AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0719240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0719240 MtrunA17_Chr5g0409731 93.431 274 17 1 1 273 2 275 0.0 527
Msa0719240 MtrunA17_Chr8g0356501 47.449 196 81 5 9 194 24 207 1.05e-52 175
Msa0719240 MtrunA17_Chr2g0321461 49.744 195 72 4 17 193 38 224 5.02e-51 172
Msa0719240 MtrunA17_Chr6g0461641 50.777 193 85 4 17 203 35 223 1.87e-50 170
Msa0719240 MtrunA17_Chr2g0310011 49.153 177 75 4 9 183 22 185 5.23e-48 162
Msa0719240 MtrunA17_Chr7g0254981 55.245 143 55 2 24 166 50 183 3.77e-47 159
Msa0719240 MtrunA17_Chr4g0042451 51.592 157 69 3 17 170 10 162 4.49e-45 155
Msa0719240 MtrunA17_Chr2g0291021 39.526 253 127 5 24 269 49 282 8.24e-45 154
Msa0719240 MtrunA17_Chr5g0417521 50.000 156 72 3 18 170 9 161 1.01e-44 154
Msa0719240 MtrunA17_Chr2g0290991 47.590 166 85 2 6 170 20 184 4.63e-43 149
Msa0719240 MtrunA17_Chr1g0197171 50.000 154 73 2 17 170 37 186 1.59e-42 147
Msa0719240 MtrunA17_Chr7g0261911 49.645 141 59 2 24 164 262 390 4.14e-36 134
Msa0719240 MtrunA17_Chr7g0274471 44.785 163 78 2 24 186 218 368 6.10e-36 133
Msa0719240 MtrunA17_Chr1g0190301 45.270 148 69 2 17 164 168 303 1.06e-33 126
Msa0719240 MtrunA17_Chr1g0175091 43.448 145 68 1 24 168 258 388 2.41e-33 125
Msa0719240 MtrunA17_Chr7g0258551 40.816 147 74 3 24 170 212 345 7.05e-30 115
Msa0719240 MtrunA17_Chr7g0242521 38.732 142 69 3 24 161 13 140 3.18e-25 100
Msa0719240 MtrunA17_Chr1g0175071 32.558 172 98 2 11 177 159 317 9.13e-21 90.1
Msa0719240 MtrunA17_Chr1g0175081 49.231 65 33 0 26 90 24 88 5.28e-19 80.1
Msa0719240 MtrunA17_Chr7g0243081 62.069 58 22 0 20 77 67 124 2.17e-18 83.6
Msa0719240 MtrunA17_Chr1g0210911 47.872 94 40 2 8 96 6 95 2.47e-18 83.6
Msa0719240 MtrunA17_Chr1g0162931 58.209 67 28 0 11 77 5 71 3.23e-18 82.4
Msa0719240 MtrunA17_Chr6g0479431 61.667 60 23 0 25 84 203 262 1.53e-17 81.6
Msa0719240 MtrunA17_Chr2g0288601 70.000 50 15 0 25 74 72 121 2.16e-17 76.6
Msa0719240 MtrunA17_Chr8g0366281 69.811 53 16 0 25 77 174 226 2.24e-17 80.9
Msa0719240 MtrunA17_Chr5g0410741 69.811 53 16 0 25 77 220 272 7.34e-17 79.7
Msa0719240 MtrunA17_Chr1g0154261 67.925 53 17 0 25 77 127 179 8.44e-17 78.6
Msa0719240 MtrunA17_Chr2g0320231 52.941 68 32 0 10 77 83 150 8.51e-17 79.3
Msa0719240 MtrunA17_Chr8g0379121 51.389 72 28 1 6 77 100 164 9.30e-17 79.7
Msa0719240 MtrunA17_Chr3g0095611 48.611 72 30 1 6 77 8 72 1.56e-16 76.3
Msa0719240 MtrunA17_Chr3g0109981 67.925 53 17 0 25 77 275 327 1.93e-16 79.0
Msa0719240 MtrunA17_Chr7g0258531 36.486 148 74 4 24 167 213 344 1.21e-15 75.9
Msa0719240 MtrunA17_Chr2g0283951 48.611 72 37 0 3 74 68 139 2.58e-14 72.0
Msa0719240 MtrunA17_Chr7g0255711 56.364 55 23 1 24 78 91 144 4.85e-12 65.1
Msa0719240 MtrunA17_Chr5g0402631 37.143 105 63 2 24 127 214 316 5.05e-12 65.5
Msa0719240 MtrunA17_Chr2g0304841 52.727 55 25 1 24 78 213 266 5.97e-12 65.9
Msa0719240 MtrunA17_Chr4g0062921 54.098 61 26 1 24 84 235 293 6.08e-12 65.5
Msa0719240 MtrunA17_Chr4g0067981 56.364 55 23 1 24 78 215 268 6.65e-12 65.5
Msa0719240 MtrunA17_Chr1g0198601 50.820 61 28 1 24 84 211 269 8.12e-12 64.7
Msa0719240 MtrunA17_Chr4g0031961 54.545 55 24 1 24 78 131 184 1.15e-11 63.9
Msa0719240 MtrunA17_Chr1g0161431 52.727 55 25 1 24 78 200 253 1.41e-11 64.7
Msa0719240 MtrunA17_Chr4g0045361 54.098 61 26 1 24 84 274 332 1.43e-11 64.3
