Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719150 | XP_003612622.1 | 89.728 | 331 | 26 | 2 | 1 | 330 | 1 | 324 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719150 | sp|Q6AWY4|GRF5_ORYSJ | 36.364 | 330 | 153 | 8 | 17 | 316 | 25 | 327 | 1.17e-46 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719150 | G7K6W0 | 89.728 | 331 | 26 | 2 | 1 | 330 | 1 | 324 | 0.0 | 577 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0719150 | TF | GRF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719150 | MtrunA17_Chr5g0409471 | 89.728 | 331 | 26 | 2 | 1 | 330 | 1 | 324 | 0.0 | 577 |
| Msa0719150 | MtrunA17_Chr4g0021261 | 47.706 | 218 | 64 | 9 | 16 | 212 | 25 | 213 | 3.86e-49 | 167 |
| Msa0719150 | MtrunA17_Chr4g0070591 | 34.276 | 283 | 135 | 8 | 16 | 259 | 9 | 279 | 3.56e-41 | 147 |
| Msa0719150 | MtrunA17_Chr2g0300511 | 60.177 | 113 | 29 | 2 | 16 | 112 | 7 | 119 | 1.80e-40 | 145 |
| Msa0719150 | MtrunA17_Chr8g0343881 | 58.333 | 108 | 33 | 2 | 17 | 112 | 12 | 119 | 3.30e-39 | 141 |
| Msa0719150 | MtrunA17_Chr1g0152191 | 56.897 | 116 | 34 | 2 | 16 | 115 | 144 | 259 | 9.63e-37 | 139 |
| Msa0719150 | MtrunA17_Chr7g0265931 | 62.037 | 108 | 29 | 4 | 17 | 112 | 79 | 186 | 1.12e-35 | 133 |
| Msa0719150 | MtrunA17_Chr3g0127641 | 53.000 | 100 | 39 | 2 | 14 | 112 | 110 | 202 | 5.63e-27 | 110 |
| Msa0719150 | MtrunA17_Chr8g0351521 | 47.619 | 105 | 43 | 2 | 15 | 114 | 53 | 150 | 8.53e-20 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719150 | AT3G13960.1 | 57.273 | 110 | 35 | 2 | 15 | 112 | 15 | 124 | 1.32e-38 | 141 |
| Msa0719150 | AT4G37740.1 | 48.649 | 148 | 62 | 3 | 16 | 153 | 164 | 307 | 1.10e-37 | 141 |
| Msa0719150 | AT3G52910.1 | 56.250 | 112 | 33 | 3 | 17 | 112 | 83 | 194 | 2.55e-33 | 127 |
| Msa0719150 | AT2G36400.1 | 54.783 | 115 | 37 | 3 | 17 | 116 | 77 | 191 | 4.11e-33 | 126 |
| Msa0719150 | AT2G22840.1 | 54.128 | 109 | 36 | 2 | 16 | 112 | 133 | 239 | 7.20e-31 | 122 |
| Msa0719150 | AT2G06200.2 | 50.400 | 125 | 39 | 3 | 9 | 110 | 38 | 162 | 1.71e-30 | 117 |
| Msa0719150 | AT2G06200.1 | 52.066 | 121 | 35 | 3 | 13 | 110 | 3 | 123 | 2.78e-30 | 115 |
| Msa0719150 | AT4G24150.3 | 46.610 | 118 | 47 | 2 | 17 | 118 | 112 | 229 | 3.86e-24 | 102 |
| Msa0719150 | AT4G24150.2 | 46.610 | 118 | 47 | 2 | 17 | 118 | 150 | 267 | 8.63e-24 | 101 |
| Msa0719150 | AT5G53660.1 | 49.485 | 97 | 44 | 1 | 16 | 112 | 59 | 150 | 1.10e-22 | 97.4 |
| Msa0719150 | AT4G24150.1 | 37.762 | 143 | 48 | 1 | 17 | 118 | 150 | 292 | 2.01e-21 | 95.1 |
| Msa0719150 | AT2G45480.2 | 39.815 | 108 | 51 | 2 | 15 | 109 | 23 | 129 | 6.17e-17 | 80.5 |
| Msa0719150 | AT2G06200.3 | 72.917 | 48 | 11 | 1 | 65 | 110 | 4 | 51 | 6.33e-17 | 77.8 |
| Msa0719150 | AT2G45480.1 | 39.815 | 108 | 51 | 2 | 15 | 109 | 21 | 127 | 1.87e-16 | 80.1 |
| Msa0719150 | AT2G45480.1 | 36.458 | 96 | 48 | 3 | 21 | 116 | 269 | 351 | 1.12e-12 | 68.9 |
| Msa0719150 | AT2G45480.3 | 39.815 | 108 | 51 | 2 | 15 | 109 | 23 | 129 | 1.92e-16 | 80.1 |
| Msa0719150 | AT2G45480.3 | 36.458 | 96 | 48 | 3 | 21 | 116 | 271 | 353 | 1.17e-12 | 68.9 |
Find 111 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTATGCTTCTTCCTCTTC+AGG | 0.174652 | 5_1:+14166319 | Msa0719150:CDS |
| CTTCTACACCTACCTGGTTC+TGG | 0.179105 | 5_1:-14165972 | None:intergenic |
| GAAGGTTTAAGTTTCAATTT+TGG | 0.205836 | 5_1:+14166275 | Msa0719150:CDS |
| GGCTCAACTGGTTTCCTCTA+AGG | 0.291080 | 5_1:+14165481 | Msa0719150:five_prime_UTR |
| AATGCAACAAATCAAGAAAA+AGG | 0.318694 | 5_1:-14168738 | None:intergenic |
| AAGGAATTGGTGGTGAATTA+AGG | 0.321303 | 5_1:-14165441 | None:intergenic |
| TTTGTTTCAGTGGGTTATTA+TGG | 0.331715 | 5_1:+14165936 | Msa0719150:intron |
| TTCTACACCTACCTGGTTCT+GGG | 0.343240 | 5_1:-14165971 | None:intergenic |
| GTTGAGCCATCATTGGTAAA+TGG | 0.346399 | 5_1:-14165466 | None:intergenic |
| GGTGAGGGAGGAGGAAAGGG+TGG | 0.357595 | 5_1:-14165512 | None:intergenic |
| GGGTGGGGAGCTTACCTTAG+AGG | 0.358982 | 5_1:-14165495 | None:intergenic |
| TTCCTAGATCCTTCTGTAAG+AGG | 0.359958 | 5_1:-14168209 | None:intergenic |
| CCTATGCTTCTTCCTCTTCA+GGG | 0.369011 | 5_1:+14166320 | Msa0719150:CDS |
| GGTTGTGGTGGTGGTGAGGG+AGG | 0.375922 | 5_1:-14165524 | None:intergenic |
| TTGGTAAATGGAAAAGGAAT+TGG | 0.377079 | 5_1:-14165454 | None:intergenic |
| GATGTTCTAGCTCTTGCCAT+TGG | 0.387285 | 5_1:-14165735 | None:intergenic |
| TTTACCAATGATGGCTCAAC+TGG | 0.388761 | 5_1:+14165469 | Msa0719150:five_prime_UTR |
