AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0716010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0716010 MtrunA17_Chr5g0403361 96.840 443 14 0 1 443 203 645 0.0 895
Msa0716010 MtrunA17_Chr5g0403371 75.949 237 11 1 443 633 185 421 1.84e-108 339
Msa0716010 MtrunA17_Chr8g0373711 45.344 247 72 6 443 633 178 417 1.32e-50 185
Msa0716010 MtrunA17_Chr5g0403381 41.860 129 72 2 505 633 334 459 1.64e-24 108
Msa0716010 MtrunA17_Chr5g0418011 46.774 124 59 2 510 632 13 130 2.47e-23 101
Msa0716010 MtrunA17_Chr1g0154511 42.975 121 61 3 515 633 332 446 1.18e-21 99.8
Msa0716010 MtrunA17_Chr8g0368871 28.251 223 154 4 208 429 5 222 7.42e-21 91.7
Msa0716010 MtrunA17_Chr8g0368891 28.767 219 150 4 208 425 446 659 9.83e-21 96.7
Msa0716010 MtrunA17_Chr5g0439334 42.975 121 66 2 514 632 342 461 3.62e-20 95.1
Msa0716010 MtrunA17_Chr3g0119351 42.149 121 63 4 514 632 367 482 5.34e-20 94.4
Msa0716010 MtrunA17_Chr3g0093791 24.603 252 186 1 163 414 290 537 4.89e-18 88.6
Msa0716010 MtrunA17_Chr6g0479541 24.594 431 254 10 13 406 193 589 1.95e-17 86.3
Msa0716010 MtrunA17_Chr6g0479541 26.214 206 144 3 208 411 290 489 2.15e-11 67.0
Msa0716010 MtrunA17_Chr3g0136851 23.011 465 301 13 1 455 226 643 8.49e-17 84.7
Msa0716010 MtrunA17_Chr3g0136851 24.569 232 164 3 183 411 101 324 3.25e-13 73.2
Msa0716010 MtrunA17_Chr3g0136851 26.316 209 139 4 209 414 832 1028 6.02e-12 69.3
Msa0716010 MtrunA17_Chr5g0446031 24.374 439 271 14 1 425 299 690 5.02e-15 79.0
Msa0716010 MtrunA17_Chr5g0446031 21.970 264 198 4 156 416 74 332 2.43e-13 73.6
Msa0716010 MtrunA17_Chr2g0331911 23.973 292 190 2 163 422 75 366 1.10e-14 77.4
Msa0716010 MtrunA17_Chr6g0471201 24.537 216 156 2 202 414 297 508 1.63e-14 76.6
Msa0716010 MtrunA17_Chr3g0133151 24.272 309 187 7 149 414 24 328 1.92e-14 76.3
Msa0716010 MtrunA17_Chr5g0413071 36.923 130 70 4 512 633 293 418 2.13e-14 76.6
Msa0716010 MtrunA17_Chr1g0210801 29.630 135 95 0 290 424 245 379 2.69e-14 76.3
Msa0716010 MtrunA17_Chr1g0210801 24.457 184 135 2 223 406 217 396 2.76e-13 72.8
Msa0716010 MtrunA17_Chr7g0225871 34.375 128 72 5 516 632 44 170 2.75e-14 75.1
Msa0716010 MtrunA17_Chr7g0276351 26.695 236 157 4 183 411 45 271 3.30e-14 75.5
Msa0716010 MtrunA17_Chr6g0481431 25.446 224 162 3 206 429 3 221 3.31e-14 73.2
Msa0716010 MtrunA17_Chr7g0231941 22.000 250 154 6 163 411 71 280 3.40e-14 76.3
Msa0716010 MtrunA17_Chr3g0119241 35.099 151 81 5 492 633 285 427 3.45e-14 75.9
Msa0716010 MtrunA17_Chr6g0481751 27.344 128 93 0 287 414 227 354 3.74e-14 75.1
Msa0716010 MtrunA17_Chr6g0481751 24.766 214 153 3 208 419 257 464 8.25e-12 67.8
Msa0716010 MtrunA17_Chr1g0182521 28.994 169 111 3 254 417 453 617 5.45e-14 75.5
Msa0716010 MtrunA17_Chr1g0182521 25.854 205 132 2 215 411 239 431 6.48e-14 75.1
Msa0716010 MtrunA17_Chr6g0471531 32.026 153 100 2 262 414 373 521 7.57e-14 74.7
Msa0716010 MtrunA17_Chr1g0170071 29.050 179 121 4 235 412 570 743 7.90e-14 75.1
Msa0716010 MtrunA17_Chr8g0393001 21.495 214 165 1 171 384 58 268 1.00e-13 74.3
Msa0716010 MtrunA17_Chr6g0483431 26.627 169 120 1 243 411 236 400 1.05e-13 73.6
Msa0716010 MtrunA17_Chr6g0478551 29.000 200 138 2 212 411 301 496 1.15e-13 73.9
Msa0716010 MtrunA17_Chr6g0478551 27.273 143 104 0 287 429 232 374 2.44e-11 66.6
Msa0716010 MtrunA17_Chr6g0478551 31.148 122 84 0 290 411 270 391 4.77e-11 65.9
Msa0716010 MtrunA17_Chr7g0218641 29.282 181 123 3 249 429 340 515 1.45e-13 73.9
Msa0716010 MtrunA17_Chr6g0481621 28.161 174 121 2 258 428 368 540 1.89e-13 73.6
Msa0716010 MtrunA17_Chr6g0481621 23.153 406 256 12 12 405 192 553 1.07e-12 70.9
Msa0716010 MtrunA17_Chr6g0481621 27.407 135 98 0 290 424 263 397 1.39e-12 70.9
Msa0716010 MtrunA17_Chr6g0481621 27.966 118 85 0 290 407 298 415 6.45e-11 65.5
Msa0716010 MtrunA17_Chr1g0176791 23.013 239 179 3 188 425 176 410 2.31e-13 73.6
Msa0716010 MtrunA17_Chr1g0176791 21.041 461 305 12 1 411 437 888 2.69e-13 73.6
Msa0716010 MtrunA17_Chr1g0176791 30.000 130 90 1 283 411 864 993 5.89e-13 72.4
Msa0716010 MtrunA17_Chr6g0473341 27.869 122 88 0 290 411 270 391 2.48e-13 73.2
Msa0716010 MtrunA17_Chr6g0471481 27.966 118 85 0 290 407 96 213 2.52e-13 71.2
Msa0716010 MtrunA17_Chr8g0392911 28.169 213 118 5 226 407 317 525 2.69e-13 73.2
Msa0716010 MtrunA17_Chr8g0392911 32.203 118 80 0 290 407 268 385 5.46e-11 65.9
Msa0716010 MtrunA17_Chr8g0375231 33.036 112 75 0 293 404 225 336 3.13e-13 73.2
Msa0716010 MtrunA17_Chr6g0473241 27.869 122 88 0 290 411 270 391 3.19e-13 72.8
Msa0716010 MtrunA17_Chr6g0481981 22.581 248 160 3 212 428 176 422 3.66e-13 72.0
Msa0716010 MtrunA17_Chr3g0143411 21.759 216 164 1 199 414 129 339 4.43e-13 72.0
Msa0716010 MtrunA17_Chr2g0296811 26.289 194 104 4 253 411 15 204 4.66e-13 68.9
Msa0716010 MtrunA17_Chr4g0009441 21.495 214 163 2 199 411 84 293 4.88e-13 72.0
Msa0716010 MtrunA17_Chr3g0091741 28.962 183 114 4 261 437 101 273 5.38e-13 72.0
Msa0716010 MtrunA17_Chr1g0171281 28.676 136 97 0 290 425 236 371 5.49e-13 72.0
Msa0716010 MtrunA17_Chr3g0085871 23.200 250 188 2 162 411 104 349 5.62e-13 72.0
Msa0716010 MtrunA17_Chr5g0412071 23.005 426 244 9 1 422 461 806 5.65e-13 72.4
Msa0716010 MtrunA17_Chr5g0412071 27.344 128 93 0 287 414 435 562 4.50e-12 69.3
Msa0716010 MtrunA17_Chr5g0412071 22.176 239 159 4 193 411 83 314 6.45e-12 68.9
Msa0716010 MtrunA17_Chr5g0412071 29.008 131 93 0 290 420 368 498 2.83e-11 67.0
Msa0716010 MtrunA17_Chr4g0048611 24.567 289 163 5 290 523 331 619 5.73e-13 72.4
Msa0716010 MtrunA17_Chr8g0391651 22.897 214 155 2 206 416 480 686 7.79e-13 71.6
Msa0716010 MtrunA17_Chr8g0391651 23.445 209 156 1 208 416 307 511 6.35e-12 68.9
Msa0716010 MtrunA17_Chr6g0482991 26.667 165 86 1 287 416 21 185 7.80e-13 67.8
Msa0716010 MtrunA17_Chr4g0058401 23.967 242 175 5 163 400 212 448 8.01e-13 71.6
Msa0716010 MtrunA17_Chr2g0282801 29.600 125 88 0 290 414 194 318 8.85e-13 70.9
Msa0716010 MtrunA17_Chr6g0478271 29.008 131 93 0 290 420 33 163 8.91e-13 67.8
Msa0716010 MtrunA17_Chr6g0482541 22.490 249 161 3 212 429 111 358 9.86e-13 70.5
Msa0716010 MtrunA17_Chr6g0482541 26.866 134 96 1 290 421 80 213 1.43e-11 66.6
Msa0716010 MtrunA17_Chr2g0284291 22.951 244 181 4 169 411 171 408 1.05e-12 71.2
Msa0716010 MtrunA17_Chr5g0434451 23.887 247 177 3 182 425 196 434 1.18e-12 70.9
Msa0716010 MtrunA17_Chr5g0434451 28.125 128 92 0 287 414 366 493 8.46e-11 65.1
Msa0716010 MtrunA17_Chr5g0434451 22.619 252 182 5 208 452 326 571 9.89e-11 64.7
Msa0716010 MtrunA17_Chr2g0297211 29.747 158 99 2 259 411 363 513 1.36e-12 71.2
Msa0716010 MtrunA17_Chr5g0396041 25.389 193 140 2 208 400 436 624 1.41e-12 71.2
Msa0716010 MtrunA17_Chr5g0396041 22.727 198 149 1 208 405 401 594 1.51e-12 71.2
Msa0716010 MtrunA17_Chr5g0396041 29.600 125 88 0 290 414 374 498 1.21e-11 68.2
Msa0716010 MtrunA17_Chr1g0160881 26.957 230 159 2 208 437 307 527 1.53e-12 70.9
Msa0716010 MtrunA17_Chr6g0472611 30.952 168 111 3 262 429 357 519 1.60e-12 70.5
Msa0716010 MtrunA17_Chr2g0296401 22.333 300 203 5 154 431 62 353 1.74e-12 70.5
Msa0716010 MtrunA17_Chr7g0217921 22.909 275 179 8 165 414 51 317 1.76e-12 70.5
Msa0716010 MtrunA17_Chr6g0478291 29.771 131 92 0 290 420 382 512 1.77e-12 70.5
Msa0716010 MtrunA17_Chr6g0482571 23.474 213 118 3 242 416 194 399 1.96e-12 69.7
