Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715930 | XP_003611877.2 | 97.533 | 527 | 11 | 1 | 1 | 527 | 1 | 525 | 0.0 | 1069 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715930 | sp|Q8W4F0|DAR1_ARATH | 66.726 | 559 | 147 | 6 | 1 | 526 | 1 | 553 | 0.0 | 716 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715930 | G7KAS2 | 97.533 | 527 | 11 | 1 | 1 | 527 | 1 | 525 | 0.0 | 1069 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0715930 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715930 | MtrunA17_Chr8g0373781 | 75.376 | 532 | 124 | 5 | 1 | 526 | 1 | 531 | 0.0 | 774 |
| Msa0715930 | MtrunA17_Chr5g0403261 | 89.071 | 366 | 9 | 1 | 1 | 335 | 1 | 366 | 0.0 | 672 |
| Msa0715930 | MtrunA17_Chr1g0154501 | 58.365 | 526 | 161 | 6 | 1 | 526 | 1 | 468 | 0.0 | 610 |
| Msa0715930 | MtrunA17_Chr5g0403301 | 85.246 | 305 | 23 | 2 | 223 | 527 | 25 | 307 | 7.59e-178 | 502 |
| Msa0715930 | MtrunA17_Chr5g0436051 | 50.758 | 528 | 202 | 6 | 1 | 526 | 144 | 615 | 7.95e-178 | 514 |
| Msa0715930 | MtrunA17_Chr3g0112601 | 56.733 | 453 | 165 | 6 | 101 | 526 | 64 | 512 | 3.24e-169 | 488 |
| Msa0715930 | MtrunA17_Chr5g0403271 | 97.436 | 156 | 2 | 1 | 372 | 527 | 1 | 154 | 7.61e-105 | 310 |
| Msa0715930 | MtrunA17_Chr5g0403291 | 76.404 | 89 | 20 | 1 | 156 | 244 | 382 | 469 | 4.75e-42 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715930 | AT4G36860.1 | 66.726 | 559 | 147 | 6 | 1 | 526 | 1 | 553 | 0.0 | 716 |
| Msa0715930 | AT4G36860.3 | 64.433 | 582 | 146 | 7 | 1 | 526 | 1 | 577 | 0.0 | 709 |
| Msa0715930 | AT1G19270.1 | 52.226 | 584 | 168 | 9 | 1 | 526 | 1 | 531 | 0.0 | 584 |
| Msa0715930 | AT1G19270.2 | 52.226 | 584 | 168 | 9 | 1 | 526 | 1 | 531 | 0.0 | 584 |
| Msa0715930 | AT4G36860.2 | 64.588 | 449 | 125 | 5 | 1 | 416 | 1 | 448 | 0.0 | 570 |
| Msa0715930 | AT2G39830.3 | 57.718 | 447 | 164 | 5 | 102 | 526 | 75 | 518 | 0.0 | 518 |
| Msa0715930 | AT2G39830.1 | 56.484 | 455 | 172 | 6 | 94 | 526 | 77 | 527 | 5.89e-180 | 516 |
| Msa0715930 | AT2G39830.2 | 56.114 | 458 | 172 | 7 | 94 | 526 | 77 | 530 | 9.45e-178 | 511 |
| Msa0715930 | AT5G66620.3 | 46.875 | 480 | 228 | 9 | 47 | 519 | 172 | 631 | 1.44e-135 | 407 |
| Msa0715930 | AT5G66620.4 | 46.875 | 480 | 228 | 9 | 47 | 519 | 172 | 631 | 1.44e-135 | 407 |
| Msa0715930 | AT5G66620.1 | 46.875 | 480 | 228 | 9 | 47 | 519 | 181 | 640 | 1.62e-135 | 407 |
| Msa0715930 | AT2G39830.4 | 53.315 | 362 | 144 | 6 | 94 | 432 | 77 | 436 | 4.40e-135 | 399 |
| Msa0715930 | AT5G66610.1 | 45.400 | 500 | 229 | 10 | 40 | 520 | 77 | 551 | 7.69e-130 | 390 |
| Msa0715930 | AT5G66610.3 | 46.389 | 457 | 203 | 8 | 66 | 520 | 8 | 424 | 2.39e-127 | 379 |
| Msa0715930 | AT5G66610.2 | 43.071 | 534 | 223 | 11 | 45 | 520 | 68 | 578 | 5.12e-124 | 375 |
| Msa0715930 | AT5G66630.1 | 48.800 | 375 | 175 | 7 | 148 | 519 | 338 | 698 | 2.25e-112 | 349 |
| Msa0715930 | AT5G66640.5 | 43.871 | 465 | 227 | 14 | 71 | 519 | 24 | 470 | 2.78e-108 | 332 |
| Msa0715930 | AT5G66640.4 | 43.656 | 465 | 227 | 14 | 71 | 519 | 24 | 469 | 1.22e-107 | 330 |
| Msa0715930 | AT5G66640.1 | 44.150 | 453 | 220 | 13 | 81 | 519 | 5 | 438 | 1.22e-107 | 329 |
| Msa0715930 | AT5G66640.7 | 44.150 | 453 | 220 | 13 | 81 | 519 | 5 | 438 | 1.22e-107 | 329 |
| Msa0715930 | AT5G17890.1 | 51.344 | 372 | 171 | 5 | 153 | 519 | 1235 | 1601 | 2.88e-105 | 346 |
| Msa0715930 | AT5G66640.3 | 50.464 | 323 | 151 | 6 | 205 | 519 | 10 | 331 | 2.54e-101 | 309 |
| Msa0715930 | AT5G66640.6 | 40.430 | 465 | 239 | 15 | 71 | 519 | 24 | 466 | 8.81e-92 | 289 |
| Msa0715930 | AT5G66640.2 | 40.215 | 465 | 239 | 15 | 71 | 519 | 24 | 465 | 3.30e-91 | 287 |
| Msa0715930 | AT5G66620.2 | 41.691 | 343 | 173 | 9 | 47 | 382 | 172 | 494 | 7.08e-78 | 253 |
Find 168 sgRNAs with CRISPR-Local
Find 445 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATTCCTTCTTCAATTTC+TGG | 0.060868 | 5_1:-9189850 | None:intergenic |
| TAAAGATAAATTTCCTATTT+TGG | 0.092399 | 5_1:-9190427 | None:intergenic |
| AGTATAGAGCTCATCCTTTC+TGG | 0.166643 | 5_1:+9188784 | Msa0715930:CDS |
| AACATGGTGATGATAGAATT+TGG | 0.189733 | 5_1:+9185955 | Msa0715930:CDS |
| GGCTCTAATCATAGAATTTC+AGG | 0.190682 | 5_1:+9185915 | Msa0715930:CDS |
| TCGAAGAATTTCTTCAATTC+AGG | 0.202356 | 5_1:-9185016 | None:intergenic |
| ATATTACATAATCTAGTAAA+AGG | 0.208888 | 5_1:-9190587 | None:intergenic |
| TCTCCCTGTAGCAGGATTTA+TGG | 0.233835 | 5_1:-9187773 | None:intergenic |
| CATGCATGGCTCAGGCTTAA+AGG | 0.237169 | 5_1:+9189719 | Msa0715930:CDS |
| GTCTTCCTCAAGTTGATCTT+TGG | 0.266836 | 5_1:-9186645 | None:intergenic |
| GCAGCAAGTTCCTATGCTTT+TGG | 0.277916 | 5_1:+9189133 | Msa0715930:CDS |
| TATAGAATGTGGTGAGAAAA+TGG | 0.280117 | 5_1:-9184959 | None:intergenic |
| CATCGACGGGTCAGTCTATA+AGG | 0.282747 | 5_1:-9189537 | None:intergenic |
| GTGTCTAGACTCAGCAATTA+TGG | 0.285275 | 5_1:+9189040 | Msa0715930:CDS |
| GTCCTCTAGTTTCAGGTAAA+TGG | 0.286014 | 5_1:-9189321 | None:intergenic |
| CGGTGTCCTGCCCCTATACT+TGG | 0.286586 | 5_1:-9189492 | None:intergenic |
| AAGAAATTCTTCGAACTAAC+AGG | 0.290166 | 5_1:+9185025 | Msa0715930:five_prime_UTR |
| TACCAGGCGGTACTTAAGTA+TGG | 0.294982 | 5_1:+9190096 | Msa0715930:CDS |
| GGTGAGACATTTGCAGTTAT+GGG | 0.301080 | 5_1:-9190555 | None:intergenic |
| GGGTGAGACATTTGCAGTTA+TGG | 0.314255 | 5_1:-9190556 | None:intergenic |
| CAAATTCATTCATATTTCAT+TGG | 0.316172 | 5_1:+9184923 | Msa0715930:five_prime_UTR |
| GAGAGGATGAAGGGGCTAGA+TGG | 0.342850 | 5_1:-9190239 | None:intergenic |
| ACCTCTTTCCACCAGGATTC+AGG | 0.345128 | 5_1:+9186756 | Msa0715930:CDS |
| TTAGAATCAGAGCTCTATTC+TGG | 0.345608 | 5_1:+9189895 | Msa0715930:CDS |
| TCAGAGCTCTATTCTGGATC+TGG | 0.372505 | 5_1:+9189901 | Msa0715930:CDS |
| AAGCAGAGTCCTCTAGTTTC+AGG | 0.382892 | 5_1:-9189328 | None:intergenic |
| TAAGTTGCATGGGAGGGGTC+TGG | 0.385209 | 5_1:+9187499 | Msa0715930:CDS |
| GGTTGATAGTGTTGGTCTCT+TGG | 0.401770 | 5_1:+9190294 | Msa0715930:three_prime_UTR |
| AAATTCATTCATATTTCATT+GGG | 0.410265 | 5_1:+9184924 | Msa0715930:five_prime_UTR |
| TCAATTTCTGGCCTCAAGTT+GGG | 0.412121 | 5_1:-9189838 | None:intergenic |
| TTCTTGCAAACATCACATCT+TGG | 0.412310 | 5_1:-9187804 | None:intergenic |
| TTCAATTTCTGGCCTCAAGT+TGG | 0.417922 | 5_1:-9189839 | None:intergenic |
| ATGGAAAAGTTCCGGTCAAA+TGG | 0.421969 | 5_1:-9190143 | None:intergenic |
| ACATGGTGATGATAGAATTT+GGG | 0.426199 | 5_1:+9185956 | Msa0715930:CDS |
| TGCTGTCGAGCTCATGTGTT+GGG | 0.431285 | 5_1:-9188821 | None:intergenic |
| TTTGTCAATTATTTGTATGA+TGG | 0.440224 | 5_1:-9190373 | None:intergenic |
| CTATCAACACTCTTAACAAC+TGG | 0.445569 | 5_1:+9190778 | Msa0715930:three_prime_UTR |
| TCTTGCAAACATCACATCTT+GGG | 0.448902 | 5_1:-9187803 | None:intergenic |
| GTGATGCTTCTCCCTGTAGC+AGG | 0.451634 | 5_1:-9187781 | None:intergenic |
| ACATTTGCAGTTATGGGTTG+AGG | 0.453682 | 5_1:-9190549 | None:intergenic |
| AGAGGATGAAGGGGCTAGAT+GGG | 0.455057 | 5_1:-9190238 | None:intergenic |
| TGAACATACTCTAGAACAAA+AGG | 0.455727 | 5_1:-9190462 | None:intergenic |
| TGAAGGTTTAAATATGAAAG+TGG | 0.458252 | 5_1:+9189109 | Msa0715930:CDS |
| CTAACCTCATAATCAGTGAT+TGG | 0.460726 | 5_1:-9187558 | None:intergenic |
| CGGTCAAATGGATATGATCA+AGG | 0.464591 | 5_1:-9190131 | None:intergenic |
| GGCTGTCACTTCGCATCGAC+GGG | 0.470821 | 5_1:-9189550 | None:intergenic |
| TCTGCCAATCACTGATTATG+AGG | 0.478761 | 5_1:+9187554 | Msa0715930:CDS |
| AATCTAGTAAAAGGGTAGGT+GGG | 0.479204 | 5_1:-9190578 | None:intergenic |