Msa0719240 MtrunA17_Chr4g0009901 34.653 101 62 3 24 124 168 264 1.55e-11 63.2
Msa0719240 MtrunA17_Chr1g0149841 54.237 59 26 1 20 78 187 244 2.39e-11 63.5
Msa0719240 MtrunA17_Chr7g0275401 38.889 90 44 3 24 113 192 270 3.14e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0719240 AT5G45580.2 50.174 287 121 11 1 273 1 279 2.59e-76 234
Msa0719240 AT5G45580.1 50.929 269 111 10 19 273 2 263 2.25e-74 228
Msa0719240 AT3G24120.1 50.829 181 87 1 15 193 32 212 2.07e-57 186
Msa0719240 AT4G13640.1 50.286 175 85 1 15 187 28 202 1.20e-56 184
Msa0719240 AT3G24120.2 50.000 184 87 2 15 193 32 215 2.88e-55 180
Msa0719240 AT4G13640.2 49.438 178 85 2 15 187 28 205 2.02e-54 178
Msa0719240 AT3G04030.3 48.718 195 87 5 6 192 29 218 5.99e-52 174
Msa0719240 AT5G18240.1 48.187 193 91 4 6 192 29 218 1.10e-50 171
Msa0719240 AT5G18240.4 48.187 193 91 4 6 192 29 218 1.10e-50 171
Msa0719240 AT3G04030.2 47.692 195 88 6 6 192 29 217 6.77e-49 166
Msa0719240 AT1G79430.2 40.948 232 97 5 9 216 21 236 5.48e-48 163
Msa0719240 AT3G12730.1 47.273 165 69 4 17 172 16 171 1.18e-47 159
Msa0719240 AT5G18240.5 47.150 193 91 5 6 192 29 216 3.31e-47 162
Msa0719240 AT3G04030.1 46.667 195 85 6 6 192 29 212 4.07e-47 162
Msa0719240 AT5G18240.2 46.114 193 89 5 6 192 29 212 1.22e-45 158
Msa0719240 AT5G18240.3 46.114 193 89 5 6 192 29 212 1.22e-45 158
Msa0719240 AT1G69580.1 49.398 166 79 2 17 177 27 192 6.71e-45 155
Msa0719240 AT1G69580.2 48.503 167 80 2 17 177 27 193 3.24e-44 153
Msa0719240 AT2G01060.1 54.545 143 54 2 24 166 15 146 6.99e-44 150
Msa0719240 AT3G13040.3 46.250 160 76 2 24 180 241 393 1.39e-37 138
Msa0719240 AT3G13040.1 46.250 160 76 2 24 180 241 393 1.39e-37 138
Msa0719240 AT3G13040.2 46.250 160 76 2 24 180 241 393 1.39e-37 138
Msa0719240 AT4G28610.1 43.750 160 78 2 24 183 225 372 7.89e-35 130
Msa0719240 AT3G04450.4 44.521 146 66 2 24 166 198 331 7.16e-33 124
Msa0719240 AT3G04450.2 44.521 146 66 2 24 166 198 331 7.16e-33 124
Msa0719240 AT3G04450.1 44.521 146 66 2 24 166 238 371 9.20e-33 125
Msa0719240 AT5G06800.2 44.056 143 72 3 24 166 192 326 1.01e-32 124
Msa0719240 AT5G29000.1 44.828 145 67 2 24 166 188 321 2.17e-32 122
Msa0719240 AT5G29000.3 44.828 145 67 2 24 166 188 321 2.17e-32 122
Msa0719240 AT5G06800.1 44.755 143 66 3 24 166 192 321 2.36e-32 122
Msa0719240 AT5G29000.2 44.828 145 67 2 24 166 231 364 3.84e-32 122
Msa0719240 AT5G45580.3 39.815 216 109 10 72 273 16 224 2.20e-31 116
Msa0719240 AT3G04030.5 46.897 145 66 4 56 192 1 142 2.82e-29 113
Msa0719240 AT2G20400.2 43.165 139 68 1 26 164 233 360 2.41e-27 109
Msa0719240 AT2G20400.1 43.165 139 67 2 26 164 233 359 2.60e-26 106
Msa0719240 AT3G04030.4 44.138 145 64 5 56 192 1 136 1.46e-24 100
Msa0719240 AT5G18240.6 42.657 143 69 4 56 192 1 136 7.02e-24 99.0
Msa0719240 AT2G06020.1 43.200 125 48 4 20 129 82 198 8.03e-23 95.5
Msa0719240 AT2G01060.2 48.148 108 45 2 59 166 1 97 2.52e-22 93.2
Msa0719240 AT1G79430.1 44.167 120 48 3 56 170 1 106 6.07e-22 93.2
Msa0719240 AT3G12730.2 38.889 126 59 4 56 172 1 117 5.19e-21 88.2
Msa0719240 AT5G06800.3 54.688 64 29 0 24 87 192 255 7.72e-20 87.0
Msa0719240 AT2G42660.1 69.811 53 16 0 25 77 51 103 3.42e-19 84.7
Msa0719240 AT4G04605.1 55.556 63 28 0 15 77 5 67 6.74e-19 83.2
Msa0719240 AT5G29000.4 53.623 69 32 0 24 92 231 299 1.56e-18 84.0
Msa0719240 AT2G02060.2 51.807 83 36 1 2 80 3 85 1.90e-18 82.8