| GAGAGAAGAGACGGTGGTTG+TGG | 0.392939 | 5_1:-14165539 | None:intergenic |
| TTTCAATCAACATTGACATC+TGG | 0.399287 | 5_1:-14168552 | None:intergenic |
| CCTGTTTCAAGCTACCTAAC+TGG | 0.407084 | 5_1:-14168428 | None:intergenic |
| TGAGGGAGGAGGAAAGGGTG+GGG | 0.407542 | 5_1:-14165510 | None:intergenic |
| GGTGGTGAGGGAGGAGGAAA+GGG | 0.410748 | 5_1:-14165515 | None:intergenic |
| CAGGTTCTCTTGTTCGCTGT+TGG | 0.415451 | 5_1:-14168356 | None:intergenic |
| ATGTTCTAGCTCTTGCCATT+GGG | 0.417081 | 5_1:-14165734 | None:intergenic |
| CTCTCTTCAGTGACTGGCAG+TGG | 0.424103 | 5_1:+14168469 | Msa0719150:CDS |
| GGTGGTTGTGGTGGTGGTGA+GGG | 0.429607 | 5_1:-14165527 | None:intergenic |
| ATCGTCTTTAACGGCCAGTT+AGG | 0.430343 | 5_1:+14168414 | Msa0719150:CDS |
| CGGTGGTTGTGGTGGTGGTG+AGG | 0.431472 | 5_1:-14165528 | None:intergenic |
| CCAGTTAGGTAGCTTGAAAC+AGG | 0.432238 | 5_1:+14168428 | Msa0719150:CDS |
| AGGGTTCTAAGAAACCTTAT+AGG | 0.432493 | 5_1:+14166339 | Msa0719150:CDS |
| TGATGTTGACAAAACTTCAT+AGG | 0.435078 | 5_1:-14168614 | None:intergenic |
| CTCAGTCTCTCTTCAGTGAC+TGG | 0.441726 | 5_1:+14168463 | Msa0719150:CDS |
| ACACTTCCTTTGCATACAAA+TGG | 0.444626 | 5_1:+14166245 | Msa0719150:CDS |
| TCCAAGGAAATCGTCTTTAA+CGG | 0.448844 | 5_1:+14168405 | Msa0719150:CDS |
| CTTGGTGCTGGTGGTTCTAG+TGG | 0.451681 | 5_1:+14166176 | Msa0719150:CDS |
| GTGAGGGAGGAGGAAAGGGT+GGG | 0.452048 | 5_1:-14165511 | None:intergenic |
| CGGTCACAGTACTTAGAATC+AGG | 0.455848 | 5_1:-14166035 | None:intergenic |
| TGGTGGTGAGGGAGGAGGAA+AGG | 0.456820 | 5_1:-14165516 | None:intergenic |
| TGTGGTGGTGGTGAGGGAGG+AGG | 0.467729 | 5_1:-14165521 | None:intergenic |
| AGAGACGGTGGTTGTGGTGG+TGG | 0.472006 | 5_1:-14165533 | None:intergenic |
| GCCGTTAAAGACGATTTCCT+TGG | 0.472384 | 5_1:-14168406 | None:intergenic |
| CAAACACTGTTTCAGAATCA+AGG | 0.474671 | 5_1:+14168301 | Msa0719150:CDS |
| ATCTTCAAGTATCTGAAAGC+TGG | 0.478992 | 5_1:+14165766 | Msa0719150:CDS |
| CCATCATTGGTAAATGGAAA+AGG | 0.481551 | 5_1:-14165460 | None:intergenic |
| CCTCCTCTGCAATGGAGTAC+AGG | 0.482812 | 5_1:+14168505 | Msa0719150:CDS |
| CGAATAGGTAAAAGGAGGTC+AGG | 0.485852 | 5_1:-14165802 | None:intergenic |
| CATAGGGTCCATGTGGGGTA+TGG | 0.486854 | 5_1:-14166303 | None:intergenic |
| TTGGTGTTAAAATCCTTGCT+TGG | 0.489894 | 5_1:-14168528 | None:intergenic |
| ATCAACATTGACATCTGGAT+TGG | 0.498766 | 5_1:-14168547 | None:intergenic |
| AACCTCTTACAGAAGGATCT+AGG | 0.500686 | 5_1:+14168207 | Msa0719150:CDS |
| TATAGAGAGAGAAGAGACGG+TGG | 0.509826 | 5_1:-14165545 | None:intergenic |
| GAAACCAGTTGAGCCATCAT+TGG | 0.510967 | 5_1:-14165473 | None:intergenic |
| CTAGGAACTGTGAAGTATCA+AGG | 0.513671 | 5_1:+14168225 | Msa0719150:CDS |
| GATTATAGAGAGAGAAGAGA+CGG | 0.515038 | 5_1:-14165548 | None:intergenic |
| ATTCCACAGGCTTTCTTGAA+CGG | 0.519412 | 5_1:-14166079 | None:intergenic |
| CCCTGAAGAGGAAGAAGCAT+AGG | 0.524973 | 5_1:-14166320 | None:intergenic |
| GCGTCGAGGTTAAACAGCTC+AGG | 0.529759 | 5_1:-14168375 | None:intergenic |
| ACTTCACAGCAACTTGGTGC+TGG | 0.533655 | 5_1:+14166164 | Msa0719150:CDS |
| CATACAAATGGTACTCGTGA+AGG | 0.534280 | 5_1:+14166257 | Msa0719150:CDS |
| GGTTATGACTTCACTTCAGA+TGG | 0.536609 | 5_1:+14168246 | Msa0719150:CDS |
| CCTGTACTCCATTGCAGAGG+AGG | 0.538667 | 5_1:-14168505 | None:intergenic |
| TCTGTTCTTCTACACCTACC+TGG | 0.541473 | 5_1:-14165978 | None:intergenic |
| CGAGTACCATTTGTATGCAA+AGG | 0.542113 | 5_1:-14166251 | None:intergenic |
| TCACAGCAACTTGGTGCTGG+TGG | 0.545124 | 5_1:+14166167 | Msa0719150:CDS |
| TAATAGGTTTGGACTGAACT+CGG | 0.548879 | 5_1:+14168170 | Msa0719150:intron |
| ACAGTAGGAAAATTGAAGCT+TGG | 0.552947 | 5_1:-14168648 | None:intergenic |
| AGTACTACTTCACAGCAACT+TGG | 0.553505 | 5_1:+14166158 | Msa0719150:CDS |
| CTTATGATTGTTAAGACACA+TGG | 0.554162 | 5_1:+14168796 | Msa0719150:three_prime_UTR |
| AGATTTAGCCTCCTCTGCAA+TGG | 0.559132 | 5_1:+14168497 | Msa0719150:CDS |
| TTCAACAACCGCCGTTGATG+TGG | 0.565403 | 5_1:+14165683 | Msa0719150:CDS |
| TGGGAACACCATACCCCACA+TGG | 0.566300 | 5_1:+14166295 | Msa0719150:CDS |
| AGAAGAGACGGTGGTTGTGG+TGG | 0.566603 | 5_1:-14165536 | None:intergenic |
| TGCCATTGGGAGACTGTGAA+CGG | 0.571539 | 5_1:-14165721 | None:intergenic |
| TGTTTAACCTCGACGCTGCA+AGG | 0.571608 | 5_1:+14168382 | Msa0719150:CDS |
| AGAAGGATTGAATCTAGAAG+AGG | 0.581729 | 5_1:-14165596 | None:intergenic |