| TATGTTTATAGATTGTTGAC+AGG | 0.479289 | 5_1:+9189671 | Msa0715930:intron |
| TTTCTCTGCAGAATCTGTGC+TGG | 0.480650 | 5_1:+9187444 | Msa0715930:intron |
| TGGTTTACAAAGTTTCTCAA+TGG | 0.483060 | 5_1:+9185894 | Msa0715930:CDS |
| GCAGATGGCAAGCATGGCAT+TGG | 0.483972 | 5_1:-9187536 | None:intergenic |
| GTGAGGTATCTGACTCAATC+TGG | 0.485020 | 5_1:-9190044 | None:intergenic |
| GCTGGATGCAATGCTGAGAT+TGG | 0.485337 | 5_1:+9187462 | Msa0715930:CDS |
| TTGTTGTAGCTGCGAAAGAA+TGG | 0.486878 | 5_1:+9188851 | Msa0715930:CDS |
| GTCTTCTGCATCATCGAAGA+AGG | 0.493744 | 5_1:+9189975 | Msa0715930:CDS |
| AACTTCCACTTCTTTCATGT+TGG | 0.496086 | 5_1:-9190817 | None:intergenic |
| GTATTTCATGGTAGAGAGGT+TGG | 0.496331 | 5_1:-9189076 | None:intergenic |
| TCAGATACCTCACCAGCCTA+TGG | 0.497390 | 5_1:+9190054 | Msa0715930:CDS |
| ATGAGGCCAGCTGAATTAGC+CGG | 0.498369 | 5_1:-9188759 | None:intergenic |
| AGATAATGCATGCATGGCTC+AGG | 0.501774 | 5_1:+9189711 | Msa0715930:CDS |
| TATGAACCAATGCCTCATCT+TGG | 0.505007 | 5_1:+9190203 | Msa0715930:three_prime_UTR |
| ATCTAGTAAAAGGGTAGGTG+GGG | 0.505442 | 5_1:-9190577 | None:intergenic |
| CAGAGCTCTATTCTGGATCT+GGG | 0.507459 | 5_1:+9189902 | Msa0715930:CDS |
| TATTTGATTTGAGAGGATGA+AGG | 0.508367 | 5_1:-9190249 | None:intergenic |
| TCTCCCCACCTCTTTCCACC+AGG | 0.509167 | 5_1:+9186749 | Msa0715930:CDS |
| CTTGATCATATCCATTTGAC+CGG | 0.509477 | 5_1:+9190132 | Msa0715930:CDS |
| CTGAAAGGGAAGAAAGTTGT+TGG | 0.513320 | 5_1:+9186190 | Msa0715930:CDS |
| ATATATAATTACCTGAATCC+TGG | 0.513713 | 5_1:-9186767 | None:intergenic |
| TGGATTCAGATCGGGTTACC+AGG | 0.515296 | 5_1:+9190080 | Msa0715930:CDS |
| ATTCAATTAAGTTTGAGCAC+TGG | 0.516076 | 5_1:+9186686 | Msa0715930:CDS |
| ATTTGATTTGAGAGGATGAA+GGG | 0.516509 | 5_1:-9190248 | None:intergenic |
| CTTACCATAAATCCTGCTAC+AGG | 0.517147 | 5_1:+9187769 | Msa0715930:CDS |
| CAGATCCCGGCTAATTCAGC+TGG | 0.521586 | 5_1:+9188753 | Msa0715930:intron |
| CTGTAGCAGGATTTATGGTA+AGG | 0.522745 | 5_1:-9187768 | None:intergenic |
| GGTGGAAAGAGGTGGGGAGA+AGG | 0.524431 | 5_1:-9186746 | None:intergenic |
| GCACTAAATGAGGCCATTGA+GGG | 0.528915 | 5_1:+9189167 | Msa0715930:CDS |
| TATGGAGATGGATTCAGATC+GGG | 0.531474 | 5_1:+9190072 | Msa0715930:CDS |
| ACCTCACCAGCCTATGGAGA+TGG | 0.534287 | 5_1:+9190060 | Msa0715930:CDS |
| CCTCAAGTTGATCTTTGGCA+CGG | 0.534386 | 5_1:-9186640 | None:intergenic |
| CTGAATCCATCTCCATAGGC+TGG | 0.535577 | 5_1:-9190066 | None:intergenic |
| ACCTGAATCCTGGTGGAAAG+AGG | 0.537281 | 5_1:-9186757 | None:intergenic |
| CGATCTGAATCCATCTCCAT+AGG | 0.537412 | 5_1:-9190070 | None:intergenic |
| TATTACATAATCTAGTAAAA+GGG | 0.537978 | 5_1:-9190586 | None:intergenic |
| AGATTATGTAATATTAAAAG+AGG | 0.538644 | 5_1:+9190596 | Msa0715930:three_prime_UTR |
| TGGCTGTCACTTCGCATCGA+CGG | 0.539258 | 5_1:-9189551 | None:intergenic |
| CTCATGAGATAATGCATGCA+TGG | 0.539682 | 5_1:+9189705 | Msa0715930:CDS |
| CCTTCTAGCTAAAATTCAGC+AGG | 0.540630 | 5_1:+9186604 | Msa0715930:CDS |
| AGCACTAAATGAGGCCATTG+AGG | 0.541852 | 5_1:+9189166 | Msa0715930:CDS |
| CAGTTGTCAGATTAATCTGA+TGG | 0.542198 | 5_1:+9190273 | Msa0715930:three_prime_UTR |
| ACCAATGCCTCATCTTGGTA+TGG | 0.549200 | 5_1:+9190208 | Msa0715930:three_prime_UTR |
| TATCAGAGGAGGATCTGAAA+GGG | 0.551935 | 5_1:+9186176 | Msa0715930:CDS |
| TAATCTAGTAAAAGGGTAGG+TGG | 0.554357 | 5_1:-9190579 | None:intergenic |
| GAATCCTGGTGGAAAGAGGT+GGG | 0.554764 | 5_1:-9186753 | None:intergenic |
| CATGCATTATCTCATGAGCT+AGG | 0.555420 | 5_1:-9189700 | None:intergenic |
| CTATCAGAGGAGGATCTGAA+AGG | 0.555665 | 5_1:+9186175 | Msa0715930:CDS |
| TGTTCAACAAAACTTAAACT+CGG | 0.555958 | 5_1:+9190497 | Msa0715930:three_prime_UTR |
| AGAAAACCAAGTATAGGGGC+AGG | 0.561310 | 5_1:+9189486 | Msa0715930:CDS |
| TGAGGCCAGCTGAATTAGCC+GGG | 0.562601 | 5_1:-9188758 | None:intergenic |
| TTGAGGCCAGAAATTGAAGA+AGG | 0.563599 | 5_1:+9189844 | Msa0715930:CDS |
| TGATTGGCAGATGGCAAGCA+TGG | 0.564914 | 5_1:-9187542 | None:intergenic |
| GGGCAATACAATGGCAAACA+TGG | 0.564946 | 5_1:+9185939 | Msa0715930:CDS |
| TGTCTCCAACATGAAAGAAG+TGG | 0.565155 | 5_1:+9190812 | Msa0715930:three_prime_UTR |
| CTGAGTGCAGGATGATTTGA+CGG | 0.565766 | 5_1:+9186111 | Msa0715930:intron |
| TCCATACCAAGATGAGGCAT+TGG | 0.565975 | 5_1:-9190209 | None:intergenic |
| ACGGGTCAGTCTATAAGGCT+TGG | 0.569106 | 5_1:-9189532 | None:intergenic |
| TTTAAGAAAACCAAGTATAG+GGG | 0.569581 | 5_1:+9189482 | Msa0715930:CDS |
| GTAAGGACGGTTGCTAGACA+TGG | 0.570040 | 5_1:-9187751 | None:intergenic |
| TGAATCCTGGTGGAAAGAGG+TGG | 0.571390 | 5_1:-9186754 | None:intergenic |
| GCCCATACTTAAGTACCGCC+TGG | 0.571618 | 5_1:-9190098 | None:intergenic |
| AGGAAGACGAGCAACTTGCA+AGG | 0.572451 | 5_1:+9186660 | Msa0715930:CDS |
| TCTAGTATTTCATGGTAGAG+AGG | 0.573281 | 5_1:-9189080 | None:intergenic |
| CTATGGAGATGGATTCAGAT+CGG | 0.581389 | 5_1:+9190071 | Msa0715930:CDS |
| TGCAATGCTGAGATTGGCCA+TGG | 0.581581 | 5_1:+9187468 | Msa0715930:CDS |
| TCTAGTAAAAGGGTAGGTGG+GGG | 0.584139 | 5_1:-9190576 | None:intergenic |
| TGTCTTTCCACCAAAAGCAT+AGG | 0.584605 | 5_1:-9189143 | None:intergenic |
| ACCAGGCGGTACTTAAGTAT+GGG | 0.585146 | 5_1:+9190097 | Msa0715930:CDS |
| TTATAGGTTATCCCAACTTG+AGG | 0.585861 | 5_1:+9189827 | Msa0715930:intron |
| AATCTGATGGTTGATAGTGT+TGG | 0.587415 | 5_1:+9190286 | Msa0715930:three_prime_UTR |
| TGGTTATCATGTCTGTGACT+CGG | 0.588138 | 5_1:-9189512 | None:intergenic |
| TTTGATTTGAGAGGATGAAG+GGG | 0.590733 | 5_1:-9190247 | None:intergenic |
| AGGAATCCCTACGGTGGTGA+CGG | 0.592884 | 5_1:-9189365 | None:intergenic |
| GTGCTGTCGAGCTCATGTGT+TGG | 0.594423 | 5_1:-9188822 | None:intergenic |
| AGAAGGAATCTGTCAAGTGT+TGG | 0.595703 | 5_1:+9189861 | Msa0715930:CDS |
| GGAAAGACAAGCACTAAATG+AGG | 0.596661 | 5_1:+9189157 | Msa0715930:CDS |
| AAGGCCATACAAAACAAGAA+TGG | 0.597233 | 5_1:-9189571 | None:intergenic |
| TTCTTCGATGATGCAGAAGA+CGG | 0.597877 | 5_1:-9189973 | None:intergenic |
| GGAAGACGAGCAACTTGCAA+GGG | 0.598064 | 5_1:+9186661 | Msa0715930:CDS |
| AGCAGGATTTATGGTAAGGA+CGG | 0.599912 | 5_1:-9187764 | None:intergenic |
| TCCATCTCCATAGGCTGGTG+AGG | 0.600925 | 5_1:-9190061 | None:intergenic |
| GATGAGGAAGATGAGAATGT+TGG | 0.603051 | 5_1:+9186557 | Msa0715930:CDS |
| ACAACTTTGTAAAATTGATG+AGG | 0.604993 | 5_1:+9186541 | Msa0715930:CDS |
| CATAATCAGTGATTGGCAGA+TGG | 0.606004 | 5_1:-9187551 | None:intergenic |
| GTCAAGTGTTGGCTCATATG+TGG | 0.608811 | 5_1:+9189872 | Msa0715930:CDS |
| GGTCAAATGGATATGATCAA+GGG | 0.611026 | 5_1:-9190130 | None:intergenic |
| TGCACTCTCTCTATCAGAGG+AGG | 0.611907 | 5_1:+9186165 | Msa0715930:CDS |
| GGTGTGTGAGAACATCTTTG+AGG | 0.615018 | 5_1:+9190617 | Msa0715930:three_prime_UTR |
| CAACTGATATTTGATTTGAG+AGG | 0.615427 | 5_1:-9190256 | None:intergenic |
| ATGACTTGATTAGATGAGCT+AGG | 0.617250 | 5_1:-9190525 | None:intergenic |
| ACTGGTTCTCCTCCTCGACA+TGG | 0.617399 | 5_1:+9186704 | Msa0715930:CDS |
| TATAATTACCTGAATCCTGG+TGG | 0.627643 | 5_1:-9186764 | None:intergenic |
| AATCCTGGTGGAAAGAGGTG+GGG | 0.630175 | 5_1:-9186752 | None:intergenic |
| ACATAATCTAGTAAAAGGGT+AGG | 0.633780 | 5_1:-9190582 | None:intergenic |
| AGAGAATCTTTGCCATGTCG+AGG | 0.635073 | 5_1:-9186716 | None:intergenic |
| GATGAGCTCTATACTCAATG+AGG | 0.636611 | 5_1:-9188776 | None:intergenic |
| TCAATTCAGGAACACCCAGT+AGG | 0.636646 | 5_1:-9185003 | None:intergenic |
| ATTTCAGGAGGGCAATACAA+TGG | 0.636955 | 5_1:+9185930 | Msa0715930:CDS |