Msa0719240 AT2G02060.1 51.807 83 36 1 2 80 3 85 1.90e-18 82.8
Msa0719240 AT1G14600.1 56.000 75 31 1 5 77 2 76 2.66e-18 82.4
Msa0719240 AT3G04450.3 56.897 58 25 0 24 81 238 295 4.66e-18 82.8
Msa0719240 AT2G40260.1 57.812 64 27 0 14 77 72 135 5.05e-18 83.6
Msa0719240 AT4G04580.1 46.250 80 38 1 13 92 3 77 4.20e-17 77.0
Msa0719240 AT1G32240.2 69.811 53 16 0 25 77 214 266 5.64e-17 80.1
Msa0719240 AT1G32240.1 69.811 53 16 0 25 77 214 266 6.82e-17 80.1
Msa0719240 AT5G16560.1 67.925 53 17 0 25 77 220 272 1.03e-16 79.7
Msa0719240 AT5G42630.2 66.038 53 18 0 25 77 106 158 1.12e-16 77.4
Msa0719240 AT2G38300.1 61.404 57 22 0 21 77 51 107 1.33e-16 79.0
Msa0719240 AT5G42630.1 66.038 53 18 0 25 77 106 158 2.75e-16 77.4
Msa0719240 AT4G17695.1 66.038 53 18 0 25 77 165 217 4.81e-16 77.0
Msa0719240 AT4G37180.1 55.932 59 24 1 26 84 212 268 3.34e-13 69.3
Msa0719240 AT4G37180.2 55.932 59 24 1 26 84 219 275 3.79e-13 68.9
Msa0719240 AT3G25790.1 39.286 112 51 4 29 127 201 308 6.50e-13 68.6
Msa0719240 AT3G10760.1 51.351 74 31 3 5 78 90 158 8.67e-13 67.8
Msa0719240 AT1G49560.1 46.988 83 42 1 24 106 192 272 2.15e-12 66.6
Msa0719240 AT4G04555.1 46.032 63 34 0 15 77 5 67 2.18e-12 62.8
Msa0719240 AT5G05090.1 56.364 55 23 1 24 78 81 134 2.67e-12 65.9
Msa0719240 AT3G46640.2 54.545 55 24 1 24 78 144 197 5.86e-12 65.5
Msa0719240 AT3G46640.1 54.545 55 24 1 24 78 144 197 5.86e-12 65.5
Msa0719240 AT5G59570.2 54.545 55 24 1 24 78 141 194 6.28e-12 65.1
Msa0719240 AT5G59570.1 54.545 55 24 1 24 78 141 194 6.28e-12 65.1
Msa0719240 AT3G46640.3 54.545 55 24 1 24 78 144 197 6.66e-12 65.1
Msa0719240 AT5G58080.1 51.515 66 29 2 24 89 194 256 7.23e-12 65.9
Msa0719240 AT2G40970.1 56.364 55 23 1 24 78 105 158 1.09e-11 63.9
Msa0719240 AT2G03500.1 54.098 61 26 1 24 84 233 291 2.33e-11 63.9
Msa0719240 AT1G13300.1 50.820 61 28 1 24 84 181 239 4.11e-11 63.2
Msa0719240 AT3G16857.3 52.727 55 25 1 24 78 167 220 4.24e-11 63.5
Msa0719240 AT3G16857.1 52.727 55 25 1 24 78 237 290 4.78e-11 63.5
Msa0719240 AT3G16857.2 52.727 55 25 1 24 78 237 290 4.88e-11 63.5
Msa0719240 AT2G01760.3 52.727 55 25 1 24 78 135 188 7.07e-11 62.0

Find 66 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAGCTTTGTCAAATTTCA+TGG 0.192891 5_1:-14270287 Msa0719240:CDS
TGCCTTAGTGCTTCTCCTAT+TGG 0.203121 5_1:+14270873 None:intergenic
ATTAACCTTAGAACAGATTT+AGG 0.207865 5_1:+14271801 None:intergenic
TAAATCTGTTCTAAGGTTAA+TGG 0.217308 5_1:-14271799 Msa0719240:CDS
GCCTTAGTGCTTCTCCTATT+GGG 0.237177 5_1:+14270874 None:intergenic
CTAAGGTTAATGGGATTAAA+AGG 0.242641 5_1:-14271789 Msa0719240:CDS
GTCCACCTCAACCTCGGCTT+CGG 0.264907 5_1:+14272345 None:intergenic
AGAGGCTCAAGGGAAGTATT+TGG 0.284186 5_1:-14270398 Msa0719240:CDS
CAGCTAGACTTACACATTAA+AGG 0.298635 5_1:-14270118 Msa0719240:CDS
TCATTTGAAGAGCCATTTAC+AGG 0.303807 5_1:-14271754 Msa0719240:intron
AATTTCAGTAACCATTCTTC+AGG 0.305474 5_1:-14271157 Msa0719240:CDS
AAATCTGTTCTAAGGTTAAT+GGG 0.321195 5_1:-14271798 Msa0719240:CDS
ATCCAATATGGTTTCATATA+GGG 0.323553 5_1:-14270056 Msa0719240:CDS
AATCCAATATGGTTTCATAT+AGG 0.356297 5_1:-14270057 Msa0719240:CDS
GGAGGGAGAGGAGGAATTGA+AGG 0.362824 5_1:-14272402 Msa0719240:CDS
ACTAGGGACAGAAGAAAATA+AGG 0.364063 5_1:-14270173 Msa0719240:CDS
TAGAAGTTGTTACCTGTAAA+TGG 0.368392 5_1:+14271742 None:intergenic
TAATGCATCAAAAGCTCAAT+TGG 0.371170 5_1:-14270320 Msa0719240:CDS
