC+TGG - chr5_1:7449145-7449164 None:intergenic 55.0%
! CATGTGTGATGTGGTGGGAG+CGG - chr5_1:7449171-7449190 None:intergenic 55.0%
ATCAATGCGGGATTGTGGCG+CGG - chr5_1:7450347-7450366 None:intergenic 55.0%
CCCACAGTACTTCTCACAGC+AGG - chr5_1:7451304-7451323 None:intergenic 55.0%
TTCTAGCAGTGACCGGACAC+AGG - chr5_1:7452906-7452925 None:intergenic 55.0%
!! TGGCGGTTTCTAGCAGTGAC+CGG - chr5_1:7452913-7452932 None:intergenic 55.0%
! TGACCGGTTCCTGTACTTGG+CGG - chr5_1:7452930-7452949 None:intergenic 55.0%
CATACAACCAGCCAAACCGC+CGG - chr5_1:7452995-7453014 None:intergenic 55.0%
! GGCGGTTTGGCTGGTTGTAT+GGG + chr5_1:7452994-7453013 Msa0714690:intron 55.0%
CAAGGTTTAGAGGTCGGACC+AGG - chr5_1:7453688-7453707 None:intergenic 55.0%
CCGGTGAACTCATGGGTTCA+AGG - chr5_1:7453706-7453725 None:intergenic 55.0%
!! CACCGGTTCAATGTCTGGTC+CGG + chr5_1:7453720-7453739 Msa0714690:intron 55.0%
CTTGGACGGTCTGATGTGTC+TGG + chr5_1:7453850-7453869 Msa0714690:CDS 55.0%
ACGGTCTGATGTGTCTGGCT+GGG + chr5_1:7453855-7453874 Msa0714690:CDS 55.0%
TGGCTGGGGAGCCTTCTTAA+AGG + chr5_1:7453870-7453889 Msa0714690:CDS 55.0%
CACCGAGAAGCAGATAAGCG+AGG + chr5_1:7454050-7454069 Msa0714690:intron 55.0%
!! GGAACGGATTAATGCTGGCG+AGG + chr5_1:7454433-7454452 Msa0714690:CDS 55.0%
AGCCCAAGCAGGAGCTCTAT+CGG - chr5_1:7454486-7454505 None:intergenic 55.0%
GAAGACGGTGCTCCTTCAAG+TGG + chr5_1:7454536-7454555 Msa0714690:CDS 55.0%
GGAATGCGGGGGAAGAGTCA+TGG - chr5_1:7440936-7440955 None:intergenic 60.0%
AGGCGGAGAGTTTGACGCCA+TGG - chr5_1:7441171-7441190 None:intergenic 60.0%
GAAGAAGACGGAGAAGGCGG+AGG - chr5_1:7441191-7441210 None:intergenic 60.0%
!! GGATGGGGTTGGTCAGAGAG+AGG - chr5_1:7443505-7443524 None:intergenic 60.0%
CGGCAAGGAAGCGATGAAGG+TGG - chr5_1:7443574-7443593 None:intergenic 60.0%
CGGGAAGGATGTGACACTGG+TGG - chr5_1:7444222-7444241 None:intergenic 60.0%
CGAGTGGGGAAGACAACACG+AGG + chr5_1:7447896-7447915 Msa0714690:CDS 60.0%
AGGGTCAAGCCCCCAAGCAA+GGG - chr5_1:7448488-7448507 None:intergenic 60.0%
AAGGGTCAAGCCCCCAAGCA+AGG - chr5_1:7448489-7448508 None:intergenic 60.0%
CCCTCAGGGTTTACGCCCAT+AGG + chr5_1:7448758-7448777 Msa0714690:intron 60.0%
GCCTATGGGCGTAAACCCTG+AGG - chr5_1:7448762-7448781 None:intergenic 60.0%
! ATATAGGGGTGTGGGGTGGG+GGG + chr5_1:7448866-7448885 Msa0714690:intron 60.0%
TGGGGTGGGGGGAGTGAATA+CGG + chr5_1:7448877-7448896 Msa0714690:intron 60.0%
!! GAGAACTCGCTCTGGCTTGG+AGG + chr5_1:7448938-7448957 Msa0714690:intron 60.0%