| TCGTCAAGATGAAGTCATAG+AGG | 0.640438 | 5_1:-9184867 | None:intergenic |
| TTACCATAAATCCTGCTACA+GGG | 0.641135 | 5_1:+9187770 | Msa0715930:CDS |
| GGATAATCATCATAGTTCAG+TGG | 0.641892 | 5_1:+9185977 | Msa0715930:CDS |
| GGTGAGAAAATGGAATCTAG+TGG | 0.644232 | 5_1:-9184949 | None:intergenic |
| GCATGGCATTGGAAGCATTG+TGG | 0.647853 | 5_1:-9187525 | None:intergenic |
| GATGAAGACGAAGACGAAGG+CGG | 0.650656 | 5_1:-9189937 | None:intergenic |
| GGATCTGTACAAGCTAGTGA+AGG | 0.650743 | 5_1:+9190638 | Msa0715930:three_prime_UTR |
| CACCATTTACCTGAAACTAG+AGG | 0.653687 | 5_1:+9189319 | Msa0715930:CDS |
| TCTTCTGCATCATCGAAGAA+GGG | 0.657416 | 5_1:+9189976 | Msa0715930:CDS |
| AATTGCACTCTCTCTATCAG+AGG | 0.658444 | 5_1:+9186162 | Msa0715930:CDS |
| TCTAATCATAGAATTTCAGG+AGG | 0.660809 | 5_1:+9185918 | Msa0715930:CDS |
| TTCGATGATGCAGAAGACGG+CGG | 0.671463 | 5_1:-9189970 | None:intergenic |
| GAATCTTTGCCATGTCGAGG+AGG | 0.671664 | 5_1:-9186713 | None:intergenic |
| TTGTAGCTGCGAAAGAATGG+AGG | 0.672189 | 5_1:+9188854 | Msa0715930:CDS |
| GATGATGAAGACGAAGACGA+AGG | 0.677210 | 5_1:-9189940 | None:intergenic |
| TAACACTCCATACCAAGATG+AGG | 0.677886 | 5_1:-9190215 | None:intergenic |
| GTACAGTGATTGATATAGTG+CGG | 0.680093 | 5_1:-9184833 | None:intergenic |
| CCGTGCCAAAGATCAACTTG+AGG | 0.706058 | 5_1:+9186640 | Msa0715930:CDS |
| CTAATCATAGAATTTCAGGA+GGG | 0.718623 | 5_1:+9185919 | Msa0715930:CDS |
| CTTTCGCAGCTACAACAACG+AGG | 0.721804 | 5_1:-9188846 | None:intergenic |
| ATTCAGATCGGGTTACCAGG+CGG | 0.751020 | 5_1:+9190083 | Msa0715930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTGAAAGATATATTT+GGG | - | chr5_1:9185548-9185567 | None:intergenic | 10.0% |
| !!! | AATTTTTTGAAAGATATATT+TGG | - | chr5_1:9185549-9185568 | None:intergenic | 10.0% |
| !!! | TTTGAATCATTTTATATAAT+CGG | + | chr5_1:9187061-9187080 | Msa0715930:intron | 10.0% |
| !!! | TTTTTTTTTATACTAACATA+TGG | + | chr5_1:9187282-9187301 | Msa0715930:intron | 10.0% |
| !!! | AAGTAAATAATTCAATTTTT+AGG | - | chr5_1:9187335-9187354 | None:intergenic | 10.0% |
| !! | ATATTTACTTAATAAGTTAT+AGG | - | chr5_1:9188456-9188475 | None:intergenic | 10.0% |
| !!! | GATTAATTTGTATAGAAAAA+TGG | - | chr5_1:9184904-9184923 | None:intergenic | 15.0% |
| !! | AAATTCATTCATATTTCATT+GGG | + | chr5_1:9184924-9184943 | Msa0715930:five_prime_UTR | 15.0% |
| !!! | AAAAAACATTCTTTTTTGTT+TGG | + | chr5_1:9185072-9185091 | Msa0715930:intron | 15.0% |
| !!! | AAAAACATTCTTTTTTGTTT+GGG | + | chr5_1:9185073-9185092 | Msa0715930:intron | 15.0% |
| !!! | TATACATCTTTATTTTACTA+CGG | + | chr5_1:9185597-9185616 | Msa0715930:intron | 15.0% |
| !! | TTAATGTGTATAAGAAATAT+GGG | + | chr5_1:9186286-9186305 | Msa0715930:intron | 15.0% |
| !!! | CAATTTTCATAAAAAGTATT+TGG | - | chr5_1:9186822-9186841 | None:intergenic | 15.0% |
| !!! | TATTAAGTATTTCTGAATTA+TGG | + | chr5_1:9186936-9186955 | Msa0715930:intron | 15.0% |
| !!! | TTGAATCATTTTATATAATC+GGG | + | chr5_1:9187062-9187081 | Msa0715930:intron | 15.0% |
| !!! | TACTTAGATTTTATTAACTA+AGG | - | chr5_1:9187190-9187209 | None:intergenic | 15.0% |
| !! | TTATGAAGATTATATCTATA+TGG | - | chr5_1:9187241-9187260 | None:intergenic | 15.0% |
| !! | ACAATTATTAGATTTCAAAT+AGG | - | chr5_1:9188324-9188343 | None:intergenic | 15.0% |
| !! | CATAAATTAGAATAGATAAT+AGG | - | chr5_1:9188947-9188966 | None:intergenic | 15.0% |
| !! | CTATTATCTATTCTAATTTA+TGG | + | chr5_1:9188945-9188964 | Msa0715930:intron | 15.0% |
| !! | AAGATTTGTGAATTATATAA+CGG | + | chr5_1:9189432-9189451 | Msa0715930:intron | 15.0% |
| !!! | TAAAGATAAATTTCCTATTT+TGG | - | chr5_1:9190430-9190449 | None:intergenic | 15.0% |
| !! | TATTACATAATCTAGTAAAA+GGG | - | chr5_1:9190589-9190608 | None:intergenic | 15.0% |
| !! | ATATTACATAATCTAGTAAA+AGG | - | chr5_1:9190590-9190609 | None:intergenic | 15.0% |
| !! | AGATTATGTAATATTAAAAG+AGG | + | chr5_1:9190596-9190615 | Msa0715930:three_prime_UTR | 15.0% |
| !! | CAAATTCATTCATATTTCAT+TGG | + | chr5_1:9184923-9184942 | Msa0715930:five_prime_UTR | 20.0% |
| !! | GAAGAAAAAAATATAGAATG+TGG | - | chr5_1:9184973-9184992 | None:intergenic | 20.0% |
| !!! | TATATTATAGTTGTTGATTC+TGG | + | chr5_1:9185170-9185189 | Msa0715930:intron | 20.0% |
| !!! | AGGCTATAATTATTTTTTTG+AGG | - | chr5_1:9185331-9185350 | None:intergenic | 20.0% |
| !! | TATAACAAATTGCATCAAAA+GGG | - | chr5_1:9185487-9185506 | None:intergenic | 20.0% |
| !! | ATATAACAAATTGCATCAAA+AGG | - | chr5_1:9185488-9185507 | None:intergenic | 20.0% |
| !!! | ATACATCTTTATTTTACTAC+GGG | + | chr5_1:9185598-9185617 | Msa0715930:intron | 20.0% |
| !!! | GGAATAATTTTGTGTAATAT+GGG | + | chr5_1:9185870-9185889 | Msa0715930:exon | 20.0% |
| !! | TTTCAATTTCTTACTAATGA+AGG | - | chr5_1:9186016-9186035 | None:intergenic | 20.0% |
| !! | ATAGTTTGAATATGTAATTG+TGG | + | chr5_1:9186084-9186103 | Msa0715930:intron | 20.0% |
| !! | GTTAATGTGTATAAGAAATA+TGG | + | chr5_1:9186285-9186304 | Msa0715930:intron | 20.0% |
| !! | TAATGTGTATAAGAAATATG+GGG | + | chr5_1:9186287-9186306 | Msa0715930:intron | 20.0% |
| !!! | TTTAACTTATACTTTGGTAT+GGG | - | chr5_1:9186461-9186480 | None:intergenic | 20.0% |
| !! | AAAAAAATCGTGAGATATAA+CGG | - | chr5_1:9187269-9187288 | None:intergenic | 20.0% |
| !! | GTTGTTCATTTGTTTAAATA+TGG | - | chr5_1:9187406-9187425 | None:intergenic | 20.0% |
| !! | CAATACGATTATGAATAATA+CGG | + | chr5_1:9187702-9187721 | Msa0715930:intron | 20.0% |
| !! | ATTTCTTTCATTTCAATAAC+TGG | + | chr5_1:9188227-9188246 | Msa0715930:intron | 20.0% |
| !! | TTAAAACATTAATAGCAACT+GGG | + | chr5_1:9188610-9188629 | Msa0715930:intron | 20.0% |
| !!! | AAAAGATATTTTGAATCCTT+TGG | - | chr5_1:9188990-9189009 | None:intergenic | 20.0% |
| !!! | AAATATCTTTTTCTTGATGA+TGG | + | chr5_1:9188999-9189018 | Msa0715930:CDS | 20.0% |
| !! | CAAAAAATTCTAGTATTTCA+TGG | - | chr5_1:9189091-9189110 | None:intergenic | 20.0% |
| !!! | GAAATACTAGAATTTTTTGA+AGG | + | chr5_1:9189092-9189111 | Msa0715930:CDS | 20.0% |
| !!! | ATTTTAAGAAAACCAAGTAT+AGG | + | chr5_1:9189480-9189499 | Msa0715930:CDS | 20.0% |
| !!! | TTTTAAGAAAACCAAGTATA+GGG | + | chr5_1:9189481-9189500 | Msa0715930:CDS | 20.0% |
| !! | TTTGTCAATTATTTGTATGA+TGG | - | chr5_1:9190376-9190395 | None:intergenic | 20.0% |
| !!! | CTTTTTAAGAATTCCAAAAT+AGG | + | chr5_1:9190414-9190433 | Msa0715930:three_prime_UTR | 20.0% |
| !!! | TTTAAGTTTTGTTGAACAAA+GGG | - | chr5_1:9190495-9190514 | None:intergenic | 20.0% |
| !! | TTGAGAATTATGAAGAAAAA+TGG | + | chr5_1:9190682-9190701 | Msa0715930:three_prime_UTR | 20.0% |
| ! | TCTTCTTAAAAAAATCCTAC+TGG | + | chr5_1:9184988-9185007 | Msa0715930:five_prime_UTR | 25.0% |
| ! | CTTCTTAAAAAAATCCTACT+GGG | + | chr5_1:9184989-9185008 | Msa0715930:five_prime_UTR | 25.0% |
| !!! | TAGAAAGCTTGGTTTTATAT+GGG | - | chr5_1:9185515-9185534 | None:intergenic | 25.0% |
| !!! | ATAGAAAGCTTGGTTTTATA+TGG | - | chr5_1:9185516-9185535 | None:intergenic | 25.0% |
| ! | TTTGAAAGATATATTTGGGA+GGG | - | chr5_1:9185544-9185563 | None:intergenic | 25.0% |
| !!! | TTTTGAAAGATATATTTGGG+AGG | - | chr5_1:9185545-9185564 | None:intergenic | 25.0% |
| !! | GGGAATAATTTTGTGTAATA+TGG | + | chr5_1:9185869-9185888 | Msa0715930:exon | 25.0% |
| !! | TAATTTTGTGTAATATGGGT+TGG | + | chr5_1:9185874-9185893 | Msa0715930:exon | 25.0% |
| !!! | TACAATTTTTCTGAGACTTA+AGG | + | chr5_1:9186059-9186078 | Msa0715930:intron | 25.0% |
| !! | TAAGAAATATGGGGATATTT+TGG | + | chr5_1:9186296-9186315 | Msa0715930:intron | 25.0% |