AATTGAAGTTCAAAAGAGAT+TGG 0.388648 5_1:-14270847 Msa0719240:CDS
AGCTGAAATGGAATCCAATA+TGG 0.390326 5_1:-14270068 Msa0719240:CDS
TACCCTATATGAAACCATAT+TGG 0.394354 5_1:+14270054 None:intergenic
CGACTCCTAAATCTGTTCTA+AGG 0.397762 5_1:-14271806 Msa0719240:CDS
TCCACCTCAACCTCGGCTTC+GGG 0.399137 5_1:+14272346 None:intergenic
TCAGGGACTAATAACAACTA+TGG 0.437815 5_1:-14271139 Msa0719240:CDS
ATCTGTAGATGGAGCTGAAA+TGG 0.439210 5_1:-14270080 Msa0719240:CDS
TGCTCTGTCCATCTTGAGAA+AGG 0.439571 5_1:+14270347 None:intergenic
ATGATGGAAAGTGGAGGGAG+AGG 0.440510 5_1:-14272414 Msa0719240:CDS
TTCAATTATCAAGAAGTACT+AGG 0.442529 5_1:-14270190 Msa0719240:CDS
GGAGAGGGTATGATGGAAAG+TGG 0.456884 5_1:-14272423 None:intergenic
GAACTAAAGCCTCAAGTTGA+AGG 0.464648 5_1:-14270151 Msa0719240:CDS
TGTTATTAGTCCCTGAAGAA+TGG 0.466053 5_1:+14271146 None:intergenic
TAAATTGCAAATGAGAATAG+AGG 0.480939 5_1:-14270416 Msa0719240:CDS
AACAAAGCGGTCGTGAAGAT+CGG 0.492450 5_1:+14272320 None:intergenic
ATTCACAGAGAAATCCCAAT+AGG 0.498124 5_1:-14270888 Msa0719240:intron
GTTGACGCTGTCACAAAGCT+TGG 0.498295 5_1:-14272300 Msa0719240:CDS
ATTTCAGTAACCATTCTTCA+GGG 0.498736 5_1:-14271156 Msa0719240:CDS
AATGAACTTGTATCTGTAGA+TGG 0.501826 5_1:-14270091 Msa0719240:CDS
ACTATGGAGGTGATAATGTA+GGG 0.521460 5_1:-14271123 Msa0719240:CDS
ATGGAAAGTGGAGGGAGAGG+AGG 0.521924 5_1:-14272411 Msa0719240:CDS
AACTATGGAGGTGATAATGT+AGG 0.537140 5_1:-14271124 Msa0719240:CDS
GAGGGAGAGGAGGAATTGAA+GGG 0.537312 5_1:-14272401 Msa0719240:CDS
GGAGGAATTGAAGGGTACGA+TGG 0.538015 5_1:-14272393 Msa0719240:CDS
ACCCGAAGCCGAGGTTGAGG+TGG 0.538160 5_1:-14272347 Msa0719240:CDS
GAGACCCGAAGCCGAGGTTG+AGG 0.538216 5_1:-14272350 Msa0719240:CDS
AACTAAAGCCTCAAGTTGAA+GGG 0.540564 5_1:-14270150 Msa0719240:CDS
TCAATTATCAAGAAGTACTA+GGG 0.553916 5_1:-14270189 Msa0719240:CDS
ACTAAAGCCTCAAGTTGAAG+GGG 0.554788 5_1:-14270149 Msa0719240:CDS
TCCCAATAGGAGAAGCACTA+AGG 0.559258 5_1:-14270875 Msa0719240:CDS
CAAACAAGCCTTTCTCAAGA+TGG 0.560229 5_1:-14270355 Msa0719240:CDS
GAGGGTATGATGGAAAGTGG+AGG 0.565667 5_1:-14272420 None:intergenic
AGGGTATGATGGAAAGTGGA+GGG 0.568191 5_1:-14272419 None:intergenic
GGCTCAAGGGAAGTATTTGG+AGG 0.583375 5_1:-14270395 Msa0719240:CDS
AACTTGCAGAAGTATAGACT+TGG 0.584376 5_1:-14271441 Msa0719240:intron
GACGCTGTCACAAAGCTTGG+TGG 0.598228 5_1:-14272297 Msa0719240:CDS
AAATGAGAATAGAGGCTCAA+GGG 0.615268 5_1:-14270408 Msa0719240:CDS
CAAATGAGAATAGAGGCTCA+AGG 0.629250 5_1:-14270409 Msa0719240:CDS
TGACGAGAGACCCGAAGCCG+AGG 0.631016 5_1:-14272356 Msa0719240:CDS
CTAGACTTACACATTAAAGG+TGG 0.668133 5_1:-14270115 Msa0719240:CDS
GGGACTAATAACAACTATGG+AGG 0.669862 5_1:-14271136 Msa0719240:CDS
ATGGAGGTGATAATGTAGGG+GGG 0.671828 5_1:-14271120 Msa0719240:intron
TATGGAGGTGATAATGTAGG+GGG 0.674191 5_1:-14271121 Msa0719240:CDS
CTATGGAGGTGATAATGTAG+GGG 0.674421 5_1:-14271122 Msa0719240:CDS
TCGGTTGTCCACCTCAACCT+CGG 0.676640 5_1:+14272339 None:intergenic
GAGATTGGAAGAACAACTTG+AGG 0.683401 5_1:-14270832 Msa0719240:intron
TTGTGACAGCGTCAACAAAG+CGG 0.705022 5_1:+14272307 None:intergenic
CTAAAGCCTCAAGTTGAAGG+GGG 0.707595 5_1:-14270148 Msa0719240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTAAATATTTTCTTATTAA+TGG - chr5_1:14270536-14270555 Msa0719240:intron 10.0%
!!! ATTTTATTTTTTGACTAAAA+AGG + chr5_1:14270740-14270759 None:intergenic 10.0%
!!! ATGATATATTTAATTTATGA+AGG - chr5_1:14270802-14270821 Msa0719240:intron 10.0%