| GATGATGATGAAGATGAAGA+AGG | 0.582694 | 5_1:-14165613 | None:intergenic |
| CCTCGACGCTGCAAGGTCCA+AGG | 0.583292 | 5_1:+14168389 | Msa0719150:CDS |
| TCCTCCTTCAAGTGAACAGT+AGG | 0.584623 | 5_1:-14168663 | None:intergenic |
| ACTGTTTCAGAATCAAGGAA+TGG | 0.590210 | 5_1:+14168306 | Msa0719150:CDS |
| TCCTACTGTTCACTTGAAGG+AGG | 0.592033 | 5_1:+14168662 | Msa0719150:three_prime_UTR |
| GAAGAAGAAGAAGATTCCAC+AGG | 0.592735 | 5_1:-14166092 | None:intergenic |
| GTAAATGGAAAAGGAATTGG+TGG | 0.593460 | 5_1:-14165451 | None:intergenic |
| CCTTGGACCTTGCAGCGTCG+AGG | 0.593781 | 5_1:-14168389 | None:intergenic |
| TGGACTGAACTCGGAAGCAG+AGG | 0.606816 | 5_1:+14168179 | Msa0719150:CDS |
| AGTCACTGAAGAGAGACTGA+GGG | 0.611044 | 5_1:-14168461 | None:intergenic |
| CACCGTTCACAGTCTCCCAA+TGG | 0.611493 | 5_1:+14165719 | Msa0719150:CDS |
| GGAGAACAACCTCTTACAGA+AGG | 0.617644 | 5_1:+14168200 | Msa0719150:CDS |
| ACTGTGAACGGTGGATGAGT+TGG | 0.621139 | 5_1:-14165709 | None:intergenic |
| AATGGAGTACAGGCCAAGCA+AGG | 0.625052 | 5_1:+14168515 | Msa0719150:CDS |
| GGTAGGTGTAGAAGAACAGA+TGG | 0.627953 | 5_1:+14165981 | Msa0719150:CDS |
| CAGTCACTGAAGAGAGACTG+AGG | 0.628605 | 5_1:-14168462 | None:intergenic |
| GGTTTCTTAGAACCCTGAAG+AGG | 0.629209 | 5_1:-14166332 | None:intergenic |
| CCTGAAGAGGAAGAAGCATA+GGG | 0.630158 | 5_1:-14166319 | None:intergenic |
| AAGAAGCATAGGGTCCATGT+GGG | 0.631241 | 5_1:-14166309 | None:intergenic |
| GAAGAAGCATAGGGTCCATG+TGG | 0.633928 | 5_1:-14166310 | None:intergenic |
| TGAGTTGGTGACCACATCAA+CGG | 0.634344 | 5_1:-14165694 | None:intergenic |
| TGGCCTGTACTCCATTGCAG+AGG | 0.635477 | 5_1:-14168508 | None:intergenic |
| GAATTGGTGGTGAATTAAGG+AGG | 0.638839 | 5_1:-14165438 | None:intergenic |
| ATCAAGGAATGGTTCTACCA+TGG | 0.655574 | 5_1:+14168317 | Msa0719150:CDS |
| ATACCGTTCAAGAAAGCCTG+TGG | 0.663730 | 5_1:+14166076 | Msa0719150:CDS |
| AAGACACATGGTGTGTGGTG+TGG | 0.665242 | 5_1:+14168808 | Msa0719150:three_prime_UTR |
| ACTTCACTTCAGATGGCATG+TGG | 0.666198 | 5_1:+14168253 | Msa0719150:CDS |
| AAATTGACCCAGAACCAGGT+AGG | 0.671324 | 5_1:+14165964 | Msa0719150:CDS |
| GAAGTTGTAGTTGTCAACCA+TGG | 0.681166 | 5_1:-14168334 | None:intergenic |
| GTCACTGAAGAGAGACTGAG+GGG | 0.689928 | 5_1:-14168460 | None:intergenic |
| ATCGACGTCGAATCATATGA+CGG | 0.690045 | 5_1:-14166055 | None:intergenic |
| ATAGGTAAAAGGAGGTCAGG+AGG | 0.695933 | 5_1:-14165799 | None:intergenic |
| TTGTTAAGACACATGGTGTG+TGG | 0.724467 | 5_1:+14168803 | Msa0719150:three_prime_UTR |
| AGAAGCATAGGGTCCATGTG+GGG | 0.729236 | 5_1:-14166308 | None:intergenic |
| CATTGGGAGACTGTGAACGG+TGG | 0.744499 | 5_1:-14165718 | None:intergenic |
| GTTGGTGACCACATCAACGG+CGG | 0.749963 | 5_1:-14165691 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTGTTTTCAATA+TGG | + | chr5_1:14166389-14166408 | Msa0719150:intron | 10.0% |
| !!! | TTTTATATCTTTATGTTAAA+TGG | + | chr5_1:14166768-14166787 | Msa0719150:intron | 10.0% |
| !!! | TATTTCTTTTTATATCTATT+TGG | + | chr5_1:14167569-14167588 | Msa0719150:intron | 10.0% |
| !!! | ATACTTTATTTTATTCAACT+TGG | + | chr5_1:14166940-14166959 | Msa0719150:intron | 15.0% |
| !!! | AAGTGATTTTACTTTTTATA+AGG | + | chr5_1:14167941-14167960 | Msa0719150:intron | 15.0% |
| !!! | GGATATTAATATTTTTATGA+AGG | + | chr5_1:14167989-14168008 | Msa0719150:intron | 15.0% |
| !!! | TATTAATATTTTTATGAAGG+TGG | + | chr5_1:14167992-14168011 | Msa0719150:intron | 15.0% |
| !! | ATCAAAATAGAGACAAAATA+AGG | - | chr5_1:14165885-14165904 | None:intergenic | 20.0% |
| !!! | AAGGTTTAAGTTTCAATTTT+GGG | + | chr5_1:14166276-14166295 | Msa0719150:CDS | 20.0% |
| !! | AAAAAAGAAACATACCTATA+AGG | - | chr5_1:14166356-14166375 | None:intergenic | 20.0% |
| !! | AATCAATTGTGTAAACAAAA+AGG | - | chr5_1:14166750-14166769 | None:intergenic | 20.0% |
| !! | TTTATGTTAAATGGAGAATA+TGG | + | chr5_1:14166777-14166796 | Msa0719150:intron | 20.0% |
| !!! | ACTATATTTTGTTTTGACAA+AGG | + | chr5_1:14166914-14166933 | Msa0719150:intron | 20.0% |
| !!! | CGATATGATTTTTTAATTCT+AGG | + | chr5_1:14167592-14167611 | Msa0719150:intron | 20.0% |
| !! | AAAAAAGAAAAGAAGAGAAA+TGG | + | chr5_1:14167876-14167895 | Msa0719150:intron | 20.0% |
| !! | ACAAGTAGTTAAAAAAATGA+TGG | + | chr5_1:14168848-14168867 | Msa0719150:three_prime_UTR | 20.0% |
| !!! | TTTTGTTTTTGGGGTTTTTA+AGG | - | chr5_1:14165654-14165673 | None:intergenic | 25.0% |
| !!! | ATGCTCATGTTTTTGTTTTT+GGG | - | chr5_1:14165664-14165683 | None:intergenic | 25.0% |
