Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715790 | XP_003611874.1 | 92.558 | 739 | 31 | 8 | 17 | 736 | 18 | 751 | 0.0 | 1162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715790 | sp|Q9SW80|BLH2_ARATH | 43.885 | 834 | 260 | 26 | 1 | 732 | 1 | 728 | 1.49e-159 | 482 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715790 | G7KAR9 | 92.558 | 739 | 31 | 8 | 17 | 736 | 18 | 751 | 0.0 | 1162 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0715790 | TF | HB-BELL |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715790 | MtrunA17_Chr5g0403251 | 92.558 | 739 | 31 | 8 | 17 | 736 | 18 | 751 | 0.0 | 1162 |
| Msa0715790 | MtrunA17_Chr8g0373801 | 51.543 | 875 | 239 | 36 | 1 | 734 | 1 | 831 | 0.0 | 638 |
| Msa0715790 | MtrunA17_Chr8g0387321 | 54.851 | 268 | 93 | 5 | 325 | 573 | 174 | 432 | 4.41e-85 | 281 |
| Msa0715790 | MtrunA17_Chr1g0155681 | 47.857 | 280 | 108 | 5 | 333 | 586 | 165 | 432 | 9.32e-76 | 256 |
| Msa0715790 | MtrunA17_Chr1g0177751 | 43.155 | 336 | 160 | 5 | 305 | 624 | 128 | 448 | 4.33e-71 | 244 |
| Msa0715790 | MtrunA17_Chr7g0267481 | 44.308 | 325 | 148 | 6 | 339 | 643 | 172 | 483 | 1.38e-69 | 241 |
| Msa0715790 | MtrunA17_Chr3g0141941 | 43.662 | 284 | 107 | 5 | 337 | 588 | 161 | 423 | 3.36e-67 | 230 |
| Msa0715790 | MtrunA17_Chr4g0025521 | 49.624 | 266 | 111 | 5 | 338 | 585 | 217 | 477 | 2.76e-64 | 227 |
| Msa0715790 | MtrunA17_Chr4g0008591 | 40.988 | 344 | 150 | 9 | 297 | 619 | 156 | 467 | 2.97e-63 | 222 |
| Msa0715790 | MtrunA17_Chr3g0141931 | 41.727 | 278 | 125 | 10 | 329 | 584 | 160 | 422 | 5.96e-57 | 200 |
| Msa0715790 | MtrunA17_Chr4g0028701 | 38.988 | 336 | 133 | 10 | 330 | 607 | 241 | 562 | 1.22e-56 | 205 |
| Msa0715790 | MtrunA17_Chr7g0240371 | 38.182 | 330 | 154 | 10 | 329 | 628 | 113 | 422 | 3.09e-55 | 197 |
| Msa0715790 | MtrunA17_Chr2g0327021 | 35.962 | 317 | 151 | 9 | 330 | 618 | 244 | 536 | 3.63e-48 | 180 |
| Msa0715790 | MtrunA17_Chr1g0151681 | 35.986 | 289 | 140 | 12 | 339 | 591 | 232 | 511 | 1.26e-37 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715790 | AT4G36870.2 | 43.885 | 834 | 260 | 26 | 1 | 732 | 1 | 728 | 1.51e-160 | 482 |
| Msa0715790 | AT4G36870.1 | 43.885 | 834 | 260 | 26 | 1 | 732 | 1 | 728 | 1.51e-160 | 482 |
| Msa0715790 | AT4G36870.4 | 47.087 | 618 | 195 | 19 | 1 | 558 | 1 | 546 | 1.22e-133 | 406 |
| Msa0715790 | AT4G36870.3 | 46.916 | 616 | 195 | 19 | 1 | 556 | 1 | 544 | 5.95e-132 | 402 |
| Msa0715790 | AT2G23760.2 | 53.349 | 418 | 138 | 9 | 336 | 732 | 235 | 616 | 1.37e-129 | 399 |
| Msa0715790 | AT2G23760.1 | 53.349 | 418 | 138 | 9 | 336 | 732 | 235 | 616 | 1.37e-129 | 399 |
| Msa0715790 | AT2G23760.3 | 53.349 | 418 | 138 | 9 | 336 | 732 | 235 | 616 | 1.37e-129 | 399 |
| Msa0715790 | AT2G23760.4 | 47.447 | 470 | 138 | 10 | 336 | 732 | 235 | 668 | 2.32e-119 | 374 |
| Msa0715790 | AT5G41410.1 | 47.985 | 273 | 114 | 4 | 342 | 587 | 197 | 468 | 7.09e-79 | 265 |
| Msa0715790 | AT4G34610.2 | 50.189 | 265 | 102 | 5 | 335 | 583 | 137 | 387 | 1.00e-74 | 251 |
| Msa0715790 | AT4G34610.4 | 50.189 | 265 | 102 | 5 | 335 | 583 | 137 | 387 | 1.00e-74 | 251 |
| Msa0715790 | AT4G34610.3 | 50.189 | 265 | 102 | 5 | 335 | 583 | 137 | 387 | 1.00e-74 | 251 |
| Msa0715790 | AT4G34610.1 | 50.189 | 265 | 102 | 5 | 335 | 583 | 137 | 387 | 1.00e-74 | 251 |
| Msa0715790 | AT1G75410.1 | 48.872 | 266 | 110 | 6 | 335 | 584 | 165 | 420 | 2.22e-72 | 245 |
| Msa0715790 | AT1G75410.2 | 48.872 | 266 | 110 | 6 | 335 | 584 | 165 | 420 | 2.22e-72 | 245 |
| Msa0715790 | AT2G16400.1 | 46.575 | 292 | 120 | 6 | 326 | 599 | 98 | 371 | 4.24e-72 | 243 |
| Msa0715790 | AT1G19700.1 | 48.913 | 276 | 113 | 7 | 332 | 586 | 160 | 428 | 1.49e-71 | 243 |
| Msa0715790 | AT1G19700.3 | 48.913 | 276 | 113 | 7 | 332 | 586 | 160 | 428 | 1.49e-71 | 243 |
| Msa0715790 | AT1G19700.5 | 48.913 | 276 | 113 | 7 | 332 | 586 | 160 | 428 | 1.49e-71 | 243 |
| Msa0715790 | AT1G19700.4 | 48.913 | 276 | 113 | 7 | 332 | 586 | 160 | 428 | 1.49e-71 | 243 |
| Msa0715790 | AT1G19700.2 | 48.913 | 276 | 113 | 7 | 332 | 586 | 160 | 428 | 1.49e-71 | 243 |
| Msa0715790 | AT2G35940.3 | 44.364 | 275 | 110 | 7 | 332 | 571 | 180 | 446 | 7.24e-61 | 217 |
| Msa0715790 | AT2G35940.1 | 44.364 | 275 | 110 | 7 | 332 | 571 | 180 | 446 | 7.24e-61 | 217 |
| Msa0715790 | AT2G35940.2 | 44.364 | 275 | 110 | 7 | 332 | 571 | 180 | 446 | 7.24e-61 | 217 |
| Msa0715790 | AT1G75410.3 | 45.378 | 238 | 106 | 5 | 335 | 557 | 165 | 393 | 6.00e-55 | 194 |
| Msa0715790 | AT5G02030.1 | 42.023 | 257 | 139 | 4 | 330 | 580 | 166 | 418 | 1.95e-53 | 194 |
| Msa0715790 | AT2G27220.1 | 39.669 | 242 | 126 | 3 | 344 | 585 | 82 | 303 | 2.38e-50 | 182 |
| Msa0715790 | AT2G27220.3 | 39.669 | 242 | 126 | 3 | 344 | 585 | 82 | 303 | 2.38e-50 | 182 |
| Msa0715790 | AT2G27990.1 | 39.700 | 267 | 115 | 8 | 330 | 580 | 258 | 494 | 4.81e-47 | 176 |
| Msa0715790 | AT2G27220.2 | 36.293 | 259 | 129 | 3 | 344 | 585 | 82 | 321 | 1.19e-46 | 172 |
| Msa0715790 | AT1G75430.1 | 36.170 | 282 | 142 | 7 | 339 | 594 | 17 | 286 | 1.86e-45 | 164 |
| Msa0715790 | AT4G32980.1 | 33.898 | 295 | 147 | 10 | 329 | 608 | 196 | 457 | 2.97e-35 | 140 |
| Msa0715790 | AT4G32980.2 | 33.898 | 295 | 147 | 10 | 329 | 608 | 196 | 457 | 2.97e-35 | 140 |
| Msa0715790 | AT2G27990.2 | 31.839 | 223 | 106 | 8 | 330 | 536 | 258 | 450 | 2.17e-21 | 98.2 |
| Msa0715790 | AT1G75430.2 | 28.571 | 224 | 122 | 7 | 339 | 536 | 17 | 228 | 5.79e-16 | 79.7 |
| Msa0715790 | AT4G32040.1 | 30.719 | 153 | 70 | 5 | 417 | 569 | 246 | 362 | 2.34e-11 | 66.6 |
| Msa0715790 | AT4G32040.2 | 30.719 | 153 | 70 | 5 | 417 | 569 | 246 | 362 | 2.39e-11 | 66.6 |
Find 165 sgRNAs with CRISPR-Local
Find 743 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCAAATTCTGGTAATTT+TGG | 0.109054 | 5_1:+8948491 | Msa0715790:CDS |
| TGTCCAAAATTACCAGAATT+TGG | 0.120803 | 5_1:-8948494 | None:intergenic |
| ACTTTCTCTATTAGAGATTT+TGG | 0.122211 | 5_1:+8959196 | Msa0715790:exon |
| GATTATGACTTTGTAATAAT+TGG | 0.193571 | 5_1:-8948808 | None:intergenic |
| TTGGATCATCAACTCTTATT+AGG | 0.217445 | 5_1:+8959097 | Msa0715790:CDS |
| CTCAGAGACGGTGGTGTTTA+TGG | 0.238679 | 5_1:-8958965 | None:intergenic |
| CATTTAAATTCTTCCATTAT+AGG | 0.247668 | 5_1:+8959222 | Msa0715790:three_prime_UTR |
| AAACCTTGCAAGGTATTATT+AGG | 0.255415 | 5_1:-8948470 | None:intergenic |
| TAATAATTGGTATCCATTAA+TGG | 0.260156 | 5_1:-8948795 | None:intergenic |
| TTGAACAATCCAAGTTTCTT+TGG | 0.267267 | 5_1:-8947926 | None:intergenic |
| GGAGGAGGAGGAGGTGGAGG+AGG | 0.269735 | 5_1:+8948644 | Msa0715790:CDS |
| AATCCAAGTTTCTTTGGTTT+TGG | 0.271415 | 5_1:-8947920 | None:intergenic |
| CAAGGAGGAGGGACCATTAA+TGG | 0.280022 | 5_1:+8948782 | Msa0715790:CDS |
| AAGGTATTATTAGGAGGGTT+AGG | 0.282608 | 5_1:-8948461 | None:intergenic |
| CTTTGATGTTCAATCCTATC+AGG | 0.288915 | 5_1:-8949061 | None:intergenic |
| CATCTATTGGCACGACAAAC+TGG | 0.289203 | 5_1:+8953147 | Msa0715790:CDS |
| TTTGATGTGATGATGGGTTT+TGG | 0.291189 | 5_1:+8950976 | Msa0715790:CDS |
| TCATCAACTCTTATTAGGTT+TGG | 0.291499 | 5_1:+8959102 | Msa0715790:CDS |
| GCAGCCTAACTTTGTCCCTT+TGG | 0.308045 | 5_1:-8948055 | None:intergenic |
| CATCAACTCTTATTAGGTTT+GGG | 0.309054 | 5_1:+8959103 | Msa0715790:CDS |
| GAAATGCTCTTTGTTGTCTT+AGG | 0.315855 | 5_1:-8951176 | None:intergenic |
| CACTGTTGTTGCTATTGCTT+TGG | 0.320557 | 5_1:-8958780 | None:intergenic |
| CATAATCAAGGTCAAGGATA+TGG | 0.328426 | 5_1:+8948824 | Msa0715790:CDS |
| GCATCTTAAAATTCCTATAA+TGG | 0.333447 | 5_1:-8959235 | None:intergenic |
| CTGCTTCATTAAGTTCTTGT+TGG | 0.335542 | 5_1:-8958729 | None:intergenic |
| AAGCCTAGGGGTCTCACCTT+TGG | 0.338082 | 5_1:-8951136 | None:intergenic |
| GTTGCAGAAGATTATGAAAC+AGG | 0.340268 | 5_1:+8959066 | Msa0715790:CDS |
| ACATTGGAGGAACAATTGTT+AGG | 0.346921 | 5_1:-8948980 | None:intergenic |
| ATTATCATTATCTTCTTCAT+TGG | 0.352999 | 5_1:+8948586 | Msa0715790:CDS |
| ATGGATGACACGTGTCGATA+TGG | 0.353373 | 5_1:+8959036 | Msa0715790:CDS |
| CTGTCAATGTGTTGAGAGCT+TGG | 0.355918 | 5_1:+8951259 | Msa0715790:CDS |
| TTGCGAATGGGAGGAGGAGG+AGG | 0.368643 | 5_1:+8948632 | Msa0715790:CDS |
| GGAGGAGGTGGAGGAGGAGA+TGG | 0.374956 | 5_1:+8948650 | Msa0715790:CDS |
| TTCCTTTGTCAGCTCCTGAT+AGG | 0.381915 | 5_1:+8949047 | Msa0715790:CDS |
| AGGTATTATTAGGAGGGTTA+GGG | 0.391338 | 5_1:-8948460 | None:intergenic |
| AGATCCAAAGGGACAAAGTT+AGG | 0.403966 | 5_1:+8948051 | Msa0715790:CDS |
| AGATTGCTTGCTGATAATCT+TGG | 0.405568 | 5_1:-8947965 | None:intergenic |
| AGCAGCAGCAACAGATCCAA+AGG | 0.414064 | 5_1:+8948039 | Msa0715790:CDS |
| TCCCATTCGCAATTCTTCCT+CGG | 0.414387 | 5_1:-8948621 | None:intergenic |
| ATGTTGGTGGTGTTTGTGTT+TGG | 0.414593 | 5_1:-8958807 | None:intergenic |
| CGAATGGGAGGAGGAGGAGG+AGG | 0.421899 | 5_1:+8948635 | Msa0715790:CDS |
| GGTGACGTGTCACTCACGTT+AGG | 0.428419 | 5_1:+8959138 | Msa0715790:CDS |
| CATTGGAGGAACAATTGTTA+GGG | 0.430971 | 5_1:-8948979 | None:intergenic |
| TACAATATTCAAGGTGGAAG+TGG | 0.433550 | 5_1:+8948695 | Msa0715790:CDS |
| AACTGGGCTATCACGAAATC+AGG | 0.434392 | 5_1:+8953164 | Msa0715790:CDS |
| GGTGGTGTTTATGGTGGTTG+TGG | 0.442910 | 5_1:-8958956 | None:intergenic |
| GTTGCTGTTGCTGTTGATGT+TGG | 0.447932 | 5_1:-8958823 | None:intergenic |
| AGGTGAGACCCCTAGGCTTA+AGG | 0.447966 | 5_1:+8951140 | Msa0715790:CDS |
| GAGAAAGAAGGTGCAGGAGG+AGG | 0.447999 | 5_1:+8951108 | Msa0715790:CDS |
| CAACAGGTTCAGAAAATGAT+TGG | 0.449106 | 5_1:+8948249 | Msa0715790:CDS |
| GAATTGCGAATGGGAGGAGG+AGG | 0.449389 | 5_1:+8948629 | Msa0715790:CDS |
| TGATGCAGATAAGCATCTAT+TGG | 0.450574 | 5_1:+8953134 | Msa0715790:CDS |
| GGAGGTGGAGGAGGAGATGG+TGG | 0.450667 | 5_1:+8948653 | Msa0715790:CDS |
| GTTGAAGGACAAGGTGTTCA+AGG | 0.454459 | 5_1:+8948557 | Msa0715790:CDS |
| AACATGGGAATAGCAGCAAT+AGG | 0.457173 | 5_1:+8947849 | None:intergenic |
| GATTGCTTGCTGATAATCTT+GGG | 0.458597 | 5_1:-8947964 | None:intergenic |
| GATTATCAGCAAGCAATCTT+CGG | 0.464683 | 5_1:+8947969 | Msa0715790:CDS |
| TGGTACATCTCTTCTACCAT+AGG | 0.465245 | 5_1:-8958709 | None:intergenic |
| TATAATAATTACAATATTCA+AGG | 0.469403 | 5_1:+8948686 | Msa0715790:CDS |
| TCTAACAATTCAGCTGTTGA+AGG | 0.474903 | 5_1:-8948173 | None:intergenic |
| CTTGATCCATCATACCCATC+TGG | 0.477420 | 5_1:-8951200 | None:intergenic |
| GTTCAAGTACCTTAAGCCTA+GGG | 0.478381 | 5_1:-8951149 | None:intergenic |
| GAACTCATTTGATGTGATGA+TGG | 0.480790 | 5_1:+8950969 | Msa0715790:CDS |
| CCTTGCAAGGTATTATTAGG+AGG | 0.482782 | 5_1:-8948467 | None:intergenic |
| AGGTTTGGGTCCACTACTAC+TGG | 0.485304 | 5_1:+8959117 | Msa0715790:CDS |
| CGATCAGGCAAGCCTCTTTG+TGG | 0.487003 | 5_1:-8951234 | None:intergenic |
| TGGTGGCAGGTCTGTATCAA+AGG | 0.490652 | 5_1:-8958998 | None:intergenic |
| CAAGAAGGAGGTGTTGTTGA+AGG | 0.492783 | 5_1:+8948542 | Msa0715790:CDS |