!!! TAATTAGCATTTTAATTTTT+AGG - chr5_1:14271502-14271521 Msa0719240:intron 10.0%
!!! TCTAAATATTTTCTTATTAA+TGG - chr5_1:14270536-14270555 Msa0719240:intron 10.0%
!!! ATTTTATTTTTTGACTAAAA+AGG + chr5_1:14270740-14270759 None:intergenic 10.0%
!!! ATGATATATTTAATTTATGA+AGG - chr5_1:14270802-14270821 Msa0719240:intron 10.0%
!!! TAATTAGCATTTTAATTTTT+AGG - chr5_1:14271502-14271521 Msa0719240:intron 10.0%
!!! AACACTAGAATTTTAAATAA+AGG + chr5_1:14270408-14270427 None:intergenic 15.0%
!! TATTATCATTAATTAGAGAA+TGG - chr5_1:14270888-14270907 Msa0719240:intron 15.0%
!! AATTAAAATGCTAATTACAT+GGG + chr5_1:14271499-14271518 None:intergenic 15.0%
!! AAATTAAAATGCTAATTACA+TGG + chr5_1:14271500-14271519 None:intergenic 15.0%
!!! AACACTAGAATTTTAAATAA+AGG + chr5_1:14270408-14270427 None:intergenic 15.0%
!! TATTATCATTAATTAGAGAA+TGG - chr5_1:14270888-14270907 Msa0719240:intron 15.0%
!! AATTAAAATGCTAATTACAT+GGG + chr5_1:14271499-14271518 None:intergenic 15.0%
!! AAATTAAAATGCTAATTACA+TGG + chr5_1:14271500-14271519 None:intergenic 15.0%
!!! TTATTTTTTGACTAAAAAGG+TGG + chr5_1:14270737-14270756 None:intergenic 20.0%
!! TATATCATCACTATGTAAAA+AGG + chr5_1:14270790-14270809 None:intergenic 20.0%
!! ATAAACTAGCAGTTAAAAAT+AGG - chr5_1:14270826-14270845 Msa0719240:intron 20.0%
!!! GCAATTATTTCTATTACATT+TGG - chr5_1:14271231-14271250 Msa0719240:intron 20.0%
!!! TTTTTGTCTTTCATCTTTTT+AGG - chr5_1:14271260-14271279 Msa0719240:intron 20.0%
!!! TTATTTTTTGACTAAAAAGG+TGG + chr5_1:14270737-14270756 None:intergenic 20.0%
!! TATATCATCACTATGTAAAA+AGG + chr5_1:14270790-14270809 None:intergenic 20.0%
!! ATAAACTAGCAGTTAAAAAT+AGG - chr5_1:14270826-14270845 Msa0719240:intron 20.0%
!!! GCAATTATTTCTATTACATT+TGG - chr5_1:14271231-14271250 Msa0719240:intron 20.0%
!!! TTTTTGTCTTTCATCTTTTT+AGG - chr5_1:14271260-14271279 Msa0719240:intron 20.0%
!! ACATTCAAGTTAACTTGAAA+GGG - chr5_1:14270434-14270453 Msa0719240:intron 25.0%
! ATTAACCTTAGAACAGATTT+AGG + chr5_1:14270655-14270674 None:intergenic 25.0%
!!! TAAATCTGTTCTAAGGTTAA+TGG - chr5_1:14270654-14270673 Msa0719240:intron 25.0%
!!! AAATCTGTTCTAAGGTTAAT+GGG - chr5_1:14270655-14270674 Msa0719240:intron 25.0%
! ATGTAAAAAGGCAAAAGAAA+AGG + chr5_1:14270778-14270797 None:intergenic 25.0%
!!! TTTTGAAAGAGATGAGAATT+TGG + chr5_1:14271436-14271455 None:intergenic 25.0%
!!! AGAAGTTTTAGATGAGAATT+TGG + chr5_1:14271474-14271493 None:intergenic 25.0%
! AATTGAAGTTCAAAAGAGAT+TGG - chr5_1:14271606-14271625 Msa0719240:intron 25.0%
! TTCTCAATTGTCAATTACAT+AGG + chr5_1:14271732-14271751 None:intergenic 25.0%
! TAAGGATATATATACTCCTT+TGG + chr5_1:14271964-14271983 None:intergenic 25.0%
! TAAATTGCAAATGAGAATAG+AGG - chr5_1:14272037-14272056 Msa0719240:intron 25.0%
!!! TTCAATTATCAAGAAGTACT+AGG - chr5_1:14272263-14272282 Msa0719240:intron 25.0%
!!! TCAATTATCAAGAAGTACTA+GGG - chr5_1:14272264-14272283 Msa0719240:intron 25.0%
! AATCCAATATGGTTTCATAT+AGG - chr5_1:14272396-14272415 Msa0719240:CDS 25.0%
! ATCCAATATGGTTTCATATA+GGG - chr5_1:14272397-14272416 Msa0719240:CDS 25.0%
!! ACATTCAAGTTAACTTGAAA+GGG - chr5_1:14270434-14270453 Msa0719240:intron 25.0%
! ATTAACCTTAGAACAGATTT+AGG + chr5_1:14270655-14270674 None:intergenic 25.0%
!!! TAAATCTGTTCTAAGGTTAA+TGG - chr5_1:14270654-14270673 Msa0719240:intron 25.0%
!!! AAATCTGTTCTAAGGTTAAT+GGG - chr5_1:14270655-14270674 Msa0719240:intron 25.0%