GATGGGTGATGCAGCCGCTT+TGG + chr5_1:7449109-7449128 Msa0714690:intron 60.0%
GGGAGCGGATGATATCGTGG+TGG - chr5_1:7449156-7449175 None:intergenic 60.0%
GGTGGGAGCGGATGATATCG+TGG - chr5_1:7449159-7449178 None:intergenic 60.0%
GGCGCGGCCAACCCAAAAAA+TGG - chr5_1:7450331-7450350 None:intergenic 60.0%
AGCTGTGGCGATGGCACTCT+TGG + chr5_1:7452499-7452518 Msa0714690:CDS 60.0%
GCTGTGGCGATGGCACTCTT+GGG + chr5_1:7452500-7452519 Msa0714690:CDS 60.0%
! TGGAAAACCGGCGGTTTGGC+TGG + chr5_1:7452985-7453004 Msa0714690:intron 60.0%
! CGGCGGTTTGGCTGGTTGTA+TGG + chr5_1:7452993-7453012 Msa0714690:intron 60.0%
GACGGTCTGATGTGTCTGGC+TGG + chr5_1:7453854-7453873 Msa0714690:CDS 60.0%
CGGTCTGATGTGTCTGGCTG+GGG + chr5_1:7453856-7453875 Msa0714690:CDS 60.0%
AGCCCGATAGAGCTCCTGCT+TGG + chr5_1:7454480-7454499 Msa0714690:CDS 60.0%
GCCCGATAGAGCTCCTGCTT+GGG + chr5_1:7454481-7454500 Msa0714690:CDS 60.0%
GCCCAAGCAGGAGCTCTATC+GGG - chr5_1:7454485-7454504 None:intergenic 60.0%
!! TCTGGCTTTCGAGCCCAAGC+AGG - chr5_1:7454497-7454516 None:intergenic 60.0%
GAAGACGGAGAAGGCGGAGG+CGG - chr5_1:7441188-7441207 None:intergenic 65.0%
ATCGAGCGGAGGGTCGGATC+TGG - chr5_1:7441216-7441235 None:intergenic 65.0%
GGAAGGATCGAGCGGAGGGT+CGG - chr5_1:7441222-7441241 None:intergenic 65.0%
CGGCGGGAAGGATGTGACAC+TGG - chr5_1:7444225-7444244 None:intergenic 65.0%
CCTGAAGCAGCATCCCGTCC+AGG - chr5_1:7447528-7447547 None:intergenic 65.0%
! CCTGGACGGGATGCTGCTTC+AGG + chr5_1:7447525-7447544 Msa0714690:CDS 65.0%
!! CTCGCTCTGGCTTGGAGGCT+TGG + chr5_1:7448943-7448962 Msa0714690:intron 65.0%
CGGTGCGGAGCGGTTCAGAT+GGG + chr5_1:7449092-7449111 Msa0714690:intron 65.0%
TAAAACCGGACCGGACCGGC+CGG + chr5_1:7452863-7452882 Msa0714690:intron 65.0%
GCAGTGACCGGACACAGGTC+CGG - chr5_1:7452901-7452920 None:intergenic 65.0%
GCTCGAAAGCCAGATGCCCC+TGG + chr5_1:7454503-7454522 Msa0714690:CDS 65.0%
TCGTCGGCGGAGAGGACGTG+TGG + chr5_1:7442406-7442425 Msa0714690:CDS 70.0%
GCGGTGCGGAGCGGTTCAGA+TGG + chr5_1:7449091-7449110 Msa0714690:intron 70.0%
TTGAACCGGCCGGTCCGGTC+CGG - chr5_1:7452871-7452890 None:intergenic 70.0%
! ACCGGACCGGCCGGTTCAAC+CGG + chr5_1:7452872-7452891 Msa0714690:intron 70.0%
ACCGGTTGAACCGGCCGGTC+CGG - chr5_1:7452876-7452895 None:intergenic 70.0%
! GGTCCGGCCACCGGTTGAAC+CGG - chr5_1:7452885-7452904 None:intergenic 70.0%
! GGACCGGCCGGTTCAACCGG+TGG + chr5_1:7452875-7452894 Msa0714690:intron 75.0%