| AATTTACAATTGCAAGGAGG+AGG | 0.494958 | 5_1:+8948770 | Msa0715790:CDS |
| TCTTGAAGCAATTCTTGAGT+AGG | 0.496981 | 5_1:-8948890 | None:intergenic |
| GCTGTTGCTGTTGATGTTGG+TGG | 0.498949 | 5_1:-8958820 | None:intergenic |
| AGACAACATCCACAACCAAC+AGG | 0.499590 | 5_1:+8948233 | Msa0715790:CDS |
| TAACCAAAGGTGAGACCCCT+AGG | 0.502296 | 5_1:+8951133 | Msa0715790:CDS |
| CAAACTGGTTCATAAATGCC+AGG | 0.503008 | 5_1:+8958671 | Msa0715790:CDS |
| CCTCCTAATAATACCTTGCA+AGG | 0.509270 | 5_1:+8948467 | Msa0715790:CDS |
| CCATTGATCTGTGTGGTGGC+AGG | 0.513586 | 5_1:-8959011 | None:intergenic |
| GGTTAGATTGTGGAAACCTA+TGG | 0.513783 | 5_1:+8958693 | Msa0715790:CDS |
| ACACCAAAACCAAAGAAACT+TGG | 0.514188 | 5_1:+8947917 | Msa0715790:CDS |
| AACAATTGTTCCTCCAATGT+TGG | 0.514198 | 5_1:+8948983 | Msa0715790:CDS |
| TGTTGATGATTTAATTTGTA+CGG | 0.516004 | 5_1:-8948740 | None:intergenic |
| TTGAATTTATCAGAAGGAGA+AGG | 0.516929 | 5_1:+8948086 | Msa0715790:CDS |
| TGTTCAAGTACCTTAAGCCT+AGG | 0.517673 | 5_1:-8951150 | None:intergenic |
| AGATGCTTATCTGCATCACT+TGG | 0.518033 | 5_1:-8953129 | None:intergenic |
| GCAGCAGCAACAGATCCAAA+GGG | 0.519502 | 5_1:+8948040 | Msa0715790:CDS |
| TATGAAACAGGTTCTGACAT+TGG | 0.520544 | 5_1:+8959078 | Msa0715790:CDS |
| GTGACGTGTCACTCACGTTA+GGG | 0.521490 | 5_1:+8959139 | Msa0715790:CDS |
| GAAGGAGAAGGAGAAGAAAG+AGG | 0.521795 | 5_1:+8948098 | Msa0715790:CDS |
| AAGCAAAGTTGTGAGTTACT+AGG | 0.521988 | 5_1:+8951084 | Msa0715790:CDS |
| TGGTTGTGGATTGCATTGCT+TGG | 0.522581 | 5_1:-8958942 | None:intergenic |
| ATCTATTGGCACGACAAACT+GGG | 0.524043 | 5_1:+8953148 | Msa0715790:CDS |
| ATCTTCGGCTTCTCCTCGAA+TGG | 0.524189 | 5_1:+8947984 | Msa0715790:CDS |
| GACAAAGTTAGGCTGCTACA+AGG | 0.533345 | 5_1:+8948062 | Msa0715790:CDS |
| AGGATTAGAATCACCAACAT+TGG | 0.534289 | 5_1:-8948996 | None:intergenic |
| TAAATGCCAGGGTTAGATTG+TGG | 0.540228 | 5_1:+8958683 | Msa0715790:CDS |
| GCTTCTTTCCATGCTTGATG+AGG | 0.541832 | 5_1:+8949096 | Msa0715790:CDS |
| TATCAGGCACATTGCCAGCA+TGG | 0.544137 | 5_1:-8959167 | None:intergenic |
| TTATTGATTGCAACTAGTGA+AGG | 0.544235 | 5_1:-8958898 | None:intergenic |
| CCTGCCACCACACAGATCAA+TGG | 0.548058 | 5_1:+8959011 | Msa0715790:CDS |
| CTTGCAAGGTATTATTAGGA+GGG | 0.550286 | 5_1:-8948466 | None:intergenic |
| TGATCTCTCGAATCCATTCG+AGG | 0.551486 | 5_1:-8947997 | None:intergenic |
| TCAGGAGCTGACAAAGGAAG+AGG | 0.551635 | 5_1:-8949043 | None:intergenic |
| ACGTTAGGGTTACGCCATGC+TGG | 0.552293 | 5_1:+8959153 | Msa0715790:CDS |
| TTGTTTGATGAGATTGAGAA+GGG | 0.552912 | 5_1:-8948373 | None:intergenic |
| GGAGGTGTGTATGAAACAGC+AGG | 0.555434 | 5_1:+8948119 | Msa0715790:CDS |
| CAAGGGTTGAATTTATCAGA+AGG | 0.556382 | 5_1:+8948080 | Msa0715790:CDS |
| GAAGAATTGCGAATGGGAGG+AGG | 0.556651 | 5_1:+8948626 | Msa0715790:CDS |
| CAAAGTCATAATCAAGGTCA+AGG | 0.557301 | 5_1:+8948818 | Msa0715790:CDS |
| GGTTCAGAAAATGATTGGTA+TGG | 0.558104 | 5_1:+8948254 | Msa0715790:CDS |
| ATTTCACCAGATGGGTATGA+TGG | 0.563946 | 5_1:+8951194 | Msa0715790:CDS |
| ATAGGATTGAACATCAAAGA+AGG | 0.565025 | 5_1:+8949065 | Msa0715790:CDS |
| AACTCATTTGATGTGATGAT+GGG | 0.566821 | 5_1:+8950970 | Msa0715790:CDS |
| TATTGATTGCAACTAGTGAA+GGG | 0.569406 | 5_1:-8958897 | None:intergenic |
| ACAAAGAGCATTTCACCAGA+TGG | 0.570809 | 5_1:+8951185 | Msa0715790:CDS |
| GGAGGTGTTGTTGAAGGACA+AGG | 0.574861 | 5_1:+8948548 | Msa0715790:CDS |
| ATTAGAATCACCAACATTGG+AGG | 0.575203 | 5_1:-8948993 | None:intergenic |
| AACACATTGACAGAACGATC+AGG | 0.575475 | 5_1:-8951249 | None:intergenic |
| GCCGAGGAAGAATTGCGAAT+GGG | 0.575509 | 5_1:+8948620 | Msa0715790:CDS |
| GCATTGAATTTACAATTGCA+AGG | 0.575976 | 5_1:+8948764 | Msa0715790:CDS |
| CTAGGAGAGAAAGAAGGTGC+AGG | 0.576408 | 5_1:+8951102 | Msa0715790:CDS |
| ACAAAGTTAGGCTGCTACAA+GGG | 0.578561 | 5_1:+8948063 | Msa0715790:CDS |
| GTATGATGGATCAAGAAGCT+TGG | 0.579404 | 5_1:+8951208 | Msa0715790:CDS |
| TTATTACAAAGTCATAATCA+AGG | 0.585308 | 5_1:+8948812 | Msa0715790:CDS |
| AGAATTTGGAAAACCTTGCA+AGG | 0.586012 | 5_1:-8948480 | None:intergenic |
| TACGGATATGATGAAGAAGA+TGG | 0.586895 | 5_1:-8948722 | None:intergenic |
| ATTACATGCCTCATCAAGCA+TGG | 0.588810 | 5_1:-8949104 | None:intergenic |
| ACCACACAGATCAATGGCCA+TGG | 0.589823 | 5_1:+8959017 | Msa0715790:CDS |
| GTGTGTCTTCAAGTAAACAA+TGG | 0.592067 | 5_1:-8947898 | None:intergenic |
| CAAAGAGCATTTCACCAGAT+GGG | 0.592402 | 5_1:+8951186 | Msa0715790:CDS |
| ATATCGACACGTGTCATCCA+TGG | 0.592726 | 5_1:-8959034 | None:intergenic |
| GGTGGCAGGTCTGTATCAAA+GGG | 0.593177 | 5_1:-8958997 | None:intergenic |
| AAACTGGTTCATAAATGCCA+GGG | 0.593981 | 5_1:+8958672 | Msa0715790:CDS |
| TGACACGTCACCAGTAGTAG+TGG | 0.595751 | 5_1:-8959127 | None:intergenic |
| GTTGTTTGATGAGATTGAGA+AGG | 0.596534 | 5_1:-8948374 | None:intergenic |
| AATATTCAAGGTGGAAGTGG+AGG | 0.598539 | 5_1:+8948698 | Msa0715790:CDS |
| ATTTACAATTGCAAGGAGGA+GGG | 0.600973 | 5_1:+8948771 | Msa0715790:CDS |
| AATAGTACTACTACTCAAGA+AGG | 0.607029 | 5_1:+8948527 | Msa0715790:CDS |
| AGCCGAGGAAGAATTGCGAA+TGG | 0.611459 | 5_1:+8948619 | Msa0715790:CDS |
| GAGGAAGAATTGCGAATGGG+AGG | 0.619684 | 5_1:+8948623 | Msa0715790:CDS |
| GGAGAAGGAGAAGAAAGAGG+AGG | 0.619996 | 5_1:+8948101 | Msa0715790:CDS |
| GATTGAACATCAAAGAAGGA+AGG | 0.620262 | 5_1:+8949069 | Msa0715790:CDS |
| AATAATTACAATATTCAAGG+TGG | 0.620476 | 5_1:+8948689 | Msa0715790:CDS |
| GGAGAGAAAGAAGGTGCAGG+AGG | 0.623872 | 5_1:+8951105 | Msa0715790:CDS |
| ATCCTATCAGGAGCTGACAA+AGG | 0.627672 | 5_1:-8949049 | None:intergenic |
| TTCAAGTACCTTAAGCCTAG+GGG | 0.629716 | 5_1:-8951148 | None:intergenic |
| GCAGGAGGAGGTTTAACCAA+AGG | 0.632688 | 5_1:+8951120 | Msa0715790:CDS |
| TGGTATGGTAATAACAGACA+AGG | 0.634269 | 5_1:+8948269 | Msa0715790:CDS |
| GGCAGGTCTGTATCAAAGGG+TGG | 0.635757 | 5_1:-8958994 | None:intergenic |
| ACAAGAACTTAATGAAGCAG+AGG | 0.640031 | 5_1:+8958732 | Msa0715790:CDS |
| CATAAACACCACCGTCTCTG+AGG | 0.642413 | 5_1:+8958966 | Msa0715790:CDS |
| GGGTGGAACCACCTCAGAGA+CGG | 0.642988 | 5_1:-8958977 | None:intergenic |
| GAGTTACTAGGAGAGAAAGA+AGG | 0.649147 | 5_1:+8951096 | Msa0715790:CDS |
| ATGGCCATTGATCTGTGTGG+TGG | 0.651496 | 5_1:-8959015 | None:intergenic |
| TGCAGCATCAAATTAAAACA+CGG | 0.652030 | 5_1:+8959272 | Msa0715790:three_prime_UTR |
| AAACACCACCGTCTCTGAGG+TGG | 0.655495 | 5_1:+8958969 | Msa0715790:CDS |
| ATTGGAAGCTGCAAAAGCCG+AGG | 0.656833 | 5_1:+8948604 | Msa0715790:CDS |
| AGGTTTCCACAATCTAACCC+TGG | 0.667828 | 5_1:-8958689 | None:intergenic |
| AGTACTACTACTCAAGAAGG+AGG | 0.671426 | 5_1:+8948530 | Msa0715790:CDS |
| AGAGACGGTGGTGTTTATGG+TGG | 0.674678 | 5_1:-8958962 | None:intergenic |
| TGGAACCACCTCAGAGACGG+TGG | 0.677945 | 5_1:-8958974 | None:intergenic |
| TTGAATTTACAATTGCAAGG+AGG | 0.690593 | 5_1:+8948767 | Msa0715790:CDS |
| GAAGCTTGGAGACCACAAAG+AGG | 0.697296 | 5_1:+8951222 | Msa0715790:CDS |
| GGTATGGTAATAACAGACAA+GGG | 0.699769 | 5_1:+8948270 | Msa0715790:CDS |
| TCCATGGCCATTGATCTGTG+TGG | 0.700090 | 5_1:-8959018 | None:intergenic |
| AGACGAAGAACGAAACGTTG+CGG | 0.719547 | 5_1:-8948198 | None:intergenic |
| CAAAGCAATAGCAACAACAG+TGG | 0.740466 | 5_1:+8958781 | Msa0715790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATAATTACAATATTCA+AGG | + | chr5_1:8948686-8948705 | Msa0715790:CDS | 10.0% |
| !! | AAATATGAAGAAAAATATAT+GGG | - | chr5_1:8949326-8949345 | None:intergenic | 10.0% |
| !! | TAAATATGAAGAAAAATATA+TGG | - | chr5_1:8949327-8949346 | None:intergenic | 10.0% |
| !!! | TTTTAATCAATCTATTTAAT+TGG | + | chr5_1:8949980-8949999 | Msa0715790:intron | 10.0% |
| !!! | TTAAATATAAAGTGTTAAAA+GGG | + | chr5_1:8951493-8951512 | Msa0715790:intron | 10.0% |
| !!! | TTTTTTATACTGAAAATTTA+GGG | - | chr5_1:8951701-8951720 | None:intergenic | 10.0% |
| !!! | TTTTTTTATACTGAAAATTT+AGG | - | chr5_1:8951702-8951721 | None:intergenic | 10.0% |
| !! | TTAATTAATCAATTCATATA+AGG | + | chr5_1:8953270-8953289 | Msa0715790:intron | 10.0% |
| !! | TTTATCTAAAAAAACAAATT+AGG | - | chr5_1:8953438-8953457 | None:intergenic | 10.0% |
| !! | ATAAATCATAAATAAATCAT+AGG | + | chr5_1:8954639-8954658 | Msa0715790:intron | 10.0% |
| !! | TAATTATGAAAACAAAAAAA+AGG | - | chr5_1:8955977-8955996 | None:intergenic | 10.0% |
| !! | ATATAAAACAAAAAGAAAAA+AGG | + | chr5_1:8957117-8957136 | Msa0715790:intron | 10.0% |
| !!! | GAAAAAAATTGATTTAAATT+TGG | - | chr5_1:8957972-8957991 | None:intergenic | 10.0% |
| !! | AATATGAAGAAAAATATATG+GGG | - | chr5_1:8949325-8949344 | None:intergenic | 15.0% |
| !! | TCTTCACATAAAATTTATTA+TGG | - | chr5_1:8949580-8949599 | None:intergenic | 15.0% |
| !! | AAAAAAATTGGACAAAATTT+AGG | - | chr5_1:8949618-8949637 | None:intergenic | 15.0% |
| !!! | TATATTATTTCATTTTGCTA+TGG | + | chr5_1:8949673-8949692 | Msa0715790:intron | 15.0% |
| !!! | ATTTGTTTTAAGAATATCTT+GGG | - | chr5_1:8950650-8950669 | None:intergenic | 15.0% |
| !!! | TATTTGTTTTAAGAATATCT+TGG | - | chr5_1:8950651-8950670 | None:intergenic | 15.0% |
| !! | TATCAACAATATAATGATTA+AGG | - | chr5_1:8950692-8950711 | None:intergenic | 15.0% |
| !!! | GTAACTAAAATTTATTTTAG+AGG | - | chr5_1:8950809-8950828 | None:intergenic | 15.0% |
| !!! | TTTTATACTGAGTAAAATTT+GGG | + | chr5_1:8951402-8951421 | Msa0715790:intron | 15.0% |
| !!! | GTTAAATATAAAGTGTTAAA+AGG | + | chr5_1:8951492-8951511 | Msa0715790:intron | 15.0% |
| !!! | TTACCTTTTTTGTATTAAAA+TGG | - | chr5_1:8952094-8952113 | None:intergenic | 15.0% |
| !! | TAAATGAAAAAGATCATTAT+GGG | - | chr5_1:8952158-8952177 | None:intergenic | 15.0% |
| !! | TTAAATGAAAAAGATCATTA+TGG | - | chr5_1:8952159-8952178 | None:intergenic | 15.0% |
| !!! | AGTTTTTATTTATTGAGAAT+TGG | - | chr5_1:8952447-8952466 | None:intergenic | 15.0% |
| !! | ATTTGTTTATTTATCTATCT+AGG | - | chr5_1:8952527-8952546 | None:intergenic | 15.0% |
| !!! | TAACCATCTATTTTATTAAT+AGG | + | chr5_1:8952822-8952841 | Msa0715790:intron | 15.0% |
| !!! | CTTTTTAATCAGTTTATTTA+TGG | - | chr5_1:8952883-8952902 | None:intergenic | 15.0% |
| !!! | ATAAACTGATTAAAAAGTAT+AGG | + | chr5_1:8952886-8952905 | Msa0715790:intron | 15.0% |
| !!! | GTCATATTTTACAATTTTAT+GGG | + | chr5_1:8954706-8954725 | Msa0715790:intron | 15.0% |
| !!! | ATTTTTTATTTTTCTGAAAG+AGG | - | chr5_1:8954925-8954944 | None:intergenic | 15.0% |
| !!! | TTTTGTTTATATGATTTTTG+AGG | - | chr5_1:8955160-8955179 | None:intergenic | 15.0% |
| !! | ACCATAAAAGTTAAATATTT+AGG | + | chr5_1:8955694-8955713 | Msa0715790:intron | 15.0% |
| !!! | TCCTAAATATTTAACTTTTA+TGG | - | chr5_1:8955698-8955717 | None:intergenic | 15.0% |
| !!! | ATTCTTACTTTTATTTTTGT+TGG | + | chr5_1:8956252-8956271 | Msa0715790:intron | 15.0% |
| !! | TAAGAGATATATATGAATAA+CGG | - | chr5_1:8958046-8958065 | None:intergenic | 15.0% |