| !!! | AATGCTCATGTTTTTGTTTT+TGG | - | chr5_1:14165665-14165684 | None:intergenic | 25.0% |
| !!! | TTTTGTGATTTTTGTTTCAG+TGG | + | chr5_1:14165926-14165945 | Msa0719150:intron | 25.0% |
| !!! | TTTGTGATTTTTGTTTCAGT+GGG | + | chr5_1:14165927-14165946 | Msa0719150:intron | 25.0% |
| !!! | GAAGGTTTAAGTTTCAATTT+TGG | + | chr5_1:14166275-14166294 | Msa0719150:CDS | 25.0% |
| ! | ATCCTGAATTGAATAATTCT+TGG | - | chr5_1:14166504-14166523 | None:intergenic | 25.0% |
| !!! | GTTTGTGTATTTGTTTTTTG+AGG | + | chr5_1:14166654-14166673 | Msa0719150:intron | 25.0% |
| ! | TTTGTGCATTGGATTTAATT+AGG | + | chr5_1:14167030-14167049 | Msa0719150:intron | 25.0% |
| ! | ATTTCAAATGACCATCAAAA+AGG | - | chr5_1:14167114-14167133 | None:intergenic | 25.0% |
| ! | TATTTGAACAAGTAATAACC+TGG | - | chr5_1:14167151-14167170 | None:intergenic | 25.0% |
| !!! | AATATTTTGAGTGAACTAAG+AGG | + | chr5_1:14167214-14167233 | Msa0719150:intron | 25.0% |
| ! | TGTGATAATATTGGAAATCA+AGG | + | chr5_1:14167242-14167261 | Msa0719150:intron | 25.0% |
| ! | GTGATAATATTGGAAATCAA+GGG | + | chr5_1:14167243-14167262 | Msa0719150:intron | 25.0% |
| ! | TTAAGACCAAAAACAAATGT+CGG | - | chr5_1:14167372-14167391 | None:intergenic | 25.0% |
| !!! | GTTTATTCTCTACTTTTAGA+CGG | + | chr5_1:14167694-14167713 | Msa0719150:intron | 25.0% |
| !! | TTATAGCAAGAGTTGTATTT+TGG | + | chr5_1:14167907-14167926 | Msa0719150:intron | 25.0% |
| !! | ACTTTTTATAAGGAACTTGT+AGG | + | chr5_1:14167951-14167970 | Msa0719150:intron | 25.0% |
| !!! | ATTTTTATGAAGGTGGATTA+AGG | + | chr5_1:14167999-14168018 | Msa0719150:intron | 25.0% |
| ! | TAAGTATTATCAGAAGTTGT+TGG | + | chr5_1:14168083-14168102 | Msa0719150:intron | 25.0% |
| ! | TACTTAACACACTCAATAAT+AGG | + | chr5_1:14168154-14168173 | Msa0719150:intron | 25.0% |
| ! | AATGCAACAAATCAAGAAAA+AGG | - | chr5_1:14168741-14168760 | None:intergenic | 25.0% |
| TTGGTAAATGGAAAAGGAAT+TGG | - | chr5_1:14165457-14165476 | None:intergenic | 30.0% | |
| !!! | TGCTCATGTTTTTGTTTTTG+GGG | - | chr5_1:14165663-14165682 | None:intergenic | 30.0% |
| ! | AATTGAAGACTTTTCCGAAT+AGG | - | chr5_1:14165820-14165839 | None:intergenic | 30.0% |
| TAAGGAAGATTAACGTTGTT+GGG | - | chr5_1:14165867-14165886 | None:intergenic | 30.0% | |
| ATAAGGAAGATTAACGTTGT+TGG | - | chr5_1:14165868-14165887 | None:intergenic | 30.0% | |
| !! | TTTGTTTCAGTGGGTTATTA+TGG | + | chr5_1:14165936-14165955 | Msa0719150:intron | 30.0% |
| AAGTTACATAACATGTGATG+TGG | + | chr5_1:14166813-14166832 | Msa0719150:intron | 30.0% | |
| ! | TGGTAAAAGATTTTGTGCAT+TGG | + | chr5_1:14167019-14167038 | Msa0719150:intron | 30.0% |
| ! | AAACTGAATTGCCTTTTTGA+TGG | + | chr5_1:14167100-14167119 | Msa0719150:intron | 30.0% |
| ! | GGTCATTTGAAATCATGATT+CGG | + | chr5_1:14167121-14167140 | Msa0719150:intron | 30.0% |
| GAGTTAAAGCAATTAAGTAG+AGG | + | chr5_1:14167324-14167343 | Msa0719150:intron | 30.0% | |
| ! | AGTTAGATGTTGGTTAGTTA+TGG | - | chr5_1:14167440-14167459 | None:intergenic | 30.0% |
| ! | TACTTGATGATTATCCAGAA+AGG | + | chr5_1:14167480-14167499 | Msa0719150:intron | 30.0% |
| ! | ACTTGATGATTATCCAGAAA+GGG | + | chr5_1:14167481-14167500 | Msa0719150:intron | 30.0% |
| ATATCACGACATCTAATTGA+TGG | - | chr5_1:14167618-14167637 | None:intergenic | 30.0% | |
| AACACACTCAATAATAGGTT+TGG | + | chr5_1:14168159-14168178 | Msa0719150:intron | 30.0% | |
| TTTCAATCAACATTGACATC+TGG | - | chr5_1:14168555-14168574 | None:intergenic | 30.0% | |
| TGATGTTGACAAAACTTCAT+AGG | - | chr5_1:14168617-14168636 | None:intergenic | 30.0% | |
| !! | ATGAAGTTTTGTCAACATCA+TGG | + | chr5_1:14168617-14168636 | Msa0719150:three_prime_UTR | 30.0% |
| CTTATGATTGTTAAGACACA+TGG | + | chr5_1:14168796-14168815 | Msa0719150:three_prime_UTR | 30.0% | |
| !! | AAGGAATTGGTGGTGAATTA+AGG | - | chr5_1:14165444-14165463 | None:intergenic | 35.0% |
| GTAAATGGAAAAGGAATTGG+TGG | - | chr5_1:14165454-14165473 | None:intergenic | 35.0% | |
| CCATCATTGGTAAATGGAAA+AGG | - | chr5_1:14165463-14165482 | None:intergenic | 35.0% | |
| ! | CCTTTTCCATTTACCAATGA+TGG | + | chr5_1:14165460-14165479 | Msa0719150:five_prime_UTR | 35.0% |
| GATTATAGAGAGAGAAGAGA+CGG | - | chr5_1:14165551-14165570 | None:intergenic | 35.0% | |
| AGAAGGATTGAATCTAGAAG+AGG | - | chr5_1:14165599-14165618 | None:intergenic | 35.0% | |
| ! | GATGATGATGAAGATGAAGA+AGG | - | chr5_1:14165616-14165635 | None:intergenic | 35.0% |