| !! | CTTTAACTTATACTTTGGTA+TGG | - | chr5_1:9186462-9186481 | None:intergenic | 25.0% |
| ! | CATACCAAAGTATAAGTTAA+AGG | + | chr5_1:9186460-9186479 | Msa0715930:intron | 25.0% |
| ! | ATTATGAGATAAAGAACATG+AGG | - | chr5_1:9186486-9186505 | None:intergenic | 25.0% |
| ! | ACAACTTTGTAAAATTGATG+AGG | + | chr5_1:9186541-9186560 | Msa0715930:CDS | 25.0% |
| ! | ATATATAATTACCTGAATCC+TGG | - | chr5_1:9186770-9186789 | None:intergenic | 25.0% |
| !!! | TTCTGTTTGGCAATATTTTT+TGG | - | chr5_1:9186897-9186916 | None:intergenic | 25.0% |
| ! | GTTTCATAACATATTCTGTT+TGG | - | chr5_1:9186910-9186929 | None:intergenic | 25.0% |
| ! | TCAGAAATACTTAATAACTG+AGG | - | chr5_1:9186932-9186951 | None:intergenic | 25.0% |
| !! | AAAAGTGTAAAGGAAAACAA+GGG | - | chr5_1:9187016-9187035 | None:intergenic | 25.0% |
| !! | AAAAAGTGTAAAGGAAAACA+AGG | - | chr5_1:9187017-9187036 | None:intergenic | 25.0% |
| ! | GTTTATCATGTTTCATTTCA+TGG | - | chr5_1:9187133-9187152 | None:intergenic | 25.0% |
| !! | ATCCTATTTTCATATGTTCA+TGG | + | chr5_1:9187370-9187389 | Msa0715930:intron | 25.0% |
| ! | ATCCATGAACATATGAAAAT+AGG | - | chr5_1:9187375-9187394 | None:intergenic | 25.0% |
| ! | ATAACTATGACTGAAATTTG+AGG | - | chr5_1:9188393-9188412 | None:intergenic | 25.0% |
| ! | TATCATATGCTTGAAATATG+AGG | + | chr5_1:9188416-9188435 | Msa0715930:intron | 25.0% |
| ! | GTTAAAACATTAATAGCAAC+TGG | + | chr5_1:9188609-9188628 | Msa0715930:intron | 25.0% |
| ! | TAAAACATTAATAGCAACTG+GGG | + | chr5_1:9188611-9188630 | Msa0715930:intron | 25.0% |
| ! | TGTTTCCTAATTAGTAACAA+CGG | - | chr5_1:9188911-9188930 | None:intergenic | 25.0% |
| ! | TGAAGGTTTAAATATGAAAG+TGG | + | chr5_1:9189109-9189128 | Msa0715930:CDS | 25.0% |
| ! | AAAGTAACAACTCTTAAGTT+AGG | - | chr5_1:9189274-9189293 | None:intergenic | 25.0% |
| ! | TTTACTTCACTATTGAATGT+AGG | + | chr5_1:9189291-9189310 | Msa0715930:intron | 25.0% |
| ! | TTACTTCACTATTGAATGTA+GGG | + | chr5_1:9189292-9189311 | Msa0715930:intron | 25.0% |
| !!! | TACTTGGTTTTCTTAAAATC+TGG | - | chr5_1:9189479-9189498 | None:intergenic | 25.0% |
| ! | TTTAAGAAAACCAAGTATAG+GGG | + | chr5_1:9189482-9189501 | Msa0715930:CDS | 25.0% |
| ! | CTTTCACTGTATATAATTCA+AGG | + | chr5_1:9189644-9189663 | Msa0715930:intron | 25.0% |
| ! | TATGTTTATAGATTGTTGAC+AGG | + | chr5_1:9189671-9189690 | Msa0715930:intron | 25.0% |
| ! | GCTAAGTTAGACAAAATATA+TGG | + | chr5_1:9189798-9189817 | Msa0715930:intron | 25.0% |
| !! | TAGCTTTCAAATTTTCAACA+TGG | - | chr5_1:9190165-9190184 | None:intergenic | 25.0% |
| !!! | GAATTCTTAAAAAGTGCTTT+AGG | - | chr5_1:9190408-9190427 | None:intergenic | 25.0% |
| !!! | GTTTAAGTTTTGTTGAACAA+AGG | - | chr5_1:9190496-9190515 | None:intergenic | 25.0% |
| ! | TGTTCAACAAAACTTAAACT+CGG | + | chr5_1:9190497-9190516 | Msa0715930:three_prime_UTR | 25.0% |
| TATAGAATGTGGTGAGAAAA+TGG | - | chr5_1:9184962-9184981 | None:intergenic | 30.0% | |
| TCGAAGAATTTCTTCAATTC+AGG | - | chr5_1:9185019-9185038 | None:intergenic | 30.0% | |
| AAGAAATTCTTCGAACTAAC+AGG | + | chr5_1:9185025-9185044 | Msa0715930:five_prime_UTR | 30.0% | |
| ! | AAAGTTTCTTGAAAGCATAG+CGG | + | chr5_1:9185136-9185155 | Msa0715930:intron | 30.0% |
| ! | TATAGCAAGAACTGGATTTT+TGG | + | chr5_1:9185379-9185398 | Msa0715930:intron | 30.0% |
| ! | ATAGCAAGAACTGGATTTTT+GGG | + | chr5_1:9185380-9185399 | Msa0715930:intron | 30.0% |
| AGTAAAATATACCTACAGAC+AGG | + | chr5_1:9185412-9185431 | Msa0715930:intron | 30.0% | |
| ! | GTCTTTAATGCCAATGTTTT+GGG | - | chr5_1:9185438-9185457 | None:intergenic | 30.0% |
| ! | AGTCTTTAATGCCAATGTTT+TGG | - | chr5_1:9185439-9185458 | None:intergenic | 30.0% |
| AAAACATTGGCATTAAAGAC+TGG | + | chr5_1:9185438-9185457 | Msa0715930:intron | 30.0% | |
| AAACATTGGCATTAAAGACT+GGG | + | chr5_1:9185439-9185458 | Msa0715930:intron | 30.0% | |
| !!! | AGAAAGCTTGGTTTTATATG+GGG | - | chr5_1:9185514-9185533 | None:intergenic | 30.0% |
| CAAAATTCAAATGTCAACAC+CGG | - | chr5_1:9185732-9185751 | None:intergenic | 30.0% | |
| !! | TGGCATATTTTCAGGAAAAA+GGG | + | chr5_1:9185849-9185868 | Msa0715930:intron | 30.0% |
| TGGTTTACAAAGTTTCTCAA+TGG | + | chr5_1:9185894-9185913 | Msa0715930:CDS | 30.0% | |
| TCTAATCATAGAATTTCAGG+AGG | + | chr5_1:9185918-9185937 | Msa0715930:CDS | 30.0% | |
| CTAATCATAGAATTTCAGGA+GGG | + | chr5_1:9185919-9185938 | Msa0715930:CDS | 30.0% | |
| ! | AACATGGTGATGATAGAATT+TGG | + | chr5_1:9185955-9185974 | Msa0715930:CDS | 30.0% |
| ! | ACATGGTGATGATAGAATTT+GGG | + | chr5_1:9185956-9185975 | Msa0715930:CDS | 30.0% |
| ! | TGGGTAACATATGTTTCTAA+TGG | + | chr5_1:9186356-9186375 | Msa0715930:intron | 30.0% |
| TTTATCTCATAATGTCTCAG+AGG | + | chr5_1:9186493-9186512 | Msa0715930:intron | 30.0% | |
| ATTCAATTAAGTTTGAGCAC+TGG | + | chr5_1:9186686-9186705 | Msa0715930:CDS | 30.0% | |
| !! | TTGGATTTGCTAATCAGATA+AGG | - | chr5_1:9186803-9186822 | None:intergenic | 30.0% |
| AAAGTGTAAAGGAAAACAAG+GGG | - | chr5_1:9187015-9187034 | None:intergenic | 30.0% | |
| ATTTACTTTGTCACGAAACA+TGG | + | chr5_1:9187347-9187366 | Msa0715930:intron | 30.0% | |
| AAACAAATGAACAACATACC+TGG | + | chr5_1:9187411-9187430 | Msa0715930:intron | 30.0% | |
| TGCAACTTAAAAATCTTCCA+TGG | - | chr5_1:9187488-9187507 | None:intergenic | 30.0% | |
| !!! | TGGAAGATTTTTAAGTTGCA+TGG | + | chr5_1:9187488-9187507 | Msa0715930:CDS | 30.0% |
| !!! | GGAAGATTTTTAAGTTGCAT+GGG | + | chr5_1:9187489-9187508 | Msa0715930:CDS | 30.0% |
| TACTCAGCAATTCATTAGTT+AGG | + | chr5_1:9187643-9187662 | Msa0715930:intron | 30.0% | |
| ACTCAGCAATTCATTAGTTA+GGG | + | chr5_1:9187644-9187663 | Msa0715930:intron | 30.0% | |
| GAAAACTGTAAAGGAACAAA+TGG | - | chr5_1:9187732-9187751 | None:intergenic | 30.0% | |
| ATCAAAGTAGTCTCTTATCA+TGG | + | chr5_1:9187891-9187910 | Msa0715930:intron | 30.0% | |
| AATGACTGCTTCATATATTC+TGG | + | chr5_1:9188160-9188179 | Msa0715930:intron | 30.0% | |
| AACTATATCCAACTCATGAA+GGG | - | chr5_1:9188200-9188219 | None:intergenic | 30.0% | |
| ! | TTCATGAGTTGGATATAGTT+GGG | + | chr5_1:9188200-9188219 | Msa0715930:intron | 30.0% |
| TTTCATTTCAATAACTGGTC+TGG | + | chr5_1:9188232-9188251 | Msa0715930:intron | 30.0% | |
| ! | TCATGTTAGTTTCTCTTTAC+AGG | - | chr5_1:9188347-9188366 | None:intergenic | 30.0% |
| ! | ACTGAAATTTGAGGTTAATC+AGG | - | chr5_1:9188384-9188403 | None:intergenic | 30.0% |
| ! | TGATAGACATGTCATTGTTT+TGG | - | chr5_1:9188667-9188686 | None:intergenic | 30.0% |
| !! | CAGTATTTTTGTATCCAGAA+AGG | - | chr5_1:9188801-9188820 | None:intergenic | 30.0% |
| GTTTCCTAATTAGTAACAAC+GGG | - | chr5_1:9188910-9188929 | None:intergenic | 30.0% | |
| AGTTTGAAAAGACTCGAATT+TGG | - | chr5_1:9189396-9189415 | None:intergenic | 30.0% | |
| ! | TTGTGAAAGCAGATGTTTTA+TGG | - | chr5_1:9189606-9189625 | None:intergenic | 30.0% |
| TTTCTTGCATGATGTTATCA+GGG | - | chr5_1:9189758-9189777 | None:intergenic | 30.0% | |
| ATTTCTTGCATGATGTTATC+AGG | - | chr5_1:9189759-9189778 | None:intergenic | 30.0% | |
| !! | TCTGATTTTGAGAAGAAACT+TGG | + | chr5_1:9190006-9190025 | Msa0715930:CDS | 30.0% |
| ! | TTTTCAACATGGAAAAGTTC+CGG | - | chr5_1:9190154-9190173 | None:intergenic | 30.0% |
| !! | ATTTGATTTGAGAGGATGAA+GGG | - | chr5_1:9190251-9190270 | None:intergenic | 30.0% |
| !! | TATTTGATTTGAGAGGATGA+AGG | - | chr5_1:9190252-9190271 | None:intergenic | 30.0% |
| !! | CAACTGATATTTGATTTGAG+AGG | - | chr5_1:9190259-9190278 | None:intergenic | 30.0% |
| !! | TGAACATACTCTAGAACAAA+AGG | - | chr5_1:9190465-9190484 | None:intergenic | 30.0% |