Msa0716010 MtrunA17_Chr6g0482571 29.508 122 86 0 290 411 98 219 1.98e-11 66.2
Msa0716010 MtrunA17_Chr7g0238461 24.468 282 166 7 178 416 43 320 2.01e-12 70.1
Msa0716010 MtrunA17_Chr4g0060531 38.806 134 54 5 521 632 75 202 2.29e-12 69.3
Msa0716010 MtrunA17_Chr4g0019851 26.531 147 104 1 290 432 302 448 2.29e-12 69.7
Msa0716010 MtrunA17_Chr8g0340721 33.846 130 74 4 512 633 341 466 2.31e-12 70.1
Msa0716010 MtrunA17_Chr6g0482561 26.984 189 127 3 243 428 177 357 2.45e-12 69.3
Msa0716010 MtrunA17_Chr3g0102971 26.203 187 134 1 234 420 76 258 2.49e-12 68.2
Msa0716010 MtrunA17_Chr6g0481991 24.638 207 148 2 212 416 302 502 2.65e-12 69.7
Msa0716010 MtrunA17_Chr5g0410901 20.920 435 302 12 5 416 240 655 2.67e-12 70.1
Msa0716010 MtrunA17_Chr6g0482921 26.404 178 127 1 243 420 75 248 2.76e-12 67.8
Msa0716010 MtrunA17_Chr8g0359551 29.114 158 108 2 254 411 358 511 3.11e-12 69.7
Msa0716010 MtrunA17_Chr8g0359551 27.536 138 95 1 289 421 354 491 8.17e-11 65.1
Msa0716010 MtrunA17_Chr4g0060641 23.000 200 150 2 212 411 110 305 3.12e-12 69.7
Msa0716010 MtrunA17_Chr6g0482611 25.000 200 139 3 249 445 349 540 3.57e-12 69.3
Msa0716010 MtrunA17_Chr6g0482611 28.689 122 87 0 290 411 246 367 4.40e-12 68.9
Msa0716010 MtrunA17_Chr6g0482611 28.814 118 84 0 290 407 281 398 3.90e-11 65.9
Msa0716010 MtrunA17_Chr6g0471871 29.762 168 113 2 262 429 362 524 3.64e-12 69.3
Msa0716010 MtrunA17_Chr6g0471871 29.508 122 86 0 290 411 281 402 6.81e-11 65.1
Msa0716010 MtrunA17_Chr5g0442231 21.852 270 192 3 147 416 44 294 4.35e-12 69.3
Msa0716010 MtrunA17_Chr4g0059641 28.244 131 94 0 290 420 153 283 4.77e-12 67.8
Msa0716010 MtrunA17_Chr6g0473381 26.108 203 142 4 227 429 145 339 6.15e-12 67.8
Msa0716010 MtrunA17_Chr6g0482901 31.200 125 86 0 290 414 386 510 6.92e-12 68.6
Msa0716010 MtrunA17_Chr6g0478251 28.846 104 74 0 287 390 34 137 7.56e-12 63.5
Msa0716010 MtrunA17_Chr2g0285331 26.087 276 179 6 156 420 140 401 8.73e-12 68.6
Msa0716010 MtrunA17_Chr3g0126831 21.456 261 179 5 179 414 63 322 9.39e-12 68.2
Msa0716010 MtrunA17_Chr6g0482821 22.177 248 161 3 212 428 275 521 9.44e-12 68.2
Msa0716010 MtrunA17_Chr6g0482821 27.869 122 88 0 290 411 244 365 3.33e-11 66.2
Msa0716010 MtrunA17_Chr6g0482971 27.749 191 128 4 259 447 343 525 1.08e-11 67.8
Msa0716010 MtrunA17_Chr1g0168761 22.541 244 158 2 212 424 258 501 1.21e-11 67.8
Msa0716010 MtrunA17_Chr4g0033981 25.121 207 151 2 208 414 352 554 1.26e-11 67.8
Msa0716010 MtrunA17_Chr2g0297991 27.879 165 115 2 250 414 415 575 1.28e-11 67.8
Msa0716010 MtrunA17_Chr3g0079211 29.032 124 87 1 290 412 318 441 1.29e-11 67.4
Msa0716010 MtrunA17_Chr1g0149711 35.772 123 61 5 523 633 84 200 1.31e-11 67.0
Msa0716010 MtrunA17_Chr6g0482601 21.951 246 160 3 212 426 184 428 1.31e-11 67.4
Msa0716010 MtrunA17_Chr6g0482601 27.826 115 83 0 290 404 153 267 3.97e-11 65.9
Msa0716010 MtrunA17_Chr6g0482581 28.571 105 75 0 287 391 34 138 1.38e-11 62.8
Msa0716010 MtrunA17_Chr6g0476151 24.878 205 150 2 212 416 269 469 1.57e-11 67.4
Msa0716010 MtrunA17_Chr6g0481601 28.369 141 97 2 243 383 360 496 1.62e-11 67.0
Msa0716010 MtrunA17_Chr6g0481601 28.319 113 80 1 279 391 218 329 2.02e-11 66.6
Msa0716010 MtrunA17_Chr6g0481601 28.571 126 84 1 313 438 321 440 6.16e-11 65.1
Msa0716010 MtrunA17_Chr4g0050481 25.207 242 170 6 171 406 60 296 1.69e-11 67.0
Msa0716010 MtrunA17_Chr1g0162281 23.504 234 157 3 181 414 180 391 1.84e-11 67.4
Msa0716010 MtrunA17_Chr5g0406841 37.895 95 47 3 545 632 178 267 1.97e-11 66.6
Msa0716010 MtrunA17_Chr8g0369641 23.333 210 155 2 206 414 554 758 2.02e-11 67.4
Msa0716010 MtrunA17_Chr4g0064511 32.778 180 95 7 466 632 160 326 2.23e-11 66.6
Msa0716010 MtrunA17_Chr6g0473331 28.689 122 87 0 290 411 308 429 2.35e-11 66.6
Msa0716010 MtrunA17_Chr6g0471491 29.508 122 86 0 302 423 73 194 2.44e-11 64.3
Msa0716010 MtrunA17_Chr6g0458411 24.091 220 162 2 192 411 284 498 2.55e-11 66.6
Msa0716010 MtrunA17_Chr3g0125131 23.361 244 180 5 169 411 52 289 2.85e-11 66.2
Msa0716010 MtrunA17_Chr6g0478241 30.928 97 67 0 309 405 12 108 2.95e-11 61.2
Msa0716010 MtrunA17_Chr6g0478261 29.341 167 113 3 262 428 355 516 3.66e-11 66.2
Msa0716010 MtrunA17_Chr6g0478261 29.508 122 86 0 290 411 414 535 7.03e-11 65.1
Msa0716010 MtrunA17_Chr6g0473261 23.153 203 152 1 212 414 314 512 4.12e-11 65.9
Msa0716010 MtrunA17_Chr8g0369501 21.032 252 176 4 170 411 104 342 4.17e-11 66.2
Msa0716010 MtrunA17_Chr2g0312191 21.241 419 287 11 1 414 124 504 4.29e-11 65.9
Msa0716010 MtrunA17_Chr6g0473471 27.049 122 89 0 290 411 165 286 4.57e-11 65.5
Msa0716010 MtrunA17_Chr6g0473501 27.049 122 89 0 290 411 165 286 4.61e-11 65.5
Msa0716010 MtrunA17_Chr5g0415451 33.088 136 73 5 513 633 412 544 4.78e-11 65.9
Msa0716010 MtrunA17_Chr2g0288121 36.508 126 62 5 521 633 35 155 4.82e-11 64.7
Msa0716010 MtrunA17_Chr6g0478691 25.610 164 85 1 290 416 456 619 5.10e-11 65.9
Msa0716010 MtrunA17_Chr1g0168811 23.645 203 145 2 212 411 356 551 5.18e-11 65.9
Msa0716010 MtrunA17_Chr4g0034931 37.209 129 64 6 516 632 128 251 5.46e-11 65.5
Msa0716010 MtrunA17_Chr6g0473251 21.293 263 144 4 212 411 266 528 5.50e-11 65.5
Msa0716010 MtrunA17_Chr6g0478001 28.571 119 85 0 287 405 420 538 5.79e-11 65.5
Msa0716010 MtrunA17_Chr6g0482751 29.771 131 92 0 290 420 380 510 6.29e-11 65.5
Msa0716010 MtrunA17_Chr6g0449581 23.944 213 151 5 201 407 247 454 6.36e-11 65.5
Msa0716010 MtrunA17_Chr4g0060341 22.936 218 158 2 206 420 301 511 6.44e-11 65.5
Msa0716010 MtrunA17_Chr3g0099661 23.556 225 161 5 196 415 187 405 6.55e-11 65.9
Msa0716010 MtrunA17_Chr6g0473441 26.230 122 90 0 290 411 270 391 6.68e-11 65.5
Msa0716010 MtrunA17_Chr6g0473491 26.230 122 90 0 290 411 270 391 6.69e-11 65.1
Msa0716010 MtrunA17_Chr6g0477511 25.735 136 100 1 279 414 242 376 6.72e-11 65.1
Msa0716010 MtrunA17_Chr6g0482651 29.752 121 85 0 287 407 264 384 6.83e-11 65.1
Msa0716010 MtrunA17_Chr6g0473461 23.529 204 117 3 243 411 2 201 6.98e-11 62.4
Msa0716010 MtrunA17_Chr7g0214351 23.853 218 161 3 208 424 306 519 7.72e-11 65.5
Msa0716010 MtrunA17_Chr7g0233421 24.378 201 143 4 215 414 220 412 8.03e-11 65.1
Msa0716010 MtrunA17_Chr8g0381361 28.000 125 90 0 290 414 362 486 8.84e-11 64.7
Msa0716010 MtrunA17_Chr2g0306811 31.126 151 89 5 497 632 70 220 9.77e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0716010 AT5G66631.1 56.195 452 182 4 1 443 203 647 0.0 537
Msa0716010 AT5G66631.1 22.727 220 161 2 207 426 99 309 4.43e-11 66.6
Msa0716010 AT4G31850.1 26.216 473 301 13 1 450 179 626 9.30e-22 101
Msa0716010 AT2G33580.1 38.068 176 84 6 463 632 314 470 2.90e-20 95.9
Msa0716010 AT1G18900.3 24.231 260 193 1 163 422 314 569 8.94e-20 94.7
Msa0716010 AT1G18900.4 24.231 260 193 1 163 422 314 569 9.70e-20 94.4
Msa0716010 AT1G18900.2 24.231 260 193 1 163 422 314 569 9.70e-20 94.4
Msa0716010 AT1G18900.1 24.231 260 193 1 163 422 314 569 9.70e-20 94.4
Msa0716010 AT3G18110.1 26.577 222 160 1 208 429 362 580 1.19e-17 88.2
Msa0716010 AT3G18110.1 27.684 177 123 3 239 414 288 460 1.07e-12 72.0
Msa0716010 AT1G74750.2 23.488 281 209 2 146 424 290 566 2.15e-17 87.0
Msa0716010 AT1G74750.1 23.488 281 209 2 146 424 290 566 2.15e-17 87.0
Msa0716010 AT1G74750.4 23.488 281 209 2 146 424 290 566 2.15e-17 87.0