| ATCTTCAAGTATCTGAAAGC+TGG | + | chr5_1:14165766-14165785 | Msa0719150:CDS | 35.0% | |
| ! | TTTTCCGAATAGGTAAAAGG+AGG | - | chr5_1:14165810-14165829 | None:intergenic | 35.0% |
| ! | GACTTTTCCGAATAGGTAAA+AGG | - | chr5_1:14165813-14165832 | None:intergenic | 35.0% |
| AAAAAAATTGACCCAGAACC+AGG | + | chr5_1:14165960-14165979 | Msa0719150:CDS | 35.0% | |
| GAAGAACAGATGGCAAAAAA+TGG | + | chr5_1:14165991-14166010 | Msa0719150:CDS | 35.0% | |
| CAAAAAATGGAGATGTGCTA+GGG | + | chr5_1:14166004-14166023 | Msa0719150:CDS | 35.0% | |
| ACACTTCCTTTGCATACAAA+TGG | + | chr5_1:14166245-14166264 | Msa0719150:CDS | 35.0% | |
| !! | AGGGTTCTAAGAAACCTTAT+AGG | + | chr5_1:14166339-14166358 | Msa0719150:CDS | 35.0% |
| GTTTGGAGATAAGTAAAGTC+TGG | + | chr5_1:14166478-14166497 | Msa0719150:intron | 35.0% | |
| GGCCAAGAATTATTCAATTC+AGG | + | chr5_1:14166499-14166518 | Msa0719150:intron | 35.0% | |
| TTGTGTATTCGTGTGTGAAT+GGG | + | chr5_1:14166582-14166601 | Msa0719150:intron | 35.0% | |
| TAACACTTCGCAAGAAATCA+TGG | - | chr5_1:14166714-14166733 | None:intergenic | 35.0% | |
| ! | AAGTCATCTAGCCATAGTTT+TGG | + | chr5_1:14166880-14166899 | Msa0719150:intron | 35.0% |
| TGCAGTACCAATCACTTAAT+TGG | + | chr5_1:14166983-14167002 | Msa0719150:intron | 35.0% | |
| GCAGTACCAATCACTTAATT+GGG | + | chr5_1:14166984-14167003 | Msa0719150:intron | 35.0% | |
| ACCAATCACTTAATTGGGTT+TGG | + | chr5_1:14166989-14167008 | Msa0719150:intron | 35.0% | |
| !! | AAATCATGATTCGGTATTCC+AGG | + | chr5_1:14167130-14167149 | Msa0719150:intron | 35.0% |
| GAGGCATGATGTGATAATAT+TGG | + | chr5_1:14167233-14167252 | Msa0719150:intron | 35.0% | |
| ATTGGAAATCAAGGGAATTG+TGG | + | chr5_1:14167251-14167270 | Msa0719150:intron | 35.0% | |
| !! | AACCAACCGACATTTGTTTT+TGG | + | chr5_1:14167363-14167382 | Msa0719150:intron | 35.0% |
| !!! | TGTTTTTGGTCTTAATCCTC+TGG | + | chr5_1:14167377-14167396 | Msa0719150:intron | 35.0% |
| GTTAGATGCTAGTTAGATGT+TGG | - | chr5_1:14167450-14167469 | None:intergenic | 35.0% | |
| GATGACATGTTGAAGGAATT+TGG | + | chr5_1:14167538-14167557 | Msa0719150:intron | 35.0% | |
| AGTCAAACAAGAATGCAAGT+AGG | - | chr5_1:14167674-14167693 | None:intergenic | 35.0% | |
| TACATTGCTGAACAAGGAAA+AGG | - | chr5_1:14167780-14167799 | None:intergenic | 35.0% | |
| ACAATGTACATTGCTGAACA+AGG | - | chr5_1:14167786-14167805 | None:intergenic | 35.0% | |
| TGTCATTGATACCATGTAGA+TGG | + | chr5_1:14167803-14167822 | Msa0719150:intron | 35.0% | |
| AATTGCAAAAGACTACACGT+TGG | - | chr5_1:14168056-14168075 | None:intergenic | 35.0% | |
| TAATAGGTTTGGACTGAACT+CGG | + | chr5_1:14168170-14168189 | Msa0719150:intron | 35.0% | |
| CAAACACTGTTTCAGAATCA+AGG | + | chr5_1:14168301-14168320 | Msa0719150:CDS | 35.0% | |
| ACTGTTTCAGAATCAAGGAA+TGG | + | chr5_1:14168306-14168325 | Msa0719150:CDS | 35.0% | |
| TCCAAGGAAATCGTCTTTAA+CGG | + | chr5_1:14168405-14168424 | Msa0719150:CDS | 35.0% | |
| !! | TTGGTGTTAAAATCCTTGCT+TGG | - | chr5_1:14168531-14168550 | None:intergenic | 35.0% |
| ATCAACATTGACATCTGGAT+TGG | - | chr5_1:14168550-14168569 | None:intergenic | 35.0% | |
| ACAGTAGGAAAATTGAAGCT+TGG | - | chr5_1:14168651-14168670 | None:intergenic | 35.0% | |
| ! | TTTTCCTACTGTTCACTTGA+AGG | + | chr5_1:14168659-14168678 | Msa0719150:three_prime_UTR | 35.0% |
| GTTGAGCCATCATTGGTAAA+TGG | - | chr5_1:14165469-14165488 | None:intergenic | 40.0% | |
| TTTACCAATGATGGCTCAAC+TGG | + | chr5_1:14165469-14165488 | Msa0719150:five_prime_UTR | 40.0% | |
| !! | ATGTTCTAGCTCTTGCCATT+GGG | - | chr5_1:14165737-14165756 | None:intergenic | 40.0% |
| ! | CTGACCTCCTTTTACCTATT+CGG | + | chr5_1:14165803-14165822 | Msa0719150:CDS | 40.0% |
| GCAAAAAATGGAGATGTGCT+AGG | + | chr5_1:14166003-14166022 | Msa0719150:CDS | 40.0% | |
| ATCGACGTCGAATCATATGA+CGG | - | chr5_1:14166058-14166077 | None:intergenic | 40.0% | |
| ATTCCACAGGCTTTCTTGAA+CGG | - | chr5_1:14166082-14166101 | None:intergenic | 40.0% | |
| GAAGAAGAAGAAGATTCCAC+AGG | - | chr5_1:14166095-14166114 | None:intergenic | 40.0% | |
| AGTACTACTTCACAGCAACT+TGG | + | chr5_1:14166158-14166177 | Msa0719150:CDS | 40.0% | |
| CGAGTACCATTTGTATGCAA+AGG | - | chr5_1:14166254-14166273 | None:intergenic | 40.0% | |
| CATACAAATGGTACTCGTGA+AGG | + | chr5_1:14166257-14166276 | Msa0719150:CDS | 40.0% | |
| GTTGTATAACCCTCTAGTTG+CGG | + | chr5_1:14166426-14166445 | Msa0719150:intron | 40.0% | |