| ACATAATCTAGTAAAAGGGT+AGG | - | chr5_1:9190585-9190604 | None:intergenic | 30.0% | |
| GTACAGTGATTGATATAGTG+CGG | - | chr5_1:9184836-9184855 | None:intergenic | 35.0% | |
| TGGTAGAAAACTTGTAGAGA+CGG | + | chr5_1:9185190-9185209 | Msa0715930:intron | 35.0% | |
| ! | TAGCAAGAACTGGATTTTTG+GGG | + | chr5_1:9185381-9185400 | Msa0715930:intron | 35.0% |
| ! | GCTGAAGTCTGTTATTGTTT+TGG | + | chr5_1:9185461-9185480 | Msa0715930:intron | 35.0% |
| !! | GTGGCATATTTTCAGGAAAA+AGG | + | chr5_1:9185848-9185867 | Msa0715930:intron | 35.0% |
| ! | GGCTCTAATCATAGAATTTC+AGG | + | chr5_1:9185915-9185934 | Msa0715930:CDS | 35.0% |
| GGATAATCATCATAGTTCAG+TGG | + | chr5_1:9185977-9185996 | Msa0715930:CDS | 35.0% | |
| AGTTAAGTTCCAACTCAAAG+TGG | + | chr5_1:9186336-9186355 | Msa0715930:intron | 35.0% | |
| GTTAAGTTCCAACTCAAAGT+GGG | + | chr5_1:9186337-9186356 | Msa0715930:intron | 35.0% | |
| ATATGTTACCCACTTTGAGT+TGG | - | chr5_1:9186348-9186367 | None:intergenic | 35.0% | |
| CTAATGGTTAGAGATCATTG+AGG | + | chr5_1:9186372-9186391 | Msa0715930:intron | 35.0% | |
| TTTGGTATGGGATAGATGAT+TGG | - | chr5_1:9186449-9186468 | None:intergenic | 35.0% | |
| ! | GAGGCCTTTAACTTATACTT+TGG | - | chr5_1:9186467-9186486 | None:intergenic | 35.0% |
| TATAATTACCTGAATCCTGG+TGG | - | chr5_1:9186767-9186786 | None:intergenic | 35.0% | |
| ACCTAATAAAGTGGACGATA+AGG | + | chr5_1:9186860-9186879 | Msa0715930:intron | 35.0% | |
| GCATATGTACTAAATCTCTG+AGG | - | chr5_1:9186970-9186989 | None:intergenic | 35.0% | |
| AAGTGTAAAGGAAAACAAGG+GGG | - | chr5_1:9187014-9187033 | None:intergenic | 35.0% | |
| ! | AAGGGGACAAAAAAGTGTAA+AGG | - | chr5_1:9187026-9187045 | None:intergenic | 35.0% |
| AAAATGTCGTCCATGAGAAA+GGG | - | chr5_1:9187044-9187063 | None:intergenic | 35.0% | |
| ! | ATGAACAACATACCTGGTTT+TGG | + | chr5_1:9187417-9187436 | Msa0715930:intron | 35.0% |
| ! | CAGAGAAATTTTCCAAAACC+AGG | - | chr5_1:9187432-9187451 | None:intergenic | 35.0% |
| !!! | AGATTTTTAAGTTGCATGGG+AGG | + | chr5_1:9187492-9187511 | Msa0715930:CDS | 35.0% |
| !!! | GATTTTTAAGTTGCATGGGA+GGG | + | chr5_1:9187493-9187512 | Msa0715930:CDS | 35.0% |
| !!! | ATTTTTAAGTTGCATGGGAG+GGG | + | chr5_1:9187494-9187513 | Msa0715930:CDS | 35.0% |
| CTAACCTCATAATCAGTGAT+TGG | - | chr5_1:9187561-9187580 | None:intergenic | 35.0% | |
| CTAGACATGGAAAACTGTAA+AGG | - | chr5_1:9187741-9187760 | None:intergenic | 35.0% | |
| TTACCATAAATCCTGCTACA+GGG | + | chr5_1:9187770-9187789 | Msa0715930:CDS | 35.0% | |
| TCTTGCAAACATCACATCTT+GGG | - | chr5_1:9187806-9187825 | None:intergenic | 35.0% | |
| TTCTTGCAAACATCACATCT+TGG | - | chr5_1:9187807-9187826 | None:intergenic | 35.0% | |
| GCTTCTTAAACATTGAGGTT+GGG | - | chr5_1:9188077-9188096 | None:intergenic | 35.0% | |
| AGCTTCTTAAACATTGAGGT+TGG | - | chr5_1:9188078-9188097 | None:intergenic | 35.0% | |
| GAACAGCTTCTTAAACATTG+AGG | - | chr5_1:9188082-9188101 | None:intergenic | 35.0% | |
| TCTCACTTCTCAAAAATGTG+AGG | + | chr5_1:9188100-9188119 | Msa0715930:intron | 35.0% | |
| AATACTCGAGTATGTTCTTC+TGG | + | chr5_1:9188131-9188150 | Msa0715930:intron | 35.0% | |
| ATACTCGAGTATGTTCTTCT+GGG | + | chr5_1:9188132-9188151 | Msa0715930:intron | 35.0% | |
| GCTTCATATATTCTGGTAAC+CGG | + | chr5_1:9188167-9188186 | Msa0715930:intron | 35.0% | |
| CAACTATATCCAACTCATGA+AGG | - | chr5_1:9188201-9188220 | None:intergenic | 35.0% | |
| ! | CTTCATGAGTTGGATATAGT+TGG | + | chr5_1:9188199-9188218 | Msa0715930:intron | 35.0% |
| !!! | TGAAGGCATTGAATTTTGGA+AGG | - | chr5_1:9188537-9188556 | None:intergenic | 35.0% |
| !!! | TGGTTGAAGGCATTGAATTT+TGG | - | chr5_1:9188541-9188560 | None:intergenic | 35.0% |
| TGCAACAGATATACATCAGA+AGG | + | chr5_1:9188574-9188593 | Msa0715930:intron | 35.0% | |
| GCAACAGATATACATCAGAA+GGG | + | chr5_1:9188575-9188594 | Msa0715930:intron | 35.0% | |
| !!! | CATGTCATTGTTTTGGTAAG+AGG | - | chr5_1:9188660-9188679 | None:intergenic | 35.0% |
| TATTCTTCCATTACAGATCC+CGG | + | chr5_1:9188740-9188759 | Msa0715930:intron | 35.0% | |
| TCTAGTATTTCATGGTAGAG+AGG | - | chr5_1:9189083-9189102 | None:intergenic | 35.0% | |
| ATAACAGAAAGACAGAAGGA+GGG | - | chr5_1:9189251-9189270 | None:intergenic | 35.0% | |
| TAGGATAACAGAAAGACAGA+AGG | - | chr5_1:9189255-9189274 | None:intergenic | 35.0% | |
| !!! | ACAGCCATTCTTGTTTTGTA+TGG | + | chr5_1:9189567-9189586 | Msa0715930:CDS | 35.0% |
| AAGGCCATACAAAACAAGAA+TGG | - | chr5_1:9189574-9189593 | None:intergenic | 35.0% | |
| ! | TGTTTTATGGTTACCTAGGA+AGG | - | chr5_1:9189593-9189612 | None:intergenic | 35.0% |
| ! | CAGATGTTTTATGGTTACCT+AGG | - | chr5_1:9189597-9189616 | None:intergenic | 35.0% |
| TTATAGGTTATCCCAACTTG+AGG | + | chr5_1:9189827-9189846 | Msa0715930:intron | 35.0% | |
| CAGATTCCTTCTTCAATTTC+TGG | - | chr5_1:9189853-9189872 | None:intergenic | 35.0% | |
| TTAGAATCAGAGCTCTATTC+TGG | + | chr5_1:9189895-9189914 | Msa0715930:CDS | 35.0% | |
| GGTCAAATGGATATGATCAA+GGG | - | chr5_1:9190133-9190152 | None:intergenic | 35.0% | |
| CTTGATCATATCCATTTGAC+CGG | + | chr5_1:9190132-9190151 | Msa0715930:CDS | 35.0% | |
| !! | TTTGATTTGAGAGGATGAAG+GGG | - | chr5_1:9190250-9190269 | None:intergenic | 35.0% |
| CAGTTGTCAGATTAATCTGA+TGG | + | chr5_1:9190273-9190292 | Msa0715930:three_prime_UTR | 35.0% | |
| !! | AATCTGATGGTTGATAGTGT+TGG | + | chr5_1:9190286-9190305 | Msa0715930:three_prime_UTR | 35.0% |
| ! | TTCAACGACTGAGTTTTTGT+TGG | + | chr5_1:9190329-9190348 | Msa0715930:three_prime_UTR | 35.0% |
| !!! | AGTTTTGTTGAACAAAGGGT+GGG | - | chr5_1:9190491-9190510 | None:intergenic | 35.0% |
| !!! | AAGTTTTGTTGAACAAAGGG+TGG | - | chr5_1:9190492-9190511 | None:intergenic | 35.0% |
| ATGACTTGATTAGATGAGCT+AGG | - | chr5_1:9190528-9190547 | None:intergenic | 35.0% | |
| AATCTAGTAAAAGGGTAGGT+GGG | - | chr5_1:9190581-9190600 | None:intergenic | 35.0% | |
| TAATCTAGTAAAAGGGTAGG+TGG | - | chr5_1:9190582-9190601 | None:intergenic | 35.0% | |
| CTATCAACACTCTTAACAAC+TGG | + | chr5_1:9190778-9190797 | Msa0715930:three_prime_UTR | 35.0% | |
| AACTTCCACTTCTTTCATGT+TGG | - | chr5_1:9190820-9190839 | None:intergenic | 35.0% | |
| TCGTCAAGATGAAGTCATAG+AGG | - | chr5_1:9184870-9184889 | None:intergenic | 40.0% | |
| GGTGAGAAAATGGAATCTAG+TGG | - | chr5_1:9184952-9184971 | None:intergenic | 40.0% | |
| ! | TACCAGACACGTTTTCGATA+AGG | - | chr5_1:9185229-9185248 | None:intergenic | 40.0% |
| !! | AGCAAGAACTGGATTTTTGG+GGG | + | chr5_1:9185382-9185401 | Msa0715930:intron | 40.0% |
| ! | GAGGGTGTAAATAGAAAGCT+TGG | - | chr5_1:9185526-9185545 | None:intergenic | 40.0% |
| TCTGACATAGATACCAACCA+GGG | - | chr5_1:9185669-9185688 | None:intergenic | 40.0% | |
| GTTAGTGTTCATGTTGTGTC+CGG | + | chr5_1:9185710-9185729 | Msa0715930:intron | 40.0% | |
| TGAAAATATGCCACACAAGC+AGG | - | chr5_1:9185842-9185861 | None:intergenic | 40.0% | |
| ! | TGCTTGTGTGGCATATTTTC+AGG | + | chr5_1:9185841-9185860 | Msa0715930:intron | 40.0% |
| ATTTCAGGAGGGCAATACAA+TGG | + | chr5_1:9185930-9185949 | Msa0715930:CDS | 40.0% | |
| AATTGCACTCTCTCTATCAG+AGG | + | chr5_1:9186162-9186181 | Msa0715930:CDS | 40.0% | |
| TATCAGAGGAGGATCTGAAA+GGG | + | chr5_1:9186176-9186195 | Msa0715930:CDS | 40.0% | |
| CTGAAAGGGAAGAAAGTTGT+TGG | + | chr5_1:9186190-9186209 | Msa0715930:CDS | 40.0% | |
| ATCTCATAATGTCTCAGAGG+AGG | + | chr5_1:9186496-9186515 | Msa0715930:intron | 40.0% | |
| GATGAGGAAGATGAGAATGT+TGG | + | chr5_1:9186557-9186576 | Msa0715930:CDS | 40.0% | |