Msa0716010 AT1G74750.3 23.488 281 209 2 146 424 290 566 2.15e-17 87.0
Msa0716010 AT5G65560.1 24.528 265 170 6 148 411 72 307 9.13e-17 85.1
Msa0716010 AT5G65560.2 24.528 265 170 6 148 411 72 307 9.13e-17 85.1
Msa0716010 AT5G65560.3 24.528 265 170 6 148 411 72 307 9.13e-17 85.1
Msa0716010 AT3G22670.1 22.105 285 188 3 166 416 118 402 1.58e-16 83.6
Msa0716010 AT5G18390.1 24.370 238 176 2 170 406 67 301 1.77e-16 82.8
Msa0716010 AT5G06400.1 27.200 250 167 6 171 414 146 386 2.70e-16 83.6
Msa0716010 AT5G06400.1 20.982 448 328 11 1 435 459 893 7.60e-12 69.3
Msa0716010 AT2G31400.2 24.490 196 144 1 211 406 372 563 2.42e-15 80.5
Msa0716010 AT2G31400.1 24.490 196 144 1 211 406 372 563 2.95e-15 80.1
Msa0716010 AT5G61990.1 23.820 445 289 14 1 414 548 973 3.90e-15 79.7
Msa0716010 AT5G39710.1 27.717 184 129 2 208 391 270 449 4.09e-15 79.7
Msa0716010 AT5G39710.1 22.171 433 289 11 5 411 164 574 4.56e-13 72.8
Msa0716010 AT1G06710.7 23.226 465 308 12 4 438 269 714 1.08e-14 78.6
Msa0716010 AT1G06710.1 23.226 465 308 12 4 438 269 714 1.08e-14 78.6
Msa0716010 AT1G06710.9 23.226 465 308 12 4 438 269 714 1.08e-14 78.6
Msa0716010 AT1G06710.4 23.226 465 308 12 4 438 269 714 1.08e-14 78.6
Msa0716010 AT1G06710.13 23.226 465 308 12 4 438 269 714 1.08e-14 78.6
Msa0716010 AT1G06710.3 23.226 465 308 12 4 438 269 714 1.08e-14 78.6
Msa0716010 AT1G06710.8 23.226 465 308 12 4 438 269 714 1.08e-14 78.6
Msa0716010 AT1G06710.2 23.226 465 308 12 4 438 269 714 1.08e-14 78.6
Msa0716010 AT1G06710.19 23.226 465 308 12 4 438 269 714 1.08e-14 78.6
Msa0716010 AT1G06710.5 23.226 465 308 12 4 438 269 714 1.08e-14 78.6
Msa0716010 AT1G06710.6 23.226 465 308 12 4 438 269 714 1.08e-14 78.6
Msa0716010 AT1G06710.12 23.226 465 308 12 4 438 269 714 1.08e-14 78.6
Msa0716010 AT4G01400.1 25.751 233 162 2 183 411 54 279 1.46e-14 77.0
Msa0716010 AT4G01400.1 22.388 201 147 3 209 406 150 344 6.65e-11 65.5
Msa0716010 AT1G06710.15 23.226 465 308 12 4 438 269 714 1.47e-14 77.8
Msa0716010 AT1G06710.18 23.226 465 308 12 4 438 269 714 1.47e-14 77.8
Msa0716010 AT1G06710.17 23.226 465 308 12 4 438 269 714 1.47e-14 77.8
Msa0716010 AT1G06710.14 23.226 465 308 12 4 438 269 714 1.47e-14 77.8
Msa0716010 AT1G06710.16 23.226 465 308 12 4 438 269 714 1.47e-14 77.8
Msa0716010 AT1G06710.10 23.226 465 308 12 4 438 269 714 1.47e-14 77.8
Msa0716010 AT1G06710.11 23.226 465 308 12 4 438 269 714 1.47e-14 77.8
Msa0716010 AT1G12620.1 27.363 201 138 4 206 404 205 399 2.00e-14 77.0
Msa0716010 AT3G16010.1 26.984 252 176 4 163 411 76 322 2.01e-14 77.0
Msa0716010 AT3G16010.1 25.157 159 115 1 254 412 450 604 3.13e-11 67.0
Msa0716010 AT1G12775.1 27.451 204 140 4 206 407 221 418 3.17e-14 76.6
Msa0716010 AT1G12775.1 22.477 436 296 9 12 440 125 525 7.06e-11 65.9
Msa0716010 AT3G09060.2 22.177 248 190 1 179 426 9 253 3.52e-14 76.6
Msa0716010 AT3G09060.1 22.177 248 190 1 179 426 9 253 3.52e-14 76.6
Msa0716010 AT3G22470.2 29.000 200 138 2 208 407 205 400 3.80e-14 76.3
Msa0716010 AT3G22470.1 29.000 200 138 2 208 407 205 400 4.75e-14 75.9
Msa0716010 AT3G22470.1 29.508 122 86 0 290 411 318 439 9.76e-13 71.6
Msa0716010 AT2G32630.1 24.034 233 166 3 191 420 203 427 4.96e-14 75.9
Msa0716010 AT3G16890.1 22.146 438 297 13 1 414 241 658 5.44e-14 75.9
Msa0716010 AT3G16890.1 22.153 483 288 13 5 424 175 632 1.11e-11 68.6
Msa0716010 AT5G14820.1 23.013 239 175 5 169 405 149 380 5.47e-14 75.5
Msa0716010 AT3G62470.1 23.451 226 164 5 182 405 163 381 5.52e-14 75.5
Msa0716010 AT2G23770.1 38.136 118 65 3 515 632 343 452 6.05e-14 75.5
Msa0716010 AT3G16890.2 22.398 442 291 14 1 414 112 529 6.52e-14 75.1
Msa0716010 AT3G16890.2 22.153 483 288 13 5 424 46 503 1.45e-11 67.8
Msa0716010 AT3G21630.1 35.606 132 69 4 510 633 304 427 7.38e-14 75.5
Msa0716010 AT2G01390.1 21.226 212 163 1 178 389 87 294 9.52e-14 74.7
Msa0716010 AT3G62540.1 23.451 226 164 5 182 405 163 381 1.24e-13 74.7
Msa0716010 AT1G62590.2 28.218 202 141 2 206 407 218 415 1.33e-13 74.3
Msa0716010 AT1G62590.1 28.218 202 141 2 206 407 218 415 1.33e-13 74.3
Msa0716010 AT5G38730.1 23.438 256 168 7 179 412 44 293 1.35e-13 74.3
Msa0716010 AT5G38730.1 23.210 461 318 10 13 456 136 577 1.48e-11 67.8
Msa0716010 AT5G59900.1 22.944 462 269 13 13 411 159 596 1.39e-13 74.7
Msa0716010 AT1G62930.1 28.571 210 134 4 208 411 215 414 1.60e-13 74.3
Msa0716010 AT1G62930.1 27.481 131 95 0 290 420 433 563 1.10e-12 71.6
Msa0716010 AT4G20740.1 23.404 282 182 6 162 411 108 387 1.76e-13 74.3
Msa0716010 AT2G17140.1 24.303 251 176 5 182 424 5 249 1.88e-13 74.3
Msa0716010 AT2G17140.1 21.751 377 253 9 42 411 109 450 1.17e-12 71.6
Msa0716010 AT2G17140.2 24.303 251 176 5 182 424 5 249 1.88e-13 74.3
Msa0716010 AT2G17140.2 21.751 377 253 9 42 411 109 450 1.17e-12 71.6
Msa0716010 AT3G25210.1 23.171 246 159 3 187 414 82 315 1.97e-13 72.8
Msa0716010 AT1G74850.1 25.926 216 149 3 212 423 210 418 2.00e-13 74.3
Msa0716010 AT5G16420.1 23.656 279 162 5 178 411 43 315 2.53e-13 73.6
Msa0716010 AT5G16420.3 23.656 279 162 5 178 411 43 315 2.53e-13 73.6
Msa0716010 AT5G16420.4 23.656 279 162 5 178 411 43 315 2.53e-13 73.6
Msa0716010 AT5G16420.2 23.656 279 162 5 178 411 43 315 2.53e-13 73.6
Msa0716010 AT4G20140.1 39.370 127 63 4 521 633 944 1070 2.60e-13 73.9
Msa0716010 AT5G02860.1 21.887 265 163 5 195 423 191 447 2.82e-13 73.6
Msa0716010 AT5G02860.1 21.121 232 176 3 186 414 249 476 1.40e-11 68.2
Msa0716010 AT5G02860.4 21.887 265 163 5 195 423 191 447 2.82e-13 73.6
Msa0716010 AT5G02860.4 21.121 232 176 3 186 414 249 476 1.40e-11 68.2
Msa0716010 AT5G02860.2 21.887 265 163 5 195 423 191 447 2.82e-13 73.6
Msa0716010 AT5G02860.2 21.121 232 176 3 186 414 249 476 1.40e-11 68.2
Msa0716010 AT5G02860.5 21.887 265 163 5 195 423 191 447 2.82e-13 73.6
Msa0716010 AT5G02860.5 21.121 232 176 3 186 414 249 476 1.40e-11 68.2
Msa0716010 AT5G02860.3 21.887 265 163 5 195 423 191 447 2.82e-13 73.6
Msa0716010 AT5G02860.3 21.121 232 176 3 186 414 249 476 1.40e-11 68.2
Msa0716010 AT1G55630.1 22.222 216 161 2 202 414 243 454 3.28e-13 72.8
Msa0716010 AT1G77340.1 23.767 223 154 4 193 414 40 247 3.93e-13 72.0
Msa0716010 AT2G06000.1 24.000 225 162 3 192 414 82 299 4.33e-13 72.8
Msa0716010 AT2G06000.1 27.869 122 88 0 290 411 280 401 1.68e-11 67.8
Msa0716010 AT2G06000.2 24.000 225 162 3 192 414 82 299 4.33e-13 72.8
Msa0716010 AT2G06000.2 27.869 122 88 0 290 411 280 401 1.68e-11 67.8
Msa0716010 AT1G12700.3 28.462 130 93 0 287 416 349 478 8.71e-13 72.0
Msa0716010 AT1G12700.3 26.437 174 118 2 250 420 386 552 1.03e-11 68.6
Msa0716010 AT1G12700.2 28.462 130 93 0 287 416 349 478 8.71e-13 72.0
Msa0716010 AT1G12700.2 26.437 174 118 2 250 420 386 552 1.03e-11 68.6
Msa0716010 AT1G62910.1 28.774 212 135 4 206 411 216 417 9.11e-13 72.0
Msa0716010 AT1G12700.1 28.462 130 93 0 287 416 333 462 9.12e-13 71.6
Msa0716010 AT1G12700.1 25.806 217 149 4 208 420 328 536 9.41e-12 68.6
Msa0716010 AT1G30290.2 26.147 218 148 5 219 433 353 560 9.29e-13 72.0
Msa0716010 AT1G30290.1 26.147 218 148 5 219 433 353 560 9.84e-13 72.0
Msa0716010 AT3G53700.1 23.611 216 161 1 214 429 436 647 1.11e-12 71.6
Msa0716010 AT3G53700.1 27.869 122 88 0 290 411 333 454 7.75e-11 65.9
Msa0716010 AT3G53700.1 23.661 224 167 2 196 419 278 497 9.53e-11 65.5