| !! | ATTATCATTATCTTCTTCAT+TGG | + | chr5_1:8948586-8948605 | Msa0715790:CDS | 20.0% |
| !! | AATAATTACAATATTCAAGG+TGG | + | chr5_1:8948689-8948708 | Msa0715790:CDS | 20.0% |
| !!! | TGTTGATGATTTAATTTGTA+CGG | - | chr5_1:8948743-8948762 | None:intergenic | 20.0% |
| !! | TAATAATTGGTATCCATTAA+TGG | - | chr5_1:8948798-8948817 | None:intergenic | 20.0% |
| !! | GATTATGACTTTGTAATAAT+TGG | - | chr5_1:8948811-8948830 | None:intergenic | 20.0% |
| !! | TTATTACAAAGTCATAATCA+AGG | + | chr5_1:8948812-8948831 | Msa0715790:CDS | 20.0% |
| !! | TATCTTTGTGATTATCAATT+TGG | + | chr5_1:8949372-8949391 | Msa0715790:intron | 20.0% |
| !!! | TAACTTATGTGTTTTTTGTA+TGG | + | chr5_1:8949485-8949504 | Msa0715790:intron | 20.0% |
| !! | AAATTTAGGTGTATTTGATA+TGG | - | chr5_1:8949604-8949623 | None:intergenic | 20.0% |
| !! | TGCATGTGTAAAAAAAAAAT+TGG | - | chr5_1:8949630-8949649 | None:intergenic | 20.0% |
| !! | ATATATGATAATTCCATATC+AGG | - | chr5_1:8949658-8949677 | None:intergenic | 20.0% |
| !! | TATCTTCAAAATTATCTATG+TGG | + | chr5_1:8949708-8949727 | Msa0715790:intron | 20.0% |
| !! | AATCAATCTATTTAATTGGT+AGG | + | chr5_1:8949984-8950003 | Msa0715790:intron | 20.0% |
| !! | ATTTCTATGATAGGTATATT+TGG | - | chr5_1:8950232-8950251 | None:intergenic | 20.0% |
| !!! | CTGTAAAATATTTCTATGAT+AGG | - | chr5_1:8950241-8950260 | None:intergenic | 20.0% |
| !!! | TTTTGGTCAAAGTTTAATTT+CGG | + | chr5_1:8950742-8950761 | Msa0715790:intron | 20.0% |
| !! | ATAATGAATATAATTGATGC+AGG | + | chr5_1:8950900-8950919 | Msa0715790:intron | 20.0% |
| !! | ATAGTATAAATGGTTGATTA+GGG | - | chr5_1:8951327-8951346 | None:intergenic | 20.0% |
| !! | TATAGTATAAATGGTTGATT+AGG | - | chr5_1:8951328-8951347 | None:intergenic | 20.0% |
| !! | AAAGTGATATCAATAATCAA+TGG | + | chr5_1:8951357-8951376 | Msa0715790:intron | 20.0% |
| !!! | CTTTTATACTGAGTAAAATT+TGG | + | chr5_1:8951401-8951420 | Msa0715790:intron | 20.0% |
| !!! | ATATTTGAGACATAATAAGT+TGG | - | chr5_1:8951737-8951756 | None:intergenic | 20.0% |
| !! | AAATGAAAAAGATCATTATG+GGG | - | chr5_1:8952157-8952176 | None:intergenic | 20.0% |
| !! | GTTAAAAGTTAAAGAATTAG+AGG | - | chr5_1:8952704-8952723 | None:intergenic | 20.0% |
| !! | CTACCTATTAATAAAATAGA+TGG | - | chr5_1:8952828-8952847 | None:intergenic | 20.0% |
| !!! | CATCTATTTTATTAATAGGT+AGG | + | chr5_1:8952826-8952845 | Msa0715790:intron | 20.0% |
| !!! | TTAAAACTATACAGTTTTCA+TGG | - | chr5_1:8953254-8953273 | None:intergenic | 20.0% |
| !! | GTAAAAAGAAACTATGAAAA+GGG | + | chr5_1:8953312-8953331 | Msa0715790:intron | 20.0% |
| !! | TAAAAAGAAACTATGAAAAG+GGG | + | chr5_1:8953313-8953332 | Msa0715790:intron | 20.0% |
| !!! | TATACTATTTTTTCGATTCA+AGG | - | chr5_1:8953537-8953556 | None:intergenic | 20.0% |
| !!! | ATTGAGATAATGTATTTCTA+AGG | - | chr5_1:8954086-8954105 | None:intergenic | 20.0% |
| !! | AGAAATACATTATCTCAATA+AGG | + | chr5_1:8954087-8954106 | Msa0715790:intron | 20.0% |
| !! | AATGCATTATGTTATATTCT+TGG | - | chr5_1:8954145-8954164 | None:intergenic | 20.0% |
| !! | ATCAAAATCAAAACTTCAAA+TGG | + | chr5_1:8954534-8954553 | Msa0715790:intron | 20.0% |
| !!! | AACTTCAAATGGTTTTTTTT+AGG | + | chr5_1:8954545-8954564 | Msa0715790:intron | 20.0% |
| !!! | GGTCATATTTTACAATTTTA+TGG | + | chr5_1:8954705-8954724 | Msa0715790:intron | 20.0% |
| !! | TAGTATCTTCTATATATTTC+AGG | - | chr5_1:8955248-8955267 | None:intergenic | 20.0% |
| !! | TACAATGAAAAAGAAGTTTA+AGG | + | chr5_1:8955464-8955483 | Msa0715790:intron | 20.0% |
| !! | ATATCAGAAAGAAAATGAAT+TGG | + | chr5_1:8955626-8955645 | Msa0715790:intron | 20.0% |
| !! | ACAAAAAAAAACGTAAATCA+CGG | - | chr5_1:8955886-8955905 | None:intergenic | 20.0% |
| !! | AAACATAAAACCCTAATAAA+AGG | - | chr5_1:8955942-8955961 | None:intergenic | 20.0% |
| !! | AACAAAAAAAAGAAAATCAC+AGG | - | chr5_1:8955967-8955986 | None:intergenic | 20.0% |
| !! | TCATAATTAACGATTTAGTT+AGG | + | chr5_1:8955988-8956007 | Msa0715790:intron | 20.0% |
| !! | CATAATTAACGATTTAGTTA+GGG | + | chr5_1:8955989-8956008 | Msa0715790:intron | 20.0% |
| !!! | ATAGATAGATTCCTTTTATT+AGG | + | chr5_1:8956086-8956105 | Msa0715790:intron | 20.0% |
| !!! | TAGATAGATTCCTTTTATTA+GGG | + | chr5_1:8956087-8956106 | Msa0715790:intron | 20.0% |
| !! | AAACATAAAACCCTAATAAA+AGG | - | chr5_1:8955942-8955961 | None:intergenic | 20.0% |
| !! | TCATAATTAACGATTTAGTT+AGG | + | chr5_1:8955988-8956007 | Msa0715790:intron | 20.0% |
| !! | CATAATTAACGATTTAGTTA+GGG | + | chr5_1:8955989-8956008 | Msa0715790:intron | 20.0% |
| !! | ACATTTATTTCCCATATTTA+TGG | - | chr5_1:8956466-8956485 | None:intergenic | 20.0% |
| !!! | TTTTAAGAACCTTAAAACTT+TGG | + | chr5_1:8956547-8956566 | Msa0715790:intron | 20.0% |
| !! | GATATGTAACGAAAAAAATT+AGG | - | chr5_1:8956974-8956993 | None:intergenic | 20.0% |
| !!! | AATTTTTTTCGTTACATATC+TGG | + | chr5_1:8956974-8956993 | Msa0715790:intron | 20.0% |
| !! | AAACTATAACAATAGTCATT+TGG | + | chr5_1:8957704-8957723 | Msa0715790:intron | 20.0% |
| !!! | ATATATATGAATAACGGATT+TGG | - | chr5_1:8958040-8958059 | None:intergenic | 20.0% |
| !! | GTTATTCATATATATCTCTT+AGG | + | chr5_1:8958045-8958064 | Msa0715790:intron | 20.0% |
| !! | GTTGGAAATATATAGAAAAA+TGG | + | chr5_1:8958113-8958132 | Msa0715790:intron | 20.0% |
| !!! | ATTGATATCAGATCTTTTTT+GGG | - | chr5_1:8958863-8958882 | None:intergenic | 20.0% |
| !!! | TAGAGAAAGTTATTTTTATC+AGG | - | chr5_1:8959186-8959205 | None:intergenic | 20.0% |
| !! | CATTTAAATTCTTCCATTAT+AGG | + | chr5_1:8959222-8959241 | Msa0715790:three_prime_UTR | 20.0% |
| !! | TTTCCAAATTCTGGTAATTT+TGG | + | chr5_1:8948491-8948510 | Msa0715790:CDS | 25.0% |
| ! | CTTAGAATTCAATTGATACA+TGG | + | chr5_1:8949430-8949449 | Msa0715790:intron | 25.0% |
| !! | AATAAATTTGTTCTCTTCTC+CGG | + | chr5_1:8949807-8949826 | Msa0715790:intron | 25.0% |
| ! | TATTTGAGAAAGAAAAAAGC+CGG | + | chr5_1:8949876-8949895 | Msa0715790:intron | 25.0% |
| !!! | ATTTTGGGTTTGTTTTAGTT+TGG | + | chr5_1:8950032-8950051 | Msa0715790:intron | 25.0% |
| ! | TAGGTATATTTGGATATGTA+AGG | - | chr5_1:8950222-8950241 | None:intergenic | 25.0% |
| !! | TTTAGCTTATAATAGAGAAC+CGG | - | chr5_1:8950369-8950388 | None:intergenic | 25.0% |
| ! | TATTGAATGAATGATGTATG+CGG | + | chr5_1:8950408-8950427 | Msa0715790:intron | 25.0% |
| !! | TTTCATTGCGGATTTTAAAT+GGG | - | chr5_1:8950538-8950557 | None:intergenic | 25.0% |
| !! | ATTTCATTGCGGATTTTAAA+TGG | - | chr5_1:8950539-8950558 | None:intergenic | 25.0% |
| !! | GTTTCAAGTAAATTTCATTG+CGG | - | chr5_1:8950550-8950569 | None:intergenic | 25.0% |
| !! | TTTCGACTTTTACAATTGAT+AGG | - | chr5_1:8950572-8950591 | None:intergenic | 25.0% |
| !! | CAAATATTTGTTGGTACATA+TGG | - | chr5_1:8950623-8950642 | None:intergenic | 25.0% |
| ! | CATATGTACCAACAAATATT+TGG | + | chr5_1:8950621-8950640 | Msa0715790:intron | 25.0% |
| !!! | CTTGATTCCTTCAATTTTTT+TGG | + | chr5_1:8950725-8950744 | Msa0715790:intron | 25.0% |
| ! | ACTTTGACCAAAAAAATTGA+AGG | - | chr5_1:8950735-8950754 | None:intergenic | 25.0% |
| !!! | TATGTTTTTTTCATGTGCAT+CGG | - | chr5_1:8950769-8950788 | None:intergenic | 25.0% |
| ! | CGATGTTAGTATAGTATAAA+TGG | - | chr5_1:8951337-8951356 | None:intergenic | 25.0% |
| !!! | TTTTCAAGACAAAATTCAGA+CGG | - | chr5_1:8951465-8951484 | None:intergenic | 25.0% |
| !! | CTAATTTTTACTTGCATTTG+AGG | + | chr5_1:8951827-8951846 | Msa0715790:intron | 25.0% |
| ! | GTATGTTGTAAATTTGAACT+TGG | + | chr5_1:8951915-8951934 | Msa0715790:intron | 25.0% |
| !!! | AATATCTAGCTCTGATAATA+TGG | - | chr5_1:8951988-8952007 | None:intergenic | 25.0% |
| !! | GAGCATTTCATTTTACTTAA+TGG | - | chr5_1:8952072-8952091 | None:intergenic | 25.0% |
| !!! | GCTCCATTTTAATACAAAAA+AGG | + | chr5_1:8952088-8952107 | Msa0715790:intron | 25.0% |
| ! | TTTGCCAAATTACACTAAAA+AGG | + | chr5_1:8952179-8952198 | Msa0715790:intron | 25.0% |
| !!! | GTTACCTTTTTAGTGTAATT+TGG | - | chr5_1:8952186-8952205 | None:intergenic | 25.0% |
| !! | ATTCTATTGTGTGAATCTTT+TGG | - | chr5_1:8952402-8952421 | None:intergenic | 25.0% |
| !! | ATAGTGATAGTGATGTATAT+TGG | - | chr5_1:8952478-8952497 | None:intergenic | 25.0% |
| ! | TGTCATTAAAAACAATTCAC+AGG | - | chr5_1:8952615-8952634 | None:intergenic | 25.0% |
| ! | AGTTAAAGAATTAGAGGTTA+TGG | - | chr5_1:8952698-8952717 | None:intergenic | 25.0% |
| !!! | CATTTCTTTTTTCCTTTCAT+GGG | - | chr5_1:8953010-8953029 | None:intergenic | 25.0% |
| !!! | ACATTTCTTTTTTCCTTTCA+TGG | - | chr5_1:8953011-8953030 | None:intergenic | 25.0% |
| ! | ATGTCTCTTTATATGGTTAA+GGG | + | chr5_1:8953063-8953082 | Msa0715790:intron | 25.0% |
| !!! | ACTTTGATGTCATTTTCTTT+TGG | + | chr5_1:8953090-8953109 | Msa0715790:intron | 25.0% |
| ! | TTACGTGAATATGTTTATGT+GGG | - | chr5_1:8953296-8953315 | None:intergenic | 25.0% |
| ! | TTTACGTGAATATGTTTATG+TGG | - | chr5_1:8953297-8953316 | None:intergenic | 25.0% |
| ! | CGTAAAAAGAAACTATGAAA+AGG | + | chr5_1:8953311-8953330 | Msa0715790:intron | 25.0% |
| ! | ATCTGAATTAAATTTACTGC+TGG | - | chr5_1:8953340-8953359 | None:intergenic | 25.0% |
| !! | AGATGTAACTTACATCATTT+TGG | + | chr5_1:8953356-8953375 | Msa0715790:intron | 25.0% |
| !! | GATGTAACTTACATCATTTT+GGG | + | chr5_1:8953357-8953376 | Msa0715790:intron | 25.0% |
| ! | TTTCTTAAAGAAGCAATGTT+TGG | + | chr5_1:8953404-8953423 | Msa0715790:intron | 25.0% |
| ! | GTCATGGAAATTGTTTAATA+TGG | - | chr5_1:8953602-8953621 | None:intergenic | 25.0% |
| !! | TGTTTTGTCAAAGAATTTGT+GGG | - | chr5_1:8953984-8954003 | None:intergenic | 25.0% |
| !!! | TTGTTTTGTCAAAGAATTTG+TGG | - | chr5_1:8953985-8954004 | None:intergenic | 25.0% |
| !!! | TGGATACACAGTTTTTTAAT+AGG | + | chr5_1:8954057-8954076 | Msa0715790:intron | 25.0% |
| !!! | GGATACACAGTTTTTTAATA+GGG | + | chr5_1:8954058-8954077 | Msa0715790:intron | 25.0% |
| !!! | GTATTTTTTTGAATGTTTGC+AGG | - | chr5_1:8954263-8954282 | None:intergenic | 25.0% |
| !!! | TGCTATTTTGCAGATTTTAT+TGG | - | chr5_1:8954473-8954492 | None:intergenic | 25.0% |
| ! | AATAAAATCTGCAAAATAGC+AGG | + | chr5_1:8954472-8954491 | Msa0715790:intron | 25.0% |
| !!! | TCATCATTGTGTTTTGATTT+CGG | - | chr5_1:8954504-8954523 | None:intergenic | 25.0% |
| ! | CATTTGATTCTATGCTTATT+TGG | - | chr5_1:8954866-8954885 | None:intergenic | 25.0% |
| !!! | GATCTTGATTTGTATGTTTT+GGG | - | chr5_1:8955072-8955091 | None:intergenic | 25.0% |
| !!! | TGATCTTGATTTGTATGTTT+TGG | - | chr5_1:8955073-8955092 | None:intergenic | 25.0% |
| ! | AACATACAAATCAAGATCAA+TGG | + | chr5_1:8955074-8955093 | Msa0715790:intron | 25.0% |
| !!! | TCATGATTTGTTGATAGTTT+AGG | - | chr5_1:8955131-8955150 | None:intergenic | 25.0% |
| !! | ATATATTTCAGGTGCAAAAT+AGG | - | chr5_1:8955237-8955256 | None:intergenic | 25.0% |
| ! | TGAATTGGAGAAAAGAAAAA+AGG | + | chr5_1:8955641-8955660 | Msa0715790:intron | 25.0% |