| !!! | CCTGCTGAATTTTAGCTAGA+AGG | - | chr5_1:9186607-9186626 | None:intergenic | 40.0% |
| ! | CCTTCTAGCTAAAATTCAGC+AGG | + | chr5_1:9186604-9186623 | Msa0715930:CDS | 40.0% |
| !! | GTCTTCCTCAAGTTGATCTT+TGG | - | chr5_1:9186648-9186667 | None:intergenic | 40.0% |
| GCTAGTTGCACCTAATAAAG+TGG | + | chr5_1:9186851-9186870 | Msa0715930:intron | 40.0% | |
| GCCTTATCGTCCACTTTATT+AGG | - | chr5_1:9186864-9186883 | None:intergenic | 40.0% | |
| AGTGTAAAGGAAAACAAGGG+GGG | - | chr5_1:9187013-9187032 | None:intergenic | 40.0% | |
| !!! | CTTTTTTGTCCCCTTTCTCA+TGG | + | chr5_1:9187031-9187050 | Msa0715930:intron | 40.0% |
| AAATGTCGTCCATGAGAAAG+GGG | - | chr5_1:9187043-9187062 | None:intergenic | 40.0% | |
| CAAAATGTCGTCCATGAGAA+AGG | - | chr5_1:9187045-9187064 | None:intergenic | 40.0% | |
| CATAATCAGTGATTGGCAGA+TGG | - | chr5_1:9187554-9187573 | None:intergenic | 40.0% | |
| ! | TCTGCCAATCACTGATTATG+AGG | + | chr5_1:9187554-9187573 | Msa0715930:CDS | 40.0% |
| AGCAGGATTTATGGTAAGGA+CGG | - | chr5_1:9187767-9187786 | None:intergenic | 40.0% | |
| CTGTAGCAGGATTTATGGTA+AGG | - | chr5_1:9187771-9187790 | None:intergenic | 40.0% | |
| CTTACCATAAATCCTGCTAC+AGG | + | chr5_1:9187769-9187788 | Msa0715930:CDS | 40.0% | |
| TGTGTAAAAGAGTCCCACAT+TGG | + | chr5_1:9187973-9187992 | Msa0715930:intron | 40.0% | |
| GTCCCACATTGGATAACAAA+TGG | + | chr5_1:9187984-9188003 | Msa0715930:intron | 40.0% | |
| !! | GGCCATTTGTTATCCAATGT+GGG | - | chr5_1:9187989-9188008 | None:intergenic | 40.0% |
| !! | AGGCCATTTGTTATCCAATG+TGG | - | chr5_1:9187990-9188009 | None:intergenic | 40.0% |
| ! | CCTGAACATGTGTTTAGAGT+GGG | + | chr5_1:9188007-9188026 | Msa0715930:intron | 40.0% |
| ! | CTGAACATGTGTTTAGAGTG+GGG | + | chr5_1:9188008-9188027 | Msa0715930:intron | 40.0% |
| ! | TGAACATGTGTTTAGAGTGG+GGG | + | chr5_1:9188009-9188028 | Msa0715930:intron | 40.0% |
| !! | GGCATTGAATTTTGGAAGGA+AGG | - | chr5_1:9188533-9188552 | None:intergenic | 40.0% |
| AATTCAATGCCTTCAACCAC+AGG | + | chr5_1:9188542-9188561 | Msa0715930:intron | 40.0% | |
| ATTCAATGCCTTCAACCACA+GGG | + | chr5_1:9188543-9188562 | Msa0715930:intron | 40.0% | |
| GATGAGCTCTATACTCAATG+AGG | - | chr5_1:9188779-9188798 | None:intergenic | 40.0% | |
| AGTATAGAGCTCATCCTTTC+TGG | + | chr5_1:9188784-9188803 | Msa0715930:CDS | 40.0% | |
| TTGTTGTAGCTGCGAAAGAA+TGG | + | chr5_1:9188851-9188870 | Msa0715930:CDS | 40.0% | |
| ! | ACAACGGGATGGAATGTTTT+GGG | - | chr5_1:9188895-9188914 | None:intergenic | 40.0% |
| ! | AACAACGGGATGGAATGTTT+TGG | - | chr5_1:9188896-9188915 | None:intergenic | 40.0% |
| CCTAATTAGTAACAACGGGA+TGG | - | chr5_1:9188906-9188925 | None:intergenic | 40.0% | |
| CCATCCCGTTGTTACTAATT+AGG | + | chr5_1:9188903-9188922 | Msa0715930:intron | 40.0% | |
| TTTCTAATCTGTGCAGCCAA+AGG | + | chr5_1:9188971-9188990 | Msa0715930:intron | 40.0% | |
| GTGTCTAGACTCAGCAATTA+TGG | + | chr5_1:9189040-9189059 | Msa0715930:CDS | 40.0% | |
| GTATTTCATGGTAGAGAGGT+TGG | - | chr5_1:9189079-9189098 | None:intergenic | 40.0% | |
| ! | TGTCTTTCCACCAAAAGCAT+AGG | - | chr5_1:9189146-9189165 | None:intergenic | 40.0% |
| GGAAAGACAAGCACTAAATG+AGG | + | chr5_1:9189157-9189176 | Msa0715930:CDS | 40.0% | |
| ! | CACATTCTTTTCTCCCTCAA+TGG | - | chr5_1:9189183-9189202 | None:intergenic | 40.0% |
| GATAACAGAAAGACAGAAGG+AGG | - | chr5_1:9189252-9189271 | None:intergenic | 40.0% | |
| CACCATTTACCTGAAACTAG+AGG | + | chr5_1:9189319-9189338 | Msa0715930:CDS | 40.0% | |
| ! | GTCCTCTAGTTTCAGGTAAA+TGG | - | chr5_1:9189324-9189343 | None:intergenic | 40.0% |
| AAGACTCGAATTTGGAAGCA+AGG | - | chr5_1:9189388-9189407 | None:intergenic | 40.0% | |
| TGGTTATCATGTCTGTGACT+CGG | - | chr5_1:9189515-9189534 | None:intergenic | 40.0% | |
| !! | TTGTTTTGTATGGCCTTCCT+AGG | + | chr5_1:9189577-9189596 | Msa0715930:CDS | 40.0% |
| CATGCATTATCTCATGAGCT+AGG | - | chr5_1:9189703-9189722 | None:intergenic | 40.0% | |
| CTCATGAGATAATGCATGCA+TGG | + | chr5_1:9189705-9189724 | Msa0715930:CDS | 40.0% | |
| TGCATGATGTTATCAGGGAA+CGG | - | chr5_1:9189753-9189772 | None:intergenic | 40.0% | |
| !! | TCAATTTCTGGCCTCAAGTT+GGG | - | chr5_1:9189841-9189860 | None:intergenic | 40.0% |
| !! | TTCAATTTCTGGCCTCAAGT+TGG | - | chr5_1:9189842-9189861 | None:intergenic | 40.0% |
| TTGAGGCCAGAAATTGAAGA+AGG | + | chr5_1:9189844-9189863 | Msa0715930:CDS | 40.0% | |
| AGAAGGAATCTGTCAAGTGT+TGG | + | chr5_1:9189861-9189880 | Msa0715930:CDS | 40.0% | |
| TTCTTCGATGATGCAGAAGA+CGG | - | chr5_1:9189976-9189995 | None:intergenic | 40.0% | |
| TCTTCTGCATCATCGAAGAA+GGG | + | chr5_1:9189976-9189995 | Msa0715930:CDS | 40.0% | |
| ! | CTATGGAGATGGATTCAGAT+CGG | + | chr5_1:9190071-9190090 | Msa0715930:CDS | 40.0% |
| ! | TATGGAGATGGATTCAGATC+GGG | + | chr5_1:9190072-9190091 | Msa0715930:CDS | 40.0% |
| CGGTCAAATGGATATGATCA+AGG | - | chr5_1:9190134-9190153 | None:intergenic | 40.0% | |
| ATGGAAAAGTTCCGGTCAAA+TGG | - | chr5_1:9190146-9190165 | None:intergenic | 40.0% | |
| TATGAACCAATGCCTCATCT+TGG | + | chr5_1:9190203-9190222 | Msa0715930:three_prime_UTR | 40.0% | |
| TAACACTCCATACCAAGATG+AGG | - | chr5_1:9190218-9190237 | None:intergenic | 40.0% | |
| ! | CGACTGAGTTTTTGTTGGAT+AGG | + | chr5_1:9190334-9190353 | Msa0715930:three_prime_UTR | 40.0% |
| ! | ACATTTGCAGTTATGGGTTG+AGG | - | chr5_1:9190552-9190571 | None:intergenic | 40.0% |
| GGTGAGACATTTGCAGTTAT+GGG | - | chr5_1:9190558-9190577 | None:intergenic | 40.0% | |
| ATCTAGTAAAAGGGTAGGTG+GGG | - | chr5_1:9190580-9190599 | None:intergenic | 40.0% | |
| TGTCTCCAACATGAAAGAAG+TGG | + | chr5_1:9190812-9190831 | Msa0715930:three_prime_UTR | 40.0% | |
| TCAATTCAGGAACACCCAGT+AGG | - | chr5_1:9185006-9185025 | None:intergenic | 45.0% | |
| CTCCTTATCGAAAACGTGTC+TGG | + | chr5_1:9185224-9185243 | Msa0715930:intron | 45.0% | |
| ! | ATCCGACATGTGTTGGTATC+AGG | + | chr5_1:9185248-9185267 | Msa0715930:intron | 45.0% |
| ! | TCCGACATGTGTTGGTATCA+GGG | + | chr5_1:9185249-9185268 | Msa0715930:intron | 45.0% |
| !!! | TTTTTTGAGGCCCATACCCT+GGG | - | chr5_1:9185318-9185337 | None:intergenic | 45.0% |
| !!! | TTTTTTTGAGGCCCATACCC+TGG | - | chr5_1:9185319-9185338 | None:intergenic | 45.0% |
| ATACACCCGCACGGTTTATT+GGG | - | chr5_1:9185360-9185379 | None:intergenic | 45.0% | |
| TATACACCCGCACGGTTTAT+TGG | - | chr5_1:9185361-9185380 | None:intergenic | 45.0% | |
| ! | TCTTGCTATATACACCCGCA+CGG | - | chr5_1:9185369-9185388 | None:intergenic | 45.0% |
| CGGGTGTATATAGCAAGAAC+TGG | + | chr5_1:9185371-9185390 | Msa0715930:intron | 45.0% | |
| !! | AATGTTTTGGGCCTGTCTGT+AGG | - | chr5_1:9185426-9185445 | None:intergenic | 45.0% |
| TACAGACAGGCCCAAAACAT+TGG | + | chr5_1:9185425-9185444 | Msa0715930:intron | 45.0% | |
| !! | TCGGTGCTGGAAGTAAAATG+AGG | - | chr5_1:9185624-9185643 | None:intergenic | 45.0% |
| TTCCTACGAATATGGAGGCT+CGG | - | chr5_1:9185643-9185662 | None:intergenic | 45.0% | |
| AGCCTCCATATTCGTAGGAA+CGG | + | chr5_1:9185643-9185662 | Msa0715930:intron | 45.0% | |
| CTCTGACATAGATACCAACC+AGG | - | chr5_1:9185670-9185689 | None:intergenic | 45.0% | |
| ! | TGTTTTGTGACCTGCTTGTG+TGG | + | chr5_1:9185829-9185848 | Msa0715930:intron | 45.0% |
| GGGCAATACAATGGCAAACA+TGG | + | chr5_1:9185939-9185958 | Msa0715930:CDS | 45.0% | |
| AATTGTGGTGAACTGAGTGC+AGG | + | chr5_1:9186099-9186118 | Msa0715930:intron | 45.0% | |
| CTGAGTGCAGGATGATTTGA+CGG | + | chr5_1:9186111-9186130 | Msa0715930:intron | 45.0% | |