Msa0716010 AT2G15630.1 22.333 403 277 11 9 393 224 608 1.18e-12 71.6
Msa0716010 AT1G62670.2 28.986 207 143 2 208 414 216 418 1.34e-12 71.2
Msa0716010 AT1G62670.2 25.954 131 97 0 290 420 434 564 3.51e-12 70.1
Msa0716010 AT1G62670.1 28.986 207 143 2 208 414 216 418 1.34e-12 71.2
Msa0716010 AT1G62670.1 25.954 131 97 0 290 420 434 564 3.51e-12 70.1
Msa0716010 AT1G63130.1 20.915 459 301 14 1 446 177 586 1.35e-12 71.2
Msa0716010 AT1G63130.2 20.915 459 301 14 1 446 177 586 1.35e-12 71.2
Msa0716010 AT5G61400.1 31.250 144 92 1 264 407 393 529 1.70e-12 70.9
Msa0716010 AT1G13040.2 21.446 415 253 11 1 412 140 484 1.95e-12 70.5
Msa0716010 AT1G13040.1 21.446 415 253 11 1 412 140 484 1.95e-12 70.5
Msa0716010 AT1G63330.3 28.218 202 141 2 206 407 143 340 2.35e-12 70.5
Msa0716010 AT1G63330.1 28.218 202 141 2 206 407 143 340 2.35e-12 70.5
Msa0716010 AT1G63330.2 28.218 202 141 2 206 407 143 340 2.35e-12 70.5
Msa0716010 AT1G02060.1 24.464 233 138 6 183 414 71 266 2.40e-12 70.5
Msa0716010 AT1G79490.1 28.824 170 113 2 250 417 315 478 3.10e-12 70.5
Msa0716010 AT1G05670.1 24.155 207 153 2 208 414 486 688 3.22e-12 70.1
Msa0716010 AT1G05670.1 31.092 119 82 0 288 406 352 470 1.41e-11 68.2
Msa0716010 AT1G05670.1 22.581 434 285 10 5 411 241 650 2.44e-11 67.4
Msa0716010 AT1G05670.1 28.346 127 91 0 289 415 318 444 3.79e-11 66.6
Msa0716010 AT1G05670.2 24.155 207 153 2 208 414 486 688 3.22e-12 70.1
Msa0716010 AT1G05670.2 31.092 119 82 0 288 406 352 470 1.41e-11 68.2
Msa0716010 AT1G05670.2 22.581 434 285 10 5 411 241 650 2.44e-11 67.4
Msa0716010 AT1G05670.2 28.346 127 91 0 289 415 318 444 3.79e-11 66.6
Msa0716010 AT1G05670.3 24.155 207 153 2 208 414 486 688 3.22e-12 70.1
Msa0716010 AT1G05670.3 31.092 119 82 0 288 406 352 470 1.41e-11 68.2
Msa0716010 AT1G05670.3 22.581 434 285 10 5 411 241 650 2.44e-11 67.4
Msa0716010 AT1G05670.3 28.346 127 91 0 289 415 318 444 3.79e-11 66.6
Msa0716010 AT1G71060.1 22.137 262 190 4 196 450 111 365 3.26e-12 69.7
Msa0716010 AT5G21222.1 19.804 409 288 8 11 414 320 693 4.25e-12 70.1
Msa0716010 AT5G21222.2 19.804 409 288 8 11 414 320 693 4.25e-12 70.1
Msa0716010 AT5G21222.4 19.804 409 288 8 11 414 320 693 4.25e-12 70.1
Msa0716010 AT5G21222.3 19.804 409 288 8 11 414 320 693 4.25e-12 70.1
Msa0716010 AT1G09820.1 24.138 261 158 6 182 406 194 450 4.26e-12 69.7
Msa0716010 AT1G09820.1 28.030 132 94 1 289 420 403 533 1.16e-11 68.2
Msa0716010 AT5G57250.1 24.786 234 168 4 184 417 182 407 4.67e-12 70.1
Msa0716010 AT3G60050.2 24.074 216 160 1 191 406 127 338 4.76e-12 69.3
Msa0716010 AT3G60050.2 23.744 219 154 3 202 414 240 451 4.81e-11 65.9
Msa0716010 AT3G60050.1 24.074 216 160 1 191 406 127 338 4.76e-12 69.3
Msa0716010 AT3G60050.1 23.744 219 154 3 202 414 240 451 4.81e-11 65.9
Msa0716010 AT1G09900.1 28.814 118 84 0 290 407 207 324 6.62e-12 68.9
Msa0716010 AT1G09900.1 28.931 159 105 4 253 411 143 293 3.15e-11 67.0
Msa0716010 AT5G65820.1 24.336 226 157 5 194 414 128 344 7.46e-12 68.9
Msa0716010 AT3G06920.2 21.053 285 194 4 163 416 62 346 8.20e-12 68.9
Msa0716010 AT3G06920.3 21.053 285 194 4 163 416 62 346 8.20e-12 68.9
Msa0716010 AT3G06920.1 21.053 285 194 4 163 416 48 332 8.36e-12 68.9
Msa0716010 AT1G63400.1 25.000 168 116 4 250 414 402 562 9.16e-12 68.6
Msa0716010 AT1G63400.1 25.837 209 145 2 206 411 218 419 9.79e-11 65.1
Msa0716010 AT3G04760.1 21.814 408 279 9 8 411 191 562 1.04e-11 68.6
Msa0716010 AT5G55840.2 25.664 226 154 4 196 407 93 318 1.70e-11 68.2
Msa0716010 AT5G55840.2 30.657 137 94 1 290 426 446 581 1.95e-11 68.2
Msa0716010 AT5G55840.1 25.664 226 154 4 196 407 93 318 1.70e-11 68.2
Msa0716010 AT5G55840.1 30.657 137 94 1 290 426 446 581 1.95e-11 68.2
Msa0716010 AT5G55840.3 25.664 226 154 4 196 407 53 278 1.71e-11 68.2
Msa0716010 AT5G55840.3 30.657 137 94 1 290 426 406 541 1.85e-11 68.2
Msa0716010 AT5G64320.1 30.709 127 84 1 288 414 253 375 1.89e-11 67.8
Msa0716010 AT1G09680.1 21.212 231 177 3 195 425 223 448 2.00e-11 67.4
Msa0716010 AT4G26800.1 30.508 118 82 0 290 407 86 203 2.47e-11 66.2
Msa0716010 AT4G26800.3 30.508 118 82 0 290 407 156 273 3.15e-11 66.2
Msa0716010 AT4G26800.2 30.508 118 82 0 290 407 231 348 3.73e-11 66.6
Msa0716010 AT5G01110.1 22.066 213 161 3 194 406 217 424 4.06e-11 66.6
Msa0716010 AT1G78940.1 32.812 128 67 4 516 632 365 484 4.17e-11 66.6
Msa0716010 AT5G16640.1 24.581 179 126 3 250 426 328 499 4.20e-11 66.2
Msa0716010 AT1G64580.1 29.134 127 90 0 290 416 292 418 4.47e-11 66.2
Msa0716010 AT2G07020.1 34.815 135 67 6 516 639 407 531 4.88e-11 66.2
Msa0716010 AT5G01110.2 22.066 213 161 3 194 406 245 452 4.88e-11 66.6
Msa0716010 AT1G64583.1 30.370 135 92 1 290 422 214 348 5.30e-11 65.9
Msa0716010 AT1G64583.2 30.370 135 92 1 290 422 189 323 5.73e-11 65.9
Msa0716010 AT5G18475.1 26.400 125 91 1 288 411 233 357 5.87e-11 65.9
Msa0716010 AT1G62914.1 25.854 205 142 2 206 407 211 408 6.23e-11 65.9
Msa0716010 AT1G03560.1 26.531 196 134 3 242 431 321 512 6.36e-11 65.9
Msa0716010 AT1G78940.3 32.812 128 67 4 516 632 436 555 6.46e-11 66.2
Msa0716010 AT1G78940.2 32.812 128 67 4 516 632 436 555 6.58e-11 65.9
Msa0716010 AT1G16760.2 31.250 128 69 4 516 632 438 557 7.66e-11 65.9
Msa0716010 AT1G17540.1 32.867 143 73 5 501 632 386 516 7.88e-11 65.9
Msa0716010 AT5G04810.1 26.190 168 120 2 245 412 586 749 8.38e-11 65.9
Msa0716010 AT1G63320.1 25.758 132 89 1 290 412 19 150 8.43e-11 62.0
Msa0716010 AT1G16760.1 31.250 128 69 4 516 632 438 557 8.92e-11 65.5
Msa0716010 AT5G04810.2 26.220 164 117 2 249 412 590 749 9.00e-11 65.5

Find 132 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAAATGTTTGGATATC+TGG 0.170597 5_1:-9327295 None:intergenic
GCAAGATACTTAGAAGTTTC+AGG 0.242330 5_1:+9326888 Msa0716010:CDS
CAAAATCTGGCTCTTATAAT+TGG 0.262266 5_1:+9329212 Msa0716010:CDS
TTTGAAGATATGAAGAATTC+TGG 0.266472 5_1:+9327475 Msa0716010:CDS
GTCTATGAGTATGCTGAAAA+TGG 0.278284 5_1:+9329614 Msa0716010:CDS
GAAGATGGTTGAACAAGTTT+TGG 0.284314 5_1:-9329167 Msa0716020:three_prime_UTR
AAAGTCAATGATTAACCTTA+TGG 0.297432 5_1:-9327086 None:intergenic
TTGGCTGGATCCGCGGTCTT+TGG 0.315039 5_1:+9326784 Msa0716010:CDS
CTGCATGGAATTTCTTCTGC+TGG 0.322708 5_1:+9326921 Msa0716010:CDS
ACCCTTGTTAGTTCAAAGTT+TGG 0.344284 5_1:+9329056 Msa0716010:CDS
GTTAATGAGATGCAAGTTGA+TGG 0.346251 5_1:+9326539 Msa0716010:CDS
TCACAATGTGATCATGTAGA+TGG 0.351608 5_1:+9326746 Msa0716010:CDS
TGGCTAGTGCCTTACAGAAT+TGG 0.353434 5_1:+9326804 Msa0716010:CDS
GCATTAGACCTGAAAATGTT+TGG 0.360031 5_1:-9327303 None:intergenic
ATGTCTCTGTGGATTATTCT+TGG 0.369404 5_1:-9329763 Msa0716020:three_prime_UTR
TTCGGTTCTAATTGAAGGTT+TGG 0.375503 5_1:+9326481 Msa0716010:CDS
AACTCTTTGATGGCCGAATC+AGG 0.382129 5_1:-9327505 None:intergenic
AGTAAAATGTTTGATGAAGT+TGG 0.386223 5_1:+9326509 Msa0716010:CDS
CAAGCCAACAATGTATGAAA+TGG 0.386975 5_1:+9329382 Msa0716010:CDS
ACGTACTTTGAAACAGTATT+CGG 0.388885 5_1:+9326463 Msa0716010:CDS
TGGAAATCTTGTGAAACTAA+TGG 0.394475 5_1:+9329556 Msa0716010:CDS
TACGTCCATGTCGCGCTAGA+AGG 0.402460 5_1:-9327000 None:intergenic
CTTCACTAGCAACTCTTTGA+TGG 0.403178 5_1:-9327515 None:intergenic
GAAGGATGAAGGATTTCTTA+AGG 0.405813 5_1:+9326604 Msa0716010:CDS
TTCTGGTTCCATACCTGATT+CGG 0.410204 5_1:+9327492 Msa0716010:CDS