! ATGTAAAAAGGCAAAAGAAA+AGG + chr5_1:14270778-14270797 None:intergenic 25.0%
!!! TTTTGAAAGAGATGAGAATT+TGG + chr5_1:14271436-14271455 None:intergenic 25.0%
!!! AGAAGTTTTAGATGAGAATT+TGG + chr5_1:14271474-14271493 None:intergenic 25.0%
! AATTGAAGTTCAAAAGAGAT+TGG - chr5_1:14271606-14271625 Msa0719240:intron 25.0%
! TTCTCAATTGTCAATTACAT+AGG + chr5_1:14271732-14271751 None:intergenic 25.0%
! TAAGGATATATATACTCCTT+TGG + chr5_1:14271964-14271983 None:intergenic 25.0%
! TAAATTGCAAATGAGAATAG+AGG - chr5_1:14272037-14272056 Msa0719240:intron 25.0%
!!! TTCAATTATCAAGAAGTACT+AGG - chr5_1:14272263-14272282 Msa0719240:intron 25.0%
!!! TCAATTATCAAGAAGTACTA+GGG - chr5_1:14272264-14272283 Msa0719240:intron 25.0%
! AATCCAATATGGTTTCATAT+AGG - chr5_1:14272396-14272415 Msa0719240:CDS 25.0%
! ATCCAATATGGTTTCATATA+GGG - chr5_1:14272397-14272416 Msa0719240:CDS 25.0%
! GTTTTTCTATGTCTTTGCTA+CGG + chr5_1:14270353-14270372 None:intergenic 30.0%
! CACATTCAAGTTAACTTGAA+AGG - chr5_1:14270433-14270452 Msa0719240:intron 30.0%
!!! ACTTGAAAGGGAAGTTTTTT+TGG - chr5_1:14270446-14270465 Msa0719240:intron 30.0%
TGGTTAGATTTGACATTGAA+AGG - chr5_1:14270466-14270485 Msa0719240:intron 30.0%
GAATCATAAGCTTTCACAAT+TGG + chr5_1:14270518-14270537 None:intergenic 30.0%
!! TTGTTTGCTTTTGTGTTTAG+AGG - chr5_1:14270624-14270643 Msa0719240:intron 30.0%
CTAAGGTTAATGGGATTAAA+AGG - chr5_1:14270664-14270683 Msa0719240:intron 30.0%
TAGAAGTTGTTACCTGTAAA+TGG + chr5_1:14270714-14270733 None:intergenic 30.0%
AAAGAGTCTCAAATAAGTGA+AGG - chr5_1:14271103-14271122 Msa0719240:intron 30.0%
AAGAGTCTCAAATAAGTGAA+GGG - chr5_1:14271104-14271123 Msa0719240:intron 30.0%
AATTTCAGTAACCATTCTTC+AGG - chr5_1:14271296-14271315 Msa0719240:intron 30.0%
ATTTCAGTAACCATTCTTCA+GGG - chr5_1:14271297-14271316 Msa0719240:intron 30.0%
GAATTGTCGTTAAACTAGTT+AGG + chr5_1:14271549-14271568 None:intergenic 30.0%
! GACTCACATACTAATTTTAG+TGG + chr5_1:14271928-14271947 None:intergenic 30.0%
GTCTTATAATAAGAGACCAA+AGG - chr5_1:14271945-14271964 Msa0719240:intron 30.0%
GGTTAGAAATTCACTAGTTA+GGG + chr5_1:14271988-14272007 None:intergenic 30.0%
TGGTTAGAAATTCACTAGTT+AGG + chr5_1:14271989-14272008 None:intergenic 30.0%
CTAGTGAATTTCTAACCAAT+TGG - chr5_1:14271991-14272010 Msa0719240:intron 30.0%
CTAGAATTAAACAGTCCAAT+TGG + chr5_1:14272009-14272028 None:intergenic 30.0%
CAATTGGACTGTTTAATTCT+AGG - chr5_1:14272007-14272026 Msa0719240:intron 30.0%
TAATGCATCAAAAGCTCAAT+TGG - chr5_1:14272133-14272152 Msa0719240:intron 30.0%
AATGAACTTGTATCTGTAGA+TGG - chr5_1:14272362-14272381 Msa0719240:CDS 30.0%
TACCCTATATGAAACCATAT+TGG + chr5_1:14272402-14272421 None:intergenic 30.0%
! GTTTTTCTATGTCTTTGCTA+CGG + chr5_1:14270353-14270372 None:intergenic 30.0%
! CACATTCAAGTTAACTTGAA+AGG - chr5_1:14270433-14270452 Msa0719240:intron 30.0%
!!! ACTTGAAAGGGAAGTTTTTT+TGG - chr5_1:14270446-14270465 Msa0719240:intron 30.0%
TGGTTAGATTTGACATTGAA+AGG - chr5_1:14270466-14270485 Msa0719240:intron 30.0%
GAATCATAAGCTTTCACAAT+TGG + chr5_1:14270518-14270537 None:intergenic 30.0%
!! TTGTTTGCTTTTGTGTTTAG+AGG - chr5_1:14270624-14270643 Msa0719240:intron 30.0%
CTAAGGTTAATGGGATTAAA+AGG - chr5_1:14270664-14270683 Msa0719240:intron 30.0%
TAGAAGTTGTTACCTGTAAA+TGG + chr5_1:14270714-14270733 None:intergenic 30.0%
AAAGAGTCTCAAATAAGTGA+AGG - chr5_1:14271103-14271122 Msa0719240:intron 30.0%