! CGGCCACCGGTTGAACCGGC+CGG - chr5_1:7452881-7452900 None:intergenic 75.0%
! CGGCCGGTTCAACCGGTGGC+CGG + chr5_1:7452879-7452898 Msa0714690:intron 75.0%
CCGGACACAGGTCCGGCCAC+CGG - chr5_1:7452894-7452913 None:intergenic 75.0%
CCGGTGGCCGGACCTGTGTC+CGG + chr5_1:7452891-7452910 Msa0714690:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 7440929 7454913 7440929 ID=Msa0714690;Name=Msa0714690
chr5_1 mRNA 7440929 7454913 7440929 ID=Msa0714690-mRNA-1;Parent=Msa0714690;Name=Msa0714690-mRNA-1;_AED=0.12;_eAED=0.12;_QI=241|0.93|1|1|1|1|17|333|820
chr5_1 exon 7440929 7441241 7440929 ID=Msa0714690-mRNA-1:exon:3081;Parent=Msa0714690-mRNA-1
chr5_1 exon 7442133 7442234 7442133 ID=Msa0714690-mRNA-1:exon:3082;Parent=Msa0714690-mRNA-1
chr5_1 exon 7442349 7442671 7442349 ID=Msa0714690-mRNA-1:exon:3083;Parent=Msa0714690-mRNA-1
chr5_1 exon 7445633 7445794 7445633 ID=Msa0714690-mRNA-1:exon:3084;Parent=Msa0714690-mRNA-1
chr5_1 exon 7446577 7446661 7446577 ID=Msa0714690-mRNA-1:exon:3085;Parent=Msa0714690-mRNA-1
chr5_1 exon 7446828 7446983 7446828 ID=Msa0714690-mRNA-1:exon:3086;Parent=Msa0714690-mRNA-1
chr5_1 exon 7447070 7447117 7447070 ID=Msa0714690-mRNA-1:exon:3087;Parent=Msa0714690-mRNA-1
chr5_1 exon 7447186 7447257 7447186 ID=Msa0714690-mRNA-1:exon:3088;Parent=Msa0714690-mRNA-1
chr5_1 exon 7447342 7447689 7447342 ID=Msa0714690-mRNA-1:exon:3089;Parent=Msa0714690-mRNA-1
chr5_1 exon 7447844 7448034 7447844 ID=Msa0714690-mRNA-1:exon:3090;Parent=Msa0714690-mRNA-1
chr5_1 exon 7450863 7450998 7450863 ID=Msa0714690-mRNA-1:exon:3091;Parent=Msa0714690-mRNA-1
chr5_1 exon 7451099 7451322 7451099 ID=Msa0714690-mRNA-1:exon:3092;Parent=Msa0714690-mRNA-1
chr5_1 exon 7451509 7451640 7451509 ID=Msa0714690-mRNA-1:exon:3093;Parent=Msa0714690-mRNA-1
chr5_1 exon 7452498 7452591 7452498 ID=Msa0714690-mRNA-1:exon:3094;Parent=Msa0714690-mRNA-1
chr5_1 exon 7453844 7453891 7453844 ID=Msa0714690-mRNA-1:exon:3095;Parent=Msa0714690-mRNA-1
chr5_1 exon 7454215 7454292 7454215 ID=Msa0714690-mRNA-1:exon:3096;Parent=Msa0714690-mRNA-1
chr5_1 exon 7454389 7454913 7454389 ID=Msa0714690-mRNA-1:exon:3097;Parent=Msa0714690-mRNA-1