CAGTATTCGGTTCTAATTGA+AGG 0.419628 5_1:+9326476 Msa0716010:CDS
TGCTGGGTTGCTGATCAACC+TGG 0.420026 5_1:+9326938 Msa0716010:CDS
ACTTACAATAACCTTCTATC+AGG 0.420198 5_1:-9327423 None:intergenic
GTCCTTCCACTTGCATTACC+TGG 0.422582 5_1:+9327607 Msa0716010:CDS
TTGCATTACCTGGTCATGTA+TGG 0.429367 5_1:+9327617 Msa0716010:CDS
GCCAGACGCGTATCTGTATA+AGG 0.430893 5_1:+9327399 Msa0716010:CDS
ATCGGAATTCCTTCCACACT+TGG 0.431442 5_1:-9327230 None:intergenic
ATGCTATAACTTCTACAATT+CGG 0.431640 5_1:-9326359 None:intergenic
AACAATGATCGAATACTTTG+TGG 0.433378 5_1:+9327151 Msa0716010:CDS
CTTGTTCAACCATCTTCAAA+TGG 0.436465 5_1:+9329173 Msa0716010:CDS
CAACAAGAGCTGCACTGGCT+TGG 0.436660 5_1:+9327446 Msa0716010:CDS
ACTTGAAGAGTGGTTGTTCT+CGG 0.440441 5_1:+9329640 Msa0716010:CDS
CTGAAAATGTTTGGATATCT+GGG 0.442804 5_1:-9327294 None:intergenic
AAGAAATTCCATGCAGTATC+CGG 0.442847 5_1:-9326914 None:intergenic
ACACTCTTGATTCTTTCATC+CGG 0.443612 5_1:-9326656 None:intergenic
GTTTACAAGGCTAATATAGA+TGG 0.444846 5_1:+9329461 Msa0716010:CDS
TGCATGGAATTTCTTCTGCT+GGG 0.445487 5_1:+9326922 Msa0716010:CDS
ACATCCATTTCATACATTGT+TGG 0.446716 5_1:-9329386 Msa0716020:three_prime_UTR
GATTCACTTAAAACCTTGGC+TGG 0.457260 5_1:+9326769 Msa0716010:CDS
TTGCAGCAGGTGAAGGATGA+AGG 0.460732 5_1:+9326593 Msa0716010:CDS
CATCTTGAAGATCAGAATAG+AGG 0.461168 5_1:+9327042 Msa0716010:CDS
GGAAATCTTGTGAAACTAAT+GGG 0.462411 5_1:+9329557 Msa0716010:CDS
CACTCTTGATTCTTTCATCC+GGG 0.466810 5_1:-9326655 None:intergenic
CTGTATAAGGTCCTGATAGA+AGG 0.471205 5_1:+9327412 Msa0716010:CDS
GGTGAGTTTGTTATTGCAGC+AGG 0.472558 5_1:+9326580 Msa0716010:CDS
ACTCGGTGGTTTCGCTTACA+TGG 0.474294 5_1:+9329681 Msa0716010:CDS
AGTTGCTAGTGAAGAGCCTC+TGG 0.476859 5_1:+9327524 Msa0716010:CDS
TCATCTCATCAAGCATGTCC+AGG 0.481198 5_1:-9327255 None:intergenic
GTGAAGAGCCTCTGGAAAGA+AGG 0.484880 5_1:+9327532 Msa0716010:CDS
TGAAGGATTTCTTAAGGATG+TGG 0.487856 5_1:+9326610 Msa0716010:CDS
TTGAACACCTTGTGAAATGT+AGG 0.489597 5_1:+9326387 Msa0716010:CDS
TAAGTCAACAAGAGCTGCAC+TGG 0.490541 5_1:+9327441 Msa0716010:CDS
GTAGCCATGGATGTTGCAAT+TGG 0.493603 5_1:+9329719 Msa0716010:CDS
ATTAACCTTATGGTTCTGAA+TGG 0.498328 5_1:-9327076 None:intergenic
CAAAGTTTGTGTGGACAACT+AGG 0.503840 5_1:+9326858 Msa0716010:CDS
GATTGGTGAATCAGTTTACA+AGG 0.505991 5_1:+9329448 Msa0716010:CDS
CTGAGTGAGAATTGTAAGAT+TGG 0.506708 5_1:+9329431 Msa0716010:CDS
ATCAAGCATGTCCAGGGTAT+CGG 0.509612 5_1:-9327248 None:intergenic
ACAATGATCGAATACTTTGT+GGG 0.511017 5_1:+9327152 Msa0716010:CDS
CACCAAACTTTGAACTAACA+AGG 0.512914 5_1:-9329058 Msa0716020:three_prime_UTR
ATCAGGACTCCAATTCTGTA+AGG 0.515595 5_1:-9326813 None:intergenic
TTAATTTGTTGCCTTTGATG+AGG 0.518040 5_1:+9326435 Msa0716010:CDS
GTTCTAATTGAAGGTTTGGT+TGG 0.519428 5_1:+9326485 Msa0716010:CDS
ATGGGATTCACTTAAAACCT+TGG 0.520730 5_1:+9326765 Msa0716010:CDS
ACCTTATACAGATACGCGTC+TGG 0.524198 5_1:-9327400 None:intergenic
CAGACCAATTGCAACATCCA+TGG 0.524233 5_1:-9329723 Msa0716020:three_prime_UTR
GTATGAAATGGATGTGATCA+TGG 0.524330 5_1:+9329394 Msa0716010:CDS
TTTGATGGCCGAATCAGGTA+TGG 0.524348 5_1:-9327500 None:intergenic
ATGTGGATGAATTGTTTGAA+GGG 0.525014 5_1:+9326627 Msa0716010:CDS
AAATGCTGATGCTGCTCTGA+AGG 0.525513 5_1:+9327123 Msa0716010:CDS
ACTTAGAAGTTTCAGGTCAC+CGG 0.527754 5_1:+9326895 Msa0716010:CDS
GATGTGGATGAATTGTTTGA+AGG 0.528226 5_1:+9326626 Msa0716010:CDS
CACAATGTGATCATGTAGAT+GGG 0.532033 5_1:+9326747 Msa0716010:CDS
TCTAGTGCTGATACCTCATC+AGG 0.535975 5_1:-9326830 None:intergenic
GGTTAATGTTCTTAAAAGAG+AGG 0.546099 5_1:-9327209 None:intergenic
TAAGATGGTTGATGATGGGT+CGG 0.549361 5_1:+9326334 None:intergenic
TTCTATTGATAGCAGTGATG+AGG 0.550194 5_1:+9326685 Msa0716010:CDS
TTAAGAACATTAACCAAGTG+TGG 0.552345 5_1:+9327217 Msa0716010:CDS
ATCTTTGAAAACTTCAAACT+CGG 0.553009 5_1:+9329664 Msa0716010:CDS
GAACATTAACCAAGTGTGGA+AGG 0.555715 5_1:+9327221 Msa0716010:CDS
ATGACCCTTCTAGCGCGACA+TGG 0.556861 5_1:+9326995 Msa0716010:CDS
TTAGTTTCACAAGATTTCCA+TGG 0.557743 5_1:-9329553 Msa0716020:three_prime_UTR
ACGTCCATGTCGCGCTAGAA+GGG 0.559332 5_1:-9326999 None:intergenic
GCCTCTGGAAAGAAGGTAGA+CGG 0.559458 5_1:+9327539 Msa0716010:CDS
GATGAGAATGAGGACGAGGG+TGG 0.559684 5_1:+9326707 Msa0716010:CDS
GTTTGTGTGGACAACTAGGT+TGG 0.566053 5_1:+9326862 Msa0716010:CDS
ATCTTGAAGATCAGAATAGA+GGG 0.566478 5_1:+9327043 Msa0716010:CDS
GAAAGAAGGTAGACGGAGAG+AGG 0.569327 5_1:+9327546 Msa0716010:CDS
TATATATTATGAGTAAATCC+AGG 0.571391 5_1:-9326956 None:intergenic
CAGTGATGAGGATGAGAATG+AGG 0.572880 5_1:+9326697 Msa0716010:CDS
TCCGTCTACCTTCTTTCCAG+AGG 0.577819 5_1:-9327540 None:intergenic
TCAGAGAATAACCGTAGCCA+TGG 0.580704 5_1:+9329706 Msa0716010:CDS
TGATGAGGTATCAGCACTAG+AGG 0.580742 5_1:+9326832 Msa0716010:CDS
TTTGTTATTGCAGCAGGTGA+AGG 0.584701 5_1:+9326586 Msa0716010:CDS
GACTACCATTCAGAACCATA+AGG 0.587707 5_1:+9327071 Msa0716010:CDS
GTACGTTTAATCCTCATCAA+AGG 0.587810 5_1:-9326446 None:intergenic
TAAAACCTTGGCTGGATCCG+CGG 0.590765 5_1:+9326777 Msa0716010:CDS
CTGACAGTCCATACATGACC+AGG 0.594467 5_1:-9327625 None:intergenic
TGGAAGGAATTCCGATACCC+TGG 0.598845 5_1:+9327237 Msa0716010:CDS
CATTGAAAAGAGTTTCTGCA+CGG 0.599322 5_1:-9327356 None:intergenic
TGAGGATGAGAATGAGGACG+AGG 0.601840 5_1:+9326703 Msa0716010:CDS
AATTGCAACATCCATGGCTA+CGG 0.601871 5_1:-9329717 Msa0716020:three_prime_UTR
TTTGAAAACTTCAAACTCGG+TGG 0.605841 5_1:+9329667 Msa0716010:CDS
AAAGACCGCGGATCCAGCCA+AGG 0.608186 5_1:-9326782 None:intergenic
TCAGGTCACCGGATACTGCA+TGG 0.610625 5_1:+9326906 Msa0716010:CDS
AGGGATCAAAACTGAACGGT+CGG 0.610669 5_1:-9329132 Msa0716020:three_prime_UTR
ATTGTTTGAAGGGATTTGCC+CGG 0.613868 5_1:+9326637 Msa0716010:CDS
AACAAACTCACCGTTCGACT+AGG 0.617703 5_1:-9326569 None:intergenic
CATCTCATCAAGCATGTCCA+GGG 0.618669 5_1:-9327254 None:intergenic
TAGAGGGTGCAAAGTTTGTG+TGG 0.619451 5_1:+9326849 Msa0716010:CDS
ACATGACCAGGTAATGCAAG+TGG 0.620837 5_1:-9327613 None:intergenic
GCAGCTCTCTTCAACAGCTG+CGG 0.624107 5_1:-9327569 None:intergenic
TGGAATATTACCTAGTCGAA+CGG 0.624584 5_1:+9326559 Msa0716010:CDS
ACAGAATTGGAGTCCTGATG+AGG 0.639931 5_1:+9326817 Msa0716010:CDS
GACCAGGTAATGCAAGTGGA+AGG 0.640755 5_1:-9327609 None:intergenic
GAGCTGCGAGGAAGTAAATG+TGG 0.649634 5_1:+9327585 Msa0716010:CDS
GATGAGGTATCAGCACTAGA+GGG 0.650518 5_1:+9326833 Msa0716010:CDS
GGTGTGTCTTCTGACAATGA+TGG 0.650870 5_1:+9329578 Msa0716010:CDS
ACCAAACTTTGAACTAACAA+GGG 0.655493 5_1:-9329057 Msa0716020:three_prime_UTR
GAAATGGATGTGATCATGGA+AGG 0.661178 5_1:+9329398 Msa0716010:CDS
ATTCTGCAGAAGGTAAACCA+TGG 0.662360 5_1:+9329536 Msa0716010:CDS
AAAACTTCCTACATTTCACA+AGG 0.664952 5_1:-9326394 None:intergenic
GAGGATGAGAATGAGGACGA+GGG 0.684142 5_1:+9326704 Msa0716010:CDS
TCACAGGGATCAAAACTGAA+CGG 0.686313 5_1:-9329136 Msa0716020:three_prime_UTR
AAAATGGATCACTTGAAGAG+TGG 0.692384 5_1:+9329630 Msa0716010:CDS
AGCTGTTGAAGAGAGCTGCG+AGG 0.717575 5_1:+9327573 Msa0716010:CDS
AAGGCACTAGCCAAAGACCG+CGG 0.751118 5_1:-9326794 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATTGCATATATATAA+TGG + chr5_1:9328671-9328690 Msa0716010:intron 10.0%
!! ATGCAATTATAATATAATAC+AGG - chr5_1:9328663-9328682 None:intergenic 15.0%
!! TATATATTATGAGTAAATCC+AGG - chr5_1:9326959-9326978 None:intergenic 20.0%
!!! TTCAAATAGTTTAGTTTCAA+AGG + chr5_1:9327681-9327700 Msa0716010:intron 20.0%