| ! | GAATTGGAGAAAAGAAAAAA+GGG | + | chr5_1:8955642-8955661 | Msa0715790:intron | 25.0% |
| ! | AATTGGAGAAAAGAAAAAAG+GGG | + | chr5_1:8955643-8955662 | Msa0715790:intron | 25.0% |
| !! | TTCCTTGATTTCCTTTTATT+AGG | + | chr5_1:8955928-8955947 | Msa0715790:intron | 25.0% |
| !! | TCCTTGATTTCCTTTTATTA+GGG | + | chr5_1:8955929-8955948 | Msa0715790:intron | 25.0% |
| !! | TAATTTTTCCAAAACCCTAA+TGG | - | chr5_1:8956032-8956051 | None:intergenic | 25.0% |
| !!! | ATTAGGGTTTTGGAAAAATT+AGG | + | chr5_1:8956031-8956050 | Msa0715790:intron | 25.0% |
| !!! | TTAGGGTTTTGGAAAAATTA+GGG | + | chr5_1:8956032-8956051 | Msa0715790:intron | 25.0% |
| ! | AAAAATTAGGGCTTCAAAAT+TGG | + | chr5_1:8956044-8956063 | Msa0715790:intron | 25.0% |
| ! | AACAAAAAAAAGGAAATCAC+AGG | - | chr5_1:8956125-8956144 | None:intergenic | 25.0% |
| !! | TAATTTTTCCAAAACCCTAA+TGG | - | chr5_1:8956032-8956051 | None:intergenic | 25.0% |
| !!! | ATTAGGGTTTTGGAAAAATT+AGG | + | chr5_1:8956031-8956050 | Msa0715790:intron | 25.0% |
| !!! | TTAGGGTTTTGGAAAAATTA+GGG | + | chr5_1:8956032-8956051 | Msa0715790:intron | 25.0% |
| ! | AAAAATTAGGGCTTCAAAAT+TGG | + | chr5_1:8956044-8956063 | Msa0715790:intron | 25.0% |
| ! | ATTTATGGTTACCAATTGTA+TGG | - | chr5_1:8956451-8956470 | None:intergenic | 25.0% |
| !! | ACAATTGGTAACCATAAATA+TGG | + | chr5_1:8956452-8956471 | Msa0715790:intron | 25.0% |
| !! | CAATTGGTAACCATAAATAT+GGG | + | chr5_1:8956453-8956472 | Msa0715790:intron | 25.0% |
| ! | AAATATGGGAAATAAATGTG+TGG | + | chr5_1:8956467-8956486 | Msa0715790:intron | 25.0% |
| !! | TTCTTTTAGCCAAAGTTTTA+AGG | - | chr5_1:8956559-8956578 | None:intergenic | 25.0% |
| ! | GAAGTAAAATGTTTAACCTA+AGG | - | chr5_1:8956700-8956719 | None:intergenic | 25.0% |
| ! | GACACTTAAAAAGAAATGAA+TGG | - | chr5_1:8956773-8956792 | None:intergenic | 25.0% |
| ! | ACAAATCTAAGCTTGTATTT+CGG | - | chr5_1:8956846-8956865 | None:intergenic | 25.0% |
| !!! | TGCACTTATTTTCATAAAGA+CGG | + | chr5_1:8956900-8956919 | Msa0715790:intron | 25.0% |
| ! | ATAGTGTCATGAGTAATTAA+TGG | + | chr5_1:8957088-8957107 | Msa0715790:intron | 25.0% |
| !!! | AATTTCCTAGCCTTATATTT+AGG | + | chr5_1:8957149-8957168 | Msa0715790:intron | 25.0% |
| ! | TTATAAAACCGGCAAAATTA+AGG | + | chr5_1:8957582-8957601 | Msa0715790:intron | 25.0% |
| ! | TATAAAACCGGCAAAATTAA+GGG | + | chr5_1:8957583-8957602 | Msa0715790:intron | 25.0% |
| !!! | TAATGCTAAGAACAGTTTTT+TGG | + | chr5_1:8958271-8958290 | Msa0715790:intron | 25.0% |
| !!! | AAAATACTAAGGCTTTGTTT+GGG | - | chr5_1:8958541-8958560 | None:intergenic | 25.0% |
| ! | TCATAGCATACAAAATACTA+AGG | - | chr5_1:8958552-8958571 | None:intergenic | 25.0% |
| !!! | TTGATATCAGATCTTTTTTG+GGG | - | chr5_1:8958862-8958881 | None:intergenic | 25.0% |
| !!! | CATTGATATCAGATCTTTTT+TGG | - | chr5_1:8958864-8958883 | None:intergenic | 25.0% |
| !! | ACTTTCTCTATTAGAGATTT+TGG | + | chr5_1:8959196-8959215 | Msa0715790:exon | 25.0% |
| ! | GCATCTTAAAATTCCTATAA+TGG | - | chr5_1:8959238-8959257 | None:intergenic | 25.0% |
| !! | AATCCAAGTTTCTTTGGTTT+TGG | - | chr5_1:8947923-8947942 | None:intergenic | 30.0% |
| TTGAACAATCCAAGTTTCTT+TGG | - | chr5_1:8947929-8947948 | None:intergenic | 30.0% | |
| TTGAATTTATCAGAAGGAGA+AGG | + | chr5_1:8948086-8948105 | Msa0715790:CDS | 30.0% | |
| TTGTTTGATGAGATTGAGAA+GGG | - | chr5_1:8948376-8948395 | None:intergenic | 30.0% | |
| !!! | GTTGAAGAATTTTGATGATG+AGG | - | chr5_1:8948425-8948444 | None:intergenic | 30.0% |
| ! | AAACCTTGCAAGGTATTATT+AGG | - | chr5_1:8948473-8948492 | None:intergenic | 30.0% |
| TGTCCAAAATTACCAGAATT+TGG | - | chr5_1:8948497-8948516 | None:intergenic | 30.0% | |
| ! | GTAATTTTGGACAATTCACA+TGG | + | chr5_1:8948504-8948523 | Msa0715790:CDS | 30.0% |
| AATAGTACTACTACTCAAGA+AGG | + | chr5_1:8948527-8948546 | Msa0715790:CDS | 30.0% | |
| GCATTGAATTTACAATTGCA+AGG | + | chr5_1:8948764-8948783 | Msa0715790:CDS | 30.0% | |
| TTGAATTTACAATTGCAAGG+AGG | + | chr5_1:8948767-8948786 | Msa0715790:CDS | 30.0% | |
| ATAGGATTGAACATCAAAGA+AGG | + | chr5_1:8949065-8949084 | Msa0715790:CDS | 30.0% | |
| TGAAGAAAAATATATGGGGA+GGG | - | chr5_1:8949321-8949340 | None:intergenic | 30.0% | |
| ATGAAGAAAAATATATGGGG+AGG | - | chr5_1:8949322-8949341 | None:intergenic | 30.0% | |
| ATTATCTATGTGGTAAGATG+TGG | + | chr5_1:8949718-8949737 | Msa0715790:intron | 30.0% | |
| ATATAATCTTAGATACCAGC+CGG | - | chr5_1:8949829-8949848 | None:intergenic | 30.0% | |
| CAATCTATTTAATTGGTAGG+AGG | + | chr5_1:8949987-8950006 | Msa0715790:intron | 30.0% | |
| !! | AAATGAGAGTACTAACCATT+AGG | + | chr5_1:8950066-8950085 | Msa0715790:intron | 30.0% |
| TGCTACGTTACTTATTGATA+TGG | - | chr5_1:8950174-8950193 | None:intergenic | 30.0% | |
| GTATATTTGGATATGTAAGG+TGG | - | chr5_1:8950219-8950238 | None:intergenic | 30.0% | |
| CAAGTGAGATATCTTAACAA+AGG | - | chr5_1:8950270-8950289 | None:intergenic | 30.0% | |
| AAATTCATCCCTTATTCTAC+CGG | + | chr5_1:8950347-8950366 | Msa0715790:intron | 30.0% | |
| ! | TTCATTGCGGATTTTAAATG+GGG | - | chr5_1:8950537-8950556 | None:intergenic | 30.0% |
| TTGGGTTACCAAATATTTGT+TGG | - | chr5_1:8950632-8950651 | None:intergenic | 30.0% | |
| ATGAATATAATTGATGCAGG+TGG | + | chr5_1:8950903-8950922 | Msa0715790:intron | 30.0% | |
| CTATTGTGAACAAATGCAAA+TGG | + | chr5_1:8950942-8950961 | Msa0715790:intron | 30.0% | |
| AACTCATTTGATGTGATGAT+GGG | + | chr5_1:8950970-8950989 | Msa0715790:CDS | 30.0% | |
| ATACTGAGTAAAATTTGGGT+CGG | + | chr5_1:8951406-8951425 | Msa0715790:intron | 30.0% | |
| !! | GGTCTTACCATTTTGAAAAT+GGG | + | chr5_1:8951427-8951446 | Msa0715790:intron | 30.0% |
| ! | CGTAAAACCCATTTTCAAAA+TGG | - | chr5_1:8951437-8951456 | None:intergenic | 30.0% |
| CTCACAAAAAACGTTTACAA+AGG | - | chr5_1:8951637-8951656 | None:intergenic | 30.0% | |
| ! | TATACTGAAAATTTAGGGTG+AGG | - | chr5_1:8951696-8951715 | None:intergenic | 30.0% |
| !! | TGTAAATTTGAACTTGGTGT+AGG | + | chr5_1:8951921-8951940 | Msa0715790:intron | 30.0% |
| TGGATACGACACATAAATTA+TGG | - | chr5_1:8952305-8952324 | None:intergenic | 30.0% | |
| AACGATGTCTTATACTCTTA+TGG | - | chr5_1:8952325-8952344 | None:intergenic | 30.0% | |
| ! | AAATGTTTGAAGCAGAGTTA+AGG | + | chr5_1:8953025-8953044 | Msa0715790:intron | 30.0% |
| ! | AATGTTTGAAGCAGAGTTAA+GGG | + | chr5_1:8953026-8953045 | Msa0715790:intron | 30.0% |
| AGCTTTCATGTCTCTTTATA+TGG | + | chr5_1:8953056-8953075 | Msa0715790:intron | 30.0% | |
| CATGTCTCTTTATATGGTTA+AGG | + | chr5_1:8953062-8953081 | Msa0715790:intron | 30.0% | |
| !!! | ACTTACATCATTTTGGGTTT+TGG | + | chr5_1:8953363-8953382 | Msa0715790:intron | 30.0% |
| TGGTACATTAAAAACGTTTG+TGG | - | chr5_1:8953582-8953601 | None:intergenic | 30.0% | |
| ! | TGTTTTTCCTTTCTGTAACA+TGG | - | chr5_1:8953630-8953649 | None:intergenic | 30.0% |
| TCTCAATGAATCAGACATTT+AGG | - | chr5_1:8953659-8953678 | None:intergenic | 30.0% | |
| ! | AAGTTAAACAGCTTTAGTGT+CGG | + | chr5_1:8953723-8953742 | Msa0715790:intron | 30.0% |
| ! | TGTTATATTCTTGGTGTGAA+AGG | - | chr5_1:8954136-8954155 | None:intergenic | 30.0% |
| CAATACATATATTGACCGAT+GGG | + | chr5_1:8954188-8954207 | Msa0715790:intron | 30.0% | |
| ATTATTGTTTCAAGACCCAT+CGG | - | chr5_1:8954206-8954225 | None:intergenic | 30.0% | |
| GGAAAACTATAGAGTATATG+CGG | + | chr5_1:8954660-8954679 | Msa0715790:intron | 30.0% | |
| !!! | GGTGAGTTTTGTTTAATTGT+TGG | - | chr5_1:8954904-8954923 | None:intergenic | 30.0% |
| !!! | TTTGTATGTTTTGGGTTTGA+AGG | - | chr5_1:8955064-8955083 | None:intergenic | 30.0% |
| AAAGTCATTGCTACTGTTTA+TGG | - | chr5_1:8955409-8955428 | None:intergenic | 30.0% | |
| ATAAACAGTAGCAATGACTT+TGG | + | chr5_1:8955408-8955427 | Msa0715790:intron | 30.0% | |
| ! | GTTTAGAGTGGAAACAAAAT+AGG | + | chr5_1:8955847-8955866 | Msa0715790:intron | 30.0% |
| AATCAAGGAAACAAATTGGA+CGG | - | chr5_1:8955918-8955937 | None:intergenic | 30.0% | |
| AGGAAATCAAGGAAACAAAT+TGG | - | chr5_1:8955922-8955941 | None:intergenic | 30.0% | |
| ACCCTAATAAAAGGAAATCA+AGG | - | chr5_1:8955933-8955952 | None:intergenic | 30.0% | |
| AAACAGTAATTGTAGCCATT+AGG | + | chr5_1:8956014-8956033 | Msa0715790:intron | 30.0% | |
| AACAGTAATTGTAGCCATTA+GGG | + | chr5_1:8956015-8956034 | Msa0715790:intron | 30.0% | |
| AAACAGTAATTGTAGCCATT+AGG | + | chr5_1:8956014-8956033 | Msa0715790:intron | 30.0% | |
| AACAGTAATTGTAGCCATTA+GGG | + | chr5_1:8956015-8956034 | Msa0715790:intron | 30.0% | |
| TCACAATTAATTATGCCATG+AGG | - | chr5_1:8956286-8956305 | None:intergenic | 30.0% | |
| TAAGTAGTGAAGCAAGAAAT+GGG | + | chr5_1:8956323-8956342 | Msa0715790:intron | 30.0% | |
| !!! | GACATAAAAATGTGCTGTTT+TGG | + | chr5_1:8956345-8956364 | Msa0715790:intron | 30.0% |
| TGTTTGTCTAGTCTAAATTG+AGG | + | chr5_1:8956656-8956675 | Msa0715790:intron | 30.0% | |
| ! | ATCAAATTTTGTCGAGTACA+AGG | - | chr5_1:8956737-8956756 | None:intergenic | 30.0% |
| !!! | TTTCTGGATTTTGGTTTATG+TGG | - | chr5_1:8957033-8957052 | None:intergenic | 30.0% |
| AAGGCTAGGAAATTAATTGT+AGG | - | chr5_1:8957143-8957162 | None:intergenic | 30.0% | |
| TACATGTAGGCCTAAATATA+AGG | - | chr5_1:8957162-8957181 | None:intergenic | 30.0% | |
| ATAAAACCGGCAAAATTAAG+GGG | + | chr5_1:8957584-8957603 | Msa0715790:intron | 30.0% | |
| ! | TTTAGCCTTCAATTATACTC+GGG | - | chr5_1:8957618-8957637 | None:intergenic | 30.0% |
| ! | GTTTAGCCTTCAATTATACT+CGG | - | chr5_1:8957619-8957638 | None:intergenic | 30.0% |
| !!! | ACAAGCTTTTTTAAGTGTTG+TGG | - | chr5_1:8957654-8957673 | None:intergenic | 30.0% |
| !! | TAACAATAGTCATTTGGTGT+CGG | + | chr5_1:8957710-8957729 | Msa0715790:intron | 30.0% |
| TAACGATTGAACACAAAGTT+CGG | - | chr5_1:8957746-8957765 | None:intergenic | 30.0% | |
| TAGAGTAAGCAAATAAGTCT+TGG | - | chr5_1:8957808-8957827 | None:intergenic | 30.0% | |
| AATCCATATGCATAACACAT+AGG | - | chr5_1:8957890-8957909 | None:intergenic | 30.0% | |
| ATGTGTTATGCATATGGATT+TGG | + | chr5_1:8957890-8957909 | Msa0715790:intron | 30.0% | |
| !! | TATATCTCTTAGGCTTTGTT+TGG | + | chr5_1:8958055-8958074 | Msa0715790:intron | 30.0% |
| !! | ATATCTCTTAGGCTTTGTTT+GGG | + | chr5_1:8958056-8958075 | Msa0715790:intron | 30.0% |
| GAACTCAAAAATTGTATTGG+GGG | - | chr5_1:8958391-8958410 | None:intergenic | 30.0% | |
| GGAACTCAAAAATTGTATTG+GGG | - | chr5_1:8958392-8958411 | None:intergenic | 30.0% | |
| GGGAACTCAAAAATTGTATT+GGG | - | chr5_1:8958393-8958412 | None:intergenic | 30.0% | |
| ATAAAAAATCCCCCTCATTT+GGG | - | chr5_1:8958415-8958434 | None:intergenic | 30.0% | |
| AATAAAAAATCCCCCTCATT+TGG | - | chr5_1:8958416-8958435 | None:intergenic | 30.0% | |
| TGGAAGAAATAGAAGACATT+GGG | - | chr5_1:8958473-8958492 | None:intergenic | 30.0% | |
| !! | CAAAATACTAAGGCTTTGTT+TGG | - | chr5_1:8958542-8958561 | None:intergenic | 30.0% |