AAGAGTCTCAAATAAGTGAA+GGG - chr5_1:14271104-14271123 Msa0719240:intron 30.0%
AATTTCAGTAACCATTCTTC+AGG - chr5_1:14271296-14271315 Msa0719240:intron 30.0%
ATTTCAGTAACCATTCTTCA+GGG - chr5_1:14271297-14271316 Msa0719240:intron 30.0%
GAATTGTCGTTAAACTAGTT+AGG + chr5_1:14271549-14271568 None:intergenic 30.0%
! GACTCACATACTAATTTTAG+TGG + chr5_1:14271928-14271947 None:intergenic 30.0%
GTCTTATAATAAGAGACCAA+AGG - chr5_1:14271945-14271964 Msa0719240:intron 30.0%
GGTTAGAAATTCACTAGTTA+GGG + chr5_1:14271988-14272007 None:intergenic 30.0%
TGGTTAGAAATTCACTAGTT+AGG + chr5_1:14271989-14272008 None:intergenic 30.0%
CTAGTGAATTTCTAACCAAT+TGG - chr5_1:14271991-14272010 Msa0719240:intron 30.0%
CTAGAATTAAACAGTCCAAT+TGG + chr5_1:14272009-14272028 None:intergenic 30.0%
CAATTGGACTGTTTAATTCT+AGG - chr5_1:14272007-14272026 Msa0719240:intron 30.0%
TAATGCATCAAAAGCTCAAT+TGG - chr5_1:14272133-14272152 Msa0719240:intron 30.0%
AATGAACTTGTATCTGTAGA+TGG - chr5_1:14272362-14272381 Msa0719240:CDS 30.0%
TACCCTATATGAAACCATAT+TGG + chr5_1:14272402-14272421 None:intergenic 30.0%
! GACATTGAAAGGAAGTATGA+TGG - chr5_1:14270477-14270496 Msa0719240:intron 35.0%
! AGGAAGTATGATGGAGAATT+TGG - chr5_1:14270486-14270505 Msa0719240:intron 35.0%
! GGAAGTATGATGGAGAATTT+GGG - chr5_1:14270487-14270506 Msa0719240:intron 35.0%
TCATTTGAAGAGCCATTTAC+AGG - chr5_1:14270699-14270718 Msa0719240:intron 35.0%
TAGAGAATGGTGCACTTTAA+AGG - chr5_1:14270901-14270920 Msa0719240:intron 35.0%
AGAGAATGGTGCACTTTAAA+GGG - chr5_1:14270902-14270921 Msa0719240:intron 35.0%
! AACTTGCAGAAGTATAGACT+TGG - chr5_1:14271012-14271031 Msa0719240:intron 35.0%
AGAGTCTCAAATAAGTGAAG+GGG - chr5_1:14271105-14271124 Msa0719240:intron 35.0%
TGTTATTAGTCCCTGAAGAA+TGG + chr5_1:14271310-14271329 None:intergenic 35.0%
TCAGGGACTAATAACAACTA+TGG - chr5_1:14271314-14271333 Msa0719240:intron 35.0%
! AACTATGGAGGTGATAATGT+AGG - chr5_1:14271329-14271348 Msa0719240:intron 35.0%
! ACTATGGAGGTGATAATGTA+GGG - chr5_1:14271330-14271349 Msa0719240:intron 35.0%
ATTCACAGAGAAATCCCAAT+AGG - chr5_1:14271565-14271584 Msa0719240:intron 35.0%
AAATTCACTAGTTAGGGCTA+AGG + chr5_1:14271982-14272001 None:intergenic 35.0%
AAATGAGAATAGAGGCTCAA+GGG - chr5_1:14272045-14272064 Msa0719240:intron 35.0%
! CTCAGCTTTGTCAAATTTCA+TGG - chr5_1:14272166-14272185 Msa0719240:intron 35.0%
ACTAGGGACAGAAGAAAATA+AGG - chr5_1:14272280-14272299 Msa0719240:intron 35.0%
!! AACTAAAGCCTCAAGTTGAA+GGG - chr5_1:14272303-14272322 Msa0719240:CDS 35.0%
CAGCTAGACTTACACATTAA+AGG - chr5_1:14272335-14272354 Msa0719240:CDS 35.0%
CTAGACTTACACATTAAAGG+TGG - chr5_1:14272338-14272357 Msa0719240:CDS 35.0%
AGCTGAAATGGAATCCAATA+TGG - chr5_1:14272385-14272404 Msa0719240:CDS 35.0%
! GACATTGAAAGGAAGTATGA+TGG - chr5_1:14270477-14270496 Msa0719240:intron 35.0%
! AGGAAGTATGATGGAGAATT+TGG - chr5_1:14270486-14270505 Msa0719240:intron 35.0%
! GGAAGTATGATGGAGAATTT+GGG - chr5_1:14270487-14270506 Msa0719240:intron 35.0%
TCATTTGAAGAGCCATTTAC+AGG - chr5_1:14270699-14270718 Msa0719240:intron 35.0%
TAGAGAATGGTGCACTTTAA+AGG - chr5_1:14270901-14270920 Msa0719240:intron 35.0%
AGAGAATGGTGCACTTTAAA+GGG - chr5_1:14270902-14270921 Msa0719240:intron 35.0%
! AACTTGCAGAAGTATAGACT+TGG - chr5_1:14271012-14271031 Msa0719240:intron 35.0%
AGAGTCTCAAATAAGTGAAG+GGG - chr5_1:14271105-14271124 Msa0719240:intron 35.0%
TGTTATTAGTCCCTGAAGAA+TGG + chr5_1:14271310-14271329 None:intergenic 35.0%