!!! TCAAATAGTTTAGTTTCAAA+GGG + chr5_1:9327682-9327701 Msa0716010:intron 20.0%
!!! CTTAAACTGTGATTTATTTT+GGG + chr5_1:9327802-9327821 Msa0716010:intron 20.0%
!!! CTTTTTGTAAGAAAATTAGA+AGG - chr5_1:9328099-9328118 None:intergenic 20.0%
!!! AATTTTCTTACAAAAAGAGT+TGG + chr5_1:9328102-9328121 Msa0716010:intron 20.0%
!!! TTTTTTTTTGTTGGTGTAAA+AGG + chr5_1:9328178-9328197 Msa0716010:intron 20.0%
!!! TTTTTTTTGTTGGTGTAAAA+GGG + chr5_1:9328179-9328198 Msa0716010:intron 20.0%
!! TAAAGATGGTAAGAATAATA+TGG - chr5_1:9328837-9328856 None:intergenic 20.0%
! ATGCTATAACTTCTACAATT+CGG - chr5_1:9326362-9326381 None:intergenic 25.0%
! AGTAAAATGTTTGATGAAGT+TGG + chr5_1:9326509-9326528 Msa0716010:CDS 25.0%
! AAAGTCAATGATTAACCTTA+TGG - chr5_1:9327089-9327108 None:intergenic 25.0%
!!! AGGTTAATCATTGACTTTTA+TGG + chr5_1:9327091-9327110 Msa0716010:CDS 25.0%
!!! GGTTAATCATTGACTTTTAT+GGG + chr5_1:9327092-9327111 Msa0716010:CDS 25.0%
!! CTTGATGAGATGATTTTAAA+TGG + chr5_1:9327265-9327284 Msa0716010:CDS 25.0%
! TTTGAAGATATGAAGAATTC+TGG + chr5_1:9327475-9327494 Msa0716010:CDS 25.0%
! CCAAAATAAATCACAGTTTA+AGG - chr5_1:9327804-9327823 None:intergenic 25.0%
!! CCTTAAACTGTGATTTATTT+TGG + chr5_1:9327801-9327820 Msa0716010:intron 25.0%
!!! GAGTTTTGAGAATGTATTAT+TGG + chr5_1:9327863-9327882 Msa0716010:intron 25.0%
! TTGCACAATCATATAATGAA+TGG + chr5_1:9327978-9327997 Msa0716010:intron 25.0%
!!! GTTCCTCTTTTTTTTTTTGT+TGG + chr5_1:9328169-9328188 Msa0716010:intron 25.0%
! ACACCAACAAAAAAAAAAAG+AGG - chr5_1:9328175-9328194 None:intergenic 25.0%
! TTAACACCGTTATATTCTTA+TGG + chr5_1:9328282-9328301 Msa0716010:intron 25.0%
! ATTCTGCCATAAGAATATAA+CGG - chr5_1:9328291-9328310 None:intergenic 25.0%
! TATTATTTGTTCCCTATTTC+TGG - chr5_1:9328560-9328579 None:intergenic 25.0%
! TATATTGAAACCTATGTAAC+TGG + chr5_1:9328609-9328628 Msa0716010:intron 25.0%
! TATGGTTTAACGTTTAACAA+AGG - chr5_1:9328703-9328722 None:intergenic 25.0%
! TATGGTATTATAACCCAATT+TGG - chr5_1:9328819-9328838 None:intergenic 25.0%
!! TGTTCAATTGATTCTTTGAA+GGG - chr5_1:9328986-9329005 None:intergenic 25.0%
!! TTGTTCAATTGATTCTTTGA+AGG - chr5_1:9328987-9329006 None:intergenic 25.0%
! TCAAAGAATCAATTGAACAA+AGG + chr5_1:9328987-9329006 Msa0716010:intron 25.0%
! AGTATCTTATTACTTATGTG+TGG + chr5_1:9329015-9329034 Msa0716010:intron 25.0%
! AAATGAAAAAAGCAATTCCT+AGG - chr5_1:9329244-9329263 Msa0716020:three_prime_UTR 25.0%
!! ATCTTTGAAAACTTCAAACT+CGG + chr5_1:9329664-9329683 Msa0716010:CDS 25.0%
AAAACTTCCTACATTTCACA+AGG - chr5_1:9326397-9326416 None:intergenic 30.0%
! TGTGAAATGTAGGAAGTTTT+TGG + chr5_1:9326397-9326416 Msa0716010:CDS 30.0%
!! TTAATTTGTTGCCTTTGATG+AGG + chr5_1:9326435-9326454 Msa0716010:CDS 30.0%
!! ACGTACTTTGAAACAGTATT+CGG + chr5_1:9326463-9326482 Msa0716010:CDS 30.0%
ATGTGGATGAATTGTTTGAA+GGG + chr5_1:9326627-9326646 Msa0716010:CDS 30.0%
ATCTTGAAGATCAGAATAGA+GGG + chr5_1:9327043-9327062 Msa0716010:CDS 30.0%
!! ATTAACCTTATGGTTCTGAA+TGG - chr5_1:9327079-9327098 None:intergenic 30.0%
AACAATGATCGAATACTTTG+TGG + chr5_1:9327151-9327170 Msa0716010:CDS 30.0%
ACAATGATCGAATACTTTGT+GGG + chr5_1:9327152-9327171 Msa0716010:CDS 30.0%
GGTTAATGTTCTTAAAAGAG+AGG - chr5_1:9327212-9327231 None:intergenic 30.0%
TTAAGAACATTAACCAAGTG+TGG + chr5_1:9327217-9327236 Msa0716010:CDS 30.0%
CTGAAAATGTTTGGATATCT+GGG - chr5_1:9327297-9327316 None:intergenic 30.0%
! ATGCAGTATTTTTCACAACT+TGG + chr5_1:9327322-9327341 Msa0716010:CDS 30.0%
ACTTACAATAACCTTCTATC+AGG - chr5_1:9327426-9327445 None:intergenic 30.0%
AAATCACAGTTTAAGGAACT+TGG - chr5_1:9327797-9327816 None:intergenic 30.0%
!!! AAACTGTGATTTATTTTGGG+AGG + chr5_1:9327805-9327824 Msa0716010:intron 30.0%
!!! AACTGTGATTTATTTTGGGA+GGG + chr5_1:9327806-9327825 Msa0716010:intron 30.0%
! TACTGCACCTTAAAACTTTT+TGG - chr5_1:9327836-9327855 None:intergenic 30.0%
TTTGAGAATGTATTATTGGC+AGG + chr5_1:9327867-9327886 Msa0716010:intron 30.0%
TCATATAATGAATGGACCTT+TGG + chr5_1:9327986-9328005 Msa0716010:intron 30.0%
TGAATATTAATCCCTCGAAT+AGG + chr5_1:9328220-9328239 Msa0716010:intron 30.0%
GAATATTAATCCCTCGAATA+GGG + chr5_1:9328221-9328240 Msa0716010:intron 30.0%
!!! CTTTTTTTTAGGCATAGCAT+GGG - chr5_1:9328355-9328374 None:intergenic 30.0%
!!! ACTTTTTTTTAGGCATAGCA+TGG - chr5_1:9328356-9328375 None:intergenic 30.0%
TATTAGATGTCAAGCTTATG+TGG + chr5_1:9328497-9328516 Msa0716010:intron 30.0%
TGCCTTTACCAAAATGTTAA+GGG - chr5_1:9328742-9328761 None:intergenic 30.0%
ATGCCTTTACCAAAATGTTA+AGG - chr5_1:9328743-9328762 None:intergenic 30.0%
TGCGCAGAATATAATAAAGA+TGG - chr5_1:9328851-9328870 None:intergenic 30.0%
GCATGATTTCATACTTGTTT+GGG + chr5_1:9328868-9328887 Msa0716010:intron 30.0%
TTTCAAATCTTAGACACTGT+TGG - chr5_1:9328899-9328918 None:intergenic 30.0%
ACCAAACTTTGAACTAACAA+GGG - chr5_1:9329060-9329079 Msa0716020:three_prime_UTR 30.0%
! TTTTCAGCTAACATTTCAAC+TGG - chr5_1:9329089-9329108 Msa0716020:three_prime_UTR 30.0%
! CTTTTTCTTCCATTTGAAGA+TGG - chr5_1:9329185-9329204 Msa0716020:three_prime_UTR 30.0%
!! CAAAATCTGGCTCTTATAAT+TGG + chr5_1:9329212-9329231 Msa0716010:CDS 30.0%
! CTTATAATTGGTATTAGCCT+AGG + chr5_1:9329224-9329243 Msa0716010:intron 30.0%
ACATCCATTTCATACATTGT+TGG - chr5_1:9329389-9329408 Msa0716020:three_prime_UTR 30.0%
GTTTACAAGGCTAATATAGA+TGG + chr5_1:9329461-9329480 Msa0716010:CDS 30.0%
AATCAAAAAAGATGCTTCTG+AGG + chr5_1:9329505-9329524 Msa0716010:CDS 30.0%
TTAGTTTCACAAGATTTCCA+TGG - chr5_1:9329556-9329575 Msa0716020:three_prime_UTR 30.0%
TGGAAATCTTGTGAAACTAA+TGG + chr5_1:9329556-9329575 Msa0716010:CDS 30.0%
GGAAATCTTGTGAAACTAAT+GGG + chr5_1:9329557-9329576 Msa0716010:CDS 30.0%
!! CAATGATGGAAACTATTTTC+TGG + chr5_1:9329592-9329611 Msa0716010:CDS 30.0%
TTGAACACCTTGTGAAATGT+AGG + chr5_1:9326387-9326406 Msa0716010:CDS 35.0%
!! GAAGTTTTTGGAAGCTATTG+AGG + chr5_1:9326409-9326428 Msa0716010:CDS 35.0%
GTACGTTTAATCCTCATCAA+AGG - chr5_1:9326449-9326468 None:intergenic 35.0%
! CAGTATTCGGTTCTAATTGA+AGG + chr5_1:9326476-9326495 Msa0716010:CDS 35.0%
! TTCGGTTCTAATTGAAGGTT+TGG + chr5_1:9326481-9326500 Msa0716010:CDS 35.0%
! GTTCTAATTGAAGGTTTGGT+TGG + chr5_1:9326485-9326504 Msa0716010:CDS 35.0%
! GTTAATGAGATGCAAGTTGA+TGG + chr5_1:9326539-9326558 Msa0716010:CDS 35.0%
TGGAATATTACCTAGTCGAA+CGG + chr5_1:9326559-9326578 Msa0716010:CDS 35.0%
GAAGGATGAAGGATTTCTTA+AGG + chr5_1:9326604-9326623 Msa0716010:CDS 35.0%
TGAAGGATTTCTTAAGGATG+TGG + chr5_1:9326610-9326629 Msa0716010:CDS 35.0%
GATGTGGATGAATTGTTTGA+AGG + chr5_1:9326626-9326645 Msa0716010:CDS 35.0%
ACACTCTTGATTCTTTCATC+CGG - chr5_1:9326659-9326678 None:intergenic 35.0%
! TTCTATTGATAGCAGTGATG+AGG + chr5_1:9326685-9326704 Msa0716010:CDS 35.0%
TCACAATGTGATCATGTAGA+TGG + chr5_1:9326746-9326765 Msa0716010:CDS 35.0%
CACAATGTGATCATGTAGAT+GGG + chr5_1:9326747-9326766 Msa0716010:CDS 35.0%
ATGGGATTCACTTAAAACCT+TGG + chr5_1:9326765-9326784 Msa0716010:CDS 35.0%
GCAAGATACTTAGAAGTTTC+AGG + chr5_1:9326888-9326907 Msa0716010:CDS 35.0%
AAGAAATTCCATGCAGTATC+CGG - chr5_1:9326917-9326936 None:intergenic 35.0%
CATCTTGAAGATCAGAATAG+AGG + chr5_1:9327042-9327061 Msa0716010:CDS 35.0%
CCTGAAAATGTTTGGATATC+TGG - chr5_1:9327298-9327317 None:intergenic 35.0%
! CCAGATATCCAAACATTTTC+AGG + chr5_1:9327295-9327314 Msa0716010:CDS 35.0%