| TACACAGATAATTCATACAC+CGG | - | chr5_1:8958591-8958610 | None:intergenic | 30.0% | |
| TATCTGTGTATTGTGTTGAA+TGG | + | chr5_1:8958601-8958620 | Msa0715790:intron | 30.0% | |
| ! | TCTTCTTCTTCTTCTTTTTC+AGG | + | chr5_1:8958645-8958664 | Msa0715790:intron | 30.0% |
| !!! | TTCTTTTTCAGGTATCAAAC+TGG | + | chr5_1:8958656-8958675 | Msa0715790:intron | 30.0% |
| ! | TATTGATTGCAACTAGTGAA+GGG | - | chr5_1:8958900-8958919 | None:intergenic | 30.0% |
| ! | TTATTGATTGCAACTAGTGA+AGG | - | chr5_1:8958901-8958920 | None:intergenic | 30.0% |
| TTGGATCATCAACTCTTATT+AGG | + | chr5_1:8959097-8959116 | Msa0715790:CDS | 30.0% | |
| TCATCAACTCTTATTAGGTT+TGG | + | chr5_1:8959102-8959121 | Msa0715790:CDS | 30.0% | |
| CATCAACTCTTATTAGGTTT+GGG | + | chr5_1:8959103-8959122 | Msa0715790:CDS | 30.0% | |
| TGCAGCATCAAATTAAAACA+CGG | + | chr5_1:8959272-8959291 | Msa0715790:three_prime_UTR | 30.0% | |
| GAAGAAGAAGAAGAAGGAAA+TGG | - | chr5_1:8947876-8947895 | None:intergenic | 35.0% | |
| ATGGAAGAAGAAGAAGAAGA+AGG | - | chr5_1:8947882-8947901 | None:intergenic | 35.0% | |
| GTGTGTCTTCAAGTAAACAA+TGG | - | chr5_1:8947901-8947920 | None:intergenic | 35.0% | |
| ACACCAAAACCAAAGAAACT+TGG | + | chr5_1:8947917-8947936 | Msa0715790:CDS | 35.0% | |
| ! | GATTGCTTGCTGATAATCTT+GGG | - | chr5_1:8947967-8947986 | None:intergenic | 35.0% |
| ! | AGATTGCTTGCTGATAATCT+TGG | - | chr5_1:8947968-8947987 | None:intergenic | 35.0% |
| GATTATCAGCAAGCAATCTT+CGG | + | chr5_1:8947969-8947988 | Msa0715790:CDS | 35.0% | |
| CAAGGGTTGAATTTATCAGA+AGG | + | chr5_1:8948080-8948099 | Msa0715790:CDS | 35.0% | |
| TCTAACAATTCAGCTGTTGA+AGG | - | chr5_1:8948176-8948195 | None:intergenic | 35.0% | |
| ! | CAATCATTTTCTGAACCTGT+TGG | - | chr5_1:8948251-8948270 | None:intergenic | 35.0% |
| CAACAGGTTCAGAAAATGAT+TGG | + | chr5_1:8948249-8948268 | Msa0715790:CDS | 35.0% | |
| GGTTCAGAAAATGATTGGTA+TGG | + | chr5_1:8948254-8948273 | Msa0715790:CDS | 35.0% | |
| TGGTATGGTAATAACAGACA+AGG | + | chr5_1:8948269-8948288 | Msa0715790:CDS | 35.0% | |
| GGTATGGTAATAACAGACAA+GGG | + | chr5_1:8948270-8948289 | Msa0715790:CDS | 35.0% | |
| GTTCATGAGAAAAAGTTGCA+TGG | - | chr5_1:8948354-8948373 | None:intergenic | 35.0% | |
| GTTGTTTGATGAGATTGAGA+AGG | - | chr5_1:8948377-8948396 | None:intergenic | 35.0% | |
| !!! | GAAGAATTTTGATGATGAGG+TGG | - | chr5_1:8948422-8948441 | None:intergenic | 35.0% |
| AGGTATTATTAGGAGGGTTA+GGG | - | chr5_1:8948463-8948482 | None:intergenic | 35.0% | |
| ! | AAGGTATTATTAGGAGGGTT+AGG | - | chr5_1:8948464-8948483 | None:intergenic | 35.0% |
| ! | CTTGCAAGGTATTATTAGGA+GGG | - | chr5_1:8948469-8948488 | None:intergenic | 35.0% |
| AGAATTTGGAAAACCTTGCA+AGG | - | chr5_1:8948483-8948502 | None:intergenic | 35.0% | |
| ! | TTGCAAGGTTTTCCAAATTC+TGG | + | chr5_1:8948482-8948501 | Msa0715790:CDS | 35.0% |
| TACAATATTCAAGGTGGAAG+TGG | + | chr5_1:8948695-8948714 | Msa0715790:CDS | 35.0% | |
| TACGGATATGATGAAGAAGA+TGG | - | chr5_1:8948725-8948744 | None:intergenic | 35.0% | |
| AATTTACAATTGCAAGGAGG+AGG | + | chr5_1:8948770-8948789 | Msa0715790:CDS | 35.0% | |
| ATTTACAATTGCAAGGAGGA+GGG | + | chr5_1:8948771-8948790 | Msa0715790:CDS | 35.0% | |
| CAAAGTCATAATCAAGGTCA+AGG | + | chr5_1:8948818-8948837 | Msa0715790:CDS | 35.0% | |
| CATAATCAAGGTCAAGGATA+TGG | + | chr5_1:8948824-8948843 | Msa0715790:CDS | 35.0% | |
| TCTTGAAGCAATTCTTGAGT+AGG | - | chr5_1:8948893-8948912 | None:intergenic | 35.0% | |
| CATTGGAGGAACAATTGTTA+GGG | - | chr5_1:8948982-8949001 | None:intergenic | 35.0% | |
| ACATTGGAGGAACAATTGTT+AGG | - | chr5_1:8948983-8949002 | None:intergenic | 35.0% | |
| AACAATTGTTCCTCCAATGT+TGG | + | chr5_1:8948983-8949002 | Msa0715790:CDS | 35.0% | |
| ATTAGAATCACCAACATTGG+AGG | - | chr5_1:8948996-8949015 | None:intergenic | 35.0% | |
| AGGATTAGAATCACCAACAT+TGG | - | chr5_1:8948999-8949018 | None:intergenic | 35.0% | |
| ! | GTGTCTTTTGATGAAGAAGA+AGG | - | chr5_1:8949019-8949038 | None:intergenic | 35.0% |
| CTTTGATGTTCAATCCTATC+AGG | - | chr5_1:8949064-8949083 | None:intergenic | 35.0% | |
| GATTGAACATCAAAGAAGGA+AGG | + | chr5_1:8949069-8949088 | Msa0715790:CDS | 35.0% | |
| AAGAAAAATATATGGGGAGG+GGG | - | chr5_1:8949319-8949338 | None:intergenic | 35.0% | |
| GAAGAAAAATATATGGGGAG+GGG | - | chr5_1:8949320-8949339 | None:intergenic | 35.0% | |
| CACATGCATTTAACCTGATA+TGG | + | chr5_1:8949642-8949661 | Msa0715790:intron | 35.0% | |
| TCTATTTAATTGGTAGGAGG+AGG | + | chr5_1:8949990-8950009 | Msa0715790:intron | 35.0% | |
| CTATTTAATTGGTAGGAGGA+GGG | + | chr5_1:8949991-8950010 | Msa0715790:intron | 35.0% | |
| TGGTTAGTACTCTCATTTCA+TGG | - | chr5_1:8950064-8950083 | None:intergenic | 35.0% | |
| CTCACTCACTTGTTCAATAT+TGG | + | chr5_1:8950144-8950163 | Msa0715790:intron | 35.0% | |
| GTTAAGATATCTCACTTGAC+AGG | + | chr5_1:8950272-8950291 | Msa0715790:intron | 35.0% | |
| ATAGAGAACCGGTAGAATAA+GGG | - | chr5_1:8950358-8950377 | None:intergenic | 35.0% | |
| AATAGAGAACCGGTAGAATA+AGG | - | chr5_1:8950359-8950378 | None:intergenic | 35.0% | |
| GAACTCATTTGATGTGATGA+TGG | + | chr5_1:8950969-8950988 | Msa0715790:CDS | 35.0% | |
| !!! | TTTGATGTGATGATGGGTTT+TGG | + | chr5_1:8950976-8950995 | Msa0715790:CDS | 35.0% |
| ! | AAGCAATGTCTCGACATTTT+CGG | + | chr5_1:8951031-8951050 | Msa0715790:CDS | 35.0% |
| AAGCAAAGTTGTGAGTTACT+AGG | + | chr5_1:8951084-8951103 | Msa0715790:CDS | 35.0% | |
| ! | GAAATGCTCTTTGTTGTCTT+AGG | - | chr5_1:8951179-8951198 | None:intergenic | 35.0% |
| CAGTATAAAAGAGTGAGTGT+TGG | - | chr5_1:8951392-8951411 | None:intergenic | 35.0% | |
| !! | CGGTCTTACCATTTTGAAAA+TGG | + | chr5_1:8951426-8951445 | Msa0715790:intron | 35.0% |
| ! | GAAAATTTAGGGTGAGGAAA+TGG | - | chr5_1:8951690-8951709 | None:intergenic | 35.0% |
| ! | GACTGACTTAAAAAAGCCAA+TGG | - | chr5_1:8951952-8951971 | None:intergenic | 35.0% |
| AAAGGTAACCCACAATACTA+AGG | + | chr5_1:8952197-8952216 | Msa0715790:intron | 35.0% | |
| TCACAGTACCTTAGTATTGT+GGG | - | chr5_1:8952208-8952227 | None:intergenic | 35.0% | |
| ATCACAGTACCTTAGTATTG+TGG | - | chr5_1:8952209-8952228 | None:intergenic | 35.0% | |
| ! | AGGTACTGTGATCATTAACA+AGG | + | chr5_1:8952217-8952236 | Msa0715790:intron | 35.0% |
| TTAACAAGGAAAAAAGCAGC+AGG | + | chr5_1:8952231-8952250 | Msa0715790:intron | 35.0% | |
| TAACAAGGAAAAAAGCAGCA+GGG | + | chr5_1:8952232-8952251 | Msa0715790:intron | 35.0% | |
| ACAATTCACAGGATCTATCT+AGG | - | chr5_1:8952604-8952623 | None:intergenic | 35.0% | |
| CTCTTTATATGGTTAAGGGA+AGG | + | chr5_1:8953067-8953086 | Msa0715790:intron | 35.0% | |
| ! | TTTCTTTTGGTCTCTTTCTC+AGG | + | chr5_1:8953103-8953122 | Msa0715790:intron | 35.0% |
| TGATGCAGATAAGCATCTAT+TGG | + | chr5_1:8953134-8953153 | Msa0715790:CDS | 35.0% | |
| ATCGGTTACAAAACCTAACA+GGG | - | chr5_1:8953773-8953792 | None:intergenic | 35.0% | |
| !!! | TTTTTTACGCAAATGTCTGC+AGG | - | chr5_1:8953926-8953945 | None:intergenic | 35.0% |
| CCATCGGTCAATATATGTAT+TGG | - | chr5_1:8954190-8954209 | None:intergenic | 35.0% | |
| CCAATACATATATTGACCGA+TGG | + | chr5_1:8954187-8954206 | Msa0715790:intron | 35.0% | |
| GATGGGTCTTGAAACAATAA+TGG | + | chr5_1:8954205-8954224 | Msa0715790:intron | 35.0% | |
| TGAATGTTTGCAGGTGAATT+GGG | - | chr5_1:8954254-8954273 | None:intergenic | 35.0% | |
| TTGAATGTTTGCAGGTGAAT+TGG | - | chr5_1:8954255-8954274 | None:intergenic | 35.0% | |
| TACCTTGTAGAGAAAGAGTA+GGG | + | chr5_1:8954683-8954702 | Msa0715790:intron | 35.0% | |
| TATGGGAATCATTACCTTGA+CGG | + | chr5_1:8954723-8954742 | Msa0715790:intron | 35.0% | |
| AGACTGAATTGTGAACATCA+TGG | - | chr5_1:8954960-8954979 | None:intergenic | 35.0% | |
| ! | TGATTGTAAAGTACCTCTCT+AGG | + | chr5_1:8955382-8955401 | Msa0715790:intron | 35.0% |
| ! | GATTGTAAAGTACCTCTCTA+GGG | + | chr5_1:8955383-8955402 | Msa0715790:intron | 35.0% |
| TGCATAAAGAGGAGAAAAGA+TGG | + | chr5_1:8955590-8955609 | Msa0715790:intron | 35.0% | |
| GAAAACAACAGTACTTCCAT+GGG | + | chr5_1:8955665-8955684 | Msa0715790:intron | 35.0% | |
| TAGAAGCAGATAGTTTAGAG+TGG | + | chr5_1:8955835-8955854 | Msa0715790:intron | 35.0% | |
| ! | AATTGTAGCCATTAGGGTTT+TGG | + | chr5_1:8956021-8956040 | Msa0715790:intron | 35.0% |
| ! | AATTGTAGCCATTAGGGTTT+TGG | + | chr5_1:8956021-8956040 | Msa0715790:intron | 35.0% |
| TTGTTGGAACATTTACCTCA+TGG | + | chr5_1:8956268-8956287 | Msa0715790:intron | 35.0% | |
| GTAAGTAGTGAAGCAAGAAA+TGG | + | chr5_1:8956322-8956341 | Msa0715790:intron | 35.0% | |
| AGTCAAGAGAGTGAGTTAAT+TGG | - | chr5_1:8956373-8956392 | None:intergenic | 35.0% | |
| TGTGAGAGACAATGTCAAAA+AGG | - | chr5_1:8956408-8956427 | None:intergenic | 35.0% | |
| TGGTTACCAATTGTATGGTT+GGG | - | chr5_1:8956446-8956465 | None:intergenic | 35.0% | |
| ATGGTTACCAATTGTATGGT+TGG | - | chr5_1:8956447-8956466 | None:intergenic | 35.0% | |
| TGGGAAATAAATGTGTGGTT+TGG | + | chr5_1:8956472-8956491 | Msa0715790:intron | 35.0% | |
| GGGAAATAAATGTGTGGTTT+GGG | + | chr5_1:8956473-8956492 | Msa0715790:intron | 35.0% | |
| GGAAATAAATGTGTGGTTTG+GGG | + | chr5_1:8956474-8956493 | Msa0715790:intron | 35.0% | |
| GTTCTTAAAACCCTAACTTG+GGG | - | chr5_1:8956537-8956556 | None:intergenic | 35.0% | |
| GGTTCTTAAAACCCTAACTT+GGG | - | chr5_1:8956538-8956557 | None:intergenic | 35.0% | |
| AGGTTCTTAAAACCCTAACT+TGG | - | chr5_1:8956539-8956558 | None:intergenic | 35.0% | |
| !! | CTAAGGTCAAAGAGTATTTG+AGG | - | chr5_1:8956683-8956702 | None:intergenic | 35.0% |
| CTCAAATACTCTTTGACCTT+AGG | + | chr5_1:8956681-8956700 | Msa0715790:intron | 35.0% | |
| !!! | TGTCGAGTACAAGGTTTTTT+TGG | - | chr5_1:8956728-8956747 | None:intergenic | 35.0% |
| ! | TAAGCTTGTATTTCGGTTTG+AGG | - | chr5_1:8956839-8956858 | None:intergenic | 35.0% |
| !! | GCAAGAAAGTTTCTGGATTT+TGG | - | chr5_1:8957042-8957061 | None:intergenic | 35.0% |
| ATAGATGACCTCTTTAAGTC+TGG | - | chr5_1:8957221-8957240 | None:intergenic | 35.0% | |
| GGCTTAGCTCATTATAAAAC+CGG | + | chr5_1:8957571-8957590 | Msa0715790:intron | 35.0% | |
| TGAAGGCTAAACTTGTAAAC+CGG | + | chr5_1:8957627-8957646 | Msa0715790:intron | 35.0% | |
| !!! | CTTTTTTAAGTGTTGTGGTC+CGG | - | chr5_1:8957649-8957668 | None:intergenic | 35.0% |
| TCAGACTGATCCATTAAGAT+TGG | + | chr5_1:8957941-8957960 | Msa0715790:intron | 35.0% | |
| ACTGATCCATTAAGATTGGA+CGG | + | chr5_1:8957945-8957964 | Msa0715790:intron | 35.0% | |
| TCAAAAATTGTATTGGGGGA+GGG | - | chr5_1:8958387-8958406 | None:intergenic | 35.0% | |
| GGGGAACTCAAAAATTGTAT+TGG | - | chr5_1:8958394-8958413 | None:intergenic | 35.0% | |
| TAAAAAATCCCCCTCATTTG+GGG | - | chr5_1:8958414-8958433 | None:intergenic | 35.0% | |
| AAGAAATAGAAGACATTGGG+AGG | - | chr5_1:8958470-8958489 | None:intergenic | 35.0% | |
| GTGGAAGAAATAGAAGACAT+TGG | - | chr5_1:8958474-8958493 | None:intergenic | 35.0% | |