| TTGTATAACCCTCTAGTTGC+GGG | + | chr5_1:14166427-14166446 | Msa0719150:intron | 40.0% | |
| AACCGAACTCTGGATTATCA+GGG | - | chr5_1:14166461-14166480 | None:intergenic | 40.0% | |
| AAACCGAACTCTGGATTATC+AGG | - | chr5_1:14166462-14166481 | None:intergenic | 40.0% | |
| TGATAATCCAGAGTTCGGTT+TGG | + | chr5_1:14166461-14166480 | Msa0719150:intron | 40.0% | |
| GTTGTGTATTCGTGTGTGAA+TGG | + | chr5_1:14166581-14166600 | Msa0719150:intron | 40.0% | |
| TGTGTATTCGTGTGTGAATG+GGG | + | chr5_1:14166583-14166602 | Msa0719150:intron | 40.0% | |
| !!! | TTTTGAGGTGTTTTGCCTTG+TGG | + | chr5_1:14166669-14166688 | Msa0719150:intron | 40.0% |
| !! | TTTGAGGTGTTTTGCCTTGT+GGG | + | chr5_1:14166670-14166689 | Msa0719150:intron | 40.0% |
| GATCCTTATCATGTGTGTGT+GGG | + | chr5_1:14166835-14166854 | Msa0719150:intron | 40.0% | |
| ATCCTTATCATGTGTGTGTG+GGG | + | chr5_1:14166836-14166855 | Msa0719150:intron | 40.0% | |
| !!! | TCTAGCCATAGTTTTGGAGT+TGG | + | chr5_1:14166886-14166905 | Msa0719150:intron | 40.0% |
| ACAAGCCAACTCCAAAACTA+TGG | - | chr5_1:14166894-14166913 | None:intergenic | 40.0% | |
| GCCAAACCCAATTAAGTGAT+TGG | - | chr5_1:14166993-14167012 | None:intergenic | 40.0% | |
| TAATTGGGTTTGGCATGCTT+TGG | + | chr5_1:14166999-14167018 | Msa0719150:intron | 40.0% | |
| GACCAAAAACAAATGTCGGT+TGG | - | chr5_1:14167368-14167387 | None:intergenic | 40.0% | |
| CTGGATAATCATCAAGTAGC+AGG | - | chr5_1:14167478-14167497 | None:intergenic | 40.0% | |
| TGATGATTATCCAGAAAGGG+CGG | + | chr5_1:14167484-14167503 | Msa0719150:intron | 40.0% | |
| ! | ATAGATTTGAGCCGGTGTTA+TGG | + | chr5_1:14167515-14167534 | Msa0719150:intron | 40.0% |
| !! | TAGATTTGAGCCGGTGTTAT+GGG | + | chr5_1:14167516-14167535 | Msa0719150:intron | 40.0% |
| AACATGTCATCCCATAACAC+CGG | - | chr5_1:14167529-14167548 | None:intergenic | 40.0% | |
| GTTATGGGATGACATGTTGA+AGG | + | chr5_1:14167531-14167550 | Msa0719150:intron | 40.0% | |
| CAAACAAGAATGCAAGTAGG+AGG | - | chr5_1:14167671-14167690 | None:intergenic | 40.0% | |
| TGTAGGATCTGCGTATGAAA+TGG | + | chr5_1:14167968-14167987 | Msa0719150:intron | 40.0% | |
| CGTTGGATCATTAAGGCTTA+AGG | - | chr5_1:14168039-14168058 | None:intergenic | 40.0% | |
| GACTACACGTTGGATCATTA+AGG | - | chr5_1:14168046-14168065 | None:intergenic | 40.0% | |
| GTGTTAAGTAAACATCGCGA+TGG | - | chr5_1:14168144-14168163 | None:intergenic | 40.0% | |
| AACCTCTTACAGAAGGATCT+AGG | + | chr5_1:14168207-14168226 | Msa0719150:CDS | 40.0% | |
| TTCCTAGATCCTTCTGTAAG+AGG | - | chr5_1:14168212-14168231 | None:intergenic | 40.0% | |
| ! | CTAGGAACTGTGAAGTATCA+AGG | + | chr5_1:14168225-14168244 | Msa0719150:CDS | 40.0% |
| GGTTATGACTTCACTTCAGA+TGG | + | chr5_1:14168246-14168265 | Msa0719150:CDS | 40.0% | |
| ! | ATCAAGGAATGGTTCTACCA+TGG | + | chr5_1:14168317-14168336 | Msa0719150:CDS | 40.0% |
| GAAGTTGTAGTTGTCAACCA+TGG | - | chr5_1:14168337-14168356 | None:intergenic | 40.0% | |
| TTGTTAAGACACATGGTGTG+TGG | + | chr5_1:14168803-14168822 | Msa0719150:three_prime_UTR | 40.0% | |
| GAAACCAGTTGAGCCATCAT+TGG | - | chr5_1:14165476-14165495 | None:intergenic | 45.0% | |
| TATAGAGAGAGAAGAGACGG+TGG | - | chr5_1:14165548-14165567 | None:intergenic | 45.0% | |
| !! | TGAGTTGGTGACCACATCAA+CGG | - | chr5_1:14165697-14165716 | None:intergenic | 45.0% |
| !! | GATGTTCTAGCTCTTGCCAT+TGG | - | chr5_1:14165738-14165757 | None:intergenic | 45.0% |
| ATAGGTAAAAGGAGGTCAGG+AGG | - | chr5_1:14165802-14165821 | None:intergenic | 45.0% | |
| CGAATAGGTAAAAGGAGGTC+AGG | - | chr5_1:14165805-14165824 | None:intergenic | 45.0% | |
| GTTGTTGGGTACTTACGAGA+TGG | - | chr5_1:14165853-14165872 | None:intergenic | 45.0% | |
| AAATTGACCCAGAACCAGGT+AGG | + | chr5_1:14165964-14165983 | Msa0719150:CDS | 45.0% | |
| ! | TTCTACACCTACCTGGTTCT+GGG | - | chr5_1:14165974-14165993 | None:intergenic | 45.0% |
| TCTGTTCTTCTACACCTACC+TGG | - | chr5_1:14165981-14166000 | None:intergenic | 45.0% | |
| GGTAGGTGTAGAAGAACAGA+TGG | + | chr5_1:14165981-14166000 | Msa0719150:CDS | 45.0% | |
| CGGTCACAGTACTTAGAATC+AGG | - | chr5_1:14166038-14166057 | None:intergenic | 45.0% | |
| ATACCGTTCAAGAAAGCCTG+TGG | + | chr5_1:14166076-14166095 | Msa0719150:CDS | 45.0% | |
| ! | AAGAAGCATAGGGTCCATGT+GGG | - | chr5_1:14166312-14166331 | None:intergenic | 45.0% |
| ! | CCTGAAGAGGAAGAAGCATA+GGG | - | chr5_1:14166322-14166341 | None:intergenic | 45.0% |
| CCTATGCTTCTTCCTCTTCA+GGG | + | chr5_1:14166320-14166339 | Msa0719150:CDS | 45.0% | |