GCATTAGACCTGAAAATGTT+TGG - chr5_1:9327306-9327325 None:intergenic 35.0%
CATTGAAAAGAGTTTCTGCA+CGG - chr5_1:9327359-9327378 None:intergenic 35.0%
TTGTGCTTAGATTTCATGCA+TGG - chr5_1:9327752-9327771 None:intergenic 35.0%
TCTAAGCACAAAGTAACAAG+CGG + chr5_1:9327761-9327780 Msa0716010:intron 35.0%
!!! ACTGTGATTTATTTTGGGAG+GGG + chr5_1:9327807-9327826 Msa0716010:intron 35.0%
GATCCTTCATTGTATTCACT+TGG + chr5_1:9327935-9327954 Msa0716010:intron 35.0%
TGACCAAGTGAATACAATGA+AGG - chr5_1:9327941-9327960 None:intergenic 35.0%
!! TTACTTCTAGCTTAACCAGT+GGG - chr5_1:9328325-9328344 None:intergenic 35.0%
!!! GACATGGGTCACTTTTTTTT+AGG - chr5_1:9328366-9328385 None:intergenic 35.0%
ACGATTGAATGAGATGACAT+GGG - chr5_1:9328381-9328400 None:intergenic 35.0%
AACGATTGAATGAGATGACA+TGG - chr5_1:9328382-9328401 None:intergenic 35.0%
TCATCTCATTCAATCGTTCT+TGG + chr5_1:9328384-9328403 Msa0716010:intron 35.0%
!!! AATCGTTCTTGGCTTGTTTT+CGG + chr5_1:9328395-9328414 Msa0716010:intron 35.0%
AAAAAGCTAGACTCAAGCAA+AGG + chr5_1:9328438-9328457 Msa0716010:intron 35.0%
! TTTCTGGTACATAGCTACTT+CGG - chr5_1:9328544-9328563 None:intergenic 35.0%
AGTAGCTATGTACCAGAAAT+AGG + chr5_1:9328545-9328564 Msa0716010:intron 35.0%
GTAGCTATGTACCAGAAATA+GGG + chr5_1:9328546-9328565 Msa0716010:intron 35.0%
! TTGTTTGCCCCTTAACATTT+TGG + chr5_1:9328731-9328750 Msa0716010:intron 35.0%
GCCTTTACCAAAATGTTAAG+GGG - chr5_1:9328741-9328760 None:intergenic 35.0%
CATCAAGTTAGATGGTCATT+AGG + chr5_1:9328760-9328779 Msa0716010:intron 35.0%
CGCATGATTTCATACTTGTT+TGG + chr5_1:9328867-9328886 Msa0716010:intron 35.0%
TCTTATTACTTATGTGTGGC+AGG + chr5_1:9329019-9329038 Msa0716010:intron 35.0%
ACCCTTGTTAGTTCAAAGTT+TGG + chr5_1:9329056-9329075 Msa0716010:CDS 35.0%
CACCAAACTTTGAACTAACA+AGG - chr5_1:9329061-9329080 Msa0716020:three_prime_UTR 35.0%
!! GTTTTGGTAAACTTGTCACA+GGG - chr5_1:9329154-9329173 Msa0716020:three_prime_UTR 35.0%
!! AGTTTTGGTAAACTTGTCAC+AGG - chr5_1:9329155-9329174 Msa0716020:three_prime_UTR 35.0%
! GAAGATGGTTGAACAAGTTT+TGG - chr5_1:9329170-9329189 Msa0716020:three_prime_UTR 35.0%
CTTGTTCAACCATCTTCAAA+TGG + chr5_1:9329173-9329192 Msa0716010:CDS 35.0%
AAAAAGCAGCAGTCAAAATC+TGG + chr5_1:9329199-9329218 Msa0716010:CDS 35.0%
CAATATACGTACACAAGTGA+TGG - chr5_1:9329278-9329297 Msa0716020:three_prime_UTR 35.0%
AAGTAACTTATCTGCAGTCT+CGG - chr5_1:9329339-9329358 Msa0716020:three_prime_UTR 35.0%
! ACTGCAGATAAGTTACTTTG+AGG + chr5_1:9329341-9329360 Msa0716010:intron 35.0%
!! AAGTTACTTTGAGGTGTTTC+AGG + chr5_1:9329350-9329369 Msa0716010:intron 35.0%
CAAGCCAACAATGTATGAAA+TGG + chr5_1:9329382-9329401 Msa0716010:CDS 35.0%
GTATGAAATGGATGTGATCA+TGG + chr5_1:9329394-9329413 Msa0716010:CDS 35.0%
CTGAGTGAGAATTGTAAGAT+TGG + chr5_1:9329431-9329450 Msa0716010:CDS 35.0%
GATTGGTGAATCAGTTTACA+AGG + chr5_1:9329448-9329467 Msa0716010:CDS 35.0%
GTCTATGAGTATGCTGAAAA+TGG + chr5_1:9329614-9329633 Msa0716010:CDS 35.0%
AAAATGGATCACTTGAAGAG+TGG + chr5_1:9329630-9329649 Msa0716010:CDS 35.0%
TTTGAAAACTTCAAACTCGG+TGG + chr5_1:9329667-9329686 Msa0716010:CDS 35.0%
!! TTTGTTATTGCAGCAGGTGA+AGG + chr5_1:9326586-9326605 Msa0716010:CDS 40.0%
ATTGTTTGAAGGGATTTGCC+CGG + chr5_1:9326637-9326656 Msa0716010:CDS 40.0%
CACTCTTGATTCTTTCATCC+GGG - chr5_1:9326658-9326677 None:intergenic 40.0%
GATTCACTTAAAACCTTGGC+TGG + chr5_1:9326769-9326788 Msa0716010:CDS 40.0%
ATCAGGACTCCAATTCTGTA+AGG - chr5_1:9326816-9326835 None:intergenic 40.0%
CAAAGTTTGTGTGGACAACT+AGG + chr5_1:9326858-9326877 Msa0716010:CDS 40.0%
! ACTTAGAAGTTTCAGGTCAC+CGG + chr5_1:9326895-9326914 Msa0716010:CDS 40.0%
TGCATGGAATTTCTTCTGCT+GGG + chr5_1:9326922-9326941 Msa0716010:CDS 40.0%
GACTACCATTCAGAACCATA+AGG + chr5_1:9327071-9327090 Msa0716010:CDS 40.0%
GAACATTAACCAAGTGTGGA+AGG + chr5_1:9327221-9327240 Msa0716010:CDS 40.0%
! CGTGCAGAAACTCTTTTCAA+TGG + chr5_1:9327357-9327376 Msa0716010:CDS 40.0%
! TTTTCAATGGTCAGACAGAG+CGG + chr5_1:9327370-9327389 Msa0716010:CDS 40.0%
CTGTATAAGGTCCTGATAGA+AGG + chr5_1:9327412-9327431 Msa0716010:CDS 40.0%
!! TTCTGGTTCCATACCTGATT+CGG + chr5_1:9327492-9327511 Msa0716010:CDS 40.0%
CTTCACTAGCAACTCTTTGA+TGG - chr5_1:9327518-9327537 None:intergenic 40.0%
TTGCATTACCTGGTCATGTA+TGG + chr5_1:9327617-9327636 Msa0716010:CDS 40.0%
ATAGCCCAATGGATAACTCT+AGG - chr5_1:9327710-9327729 None:intergenic 40.0%
TCCATTGGGCTATATGATAG+AGG + chr5_1:9327717-9327736 Msa0716010:intron 40.0%
ACCTCTATCATATAGCCCAA+TGG - chr5_1:9327721-9327740 None:intergenic 40.0%
! GGGGTTGCCAAAAAGTTTTA+AGG + chr5_1:9327826-9327845 Msa0716010:intron 40.0%
! GGAATTAGCTCTTGTTCTGA+TGG + chr5_1:9327907-9327926 Msa0716010:intron 40.0%
ATTAATCCCTCGAATAGGGT+TGG + chr5_1:9328225-9328244 Msa0716010:intron 40.0%
TGTTATCCAACCCTATTCGA+GGG - chr5_1:9328234-9328253 None:intergenic 40.0%
ATGTTATCCAACCCTATTCG+AGG - chr5_1:9328235-9328254 None:intergenic 40.0%
!! CTTACTTCTAGCTTAACCAG+TGG - chr5_1:9328326-9328345 None:intergenic 40.0%
CAAAGGAGAGTAGGTAAGAA+GGG + chr5_1:9328455-9328474 Msa0716010:intron 40.0%
GTTGACACTTCCAGTTACAT+AGG - chr5_1:9328622-9328641 None:intergenic 40.0%
GGGCAAACAAGCAAAAGATA+TGG - chr5_1:9328721-9328740 None:intergenic 40.0%
!! GCCCCTTAACATTTTGGTAA+AGG + chr5_1:9328737-9328756 Msa0716010:intron 40.0%
!! GGTAAAGGCATCAAGTTAGA+TGG + chr5_1:9328752-9328771 Msa0716010:intron 40.0%
ATCGTGTATGGACACCAAAT+TGG + chr5_1:9328802-9328821 Msa0716010:intron 40.0%
TCGTGTATGGACACCAAATT+GGG + chr5_1:9328803-9328822 Msa0716010:intron 40.0%
TCACAGGGATCAAAACTGAA+CGG - chr5_1:9329139-9329158 Msa0716020:three_prime_UTR 40.0%
GAAATGGATGTGATCATGGA+AGG + chr5_1:9329398-9329417 Msa0716010:CDS 40.0%
GGAGCTAAAAATTCTGCAGA+AGG + chr5_1:9329526-9329545 Msa0716010:CDS 40.0%
ATTCTGCAGAAGGTAAACCA+TGG + chr5_1:9329536-9329555 Msa0716010:CDS 40.0%
ACTTGAAGAGTGGTTGTTCT+CGG + chr5_1:9329640-9329659 Msa0716010:CDS 40.0%
AATTGCAACATCCATGGCTA+CGG - chr5_1:9329720-9329739 Msa0716020:three_prime_UTR 40.0%
AACAAACTCACCGTTCGACT+AGG - chr5_1:9326572-9326591 None:intergenic 45.0%
!! GGTGAGTTTGTTATTGCAGC+AGG + chr5_1:9326580-9326599 Msa0716010:CDS 45.0%
CAGTGATGAGGATGAGAATG+AGG + chr5_1:9326697-9326716 Msa0716010:CDS 45.0%
TGGCTAGTGCCTTACAGAAT+TGG + chr5_1:9326804-9326823 Msa0716010:CDS 45.0%
ACAGAATTGGAGTCCTGATG+AGG + chr5_1:9326817-9326836 Msa0716010:CDS 45.0%
!! TCTAGTGCTGATACCTCATC+AGG - chr5_1:9326833-9326852 None:intergenic 45.0%
! TGATGAGGTATCAGCACTAG+AGG + chr5_1:9326832-9326851 Msa0716010:CDS 45.0%
! GATGAGGTATCAGCACTAGA+GGG + chr5_1:9326833-9326852 Msa0716010:CDS 45.0%
! TAGAGGGTGCAAAGTTTGTG+TGG + chr5_1:9326849-9326868 Msa0716010:CDS 45.0%
GTTTGTGTGGACAACTAGGT+TGG + chr5_1:9326862-9326881 Msa0716010:CDS 45.0%
CTGCATGGAATTTCTTCTGC+TGG + chr5_1:9326921-9326940 Msa0716010:CDS 45.0%
AAATGCTGATGCTGCTCTGA+AGG + chr5_1:9327123-9327142 Msa0716010:CDS 45.0%
ATCGGAATTCCTTCCACACT+TGG - chr5_1:9327233-9327252 None:intergenic 45.0%
ATCAAGCATGTCCAGGGTAT+CGG - chr5_1:9327251-9327270 None:intergenic 45.0%
CATCTCATCAAGCATGTCCA+GGG - chr5_1:9327257-9327276 None:intergenic 45.0%
TCATCTCATCAAGCATGTCC+AGG - chr5_1:9327258-9327277 None:intergenic 45.0%
ACCTTATACAGATACGCGTC+TGG - chr5_1:9327403-9327422 None:intergenic 45.0%
TAAGTCAACAAGAGCTGCAC+TGG + chr5_1:9327441-9327460 Msa0716010:CDS 45.0%