| !!! | GAGGGTTTTGGAAAAAATGA+AGG | - | chr5_1:8958502-8958521 | None:intergenic | 35.0% |
| TGAGATTTGTAAAACTCCAC+CGG | + | chr5_1:8958569-8958588 | Msa0715790:intron | 35.0% | |
| ! | AAACTGGTTCATAAATGCCA+GGG | + | chr5_1:8958672-8958691 | Msa0715790:CDS | 35.0% |
| CTGCTTCATTAAGTTCTTGT+TGG | - | chr5_1:8958732-8958751 | None:intergenic | 35.0% | |
| ACAAGAACTTAATGAAGCAG+AGG | + | chr5_1:8958732-8958751 | Msa0715790:CDS | 35.0% | |
| !!! | ATATCAGATCTTTTTTGGGG+TGG | - | chr5_1:8958859-8958878 | None:intergenic | 35.0% |
| GTTGCAGAAGATTATGAAAC+AGG | + | chr5_1:8959066-8959085 | Msa0715790:CDS | 35.0% | |
| ! | TATGAAACAGGTTCTGACAT+TGG | + | chr5_1:8959078-8959097 | Msa0715790:CDS | 35.0% |
| AGATCCAAAGGGACAAAGTT+AGG | + | chr5_1:8948051-8948070 | Msa0715790:CDS | 40.0% | |
| ACAAAGTTAGGCTGCTACAA+GGG | + | chr5_1:8948063-8948082 | Msa0715790:CDS | 40.0% | |
| !! | TTTTCTGAACCTGTTGGTTG+TGG | - | chr5_1:8948245-8948264 | None:intergenic | 40.0% |
| !!! | GAATTTTGATGATGAGGTGG+TGG | - | chr5_1:8948419-8948438 | None:intergenic | 40.0% |
| ! | CCTTGCAAGGTATTATTAGG+AGG | - | chr5_1:8948470-8948489 | None:intergenic | 40.0% |
| CCTCCTAATAATACCTTGCA+AGG | + | chr5_1:8948467-8948486 | Msa0715790:CDS | 40.0% | |
| AGTACTACTACTCAAGAAGG+AGG | + | chr5_1:8948530-8948549 | Msa0715790:CDS | 40.0% | |
| AATATTCAAGGTGGAAGTGG+AGG | + | chr5_1:8948698-8948717 | Msa0715790:CDS | 40.0% | |
| ! | CTTCAAGAGTTTTGCAGTGT+TGG | + | chr5_1:8948905-8948924 | Msa0715790:CDS | 40.0% |
| !! | AAGAGTTTTGCAGTGTTGGA+AGG | + | chr5_1:8948909-8948928 | Msa0715790:CDS | 40.0% |
| !! | AGAGTTTTGCAGTGTTGGAA+GGG | + | chr5_1:8948910-8948929 | Msa0715790:CDS | 40.0% |
| ATTACATGCCTCATCAAGCA+TGG | - | chr5_1:8949107-8949126 | None:intergenic | 40.0% | |
| AGAAAAATATATGGGGAGGG+GGG | - | chr5_1:8949318-8949337 | None:intergenic | 40.0% | |
| TAGGAATATCCTCCTTGCAT+AGG | + | chr5_1:8949908-8949927 | Msa0715790:intron | 40.0% | |
| !! | CTTGCATAGGATTAGTTGGT+GGG | + | chr5_1:8949921-8949940 | Msa0715790:intron | 40.0% |
| !! | TTGCATAGGATTAGTTGGTG+GGG | + | chr5_1:8949922-8949941 | Msa0715790:intron | 40.0% |
| GACGTATTCTCTTCTCCTAA+TGG | - | chr5_1:8950084-8950103 | None:intergenic | 40.0% | |
| ! | CGGATTTTAAATGGGGTTGA+TGG | - | chr5_1:8950530-8950549 | None:intergenic | 40.0% |
| TATAATTGATGCAGGTGGAC+AGG | + | chr5_1:8950908-8950927 | Msa0715790:intron | 40.0% | |
| ! | TTTTGTGCTAGTGCTGTGTA+TGG | - | chr5_1:8951012-8951031 | None:intergenic | 40.0% |
| !!! | TCGACATTTTCGGTGTCTAA+AGG | + | chr5_1:8951041-8951060 | Msa0715790:CDS | 40.0% |
| GAGTTACTAGGAGAGAAAGA+AGG | + | chr5_1:8951096-8951115 | Msa0715790:CDS | 40.0% | |
| TTCAAGTACCTTAAGCCTAG+GGG | - | chr5_1:8951151-8951170 | None:intergenic | 40.0% | |
| GTTCAAGTACCTTAAGCCTA+GGG | - | chr5_1:8951152-8951171 | None:intergenic | 40.0% | |
| TGTTCAAGTACCTTAAGCCT+AGG | - | chr5_1:8951153-8951172 | None:intergenic | 40.0% | |
| !! | ACAAAGAGCATTTCACCAGA+TGG | + | chr5_1:8951185-8951204 | Msa0715790:CDS | 40.0% |
| !! | CAAAGAGCATTTCACCAGAT+GGG | + | chr5_1:8951186-8951205 | Msa0715790:CDS | 40.0% |
| ATTTCACCAGATGGGTATGA+TGG | + | chr5_1:8951194-8951213 | Msa0715790:CDS | 40.0% | |
| !! | GTATGATGGATCAAGAAGCT+TGG | + | chr5_1:8951208-8951227 | Msa0715790:CDS | 40.0% |
| AACACATTGACAGAACGATC+AGG | - | chr5_1:8951252-8951271 | None:intergenic | 40.0% | |
| GAAAAGACGCGATAACTTAC+GGG | - | chr5_1:8951305-8951324 | None:intergenic | 40.0% | |
| GGAAAAGACGCGATAACTTA+CGG | - | chr5_1:8951306-8951325 | None:intergenic | 40.0% | |
| TTACATTAAGCCCCCTCTAA+AGG | - | chr5_1:8951611-8951630 | None:intergenic | 40.0% | |
| !!! | AAACGTTTTTTGTGAGCCGA+AGG | + | chr5_1:8951641-8951660 | Msa0715790:intron | 40.0% |
| ACCAAAAAGTAGAGCTAGCT+AGG | + | chr5_1:8952113-8952132 | Msa0715790:intron | 40.0% | |
| !!! | ACCTAGCTAGCTCTACTTTT+TGG | - | chr5_1:8952117-8952136 | None:intergenic | 40.0% |
| ATGTTGTCTTACCAGCAGAA+AGG | + | chr5_1:8952376-8952395 | Msa0715790:intron | 40.0% | |
| CTGACATTGCAGAAGTAAAG+AGG | - | chr5_1:8952944-8952963 | None:intergenic | 40.0% | |
| ACTTCTGCAATGTCAGCAAT+AGG | + | chr5_1:8952948-8952967 | Msa0715790:intron | 40.0% | |
| AGATGCTTATCTGCATCACT+TGG | - | chr5_1:8953132-8953151 | None:intergenic | 40.0% | |
| ATCTATTGGCACGACAAACT+GGG | + | chr5_1:8953148-8953167 | Msa0715790:CDS | 40.0% | |
| GTATACTCTACACTGCATTG+TGG | - | chr5_1:8953209-8953228 | None:intergenic | 40.0% | |
| ACATCGACCATGTTACAGAA+AGG | + | chr5_1:8953620-8953639 | Msa0715790:intron | 40.0% | |
| !! | TGTTTAACTTGCTCGAATGC+TGG | - | chr5_1:8953713-8953732 | None:intergenic | 40.0% |
| !! | TAAACAGCTTTAGTGTCGGT+AGG | + | chr5_1:8953727-8953746 | Msa0715790:intron | 40.0% |
| ! | CATCGGTTACAAAACCTAAC+AGG | - | chr5_1:8953774-8953793 | None:intergenic | 40.0% |
| AACTCTGTGGTTGTTGAACA+TGG | - | chr5_1:8953811-8953830 | None:intergenic | 40.0% | |
| CTCTGATAGCATTAACTCTG+TGG | - | chr5_1:8953824-8953843 | None:intergenic | 40.0% | |
| CACAGAGTTAATGCTATCAG+AGG | + | chr5_1:8953822-8953841 | Msa0715790:intron | 40.0% | |
| TTAAGACTTGTCTTGCTGGT+TGG | + | chr5_1:8953850-8953869 | Msa0715790:intron | 40.0% | |
| !! | TCGTTGTCGATTTGTGTTCA+CGG | - | chr5_1:8954346-8954365 | None:intergenic | 40.0% |
| GTACCTTGTAGAGAAAGAGT+AGG | + | chr5_1:8954682-8954701 | Msa0715790:intron | 40.0% | |
| ACCTTGTAGAGAAAGAGTAG+GGG | + | chr5_1:8954684-8954703 | Msa0715790:intron | 40.0% | |
| AAAATGAATCGTCGCCGAAA+TGG | + | chr5_1:8954749-8954768 | Msa0715790:intron | 40.0% | |
| AAATGAATCGTCGCCGAAAT+GGG | + | chr5_1:8954750-8954769 | Msa0715790:intron | 40.0% | |
| ! | GTCACTGTGACTTTGAGTTA+TGG | + | chr5_1:8954775-8954794 | Msa0715790:intron | 40.0% |
| !! | TTTCTTGCTGGCTTTGAACT+TGG | - | chr5_1:8954809-8954828 | None:intergenic | 40.0% |
| GTATCCCTTATCTACCTCTA+GGG | - | chr5_1:8954839-8954858 | None:intergenic | 40.0% | |
| TGTATCCCTTATCTACCTCT+AGG | - | chr5_1:8954840-8954859 | None:intergenic | 40.0% | |
| GGTATTACCCATCTCGAAAA+TGG | + | chr5_1:8955429-8955448 | Msa0715790:intron | 40.0% | |
| AAGTATCTACCCATCAGCTT+TGG | + | chr5_1:8955526-8955545 | Msa0715790:intron | 40.0% | |
| CTGATGTATCCAAAGCTGAT+GGG | - | chr5_1:8955538-8955557 | None:intergenic | 40.0% | |
| TCTTTATGCAATCCTGGATG+CGG | - | chr5_1:8955580-8955599 | None:intergenic | 40.0% | |
| TTCTCCTCTTTATGCAATCC+TGG | - | chr5_1:8955586-8955605 | None:intergenic | 40.0% | |
| GGAAAACAACAGTACTTCCA+TGG | + | chr5_1:8955664-8955683 | Msa0715790:intron | 40.0% | |
| ! | TGTTGAAGTGTCTACCAGTT+AGG | + | chr5_1:8955723-8955742 | Msa0715790:intron | 40.0% |
| TTTCTCCACTTCTTGACCTA+TGG | - | chr5_1:8955786-8955805 | None:intergenic | 40.0% | |
| ATAGGTCAAGAAGTGGAGAA+AGG | + | chr5_1:8955785-8955804 | Msa0715790:intron | 40.0% | |
| ! | GAGAAAGGATTTCTGACTTG+CGG | + | chr5_1:8955800-8955819 | Msa0715790:intron | 40.0% |
| TTAGGGCTTCAAAATTGGCT+TGG | + | chr5_1:8956049-8956068 | Msa0715790:intron | 40.0% | |
| ! | TAGGGCTTCAAAATTGGCTT+GGG | + | chr5_1:8956050-8956069 | Msa0715790:intron | 40.0% |
| TTAGGGCTTCAAAATTGGCT+TGG | + | chr5_1:8956049-8956068 | Msa0715790:intron | 40.0% | |
| ! | TAGGGCTTCAAAATTGGCTT+GGG | + | chr5_1:8956050-8956069 | Msa0715790:intron | 40.0% |
| TAAAACCCTAACTTGGGGTA+TGG | - | chr5_1:8956532-8956551 | None:intergenic | 40.0% | |
| ! | GAAAGCGTAATATGTGCCTT+TGG | + | chr5_1:8956576-8956595 | Msa0715790:intron | 40.0% |
| AATGCTAACGCATACTCCAA+AGG | - | chr5_1:8956595-8956614 | None:intergenic | 40.0% | |
| !! | TCGTTTGAGCTTTGAAGAGT+GGG | - | chr5_1:8956935-8956954 | None:intergenic | 40.0% |
| !! | ATCGTTTGAGCTTTGAAGAG+TGG | - | chr5_1:8956936-8956955 | None:intergenic | 40.0% |
| GATGCATGCAAGAAAGTTTC+TGG | - | chr5_1:8957049-8957068 | None:intergenic | 40.0% | |
| GTAGGCCTAAATATAAGGCT+AGG | - | chr5_1:8957157-8957176 | None:intergenic | 40.0% | |
| ! | CAGCAGTTTGCTTCTACAAA+AGG | - | chr5_1:8957261-8957280 | None:intergenic | 40.0% |
| TAGACTATGATTAGGCACCA+AGG | - | chr5_1:8957351-8957370 | None:intergenic | 40.0% | |
| TGCCTAATCATAGTCTAGCA+TGG | + | chr5_1:8957354-8957373 | Msa0715790:intron | 40.0% | |
| CACCATGCTAGACTATGATT+AGG | - | chr5_1:8957359-8957378 | None:intergenic | 40.0% | |
| !! | CATTTGGTGTCGGATACAAT+AGG | + | chr5_1:8957720-8957739 | Msa0715790:intron | 40.0% |
| TATGCATAACACATAGGAGC+TGG | - | chr5_1:8957884-8957903 | None:intergenic | 40.0% | |
| GCTCCTATGTGTTATGCATA+TGG | + | chr5_1:8957884-8957903 | Msa0715790:intron | 40.0% | |
| ! | TAATGGATCAGTCTGATCTC+TGG | - | chr5_1:8957937-8957956 | None:intergenic | 40.0% |
| TTTGGACCGTCCAATCTTAA+TGG | - | chr5_1:8957954-8957973 | None:intergenic | 40.0% | |
| TTGGAGTGCATTTGATTGGA+CGG | - | chr5_1:8958021-8958040 | None:intergenic | 40.0% | |
| ! | GGATTTGGAGTGCATTTGAT+TGG | - | chr5_1:8958025-8958044 | None:intergenic | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr5_1:8958063-8958082 | Msa0715790:intron | 40.0% |
| CTCAAAAATTGTATTGGGGG+AGG | - | chr5_1:8958388-8958407 | None:intergenic | 40.0% | |
| !!! | TTTTTGAGTTCCCCCAAATG+AGG | + | chr5_1:8958400-8958419 | Msa0715790:intron | 40.0% |
| !!! | TTTTGAGTTCCCCCAAATGA+GGG | + | chr5_1:8958401-8958420 | Msa0715790:intron | 40.0% |
| AAAAAATCCCCCTCATTTGG+GGG | - | chr5_1:8958413-8958432 | None:intergenic | 40.0% | |
| GGAAAAAATGAAGGAGCAAG+TGG | - | chr5_1:8958493-8958512 | None:intergenic | 40.0% | |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | - | chr5_1:8958534-8958553 | None:intergenic | 40.0% |
| ACAGATAATTCATACACCGG+TGG | - | chr5_1:8958588-8958607 | None:intergenic | 40.0% | |
| ! | CAAACTGGTTCATAAATGCC+AGG | + | chr5_1:8958671-8958690 | Msa0715790:CDS | 40.0% |
| TAAATGCCAGGGTTAGATTG+TGG | + | chr5_1:8958683-8958702 | Msa0715790:CDS | 40.0% | |
| GGTTAGATTGTGGAAACCTA+TGG | + | chr5_1:8958693-8958712 | Msa0715790:CDS | 40.0% | |
| TGGTACATCTCTTCTACCAT+AGG | - | chr5_1:8958712-8958731 | None:intergenic | 40.0% | |
| ! | CACTGTTGTTGCTATTGCTT+TGG | - | chr5_1:8958783-8958802 | None:intergenic | 40.0% |
| CAAAGCAATAGCAACAACAG+TGG | + | chr5_1:8958781-8958800 | Msa0715790:CDS | 40.0% | |
| !! | ATGTTGGTGGTGTTTGTGTT+TGG | - | chr5_1:8958810-8958829 | None:intergenic | 40.0% |
| TGATCTCTCGAATCCATTCG+AGG | - | chr5_1:8948000-8948019 | None:intergenic | 45.0% | |
| GACAAAGTTAGGCTGCTACA+AGG | + | chr5_1:8948062-8948081 | Msa0715790:CDS | 45.0% | |
| GAAGGAGAAGGAGAAGAAAG+AGG | + | chr5_1:8948098-8948117 | Msa0715790:CDS | 45.0% | |
| AGACGAAGAACGAAACGTTG+CGG | - | chr5_1:8948201-8948220 | None:intergenic | 45.0% | |
| AGACAACATCCACAACCAAC+AGG | + | chr5_1:8948233-8948252 | Msa0715790:CDS | 45.0% | |
| !!! | TTTTGATGATGAGGTGGTGG+AGG | - | chr5_1:8948416-8948435 | None:intergenic | 45.0% |
| !! | CAAGAAGGAGGTGTTGTTGA+AGG | + | chr5_1:8948542-8948561 | Msa0715790:CDS | 45.0% |