| GGTTTCTTAGAACCCTGAAG+AGG | - | chr5_1:14166335-14166354 | None:intergenic | 45.0% | |
| TGTATAACCCTCTAGTTGCG+GGG | + | chr5_1:14166428-14166447 | Msa0719150:intron | 45.0% | |
| GACCCTGATAATCCAGAGTT+CGG | + | chr5_1:14166456-14166475 | Msa0719150:intron | 45.0% | |
| CTTATCTCCAAACCGAACTC+TGG | - | chr5_1:14166471-14166490 | None:intergenic | 45.0% | |
| !! | TTGAGGTGTTTTGCCTTGTG+GGG | + | chr5_1:14166671-14166690 | Msa0719150:intron | 45.0% |
| ! | TTTTGCCTTGTGGGGTTTTG+AGG | + | chr5_1:14166679-14166698 | Msa0719150:intron | 45.0% |
| CATTTCCTCAAAACCCCACA+AGG | - | chr5_1:14166687-14166706 | None:intergenic | 45.0% | |
| GGATCCTTATCATGTGTGTG+TGG | + | chr5_1:14166834-14166853 | Msa0719150:intron | 45.0% | |
| TGGGGTGAGATTTGAGAGTA+AGG | + | chr5_1:14166854-14166873 | Msa0719150:intron | 45.0% | |
| AGCGGTTCATAGATTTGAGC+CGG | + | chr5_1:14167507-14167526 | Msa0719150:intron | 45.0% | |
| GACGGAACACATTGTAGTCT+TGG | + | chr5_1:14167712-14167731 | Msa0719150:intron | 45.0% | |
| TCGTTTCACAGCCATCTACA+TGG | - | chr5_1:14167817-14167836 | None:intergenic | 45.0% | |
| GTGAAACGAACATGCTGTAG+TGG | + | chr5_1:14167828-14167847 | Msa0719150:intron | 45.0% | |
| GGAGAACAACCTCTTACAGA+AGG | + | chr5_1:14168200-14168219 | Msa0719150:CDS | 45.0% | |
| ACTTCACTTCAGATGGCATG+TGG | + | chr5_1:14168253-14168272 | Msa0719150:CDS | 45.0% | |
| GCCGTTAAAGACGATTTCCT+TGG | - | chr5_1:14168409-14168428 | None:intergenic | 45.0% | |
| ATCGTCTTTAACGGCCAGTT+AGG | + | chr5_1:14168414-14168433 | Msa0719150:CDS | 45.0% | |
| CCTGTTTCAAGCTACCTAAC+TGG | - | chr5_1:14168431-14168450 | None:intergenic | 45.0% | |
| CCAGTTAGGTAGCTTGAAAC+AGG | + | chr5_1:14168428-14168447 | Msa0719150:CDS | 45.0% | |
| AGTCACTGAAGAGAGACTGA+GGG | - | chr5_1:14168464-14168483 | None:intergenic | 45.0% | |
| AGATTTAGCCTCCTCTGCAA+TGG | + | chr5_1:14168497-14168516 | Msa0719150:CDS | 45.0% | |
| TCCTACTGTTCACTTGAAGG+AGG | + | chr5_1:14168662-14168681 | Msa0719150:three_prime_UTR | 45.0% | |
| TCCTCCTTCAAGTGAACAGT+AGG | - | chr5_1:14168666-14168685 | None:intergenic | 45.0% | |
| ! | GGCTCAACTGGTTTCCTCTA+AGG | + | chr5_1:14165481-14165500 | Msa0719150:five_prime_UTR | 50.0% |
| TTCAACAACCGCCGTTGATG+TGG | + | chr5_1:14165683-14165702 | Msa0719150:CDS | 50.0% | |
| ACTGTGAACGGTGGATGAGT+TGG | - | chr5_1:14165712-14165731 | None:intergenic | 50.0% | |
| TGCCATTGGGAGACTGTGAA+CGG | - | chr5_1:14165724-14165743 | None:intergenic | 50.0% | |
| CTTCTACACCTACCTGGTTC+TGG | - | chr5_1:14165975-14165994 | None:intergenic | 50.0% | |
| !! | ACTTCACAGCAACTTGGTGC+TGG | + | chr5_1:14166164-14166183 | Msa0719150:CDS | 50.0% |
| ! | AGAAGCATAGGGTCCATGTG+GGG | - | chr5_1:14166311-14166330 | None:intergenic | 50.0% |
| ! | GAAGAAGCATAGGGTCCATG+TGG | - | chr5_1:14166313-14166332 | None:intergenic | 50.0% |
| CCCTATGCTTCTTCCTCTTC+AGG | + | chr5_1:14166319-14166338 | Msa0719150:CDS | 50.0% | |
| ! | CCCTGAAGAGGAAGAAGCAT+AGG | - | chr5_1:14166323-14166342 | None:intergenic | 50.0% |
| GTATAACCCTCTAGTTGCGG+GGG | + | chr5_1:14166429-14166448 | Msa0719150:intron | 50.0% | |
| TATAACCCTCTAGTTGCGGG+GGG | + | chr5_1:14166430-14166449 | Msa0719150:intron | 50.0% | |
| CACCCCACACACACATGATA+AGG | - | chr5_1:14166841-14166860 | None:intergenic | 50.0% | |
| CTACCAGAGCCTCTTCTCTT+GGG | - | chr5_1:14167405-14167424 | None:intergenic | 50.0% | |
| ACTACCAGAGCCTCTTCTCT+TGG | - | chr5_1:14167406-14167425 | None:intergenic | 50.0% | |
| ! | GGTTAGTTATGGCCGAACTC+CGG | - | chr5_1:14167429-14167448 | None:intergenic | 50.0% |
| ATTATCCAGAAAGGGCGGAG+CGG | + | chr5_1:14167489-14167508 | Msa0719150:intron | 50.0% | |
| CAGGTTCTCTTGTTCGCTGT+TGG | - | chr5_1:14168359-14168378 | None:intergenic | 50.0% | |
| TGTTTAACCTCGACGCTGCA+AGG | + | chr5_1:14168382-14168401 | Msa0719150:CDS | 50.0% | |
| GTCACTGAAGAGAGACTGAG+GGG | - | chr5_1:14168463-14168482 | None:intergenic | 50.0% | |
| CAGTCACTGAAGAGAGACTG+AGG | - | chr5_1:14168465-14168484 | None:intergenic | 50.0% | |
| CTCAGTCTCTCTTCAGTGAC+TGG | + | chr5_1:14168463-14168482 | Msa0719150:CDS | 50.0% | |
| AATGGAGTACAGGCCAAGCA+AGG | + | chr5_1:14168515-14168534 | Msa0719150:CDS | 50.0% | |
| AAGACACATGGTGTGTGGTG+TGG | + | chr5_1:14168808-14168827 | Msa0719150:three_prime_UTR | 50.0% | |
| AGAAGAGACGGTGGTTGTGG+TGG | - | chr5_1:14165539-14165558 | None:intergenic | 55.0% | |
| GAGAGAAGAGACGGTGGTTG+TGG | - | chr5_1:14165542-14165561 | None:intergenic | 55.0% | |