| CTATCAGAGGAGGATCTGAA+AGG | + | chr5_1:9186175-9186194 | Msa0715930:CDS | 45.0% | |
| !! | CCTCAAGTTGATCTTTGGCA+CGG | - | chr5_1:9186643-9186662 | None:intergenic | 45.0% |
| AGAGAATCTTTGCCATGTCG+AGG | - | chr5_1:9186719-9186738 | None:intergenic | 45.0% | |
| AACCGTATTGCCATCGTGAA+AGG | + | chr5_1:9187150-9187169 | Msa0715930:intron | 45.0% | |
| ACCGTATTGCCATCGTGAAA+GGG | + | chr5_1:9187151-9187170 | Msa0715930:intron | 45.0% | |
| ACACAAAACCCCTTTCACGA+TGG | - | chr5_1:9187163-9187182 | None:intergenic | 45.0% | |
| TTTCTCTGCAGAATCTGTGC+TGG | + | chr5_1:9187444-9187463 | Msa0715930:intron | 45.0% | |
| TCTCCCTGTAGCAGGATTTA+TGG | - | chr5_1:9187776-9187795 | None:intergenic | 45.0% | |
| GCTGCAATGTACATATGCTC+TGG | + | chr5_1:9187932-9187951 | Msa0715930:intron | 45.0% | |
| GCCTGAACATGTGTTTAGAG+TGG | + | chr5_1:9188006-9188025 | Msa0715930:intron | 45.0% | |
| CCCACTCTAAACACATGTTC+AGG | - | chr5_1:9188010-9188029 | None:intergenic | 45.0% | |
| CTAACACAACCCCACAAAAC+CGG | - | chr5_1:9188053-9188072 | None:intergenic | 45.0% | |
| ATATATTCTGGTAACCGGCC+TGG | + | chr5_1:9188172-9188191 | Msa0715930:intron | 45.0% | |
| ! | CAATAACTGGTCTGGTACTG+TGG | + | chr5_1:9188240-9188259 | Msa0715930:intron | 45.0% |
| TGGTACTGTGGAACAGATCA+TGG | + | chr5_1:9188252-9188271 | Msa0715930:intron | 45.0% | |
| TTCATACTCCCTGTGGTTGA+AGG | - | chr5_1:9188554-9188573 | None:intergenic | 45.0% | |
| TGTTGCATTCATACTCCCTG+TGG | - | chr5_1:9188561-9188580 | None:intergenic | 45.0% | |
| ! | TGCAAGCAACAAGTGTTGTG+TGG | + | chr5_1:9188703-9188722 | Msa0715930:intron | 45.0% |
| GAATTAGCCGGGATCTGTAA+TGG | - | chr5_1:9188750-9188769 | None:intergenic | 45.0% | |
| TTGTAGCTGCGAAAGAATGG+AGG | + | chr5_1:9188854-9188873 | Msa0715930:CDS | 45.0% | |
| ! | GCAGCAAGTTCCTATGCTTT+TGG | + | chr5_1:9189133-9189152 | Msa0715930:CDS | 45.0% |
| ! | GCAAGTTCCTATGCTTTTGG+TGG | + | chr5_1:9189136-9189155 | Msa0715930:CDS | 45.0% |
| AGCACTAAATGAGGCCATTG+AGG | + | chr5_1:9189166-9189185 | Msa0715930:CDS | 45.0% | |
| GCACTAAATGAGGCCATTGA+GGG | + | chr5_1:9189167-9189186 | Msa0715930:CDS | 45.0% | |
| ! | AAGCAGAGTCCTCTAGTTTC+AGG | - | chr5_1:9189331-9189350 | None:intergenic | 45.0% |
| TTGGAAGCAAGGAATCCCTA+CGG | - | chr5_1:9189377-9189396 | None:intergenic | 45.0% | |
| AGAAAACCAAGTATAGGGGC+AGG | + | chr5_1:9189486-9189505 | Msa0715930:CDS | 45.0% | |
| TGCTTTCACAATCTAGCGCT+TGG | + | chr5_1:9189615-9189634 | Msa0715930:intron | 45.0% | |
| AGATAATGCATGCATGGCTC+AGG | + | chr5_1:9189711-9189730 | Msa0715930:CDS | 45.0% | |
| !! | GTCAAGTGTTGGCTCATATG+TGG | + | chr5_1:9189872-9189891 | Msa0715930:CDS | 45.0% |
| TCAGAGCTCTATTCTGGATC+TGG | + | chr5_1:9189901-9189920 | Msa0715930:CDS | 45.0% | |
| CAGAGCTCTATTCTGGATCT+GGG | + | chr5_1:9189902-9189921 | Msa0715930:CDS | 45.0% | |
| GATGATGAAGACGAAGACGA+AGG | - | chr5_1:9189943-9189962 | None:intergenic | 45.0% | |
| GTCTTCTGCATCATCGAAGA+AGG | + | chr5_1:9189975-9189994 | Msa0715930:CDS | 45.0% | |
| ! | GTGAGGTATCTGACTCAATC+TGG | - | chr5_1:9190047-9190066 | None:intergenic | 45.0% |
| CGATCTGAATCCATCTCCAT+AGG | - | chr5_1:9190073-9190092 | None:intergenic | 45.0% | |
| TACCAGGCGGTACTTAAGTA+TGG | + | chr5_1:9190096-9190115 | Msa0715930:CDS | 45.0% | |
| ACCAGGCGGTACTTAAGTAT+GGG | + | chr5_1:9190097-9190116 | Msa0715930:CDS | 45.0% | |
| ACCAATGCCTCATCTTGGTA+TGG | + | chr5_1:9190208-9190227 | Msa0715930:three_prime_UTR | 45.0% | |
| TCCATACCAAGATGAGGCAT+TGG | - | chr5_1:9190212-9190231 | None:intergenic | 45.0% | |
| !! | GGTTGATAGTGTTGGTCTCT+TGG | + | chr5_1:9190294-9190313 | Msa0715930:three_prime_UTR | 45.0% |
| GGGTGAGACATTTGCAGTTA+TGG | - | chr5_1:9190559-9190578 | None:intergenic | 45.0% | |
| TCTAGTAAAAGGGTAGGTGG+GGG | - | chr5_1:9190579-9190598 | None:intergenic | 45.0% | |
| GGTGTGTGAGAACATCTTTG+AGG | + | chr5_1:9190617-9190636 | Msa0715930:three_prime_UTR | 45.0% | |
| GGATCTGTACAAGCTAGTGA+AGG | + | chr5_1:9190638-9190657 | Msa0715930:three_prime_UTR | 45.0% | |
| GTCTGGTATCCGACATGTGT+TGG | + | chr5_1:9185241-9185260 | Msa0715930:intron | 50.0% | |
| GCCCTGATACCAACACATGT+CGG | - | chr5_1:9185253-9185272 | None:intergenic | 50.0% | |
| ! | ACATGTGTTGGTATCAGGGC+TGG | + | chr5_1:9185253-9185272 | Msa0715930:intron | 50.0% |
| !!! | TTTTTGAGGCCCATACCCTG+GGG | - | chr5_1:9185317-9185336 | None:intergenic | 50.0% |
| !! | CACGGTTTATTGGGGGTACT+AGG | - | chr5_1:9185351-9185370 | None:intergenic | 50.0% |
| AGTACCCCCAATAAACCGTG+CGG | + | chr5_1:9185351-9185370 | Msa0715930:intron | 50.0% | |
| TACACCCGCACGGTTTATTG+GGG | - | chr5_1:9185359-9185378 | None:intergenic | 50.0% | |
| TGCACTCTCTCTATCAGAGG+AGG | + | chr5_1:9186165-9186184 | Msa0715930:CDS | 50.0% | |
| CCGTGCCAAAGATCAACTTG+AGG | + | chr5_1:9186640-9186659 | Msa0715930:CDS | 50.0% | |
| AGGAAGACGAGCAACTTGCA+AGG | + | chr5_1:9186660-9186679 | Msa0715930:CDS | 50.0% | |
| GGAAGACGAGCAACTTGCAA+GGG | + | chr5_1:9186661-9186680 | Msa0715930:CDS | 50.0% | |
| GAATCTTTGCCATGTCGAGG+AGG | - | chr5_1:9186716-9186735 | None:intergenic | 50.0% | |
| AATCCTGGTGGAAAGAGGTG+GGG | - | chr5_1:9186755-9186774 | None:intergenic | 50.0% | |
| GAATCCTGGTGGAAAGAGGT+GGG | - | chr5_1:9186756-9186775 | None:intergenic | 50.0% | |
| TGAATCCTGGTGGAAAGAGG+TGG | - | chr5_1:9186757-9186776 | None:intergenic | 50.0% | |
| ACCTCTTTCCACCAGGATTC+AGG | + | chr5_1:9186756-9186775 | Msa0715930:CDS | 50.0% | |
| ACCTGAATCCTGGTGGAAAG+AGG | - | chr5_1:9186760-9186779 | None:intergenic | 50.0% | |
| CCCCTTTCACGATGGCAATA+CGG | - | chr5_1:9187155-9187174 | None:intergenic | 50.0% | |
| CCGTATTGCCATCGTGAAAG+GGG | + | chr5_1:9187152-9187171 | Msa0715930:intron | 50.0% | |
| GCTGGATGCAATGCTGAGAT+TGG | + | chr5_1:9187462-9187481 | Msa0715930:CDS | 50.0% | |
| ! | TGCAATGCTGAGATTGGCCA+TGG | + | chr5_1:9187468-9187487 | Msa0715930:CDS | 50.0% |
| !! | GCATGGCATTGGAAGCATTG+TGG | - | chr5_1:9187528-9187547 | None:intergenic | 50.0% |
| TGATTGGCAGATGGCAAGCA+TGG | - | chr5_1:9187545-9187564 | None:intergenic | 50.0% | |
| GTAAGGACGGTTGCTAGACA+TGG | - | chr5_1:9187754-9187773 | None:intergenic | 50.0% | |
| !! | ACCTCACAAGCCGGTTTTGT+GGG | + | chr5_1:9188040-9188059 | Msa0715930:intron | 50.0% |
| !! | CGGTTTTGTGGGGTTGTGTT+AGG | + | chr5_1:9188051-9188070 | Msa0715930:intron | 50.0% |
| TCCAACTCATGAAGGGATCC+AGG | - | chr5_1:9188193-9188212 | None:intergenic | 50.0% | |
| ATGAGGCCAGCTGAATTAGC+CGG | - | chr5_1:9188762-9188781 | None:intergenic | 50.0% | |
| TGCTGTCGAGCTCATGTGTT+GGG | - | chr5_1:9188824-9188843 | None:intergenic | 50.0% | |
| CTTTCGCAGCTACAACAACG+AGG | - | chr5_1:9188849-9188868 | None:intergenic | 50.0% | |
| AACAAACCGTCACCACCGTA+GGG | + | chr5_1:9189359-9189378 | Msa0715930:intron | 50.0% | |
| ACGGGTCAGTCTATAAGGCT+TGG | - | chr5_1:9189535-9189554 | None:intergenic | 50.0% | |
| CATCGACGGGTCAGTCTATA+AGG | - | chr5_1:9189540-9189559 | None:intergenic | 50.0% | |
| CATGCATGGCTCAGGCTTAA+AGG | + | chr5_1:9189719-9189738 | Msa0715930:CDS | 50.0% | |
| GATGAAGACGAAGACGAAGG+CGG | - | chr5_1:9189940-9189959 | None:intergenic | 50.0% | |
| TTCGATGATGCAGAAGACGG+CGG | - | chr5_1:9189973-9189992 | None:intergenic | 50.0% | |
| TCAGATACCTCACCAGCCTA+TGG | + | chr5_1:9190054-9190073 | Msa0715930:CDS | 50.0% | |
| CTGAATCCATCTCCATAGGC+TGG | - | chr5_1:9190069-9190088 | None:intergenic | 50.0% | |
| TGGATTCAGATCGGGTTACC+AGG | + | chr5_1:9190080-9190099 | Msa0715930:CDS | 50.0% | |