chr5_1 five_prime_UTR 7440929 7441169 7440929 ID=Msa0714690-mRNA-1:five_prime_utr;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7441170 7441241 7441170 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7442133 7442234 7442133 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7442349 7442671 7442349 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7445633 7445794 7445633 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7446577 7446661 7446577 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7446828 7446983 7446828 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7447070 7447117 7447070 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7447186 7447257 7447186 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7447342 7447689 7447342 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7447844 7448034 7447844 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7450863 7450998 7450863 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7451099 7451322 7451099 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7451509 7451640 7451509 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7452498 7452591 7452498 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7453844 7453891 7453844 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7454215 7454292 7454215 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 CDS 7454389 7454580 7454389 ID=Msa0714690-mRNA-1:cds;Parent=Msa0714690-mRNA-1
chr5_1 three_prime_UTR 7454581 7454913 7454581 ID=Msa0714690-mRNA-1:three_prime_utr;Parent=Msa0714690-mRNA-1
Gene Sequence

>Msa0714690

ATGGCGTCAAACTCTCCGCCTCCGCCTTCTCCGTCTTCTTCTTCCAGATCCGACCCTCCGCTCGATCCTTCCACAAAGAAAGTGGAGGAAACAAGTCCTGCAGTTAAAGACGTGTTAGCGGTTATTGAATCTTTGAAGAAGCAAGTTGCTGCGAAACGAATTGTTACGGTTAAGAATAGAGTGAAGGAAAATAGACAGAAGCTGATTGCTATAACTAACCAGATATGGAAATCGTCGGCGGAGAGGACGTGTGGCATTGCCGATACAGATAGAGGTCTGGATTTGCTGAGTAAGAGGCAAAAAGAAGCAATTGACATGCATAATGGTGTTCGTGCCGGTAATGATGATGGGGAGAGCAATGGTTATAATGGAGATGACCATGGTTCTACGGCAGTACTTCTAGGATCTAATTATGCTGTAAAGAATGCTGTTCGGCCTATTAAATTACCTGAAGTAAAAAGATTGCCTCCTTACACTACATGGATTTTCCTGGACAGAAATCAAAGAATGACAGAGGATCAATCAGTATTAGGTCGGAGGCGAATTTATTATGATCAAAATGGTGGTGAAGCACTTATTTGCAGCGACAGTGAGGAGGAACTAATTGACGAAGAAGAGGAAAAAAGAGAATTTGTAGAATCAGAAGATTTTATACTTCGCATGACTATCAGAGAATTTGGTTTATCTGATGTTGTTTTGGAGATCCTGGCTCAGTGCTTTTCTAGAAAAACTAGTGACATTAAGGCCAGATATGAAACTTTTTGCAATGAAGACAATAGTGGCGAGGATTCTAAAAATGGAGATGCACAAGATAATTCCCAAATTGACGATTCTTTTCTGGAAAAGGATCTTGAAGCGGCTCTTGACTCTTTTGACAACCTATTTTGTCGCCGATGTCGTGTTTTCGATTGCAGATTACATGGATGCTCTCAGGATCTTGTCTTCCCGGCTGAGAGGCAACCTTTGTGGACTCCTCCTAACACTGAAGATGTACCATGTGGGCCAAATTGTTTCCGAACGGTACTCAAGGCAGAAAAAATGGCCAAAGTCACATCTACTCAGACTGATGTTGAAGACAAATCCTCTGGTGGTGCTCTATCTAGGAAAAAGTCTTCCGGTAGAAGACGTATAAAATGCAGCCAAAGTGAAAGTGCTTCATCTAATGCTAGGATCATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGGGATGCTGCTTCAGGCTCCCACTCAGCCCCACCTAAAACTAAACCAGTGGGGAAAAGTGGAATTGGTAAGAGAAACAGTAAGCGAGTGGCAGAACGCGTTCTAGTTTGCATGCAGAAACGGCAGAAGAAAACAGTAGCTTCTGATTCTGATTCCATTAGTGAAGCTCCTGACCGCTCATTGAATGATATGGTTTCTGACCCACATGTTACGAGTGGGGAAGACAACACGAGGAAAGAAGAATTTGTGGATGAAAGCATTTCAAAACAAGAATTGGCTGATAATAAATCTTGGAAAACTCTTGAAAAAGGGCTTTTAGAAAAAGGAATGGAGATTTTTGGCAAAAACAGCTGCCTAATAGCCAGGAATCTCTTAAATGGTCTAAAGACATGTTGGGATGTTTTCCAGTACATAAATTGTGAAGAAGGGAAGTTGTCTGGTTCTACTGGGGATGCTACAAATTCTCTCGTGGAAGGCTATTCCAAGGGTAATAATGAAGTGAGAAGAAGGTCAAAATTTTTACGTAGAAGGGGAAGAGTCCGTCGTTTAAAGTATACCTGGAAATCTGCTGCCTATCATTCAATCAGGAAAAGGATTACAGAGAGAAAGGATCAGCCCTGCCGACAGTACAATCCATGTGGATGCCAATCAGCTTGTGGAAAGGAGTGTCCTTGTCTTCTAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAGAGTTGTAAAAATCGATTTCGAGGCTGTCATTGTGCGAAGAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAACTGTTGGGTCAGCAGCTGTGGCGATGGCACTCTTGGGATTCCTAGTCAAAGAGGGGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAAGGTTCTTCTTGGACGGTCTGATGTGTCTGGCTGGGGAGCCTTCTTAAAGTTTGTTCTTGATGCTTATCGAAAGGGTGATAAATTGAAGTTTGCAAACCACTCTCCTGTTCCAAATTGTTACGCGAAGGTTATTATGGTTGATGGAGATCATAGGGTAGGAATATTTGCTAAGGAACGGATTAATGCTGGCGAGGAGCTGTTTTATGATTACCGTTATGAGCCCGATAGAGCTCCTGCTTGGGCTCGAAAGCCAGATGCCCCTGGATCGAAAAAAGAAGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA
Protein sequence

>Msa0714690

MASNSPPPPSPSSSSRSDPPLDPSTKKVEETSPAVKDVLAVIESLKKQVAAKRIVTVKNRVKENRQKLIAITNQIWKSSAERTCGIADTDRGLDLLSKRQKEAIDMHNGVRAGNDDGESNGYNGDDHGSTAVLLGSNYAVKNAVRPIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVLGRRRIYYDQNGGEALICSDSEEELIDEEEEKREFVESEDFILRMTIREFGLSDVVLEILAQCFSRKTSDIKARYETFCNEDNSGEDSKNGDAQDNSQIDDSFLEKDLEAALDSFDNLFCRRCRVFDCRLHGCSQDLVFPAERQPLWTPPNTEDVPCGPNCFRTVLKAEKMAKVTSTQTDVEDKSSGGALSRKKSSGRRRIKCSQSESASSNARIISESSDSENGPGRDAASGSHSAPPKTKPVGKSGIGKRNSKRVAERVLVCMQKRQKKTVASDSDSISEAPDRSLNDMVSDPHVTSGEDNTRKEEFVDESISKQELADNKSWKTLEKGLLEKGMEIFGKNSCLIARNLLNGLKTCWDVFQYINCEEGKLSGSTGDATNSLVEGYSKGNNEVRRRSKFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKECPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSSCGDGTLGIPSQRGDNYECRNMKLLLKQQQKVLLGRSDVSGWGAFLKFVLDAYRKGDKLKFANHSPVPNCYAKVIMVDGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPDAPGSKKEDGAPSSGRAKKLA*