| !! | GTTGGTGACCACATCAACGG+CGG | - | chr5_1:14165694-14165713 | None:intergenic | 55.0% |
| CATTGGGAGACTGTGAACGG+TGG | - | chr5_1:14165721-14165740 | None:intergenic | 55.0% | |
| CACCGTTCACAGTCTCCCAA+TGG | + | chr5_1:14165719-14165738 | Msa0719150:CDS | 55.0% | |
| !! | TCACAGCAACTTGGTGCTGG+TGG | + | chr5_1:14166167-14166186 | Msa0719150:CDS | 55.0% |
| !! | CTTGGTGCTGGTGGTTCTAG+TGG | + | chr5_1:14166176-14166195 | Msa0719150:CDS | 55.0% |
| TGGGAACACCATACCCCACA+TGG | + | chr5_1:14166295-14166314 | Msa0719150:CDS | 55.0% | |
| CATAGGGTCCATGTGGGGTA+TGG | - | chr5_1:14166306-14166325 | None:intergenic | 55.0% | |
| CCTCTTCTCTTGGGAACCAG+AGG | - | chr5_1:14167396-14167415 | None:intergenic | 55.0% | |
| ! | CCTCTGGTTCCCAAGAGAAG+AGG | + | chr5_1:14167393-14167412 | Msa0719150:intron | 55.0% |
| GTTCCCAAGAGAAGAGGCTC+TGG | + | chr5_1:14167399-14167418 | Msa0719150:intron | 55.0% | |
| ! | GAGAAGAGGCTCTGGTAGTC+CGG | + | chr5_1:14167407-14167426 | Msa0719150:intron | 55.0% |
| TGGACTGAACTCGGAAGCAG+AGG | + | chr5_1:14168179-14168198 | Msa0719150:CDS | 55.0% | |
| GCGTCGAGGTTAAACAGCTC+AGG | - | chr5_1:14168378-14168397 | None:intergenic | 55.0% | |
| CTCTCTTCAGTGACTGGCAG+TGG | + | chr5_1:14168469-14168488 | Msa0719150:CDS | 55.0% | |
| CCTGTACTCCATTGCAGAGG+AGG | - | chr5_1:14168508-14168527 | None:intergenic | 55.0% | |
| CCTCCTCTGCAATGGAGTAC+AGG | + | chr5_1:14168505-14168524 | Msa0719150:CDS | 55.0% | |
| TGGCCTGTACTCCATTGCAG+AGG | - | chr5_1:14168511-14168530 | None:intergenic | 55.0% | |
| GGGTGGGGAGCTTACCTTAG+AGG | - | chr5_1:14165498-14165517 | None:intergenic | 60.0% | |
| TGAGGGAGGAGGAAAGGGTG+GGG | - | chr5_1:14165513-14165532 | None:intergenic | 60.0% | |
| GTGAGGGAGGAGGAAAGGGT+GGG | - | chr5_1:14165514-14165533 | None:intergenic | 60.0% | |
| GGTGGTGAGGGAGGAGGAAA+GGG | - | chr5_1:14165518-14165537 | None:intergenic | 60.0% | |
| ! | TGGTGGTGAGGGAGGAGGAA+AGG | - | chr5_1:14165519-14165538 | None:intergenic | 60.0% |
| !! | GGTGGTTGTGGTGGTGGTGA+GGG | - | chr5_1:14165530-14165549 | None:intergenic | 60.0% |
| AGAGACGGTGGTTGTGGTGG+TGG | - | chr5_1:14165536-14165555 | None:intergenic | 60.0% | |
| ! | GGCTCTGGTAGTCCGGAGTT+CGG | + | chr5_1:14167414-14167433 | Msa0719150:intron | 60.0% |
| ATGAACCGCTCCGCCCTTTC+TGG | - | chr5_1:14167497-14167516 | None:intergenic | 60.0% | |
| GGTGAGGGAGGAGGAAAGGG+TGG | - | chr5_1:14165515-14165534 | None:intergenic | 65.0% | |
| !! | TGTGGTGGTGGTGAGGGAGG+AGG | - | chr5_1:14165524-14165543 | None:intergenic | 65.0% |
| !! | GGTTGTGGTGGTGGTGAGGG+AGG | - | chr5_1:14165527-14165546 | None:intergenic | 65.0% |
| !! | CGGTGGTTGTGGTGGTGGTG+AGG | - | chr5_1:14165531-14165550 | None:intergenic | 65.0% |
| ACCCTCTAGTTGCGGGGGGA+CGG | + | chr5_1:14166434-14166453 | Msa0719150:intron | 65.0% | |
| TCCGTCCCCCCGCAACTAGA+GGG | - | chr5_1:14166438-14166457 | None:intergenic | 65.0% | |
| CCTTGGACCTTGCAGCGTCG+AGG | - | chr5_1:14168392-14168411 | None:intergenic | 65.0% | |
| CCTCGACGCTGCAAGGTCCA+AGG | + | chr5_1:14168389-14168408 | Msa0719150:CDS | 65.0% | |
| GTCCGTCCCCCCGCAACTAG+AGG | - | chr5_1:14166439-14166458 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 14165441 | 14168897 | 14165441 | ID=Msa0719150;Name=Msa0719150 |
| chr5_1 | mRNA | 14165441 | 14168897 | 14165441 | ID=Msa0719150-mRNA-1;Parent=Msa0719150;Name=Msa0719150-mRNA-1;_AED=0.03;_eAED=0.03;_QI=235|1|1|1|1|1|3|325|330 |
| chr5_1 | exon | 14165441 | 14165856 | 14165441 | ID=Msa0719150-mRNA-1:exon:5559;Parent=Msa0719150-mRNA-1 |
| chr5_1 | exon | 14165946 | 14166360 | 14165946 | ID=Msa0719150-mRNA-1:exon:5560;Parent=Msa0719150-mRNA-1 |
| chr5_1 | exon | 14168176 | 14168897 | 14168176 | ID=Msa0719150-mRNA-1:exon:5561;Parent=Msa0719150-mRNA-1 |
| chr5_1 | five_prime_UTR | 14165441 | 14165675 | 14165441 | ID=Msa0719150-mRNA-1:five_prime_utr;Parent=Msa0719150-mRNA-1 |
| chr5_1 | CDS | 14165676 | 14165856 | 14165676 | ID=Msa0719150-mRNA-1:cds;Parent=Msa0719150-mRNA-1 |
| chr5_1 | CDS | 14165946 | 14166360 | 14165946 | ID=Msa0719150-mRNA-1:cds;Parent=Msa0719150-mRNA-1 |
| chr5_1 | CDS | 14168176 | 14168572 | 14168176 | ID=Msa0719150-mRNA-1:cds;Parent=Msa0719150-mRNA-1 |
| chr5_1 | three_prime_UTR | 14168573 | 14168897 | 14168573 | ID=Msa0719150-mRNA-1:three_prime_utr;Parent=Msa0719150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