| ATTCAGATCGGGTTACCAGG+CGG | + | chr5_1:9190083-9190102 | Msa0715930:CDS | 50.0% | |
| AGAGGATGAAGGGGCTAGAT+GGG | - | chr5_1:9190241-9190260 | None:intergenic | 50.0% | |
| GTACCCCCAATAAACCGTGC+GGG | + | chr5_1:9185352-9185371 | Msa0715930:intron | 55.0% | |
| ACACCCGCACGGTTTATTGG+GGG | - | chr5_1:9185358-9185377 | None:intergenic | 55.0% | |
| CACCGAGCCTCCATATTCGT+AGG | + | chr5_1:9185638-9185657 | Msa0715930:intron | 55.0% | |
| GGCCGTTCCTACGAATATGG+AGG | - | chr5_1:9185648-9185667 | None:intergenic | 55.0% | |
| CAGGGCCGTTCCTACGAATA+TGG | - | chr5_1:9185651-9185670 | None:intergenic | 55.0% | |
| CATATTCGTAGGAACGGCCC+TGG | + | chr5_1:9185649-9185668 | Msa0715930:intron | 55.0% | |
| ! | ACTGGTTCTCCTCCTCGACA+TGG | + | chr5_1:9186704-9186723 | Msa0715930:CDS | 55.0% |
| TAAGTTGCATGGGAGGGGTC+TGG | + | chr5_1:9187499-9187518 | Msa0715930:CDS | 55.0% | |
| GCAGATGGCAAGCATGGCAT+TGG | - | chr5_1:9187539-9187558 | None:intergenic | 55.0% | |
| GTGATGCTTCTCCCTGTAGC+AGG | - | chr5_1:9187784-9187803 | None:intergenic | 55.0% | |
| GCAATCCTCACCTCACAAGC+CGG | + | chr5_1:9188031-9188050 | Msa0715930:intron | 55.0% | |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | - | chr5_1:9188039-9188058 | None:intergenic | 55.0% |
| !! | CACCTCACAAGCCGGTTTTG+TGG | + | chr5_1:9188039-9188058 | Msa0715930:intron | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+GGG | + | chr5_1:9188041-9188060 | Msa0715930:intron | 55.0% |
| ACTCATGAAGGGATCCAGGC+CGG | - | chr5_1:9188189-9188208 | None:intergenic | 55.0% | |
| GCCTGGATCCCTTCATGAGT+TGG | + | chr5_1:9188189-9188208 | Msa0715930:intron | 55.0% | |
| CAGATCCCGGCTAATTCAGC+TGG | + | chr5_1:9188753-9188772 | Msa0715930:intron | 55.0% | |
| TGAGGCCAGCTGAATTAGCC+GGG | - | chr5_1:9188761-9188780 | None:intergenic | 55.0% | |
| GTGCTGTCGAGCTCATGTGT+TGG | - | chr5_1:9188825-9188844 | None:intergenic | 55.0% | |
| GAACAAACCGTCACCACCGT+AGG | + | chr5_1:9189358-9189377 | Msa0715930:intron | 55.0% | |
| AGGAATCCCTACGGTGGTGA+CGG | - | chr5_1:9189368-9189387 | None:intergenic | 55.0% | |
| GAAGCAAGGAATCCCTACGG+TGG | - | chr5_1:9189374-9189393 | None:intergenic | 55.0% | |
| ! | TGGCTGTCACTTCGCATCGA+CGG | - | chr5_1:9189554-9189573 | None:intergenic | 55.0% |
| ACCTCACCAGCCTATGGAGA+TGG | + | chr5_1:9190060-9190079 | Msa0715930:CDS | 55.0% | |
| TCCATCTCCATAGGCTGGTG+AGG | - | chr5_1:9190064-9190083 | None:intergenic | 55.0% | |
| ! | GCCCATACTTAAGTACCGCC+TGG | - | chr5_1:9190101-9190120 | None:intergenic | 55.0% |
| GAGAGGATGAAGGGGCTAGA+TGG | - | chr5_1:9190242-9190261 | None:intergenic | 55.0% | |
| TTGGTATCAGGGCTGGACCC+TGG | + | chr5_1:9185260-9185279 | Msa0715930:intron | 60.0% | |
| TGGTATCAGGGCTGGACCCT+GGG | + | chr5_1:9185261-9185280 | Msa0715930:intron | 60.0% | |
| ! | TATAGCACCGAGCCTCCCCA+GGG | + | chr5_1:9185299-9185318 | Msa0715930:intron | 60.0% |
| !! | CGAATATGGAGGCTCGGTGC+TGG | - | chr5_1:9185637-9185656 | None:intergenic | 60.0% |
| TTCGTAGGAACGGCCCTGGT+TGG | + | chr5_1:9185653-9185672 | Msa0715930:intron | 60.0% | |
| GGTGGAAAGAGGTGGGGAGA+AGG | - | chr5_1:9186749-9186768 | None:intergenic | 60.0% | |
| TCTCCCCACCTCTTTCCACC+AGG | + | chr5_1:9186749-9186768 | Msa0715930:CDS | 60.0% | |
| !! | CCCCACAAAACCGGCTTGTG+AGG | - | chr5_1:9188044-9188063 | None:intergenic | 60.0% |
| CGGTGTCCTGCCCCTATACT+TGG | - | chr5_1:9189495-9189514 | None:intergenic | 60.0% | |
| ! | GGCTGTCACTTCGCATCGAC+GGG | - | chr5_1:9189553-9189572 | None:intergenic | 60.0% |
| GGTATCAGGGCTGGACCCTG+GGG | + | chr5_1:9185262-9185281 | Msa0715930:intron | 65.0% | |
| GTATCAGGGCTGGACCCTGG+GGG | + | chr5_1:9185263-9185282 | Msa0715930:intron | 65.0% | |
| TATCAGGGCTGGACCCTGGG+GGG | + | chr5_1:9185264-9185283 | Msa0715930:intron | 65.0% | |
| ! | CTATAGCACCGAGCCTCCCC+AGG | + | chr5_1:9185298-9185317 | Msa0715930:intron | 65.0% |
| ACCGAGCCTCCCCAGGGTAT+GGG | + | chr5_1:9185305-9185324 | Msa0715930:intron | 65.0% | |
| TTGAGGCCCATACCCTGGGG+AGG | - | chr5_1:9185314-9185333 | None:intergenic | 65.0% | |
| AGCGCTGCTTGCACCCCCCA+GGG | - | chr5_1:9185280-9185299 | None:intergenic | 70.0% | |
| TAGCGCTGCTTGCACCCCCC+AGG | - | chr5_1:9185281-9185300 | None:intergenic | 70.0% | |
| CACCGAGCCTCCCCAGGGTA+TGG | + | chr5_1:9185304-9185323 | Msa0715930:intron | 70.0% | |
| GCCCATACCCTGGGGAGGCT+CGG | - | chr5_1:9185309-9185328 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 9184827 | 9190868 | 9184827 | ID=Msa0715930;Name=Msa0715930 |
| chr5_1 | mRNA | 9184827 | 9190868 | 9184827 | ID=Msa0715930-mRNA-1;Parent=Msa0715930;Name=Msa0715930-mRNA-1;_AED=0.10;_eAED=0.10;_QI=245|1|1|1|0.90|0.91|12|698|527 |
| chr5_1 | exon | 9184827 | 9185046 | 9184827 | ID=Msa0715930-mRNA-1:exon:3720;Parent=Msa0715930-mRNA-1 |
| chr5_1 | exon | 9185863 | 9185998 | 9185863 | ID=Msa0715930-mRNA-1:exon:3721;Parent=Msa0715930-mRNA-1 |
| chr5_1 | exon | 9186121 | 9186211 | 9186121 | ID=Msa0715930-mRNA-1:exon:3722;Parent=Msa0715930-mRNA-1 |
| chr5_1 | exon | 9186513 | 9186777 | 9186513 | ID=Msa0715930-mRNA-1:exon:3723;Parent=Msa0715930-mRNA-1 |
| chr5_1 | exon | 9187455 | 9187575 | 9187455 | ID=Msa0715930-mRNA-1:exon:3724;Parent=Msa0715930-mRNA-1 |
| chr5_1 | exon | 9187747 | 9187830 | 9187747 | ID=Msa0715930-mRNA-1:exon:3725;Parent=Msa0715930-mRNA-1 |
| chr5_1 | exon | 9188756 | 9188875 | 9188756 | ID=Msa0715930-mRNA-1:exon:3726;Parent=Msa0715930-mRNA-1 |
| chr5_1 | exon | 9188987 | 9189199 | 9188987 | ID=Msa0715930-mRNA-1:exon:3727;Parent=Msa0715930-mRNA-1 |
| chr5_1 | exon | 9189313 | 9189375 | 9189313 | ID=Msa0715930-mRNA-1:exon:3728;Parent=Msa0715930-mRNA-1 |
| chr5_1 | exon | 9189480 | 9189598 | 9189480 | ID=Msa0715930-mRNA-1:exon:3729;Parent=Msa0715930-mRNA-1 |
| chr5_1 | exon | 9189682 | 9189740 | 9189682 | ID=Msa0715930-mRNA-1:exon:3730;Parent=Msa0715930-mRNA-1 |
| chr5_1 | exon | 9189833 | 9190868 | 9189833 | ID=Msa0715930-mRNA-1:exon:3731;Parent=Msa0715930-mRNA-1 |
| chr5_1 | five_prime_UTR | 9184827 | 9185046 | 9184827 | ID=Msa0715930-mRNA-1:five_prime_utr;Parent=Msa0715930-mRNA-1 |
| chr5_1 | five_prime_UTR | 9185863 | 9185887 | 9185863 | ID=Msa0715930-mRNA-1:five_prime_utr;Parent=Msa0715930-mRNA-1 |
| chr5_1 | CDS | 9185888 | 9185998 | 9185888 | ID=Msa0715930-mRNA-1:cds;Parent=Msa0715930-mRNA-1 |
| chr5_1 | CDS | 9186121 | 9186211 | 9186121 | ID=Msa0715930-mRNA-1:cds;Parent=Msa0715930-mRNA-1 |
| chr5_1 | CDS | 9186513 | 9186777 | 9186513 | ID=Msa0715930-mRNA-1:cds;Parent=Msa0715930-mRNA-1 |
| chr5_1 | CDS | 9187455 | 9187575 | 9187455 | ID=Msa0715930-mRNA-1:cds;Parent=Msa0715930-mRNA-1 |
| chr5_1 | CDS | 9187747 | 9187830 | 9187747 | ID=Msa0715930-mRNA-1:cds;Parent=Msa0715930-mRNA-1 |
| chr5_1 | CDS | 9188756 | 9188875 | 9188756 | ID=Msa0715930-mRNA-1:cds;Parent=Msa0715930-mRNA-1 |
| chr5_1 | CDS | 9188987 | 9189199 | 9188987 | ID=Msa0715930-mRNA-1:cds;Parent=Msa0715930-mRNA-1 |
| chr5_1 | CDS | 9189313 | 9189375 | 9189313 | ID=Msa0715930-mRNA-1:cds;Parent=Msa0715930-mRNA-1 |
| chr5_1 | CDS | 9189480 | 9189598 | 9189480 | ID=Msa0715930-mRNA-1:cds;Parent=Msa0715930-mRNA-1 |
| chr5_1 | CDS | 9189682 | 9189740 | 9189682 | ID=Msa0715930-mRNA-1:cds;Parent=Msa0715930-mRNA-1 |
| chr5_1 | CDS | 9189833 | 9190170 | 9189833 | ID=Msa0715930-mRNA-1:cds;Parent=Msa0715930-mRNA-1 |
| chr5_1 | three_prime_UTR | 9190171 | 9190868 | 9190171 | ID=Msa0715930-mRNA-1:three_prime_utr;Parent=Msa0715930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