| ! | GTTGAAGGACAAGGTGTTCA+AGG | + | chr5_1:8948557-8948576 | Msa0715790:CDS | 45.0% |
| TCCCATTCGCAATTCTTCCT+CGG | - | chr5_1:8948624-8948643 | None:intergenic | 45.0% | |
| !! | GAGTTTTGCAGTGTTGGAAG+GGG | + | chr5_1:8948911-8948930 | Msa0715790:CDS | 45.0% |
| TTCCTTTGTCAGCTCCTGAT+AGG | + | chr5_1:8949047-8949066 | Msa0715790:CDS | 45.0% | |
| ATCCTATCAGGAGCTGACAA+AGG | - | chr5_1:8949052-8949071 | None:intergenic | 45.0% | |
| GCTTCTTTCCATGCTTGATG+AGG | + | chr5_1:8949096-8949115 | Msa0715790:CDS | 45.0% | |
| TGACTCTTGGTGAAGAGAGA+AGG | - | chr5_1:8949290-8949309 | None:intergenic | 45.0% | |
| TCTCTCTTCACCAAGAGTCA+AGG | + | chr5_1:8949290-8949309 | Msa0715790:intron | 45.0% | |
| GAAAAATATATGGGGAGGGG+GGG | - | chr5_1:8949317-8949336 | None:intergenic | 45.0% | |
| ! | AATTTGTTCTCTTCTCCGGC+TGG | + | chr5_1:8949811-8949830 | Msa0715790:intron | 45.0% |
| TGAGAAAGAAAAAAGCCGGC+TGG | + | chr5_1:8949880-8949899 | Msa0715790:intron | 45.0% | |
| GATATTCCTACTGTTCCAGC+CGG | - | chr5_1:8949898-8949917 | None:intergenic | 45.0% | |
| CCAACTAATCCTATGCAAGG+AGG | - | chr5_1:8949920-8949939 | None:intergenic | 45.0% | |
| ! | CCTCCTTGCATAGGATTAGT+TGG | + | chr5_1:8949917-8949936 | Msa0715790:intron | 45.0% |
| CCACCAACTAATCCTATGCA+AGG | - | chr5_1:8949923-8949942 | None:intergenic | 45.0% | |
| !! | CCTTGCATAGGATTAGTTGG+TGG | + | chr5_1:8949920-8949939 | Msa0715790:intron | 45.0% |
| !! | TGCATAGGATTAGTTGGTGG+GGG | + | chr5_1:8949923-8949942 | Msa0715790:intron | 45.0% |
| TTCCTCCTGTTTCCAACAGA+AGG | + | chr5_1:8950119-8950138 | Msa0715790:intron | 45.0% | |
| CTTGATCCATCATACCCATC+TGG | - | chr5_1:8951203-8951222 | None:intergenic | 45.0% | |
| CTGTCAATGTGTTGAGAGCT+TGG | + | chr5_1:8951259-8951278 | Msa0715790:CDS | 45.0% | |
| !! | CTAAAGGTACTAACGGAGCT+CGG | - | chr5_1:8951595-8951614 | None:intergenic | 45.0% |
| AGCTCCGTTAGTACCTTTAG+AGG | + | chr5_1:8951595-8951614 | Msa0715790:intron | 45.0% | |
| GCTCCGTTAGTACCTTTAGA+GGG | + | chr5_1:8951596-8951615 | Msa0715790:intron | 45.0% | |
| ! | CTCCGTTAGTACCTTTAGAG+GGG | + | chr5_1:8951597-8951616 | Msa0715790:intron | 45.0% |
| ! | TCCGTTAGTACCTTTAGAGG+GGG | + | chr5_1:8951598-8951617 | Msa0715790:intron | 45.0% |
| ATGGTACTCAGTCGAAGGTA+GGG | - | chr5_1:8951671-8951690 | None:intergenic | 45.0% | |
| AATGGTACTCAGTCGAAGGT+AGG | - | chr5_1:8951672-8951691 | None:intergenic | 45.0% | |
| AGGAAATGGTACTCAGTCGA+AGG | - | chr5_1:8951676-8951695 | None:intergenic | 45.0% | |
| TGCTGGTAAGACAACATCGA+AGG | - | chr5_1:8952373-8952392 | None:intergenic | 45.0% | |
| !! | GAATCTTTTGGCCTTTCTGC+TGG | - | chr5_1:8952390-8952409 | None:intergenic | 45.0% |
| TAGATTCTCACGCCCATGAA+AGG | + | chr5_1:8952995-8953014 | Msa0715790:intron | 45.0% | |
| CATCTATTGGCACGACAAAC+TGG | + | chr5_1:8953147-8953166 | Msa0715790:CDS | 45.0% | |
| AACTGGGCTATCACGAAATC+AGG | + | chr5_1:8953164-8953183 | Msa0715790:CDS | 45.0% | |
| CTGTAACATGGTCGATGTCA+TGG | - | chr5_1:8953618-8953637 | None:intergenic | 45.0% | |
| TTGACACGAACAACCCTGTT+AGG | + | chr5_1:8953757-8953776 | Msa0715790:intron | 45.0% | |
| GTTGTTGAACATGGTGAAGC+TGG | - | chr5_1:8953802-8953821 | None:intergenic | 45.0% | |
| CCAGCAAGACAAGTCTTAAG+AGG | - | chr5_1:8953849-8953868 | None:intergenic | 45.0% | |
| CCTCTTAAGACTTGTCTTGC+TGG | + | chr5_1:8953846-8953865 | Msa0715790:intron | 45.0% | |
| CAAATGTCTGCAGGATGTAC+AGG | - | chr5_1:8953917-8953936 | None:intergenic | 45.0% | |
| CTGTGTATCCAATCCTATCG+CGG | - | chr5_1:8954048-8954067 | None:intergenic | 45.0% | |
| TTACCTGCTGCAATCTGTGT+TGG | + | chr5_1:8954381-8954400 | Msa0715790:intron | 45.0% | |
| CGCACGAAAGTGAGAAATTC+GGG | - | chr5_1:8954417-8954436 | None:intergenic | 45.0% | |
| CCGCACGAAAGTGAGAAATT+CGG | - | chr5_1:8954418-8954437 | None:intergenic | 45.0% | |
| CCGAATTTCTCACTTTCGTG+CGG | + | chr5_1:8954415-8954434 | Msa0715790:intron | 45.0% | |
| ACCCCTACTCTTTCTCTACA+AGG | - | chr5_1:8954688-8954707 | None:intergenic | 45.0% | |
| ! | CGATTCATTTTCGACCGTCA+AGG | - | chr5_1:8954740-8954759 | None:intergenic | 45.0% |
| TAGGGTTCGACATTTCTTGC+TGG | - | chr5_1:8954821-8954840 | None:intergenic | 45.0% | |
| CAAGAAATGTCGAACCCTAG+AGG | + | chr5_1:8954822-8954841 | Msa0715790:intron | 45.0% | |
| TCGAACCCTAGAGGTAGATA+AGG | + | chr5_1:8954831-8954850 | Msa0715790:intron | 45.0% | |
| CGAACCCTAGAGGTAGATAA+GGG | + | chr5_1:8954832-8954851 | Msa0715790:intron | 45.0% | |
| ACATGCGCTTCTCTGTTCTA+TGG | - | chr5_1:8954994-8955013 | None:intergenic | 45.0% | |
| TACTGTTTATGGCCCTAGAG+AGG | - | chr5_1:8955398-8955417 | None:intergenic | 45.0% | |
| !!! | AGCTCTGCCATTTTCGAGAT+GGG | - | chr5_1:8955439-8955458 | None:intergenic | 45.0% |
| GCTGATGTATCCAAAGCTGA+TGG | - | chr5_1:8955539-8955558 | None:intergenic | 45.0% | |
| GCATCCAGGATTGCATAAAG+AGG | + | chr5_1:8955579-8955598 | Msa0715790:intron | 45.0% | |
| ACAACAGTACTTCCATGGGT+CGG | + | chr5_1:8955669-8955688 | Msa0715790:intron | 45.0% | |
| TCTACCAGTTAGGCAGTGAT+AGG | + | chr5_1:8955733-8955752 | Msa0715790:intron | 45.0% | |
| ATAGGAGAGGAGAGTTTCCA+TGG | + | chr5_1:8955751-8955770 | Msa0715790:intron | 45.0% | |
| CCAATTGTATGGTTGGGTGA+AGG | - | chr5_1:8956440-8956459 | None:intergenic | 45.0% | |
| CCTTCACCCAACCATACAAT+TGG | + | chr5_1:8956437-8956456 | Msa0715790:intron | 45.0% | |
| ! | AAATGTGTGGTTTGGGGATC+TGG | + | chr5_1:8956480-8956499 | Msa0715790:intron | 45.0% |
| AACCACCATACCCCAAGTTA+GGG | + | chr5_1:8956524-8956543 | Msa0715790:intron | 45.0% | |
| CCGTATAACTCACCATTGCA+GGG | - | chr5_1:8957185-8957204 | None:intergenic | 45.0% | |
| CCCTGCAATGGTGAGTTATA+CGG | + | chr5_1:8957182-8957201 | Msa0715790:intron | 45.0% | |
| CCTGCAATGGTGAGTTATAC+GGG | + | chr5_1:8957183-8957202 | Msa0715790:intron | 45.0% | |
| CTGCAATGGTGAGTTATACG+GGG | + | chr5_1:8957184-8957203 | Msa0715790:intron | 45.0% | |
| AATGGTGAGTTATACGGGGA+AGG | + | chr5_1:8957188-8957207 | Msa0715790:intron | 45.0% | |
| ! | GACCTCTTTAAGTCTGGTTC+CGG | - | chr5_1:8957215-8957234 | None:intergenic | 45.0% |
| CACACACAGAGAAGATACCT+TGG | + | chr5_1:8957331-8957350 | Msa0715790:intron | 45.0% | |
| GCTTTCAGCTTGAGTCACTA+CGG | - | chr5_1:8957518-8957537 | None:intergenic | 45.0% | |
| AATGAGCTAAGCCCAGAAGA+CGG | - | chr5_1:8957564-8957583 | None:intergenic | 45.0% | |
| GAGCTCCCGAGTATAATTGA+AGG | + | chr5_1:8957610-8957629 | Msa0715790:intron | 45.0% | |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr5_1:8958067-8958086 | Msa0715790:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr5_1:8958068-8958087 | Msa0715790:intron | 45.0% |
| ! | TTGTATTGGGGGAGGGTTTT+GGG | - | chr5_1:8958380-8958399 | None:intergenic | 45.0% |
| ! | ATTGTATTGGGGGAGGGTTT+TGG | - | chr5_1:8958381-8958400 | None:intergenic | 45.0% |
| ! | TTTGAGTTCCCCCAAATGAG+GGG | + | chr5_1:8958402-8958421 | Msa0715790:intron | 45.0% |
| TAGAAGACATTGGGAGGAGA+GGG | - | chr5_1:8958464-8958483 | None:intergenic | 45.0% | |
| ATAGAAGACATTGGGAGGAG+AGG | - | chr5_1:8958465-8958484 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr5_1:8958068-8958087 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr5_1:8958067-8958086 | None:intergenic | 45.0% |
| AGGTTTCCACAATCTAACCC+TGG | - | chr5_1:8958692-8958711 | None:intergenic | 45.0% | |
| ! | GTTGCTGTTGCTGTTGATGT+TGG | - | chr5_1:8958826-8958845 | None:intergenic | 45.0% |
| !!! | TCAGATCTTTTTTGGGGTGG+TGG | - | chr5_1:8958856-8958875 | None:intergenic | 45.0% |
| ! | TGGTTGTGGATTGCATTGCT+TGG | - | chr5_1:8958945-8958964 | None:intergenic | 45.0% |
| ATATCGACACGTGTCATCCA+TGG | - | chr5_1:8959037-8959056 | None:intergenic | 45.0% | |
| ! | ATGGATGACACGTGTCGATA+TGG | + | chr5_1:8959036-8959055 | Msa0715790:CDS | 45.0% |
| !!! | TAATTTAATAGTATTAATTT+TGG | + | chr5_1:8950016-8950035 | Msa0715790:intron | 5.0% |
| !!! | AATTTAATAGTATTAATTTT+GGG | + | chr5_1:8950017-8950036 | Msa0715790:intron | 5.0% |
| !!! | TAAATTTATATATTTTCTAA+TGG | - | chr5_1:8955329-8955348 | None:intergenic | 5.0% |
| ATCTTCGGCTTCTCCTCGAA+TGG | + | chr5_1:8947984-8948003 | Msa0715790:CDS | 50.0% | |
| AGCAGCAGCAACAGATCCAA+AGG | + | chr5_1:8948039-8948058 | Msa0715790:CDS | 50.0% | |
| GCAGCAGCAACAGATCCAAA+GGG | + | chr5_1:8948040-8948059 | Msa0715790:CDS | 50.0% | |
| GCAGCCTAACTTTGTCCCTT+TGG | - | chr5_1:8948058-8948077 | None:intergenic | 50.0% | |
| GGAGAAGGAGAAGAAAGAGG+AGG | + | chr5_1:8948101-8948120 | Msa0715790:CDS | 50.0% | |
| ! | GGAGGTGTGTATGAAACAGC+AGG | + | chr5_1:8948119-8948138 | Msa0715790:CDS | 50.0% |
| !! | GGAGGTGTTGTTGAAGGACA+AGG | + | chr5_1:8948548-8948567 | Msa0715790:CDS | 50.0% |
| ATTGGAAGCTGCAAAAGCCG+AGG | + | chr5_1:8948604-8948623 | Msa0715790:CDS | 50.0% | |
| AGCCGAGGAAGAATTGCGAA+TGG | + | chr5_1:8948619-8948638 | Msa0715790:CDS | 50.0% | |
| GCCGAGGAAGAATTGCGAAT+GGG | + | chr5_1:8948620-8948639 | Msa0715790:CDS | 50.0% | |
| GAGGAAGAATTGCGAATGGG+AGG | + | chr5_1:8948623-8948642 | Msa0715790:CDS | 50.0% | |
| GAAGAATTGCGAATGGGAGG+AGG | + | chr5_1:8948626-8948645 | Msa0715790:CDS | 50.0% | |
| CAAGGAGGAGGGACCATTAA+TGG | + | chr5_1:8948782-8948801 | Msa0715790:CDS | 50.0% | |
| TCAGGAGCTGACAAAGGAAG+AGG | - | chr5_1:8949046-8949065 | None:intergenic | 50.0% | |
| AAAAAGCCGGCTGGAACAGT+AGG | + | chr5_1:8949889-8949908 | Msa0715790:intron | 50.0% | |
| ! | GGAGGAATGTCGCTTCATGA+TGG | - | chr5_1:8950106-8950125 | None:intergenic | 50.0% |
| TGCCTTCTGTTGGAAACAGG+AGG | - | chr5_1:8950124-8950143 | None:intergenic | 50.0% | |
| GAGTGCCTTCTGTTGGAAAC+AGG | - | chr5_1:8950127-8950146 | None:intergenic | 50.0% | |
| AGTGAGTGAGTGCCTTCTGT+TGG | - | chr5_1:8950134-8950153 | None:intergenic | 50.0% | |
| GGTCAACTCTTGTTGCGACT+TGG | - | chr5_1:8950602-8950621 | None:intergenic | 50.0% | |
| ! | CTAGGAGAGAAAGAAGGTGC+AGG | + | chr5_1:8951102-8951121 | Msa0715790:CDS | 50.0% |
| GCAGGAGGAGGTTTAACCAA+AGG | + | chr5_1:8951120-8951139 | Msa0715790:CDS | 50.0% | |
| TAACCAAAGGTGAGACCCCT+AGG | + | chr5_1:8951133-8951152 | Msa0715790:CDS | 50.0% | |
| GAAGCTTGGAGACCACAAAG+AGG | + | chr5_1:8951222-8951241 | Msa0715790:CDS | 50.0% | |
| !! | GCCCCCTCTAAAGGTACTAA+CGG | - | chr5_1:8951602-8951621 | None:intergenic | 50.0% |
| TCGAAGGTAGGGAAGACCTT+CGG | - | chr5_1:8951660-8951679 | None:intergenic | 50.0% | |
| ! | CTTGGTGTAGGCTACACCAT+TGG | + | chr5_1:8951933-8951952 | Msa0715790:intron | 50.0% |
| TGAACATGGTGAAGCTGGTC+AGG | - | chr5_1:8953797-8953816 | None:intergenic | 50.0% | |
| ! | GGTTGGTGTGTCAATCACAG+AGG | + | chr5_1:8953867-8953886 | Msa0715790:intron | 50.0% |
| !! | GATTACGTTGACTCCGCGAT+AGG | + | chr5_1:8954032-8954051 | Msa0715790:intron | 50.0% |
| TTGCAGGTGAATTGGGAGCT+AGG | - | chr5_1:8954247-8954266 | None:intergenic | 50.0% | |