! TTTGATGGCCGAATCAGGTA+TGG - chr5_1:9327503-9327522 None:intergenic 45.0%
! AACTCTTTGATGGCCGAATC+AGG - chr5_1:9327508-9327527 None:intergenic 45.0%
ACATGACCAGGTAATGCAAG+TGG - chr5_1:9327616-9327635 None:intergenic 45.0%
GGTGCCTAGAGTTATCCATT+GGG + chr5_1:9327703-9327722 Msa0716010:intron 45.0%
GCTCTCAACACATCAACCAA+AGG - chr5_1:9328005-9328024 None:intergenic 45.0%
TGCTGTCTTCTGCAACTTGA+GGG + chr5_1:9328039-9328058 Msa0716010:intron 45.0%
AGACTCAAGCAAAGGAGAGT+AGG + chr5_1:9328446-9328465 Msa0716010:intron 45.0%
GCAAAGGAGAGTAGGTAAGA+AGG + chr5_1:9328454-9328473 Msa0716010:intron 45.0%
AGGGATCAAAACTGAACGGT+CGG - chr5_1:9329135-9329154 Msa0716020:three_prime_UTR 45.0%
GGTGTGTCTTCTGACAATGA+TGG + chr5_1:9329578-9329597 Msa0716010:CDS 45.0%
TCAGAGAATAACCGTAGCCA+TGG + chr5_1:9329706-9329725 Msa0716010:CDS 45.0%
GTAGCCATGGATGTTGCAAT+TGG + chr5_1:9329719-9329738 Msa0716010:CDS 45.0%
CAGACCAATTGCAACATCCA+TGG - chr5_1:9329726-9329745 Msa0716020:three_prime_UTR 45.0%
TTGCAGCAGGTGAAGGATGA+AGG + chr5_1:9326593-9326612 Msa0716010:CDS 50.0%
TGAGGATGAGAATGAGGACG+AGG + chr5_1:9326703-9326722 Msa0716010:CDS 50.0%
GAGGATGAGAATGAGGACGA+GGG + chr5_1:9326704-9326723 Msa0716010:CDS 50.0%
TAAAACCTTGGCTGGATCCG+CGG + chr5_1:9326777-9326796 Msa0716010:CDS 50.0%
TGGAAGGAATTCCGATACCC+TGG + chr5_1:9327237-9327256 Msa0716010:CDS 50.0%
GCCAGACGCGTATCTGTATA+AGG + chr5_1:9327399-9327418 Msa0716010:CDS 50.0%
AGTTGCTAGTGAAGAGCCTC+TGG + chr5_1:9327524-9327543 Msa0716010:CDS 50.0%
! GTGAAGAGCCTCTGGAAAGA+AGG + chr5_1:9327532-9327551 Msa0716010:CDS 50.0%
! GCCTCTGGAAAGAAGGTAGA+CGG + chr5_1:9327539-9327558 Msa0716010:CDS 50.0%
TCCGTCTACCTTCTTTCCAG+AGG - chr5_1:9327543-9327562 None:intergenic 50.0%
GAAAGAAGGTAGACGGAGAG+AGG + chr5_1:9327546-9327565 Msa0716010:CDS 50.0%
GAGCTGCGAGGAAGTAAATG+TGG + chr5_1:9327585-9327604 Msa0716010:CDS 50.0%
GTCCTTCCACTTGCATTACC+TGG + chr5_1:9327607-9327626 Msa0716010:CDS 50.0%
GACCAGGTAATGCAAGTGGA+AGG - chr5_1:9327612-9327631 None:intergenic 50.0%
CTGACAGTCCATACATGACC+AGG - chr5_1:9327628-9327647 None:intergenic 50.0%
GGGTGCCTAGAGTTATCCAT+TGG + chr5_1:9327702-9327721 Msa0716010:intron 50.0%
!! CAGGACATGAGTTGATGCTC+AGG + chr5_1:9327886-9327905 Msa0716010:intron 50.0%
CAAGTTGCAGAAGACAGCAG+AGG - chr5_1:9328038-9328057 None:intergenic 50.0%
CTGCTGTCTTCTGCAACTTG+AGG + chr5_1:9328038-9328057 Msa0716010:intron 50.0%
GCTGTCTTCTGCAACTTGAG+GGG + chr5_1:9328040-9328059 Msa0716010:intron 50.0%
GAATTCGAACTCGAACCCAC+TGG + chr5_1:9328307-9328326 Msa0716010:intron 50.0%
CATACACGATGTCAGCTAGC+TGG - chr5_1:9328792-9328811 None:intergenic 50.0%
CAGCTAGCTGACATCGTGTA+TGG + chr5_1:9328790-9328809 Msa0716010:intron 50.0%
! ACTCGGTGGTTTCGCTTACA+TGG + chr5_1:9329681-9329700 Msa0716010:CDS 50.0%
GATGAGAATGAGGACGAGGG+TGG + chr5_1:9326707-9326726 Msa0716010:CDS 55.0%
! AAGGCACTAGCCAAAGACCG+CGG - chr5_1:9326797-9326816 None:intergenic 55.0%
TCAGGTCACCGGATACTGCA+TGG + chr5_1:9326906-9326925 Msa0716010:CDS 55.0%
TGCTGGGTTGCTGATCAACC+TGG + chr5_1:9326938-9326957 Msa0716010:CDS 55.0%
ATGACCCTTCTAGCGCGACA+TGG + chr5_1:9326995-9327014 Msa0716010:CDS 55.0%
ACGTCCATGTCGCGCTAGAA+GGG - chr5_1:9327002-9327021 None:intergenic 55.0%
TACGTCCATGTCGCGCTAGA+AGG - chr5_1:9327003-9327022 None:intergenic 55.0%
!! CAACAAGAGCTGCACTGGCT+TGG + chr5_1:9327446-9327465 Msa0716010:CDS 55.0%
GCAGCTCTCTTCAACAGCTG+CGG - chr5_1:9327572-9327591 None:intergenic 55.0%
AGCTGTTGAAGAGAGCTGCG+AGG + chr5_1:9327573-9327592 Msa0716010:CDS 55.0%
AAAGACCGCGGATCCAGCCA+AGG - chr5_1:9326785-9326804 None:intergenic 60.0%
TTGGCTGGATCCGCGGTCTT+TGG + chr5_1:9326784-9326803 Msa0716010:CDS 60.0%
CACGATGTCAGCTAGCTGGC+TGG - chr5_1:9328788-9328807 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 9326338 9329772 9326338 ID=Msa0716010;Name=Msa0716010
chr5_1 mRNA 9326338 9329772 9326338 ID=Msa0716010-mRNA-1;Parent=Msa0716010;Name=Msa0716010-mRNA-1;_AED=0.08;_eAED=0.10;_QI=0|0|0|1|1|1|3|0|640
chr5_1 exon 9326338 9327666 9326338 ID=Msa0716010-mRNA-1:exon:3752;Parent=Msa0716010-mRNA-1
chr5_1 exon 9329041 9329233 9329041 ID=Msa0716010-mRNA-1:exon:3753;Parent=Msa0716010-mRNA-1
chr5_1 exon 9329372 9329772 9329372 ID=Msa0716010-mRNA-1:exon:3754;Parent=Msa0716010-mRNA-1
chr5_1 CDS 9326338 9327666 9326338 ID=Msa0716010-mRNA-1:cds;Parent=Msa0716010-mRNA-1
chr5_1 CDS 9329041 9329233 9329041 ID=Msa0716010-mRNA-1:cds;Parent=Msa0716010-mRNA-1
chr5_1 CDS 9329372 9329772 9329372 ID=Msa0716010-mRNA-1:cds;Parent=Msa0716010-mRNA-1
Gene Sequence

>Msa0716010

ATGGTTGATGATGGGTCGGTTCCGAATTGTAGAAGTTATAGCATAATAATTGAACACCTTGTGAAATGTAGGAAGTTTTTGGAAGCTATTGAGGTTTTTAATTTGTTGCCTTTGATGAGGATTAAACGTACTTTGAAACAGTATTCGGTTCTAATTGAAGGTTTGGTTGGTAGTAAAATGTTTGATGAAGTTGGAGTTTTAGTTAATGAGATGCAAGTTGATGGAATATTACCTAGTCGAACGGTGAGTTTGTTATTGCAGCAGGTGAAGGATGAAGGATTTCTTAAGGATGTGGATGAATTGTTTGAAGGGATTTGCCCGGATGAAAGAATCAAGAGTGTAAGTTTTTCTATTGATAGCAGTGATGAGGATGAGAATGAGGACGAGGGTGGAAATGAGAATGAAGTTTCACAATGTGATCATGTAGATGGGATTCACTTAAAACCTTGGCTGGATCCGCGGTCTTTGGCTAGTGCCTTACAGAATTGGAGTCCTGATGAGGTATCAGCACTAGAGGGTGCAAAGTTTGTGTGGACAACTAGGTTGGTATGCAAGATACTTAGAAGTTTCAGGTCACCGGATACTGCATGGAATTTCTTCTGCTGGGTTGCTGATCAACCTGGATTTACTCATAATATATACACAGTGCAAAGAATCATGACCCTTCTAGCGCGACATGGACGTACTGAATTAGTTGATAGACTCATCTTGAAGATCAGAATAGAGGGAATGAGACTACCATTCAGAACCATAAGGTTAATCATTGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTCTGAAGGTTTTCAACAATGATCGAATACTTTGTGGGTCTATATCAAAAGTTAACTTGATGCTTCTGTATTCCTCTCTTTTAAGAACATTAACCAAGTGTGGAAGGAATTCCGATACCCTGGACATGCTTGATGAGATGATTTTAAATGGCATTTGCCCAGATATCCAAACATTTTCAGGTCTAATGCAGTATTTTTCACAACTTGGAGACATTAAAACCGTGCAGAAACTCTTTTCAATGGTCAGACAGAGCGGTTTCGAGCCAGACGCGTATCTGTATAAGGTCCTGATAGAAGGTTATTGTAAGTCAACAAGAGCTGCACTGGCTTGGAGACTATTTGAAGATATGAAGAATTCTGGTTCCATACCTGATTCGGCCATCAAAGAGTTGCTAGTGAAGAGCCTCTGGAAAGAAGGTAGACGGAGAGAGGCCGCAGCTGTTGAAGAGAGCTGCGAGGAAGTAAATGTGGTCCTTCCACTTGCATTACCTGGTCATGTATGGACTGTCAGCTCTGCAGATCTCACAAAAGATAACGACAATGTTACCCTTGTTAGTTCAAAGTTTGGTGCATCACCAGTTGAAATGTTAGCTGAAAACAATCATAACTTCACTGCTTCAACCGACCGTTCAGTTTTGATCCCTGTGACAAGTTTACCAAAACTTGTTCAACCATCTTCAAATGGAAGAAAAAGCAGCAGTCAAAATCTGGCTCTTATAATTGGTTATGTAAGCAAGCCAACAATGTATGAAATGGATGTGATCATGGAAGGTACAATGAATCTGAGTGAGAATTGTAAGATTGGTGAATCAGTTTACAAGGCTAATATAGATGGTAGAGTTTTAGCAGTGAAAAAAATCAAAAAAGATGCTTCTGAGGAGCTAAAAATTCTGCAGAAGGTAAACCATGGAAATCTTGTGAAACTAATGGGTGTGTCTTCTGACAATGATGGAAACTATTTTCTGGTCTATGAGTATGCTGAAAATGGATCACTTGAAGAGTGGTTGTTCTCGGAATCTTTGAAAACTTCAAACTCGGTGGTTTCGCTTACATGGTCTCAGAGAATAACCGTAGCCATGGATGTTGCAATTGGTCTGCAAATGAACATACTTATCCAAGAATAA
Protein sequence

>Msa0716010

MVDDGSVPNCRSYSIIIEHLVKCRKFLEAIEVFNLLPLMRIKRTLKQYSVLIEGLVGSKMFDEVGVLVNEMQVDGILPSRTVSLLLQQVKDEGFLKDVDELFEGICPDERIKSVSFSIDSSDEDENEDEGGNENEVSQCDHVDGIHLKPWLDPRSLASALQNWSPDEVSALEGAKFVWTTRLVCKILRSFRSPDTAWNFFCWVADQPGFTHNIYTVQRIMTLLARHGRTELVDRLILKIRIEGMRLPFRTIRLIIDFYGISKNADAALKVFNNDRILCGSISKVNLMLLYSSLLRTLTKCGRNSDTLDMLDEMILNGICPDIQTFSGLMQYFSQLGDIKTVQKLFSMVRQSGFEPDAYLYKVLIEGYCKSTRAALAWRLFEDMKNSGSIPDSAIKELLVKSLWKEGRRREAAAVEESCEEVNVVLPLALPGHVWTVSSADLTKDNDNVTLVSSKFGASPVEMLAENNHNFTASTDRSVLIPVTSLPKLVQPSSNGRKSSSQNLALIIGYVSKPTMYEMDVIMEGTMNLSENCKIGESVYKANIDGRVLAVKKIKKDASEELKILQKVNHGNLVKLMGVSSDNDGNYFLVYEYAENGSLEEWLFSESLKTSNSVVSLTWSQRITVAMDVAIGLQMNILIQE*