| GTCACAGTGACGACCCATTT+CGG | - | chr5_1:8954766-8954785 | None:intergenic | 50.0% | |
| !! | CTTGCTGGCTTTGAACTTGG+TGG | - | chr5_1:8954806-8954825 | None:intergenic | 50.0% |
| ACAAATGAGCGACAAGGCTC+TGG | - | chr5_1:8955209-8955228 | None:intergenic | 50.0% | |
| ! | GAGCCTTGTCGCTCATTTGT+TGG | + | chr5_1:8955209-8955228 | Msa0715790:intron | 50.0% |
| GAGCCAACAAATGAGCGACA+AGG | - | chr5_1:8955215-8955234 | None:intergenic | 50.0% | |
| !!! | CAGCTCTGCCATTTTCGAGA+TGG | - | chr5_1:8955440-8955459 | None:intergenic | 50.0% |
| CATCTCGAAAATGGCAGAGC+TGG | + | chr5_1:8955438-8955457 | Msa0715790:intron | 50.0% | |
| ! | TGCTCTAATTTGCCGCATCC+AGG | + | chr5_1:8955565-8955584 | Msa0715790:intron | 50.0% |
| CTCTCCTATCACTGCCTAAC+TGG | - | chr5_1:8955740-8955759 | None:intergenic | 50.0% | |
| CAGTTAGGCAGTGATAGGAG+AGG | + | chr5_1:8955738-8955757 | Msa0715790:intron | 50.0% | |
| TCCATGGTTCTTCCAGCCAT+AGG | + | chr5_1:8955767-8955786 | Msa0715790:intron | 50.0% | |
| ACCTATGGCTGGAAGAACCA+TGG | - | chr5_1:8955771-8955790 | None:intergenic | 50.0% | |
| TCCAGCCATAGGTCAAGAAG+TGG | + | chr5_1:8955778-8955797 | Msa0715790:intron | 50.0% | |
| TCCACTTCTTGACCTATGGC+TGG | - | chr5_1:8955782-8955801 | None:intergenic | 50.0% | |
| CAACCACCATACCCCAAGTT+AGG | + | chr5_1:8956523-8956542 | Msa0715790:intron | 50.0% | |
| AACCCTAACTTGGGGTATGG+TGG | - | chr5_1:8956529-8956548 | None:intergenic | 50.0% | |
| CACCATTGCAGGGTACATGT+AGG | - | chr5_1:8957175-8957194 | None:intergenic | 50.0% | |
| CCCGTATAACTCACCATTGC+AGG | - | chr5_1:8957186-8957205 | None:intergenic | 50.0% | |
| TGAGTTATACGGGGAAGGAC+CGG | + | chr5_1:8957193-8957212 | Msa0715790:intron | 50.0% | |
| GACCGGAACCAGACTTAAAG+AGG | + | chr5_1:8957210-8957229 | Msa0715790:intron | 50.0% | |
| ATGAGCTAAGCCCAGAAGAC+GGG | - | chr5_1:8957563-8957582 | None:intergenic | 50.0% | |
| ! | CTCGCACCCCTTAATTTTGC+CGG | - | chr5_1:8957593-8957612 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr5_1:8958066-8958085 | Msa0715790:intron | 50.0% |
| TTTGGGAGTTTGGAGGGGAA+GGG | + | chr5_1:8958073-8958092 | Msa0715790:intron | 50.0% | |
| ! | TGTATTGGGGGAGGGTTTTG+GGG | - | chr5_1:8958379-8958398 | None:intergenic | 50.0% |
| TTGAGTTCCCCCAAATGAGG+GGG | + | chr5_1:8958403-8958422 | Msa0715790:intron | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr5_1:8958066-8958085 | None:intergenic | 50.0% |
| ! | GCTGTTGCTGTTGATGTTGG+TGG | - | chr5_1:8958823-8958842 | None:intergenic | 50.0% |
| !!! | GATCTTTTTTGGGGTGGTGG+TGG | - | chr5_1:8958853-8958872 | None:intergenic | 50.0% |
| GGTGGTGTTTATGGTGGTTG+TGG | - | chr5_1:8958959-8958978 | None:intergenic | 50.0% | |
| AGAGACGGTGGTGTTTATGG+TGG | - | chr5_1:8958965-8958984 | None:intergenic | 50.0% | |
| CTCAGAGACGGTGGTGTTTA+TGG | - | chr5_1:8958968-8958987 | None:intergenic | 50.0% | |
| CATAAACACCACCGTCTCTG+AGG | + | chr5_1:8958966-8958985 | Msa0715790:CDS | 50.0% | |
| GGTGGCAGGTCTGTATCAAA+GGG | - | chr5_1:8959000-8959019 | None:intergenic | 50.0% | |
| TGGTGGCAGGTCTGTATCAA+AGG | - | chr5_1:8959001-8959020 | None:intergenic | 50.0% | |
| ATGGCCATTGATCTGTGTGG+TGG | - | chr5_1:8959018-8959037 | None:intergenic | 50.0% | |
| ACCACACAGATCAATGGCCA+TGG | + | chr5_1:8959017-8959036 | Msa0715790:CDS | 50.0% | |
| TCCATGGCCATTGATCTGTG+TGG | - | chr5_1:8959021-8959040 | None:intergenic | 50.0% | |
| AGGTTTGGGTCCACTACTAC+TGG | + | chr5_1:8959117-8959136 | Msa0715790:CDS | 50.0% | |
| TGACACGTCACCAGTAGTAG+TGG | - | chr5_1:8959130-8959149 | None:intergenic | 50.0% | |
| ! | GTGACGTGTCACTCACGTTA+GGG | + | chr5_1:8959139-8959158 | Msa0715790:CDS | 50.0% |
| TATCAGGCACATTGCCAGCA+TGG | - | chr5_1:8959170-8959189 | None:intergenic | 50.0% | |
| GAATTGCGAATGGGAGGAGG+AGG | + | chr5_1:8948629-8948648 | Msa0715790:CDS | 55.0% | |
| ! | GGAGAGAAAGAAGGTGCAGG+AGG | + | chr5_1:8951105-8951124 | Msa0715790:CDS | 55.0% |
| ! | GAGAAAGAAGGTGCAGGAGG+AGG | + | chr5_1:8951108-8951127 | Msa0715790:CDS | 55.0% |
| AAGCCTAGGGGTCTCACCTT+TGG | - | chr5_1:8951139-8951158 | None:intergenic | 55.0% | |
| AGGTGAGACCCCTAGGCTTA+AGG | + | chr5_1:8951140-8951159 | Msa0715790:CDS | 55.0% | |
| CGATCAGGCAAGCCTCTTTG+TGG | - | chr5_1:8951237-8951256 | None:intergenic | 55.0% | |
| TATGACCCGTGCGTTAGCAC+GGG | - | chr5_1:8953473-8953492 | None:intergenic | 55.0% | |
| GTATGACCCGTGCGTTAGCA+CGG | - | chr5_1:8953474-8953493 | None:intergenic | 55.0% | |
| TGGTGAAGCTGGTCAGGCAT+CGG | - | chr5_1:8953791-8953810 | None:intergenic | 55.0% | |
| !! | CGTTGACTCCGCGATAGGAT+TGG | + | chr5_1:8954037-8954056 | Msa0715790:intron | 55.0% |
| GCTCCAACACAGATTGCAGC+AGG | - | chr5_1:8954387-8954406 | None:intergenic | 55.0% | |
| ! | CTTTTATGGTCGCCGACCCA+TGG | - | chr5_1:8955684-8955703 | None:intergenic | 55.0% |
| ! | TGTGGTTTGGGGATCTGGCT+TGG | + | chr5_1:8956485-8956504 | Msa0715790:intron | 55.0% |
| TTGGGGTATGGTGGTTGCCT+GGG | - | chr5_1:8956520-8956539 | None:intergenic | 55.0% | |
| GGCCTACATGTACCCTGCAA+TGG | + | chr5_1:8957170-8957189 | Msa0715790:intron | 55.0% | |
| !! | AGATGAGAGTGCCCGTCTTC+TGG | + | chr5_1:8957549-8957568 | Msa0715790:intron | 55.0% |
| !! | GATGAGAGTGCCCGTCTTCT+GGG | + | chr5_1:8957550-8957569 | Msa0715790:intron | 55.0% |
| GTTTGGGAGTTTGGAGGGGA+AGG | + | chr5_1:8958072-8958091 | Msa0715790:intron | 55.0% | |
| !!! | GGGTTTTGGGGGGTTATGGA+GGG | - | chr5_1:8958367-8958386 | None:intergenic | 55.0% |
| !!! | AGGGTTTTGGGGGGTTATGG+AGG | - | chr5_1:8958368-8958387 | None:intergenic | 55.0% |
| !!! | TATTGGGGGAGGGTTTTGGG+GGG | - | chr5_1:8958377-8958396 | None:intergenic | 55.0% |
| !! | GTATTGGGGGAGGGTTTTGG+GGG | - | chr5_1:8958378-8958397 | None:intergenic | 55.0% |
| ACATTGGGAGGAGAGGGCTT+TGG | - | chr5_1:8958458-8958477 | None:intergenic | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | - | chr5_1:8958524-8958543 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | chr5_1:8958072-8958091 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | chr5_1:8958071-8958090 | None:intergenic | 55.0% | |
| ! | AAACACCACCGTCTCTGAGG+TGG | + | chr5_1:8958969-8958988 | Msa0715790:CDS | 55.0% |
| GGCAGGTCTGTATCAAAGGG+TGG | - | chr5_1:8958997-8959016 | None:intergenic | 55.0% | |
| CCATTGATCTGTGTGGTGGC+AGG | - | chr5_1:8959014-8959033 | None:intergenic | 55.0% | |
| CCTGCCACCACACAGATCAA+TGG | + | chr5_1:8959011-8959030 | Msa0715790:CDS | 55.0% | |
| ! | GGTGACGTGTCACTCACGTT+AGG | + | chr5_1:8959138-8959157 | Msa0715790:CDS | 55.0% |
| ACGTTAGGGTTACGCCATGC+TGG | + | chr5_1:8959153-8959172 | Msa0715790:CDS | 55.0% | |
| TTGCGAATGGGAGGAGGAGG+AGG | + | chr5_1:8948632-8948651 | Msa0715790:CDS | 60.0% | |
| CATCGACCCGTGCTAACGCA+CGG | + | chr5_1:8953464-8953483 | Msa0715790:intron | 60.0% | |
| ATCGACCCGTGCTAACGCAC+GGG | + | chr5_1:8953465-8953484 | Msa0715790:intron | 60.0% | |
| !! | TTGGGGATCTGGCTTGGACC+TGG | + | chr5_1:8956491-8956510 | Msa0715790:intron | 60.0% |
| CTTGGGGTATGGTGGTTGCC+TGG | - | chr5_1:8956521-8956540 | None:intergenic | 60.0% | |
| GGAGTTTGGAGGGGAAGGGA+GGG | + | chr5_1:8958077-8958096 | Msa0715790:intron | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | + | chr5_1:8958078-8958097 | Msa0715790:intron | 60.0% | |
| !!! | GGGAGGGTTTTGGGGGGTTA+TGG | - | chr5_1:8958371-8958390 | None:intergenic | 60.0% |
| ! | TTGGGAGGAGAGGGCTTTGG+AGG | - | chr5_1:8958455-8958474 | None:intergenic | 60.0% |
| TGGAACCACCTCAGAGACGG+TGG | - | chr5_1:8958977-8958996 | None:intergenic | 60.0% | |
| GGGTGGAACCACCTCAGAGA+CGG | - | chr5_1:8958980-8958999 | None:intergenic | 60.0% | |
| CGAATGGGAGGAGGAGGAGG+AGG | + | chr5_1:8948635-8948654 | Msa0715790:CDS | 65.0% | |
| ATGGGAGGAGGAGGAGGAGG+TGG | + | chr5_1:8948638-8948657 | Msa0715790:CDS | 65.0% | |
| GGAGGAGGTGGAGGAGGAGA+TGG | + | chr5_1:8948650-8948669 | Msa0715790:CDS | 65.0% | |
| GGAGGTGGAGGAGGAGATGG+TGG | + | chr5_1:8948653-8948672 | Msa0715790:CDS | 65.0% | |
| GAGGGGGGGACCTTGACTCT+TGG | - | chr5_1:8949303-8949322 | None:intergenic | 65.0% | |
| CGTGCGTTAGCACGGGTCGA+TGG | - | chr5_1:8953466-8953485 | None:intergenic | 65.0% | |
| ! | TGGCTTGGACCTGGCTTCCC+AGG | + | chr5_1:8956500-8956519 | Msa0715790:intron | 65.0% |
| TGGTGGTTGCCTGGGAAGCC+AGG | - | chr5_1:8956512-8956531 | None:intergenic | 65.0% | |
| GGGAGTTTGGAGGGGAAGGG+AGG | + | chr5_1:8958076-8958095 | Msa0715790:intron | 65.0% | |
| TTTGGAGGGGAAGGGAGGGG+AGG | + | chr5_1:8958081-8958100 | Msa0715790:intron | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+GGG | + | chr5_1:8958082-8958101 | Msa0715790:intron | 65.0% | |
| GGAAGGGAGGGGAGGGCTTT+GGG | + | chr5_1:8958089-8958108 | Msa0715790:intron | 65.0% | |
| GAAGGGAGGGGAGGGCTTTG+GGG | + | chr5_1:8958090-8958109 | Msa0715790:intron | 65.0% | |
| ! | AAGGGAGGGGAGGGCTTTGG+GGG | + | chr5_1:8958091-8958110 | Msa0715790:intron | 65.0% |
| ! | TGGAGGGGAGGGGAGGGTTT+TGG | - | chr5_1:8958514-8958533 | None:intergenic | 65.0% |
| GGAGTTTGGAGGGGAGGGGA+GGG | - | chr5_1:8958520-8958539 | None:intergenic | 65.0% | |
| GGAGGAGGAGGAGGAGGTGG+AGG | + | chr5_1:8948641-8948660 | Msa0715790:CDS | 70.0% | |
| GGAGGAGGAGGAGGTGGAGG+AGG | + | chr5_1:8948644-8948663 | Msa0715790:CDS | 70.0% | |
| GGGAAGGGAGGGGAGGGCTT+TGG | + | chr5_1:8958088-8958107 | Msa0715790:intron | 70.0% | |
| !! | GAGGGGAGGGCTTTGGGGGT+TGG | + | chr5_1:8958095-8958114 | Msa0715790:intron | 70.0% |
| GGGAGTTTGGAGGGGAGGGG+AGG | - | chr5_1:8958521-8958540 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 8947852 | 8959327 | 8947852 | ID=Msa0715790;Name=Msa0715790 |
| chr5_1 | mRNA | 8947852 | 8959327 | 8947852 | ID=Msa0715790-mRNA-1;Parent=Msa0715790;Name=Msa0715790-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.66|0.5|1|1|1|4|118|736 |
| chr5_1 | exon | 8947852 | 8949121 | 8947852 | ID=Msa0715790-mRNA-1:exon:3653;Parent=Msa0715790-mRNA-1 |
| chr5_1 | exon | 8950968 | 8951304 | 8950968 | ID=Msa0715790-mRNA-1:exon:3654;Parent=Msa0715790-mRNA-1 |
| chr5_1 | exon | 8953125 | 8953185 | 8953125 | ID=Msa0715790-mRNA-1:exon:3655;Parent=Msa0715790-mRNA-1 |
| chr5_1 | exon | 8958667 | 8959327 | 8958667 | ID=Msa0715790-mRNA-1:exon:3656;Parent=Msa0715790-mRNA-1 |
| chr5_1 | CDS | 8947852 | 8949121 | 8947852 | ID=Msa0715790-mRNA-1:cds;Parent=Msa0715790-mRNA-1 |
| chr5_1 | CDS | 8950968 | 8951304 | 8950968 | ID=Msa0715790-mRNA-1:cds;Parent=Msa0715790-mRNA-1 |
| chr5_1 | CDS | 8953125 | 8953185 | 8953125 | ID=Msa0715790-mRNA-1:cds;Parent=Msa0715790-mRNA-1 |
| chr5_1 | CDS | 8958667 | 8959209 | 8958667 | ID=Msa0715790-mRNA-1:cds;Parent=Msa0715790-mRNA-1 |
| chr5_1 | three_prime_UTR | 8959210 | 8959327 | 8959210 | ID=Msa0715790-mRNA-1:three_prime_utr;Parent=Msa0715790-mRNA-1 |
| Gene Sequence |
| Protein sequence |