TCAGGGACTAATAACAACTA+TGG - chr5_1:14271314-14271333 Msa0719240:intron 35.0%
! AACTATGGAGGTGATAATGT+AGG - chr5_1:14271329-14271348 Msa0719240:intron 35.0%
! ACTATGGAGGTGATAATGTA+GGG - chr5_1:14271330-14271349 Msa0719240:intron 35.0%
ATTCACAGAGAAATCCCAAT+AGG - chr5_1:14271565-14271584 Msa0719240:intron 35.0%
AAATTCACTAGTTAGGGCTA+AGG + chr5_1:14271982-14272001 None:intergenic 35.0%
AAATGAGAATAGAGGCTCAA+GGG - chr5_1:14272045-14272064 Msa0719240:intron 35.0%
! CTCAGCTTTGTCAAATTTCA+TGG - chr5_1:14272166-14272185 Msa0719240:intron 35.0%
ACTAGGGACAGAAGAAAATA+AGG - chr5_1:14272280-14272299 Msa0719240:intron 35.0%
!! AACTAAAGCCTCAAGTTGAA+GGG - chr5_1:14272303-14272322 Msa0719240:CDS 35.0%
CAGCTAGACTTACACATTAA+AGG - chr5_1:14272335-14272354 Msa0719240:CDS 35.0%
CTAGACTTACACATTAAAGG+TGG - chr5_1:14272338-14272357 Msa0719240:CDS 35.0%
AGCTGAAATGGAATCCAATA+TGG - chr5_1:14272385-14272404 Msa0719240:CDS 35.0%
CGAACTAGAGCGCAATATTT+AGG + chr5_1:14270375-14270394 None:intergenic 40.0%
GGCTTGATTGATGTATGTAG+TGG - chr5_1:14270557-14270576 Msa0719240:intron 40.0%
CGACTCCTAAATCTGTTCTA+AGG - chr5_1:14270647-14270666 Msa0719240:intron 40.0%
GAGTCTCAAATAAGTGAAGG+GGG - chr5_1:14271106-14271125 Msa0719240:intron 40.0%
GGGACTAATAACAACTATGG+AGG - chr5_1:14271317-14271336 Msa0719240:intron 40.0%
! CTATGGAGGTGATAATGTAG+GGG - chr5_1:14271331-14271350 Msa0719240:intron 40.0%
! TATGGAGGTGATAATGTAGG+GGG - chr5_1:14271332-14271351 Msa0719240:intron 40.0%
GAGATTGGAAGAACAACTTG+AGG - chr5_1:14271621-14271640 Msa0719240:intron 40.0%
TGCCTATAATGTATCATGCC+CGG - chr5_1:14271798-14271817 Msa0719240:CDS 40.0%
CAAATGAGAATAGAGGCTCA+AGG - chr5_1:14272044-14272063 Msa0719240:intron 40.0%
CAAACAAGCCTTTCTCAAGA+TGG - chr5_1:14272098-14272117 Msa0719240:intron 40.0%
!! GAACTAAAGCCTCAAGTTGA+AGG - chr5_1:14272302-14272321 Msa0719240:CDS 40.0%
!! ACTAAAGCCTCAAGTTGAAG+GGG - chr5_1:14272304-14272323 Msa0719240:CDS 40.0%
ATCTGTAGATGGAGCTGAAA+TGG - chr5_1:14272373-14272392 Msa0719240:CDS 40.0%
CGAACTAGAGCGCAATATTT+AGG + chr5_1:14270375-14270394 None:intergenic 40.0%
GGCTTGATTGATGTATGTAG+TGG - chr5_1:14270557-14270576 Msa0719240:intron 40.0%
CGACTCCTAAATCTGTTCTA+AGG - chr5_1:14270647-14270666 Msa0719240:intron 40.0%
GAGTCTCAAATAAGTGAAGG+GGG - chr5_1:14271106-14271125 Msa0719240:intron 40.0%
GGGACTAATAACAACTATGG+AGG - chr5_1:14271317-14271336 Msa0719240:intron 40.0%
! CTATGGAGGTGATAATGTAG+GGG - chr5_1:14271331-14271350 Msa0719240:intron 40.0%
! TATGGAGGTGATAATGTAGG+GGG - chr5_1:14271332-14271351 Msa0719240:intron 40.0%
GAGATTGGAAGAACAACTTG+AGG - chr5_1:14271621-14271640 Msa0719240:intron 40.0%
TGCCTATAATGTATCATGCC+CGG - chr5_1:14271798-14271817 Msa0719240:CDS 40.0%
CAAATGAGAATAGAGGCTCA+AGG - chr5_1:14272044-14272063 Msa0719240:intron 40.0%
CAAACAAGCCTTTCTCAAGA+TGG - chr5_1:14272098-14272117 Msa0719240:intron 40.0%
!! GAACTAAAGCCTCAAGTTGA+AGG - chr5_1:14272302-14272321 Msa0719240:CDS 40.0%
!! ACTAAAGCCTCAAGTTGAAG+GGG - chr5_1:14272304-14272323 Msa0719240:CDS 40.0%
ATCTGTAGATGGAGCTGAAA+TGG - chr5_1:14272373-14272392 Msa0719240:CDS 40.0%
AACAAAGCGGTCGTGAAGAT+CGG + chr5_1:14270136-14270155 None:intergenic 45.0%
TTGTGACAGCGTCAACAAAG+CGG + chr5_1:14270149-14270168 None:intergenic 45.0%
! ATGGAGGTGATAATGTAGGG+GGG - chr5_1:14271333-14271352 Msa0719240:intron 45.0%
!! TCCCAATAGGAGAAGCACTA+AGG - chr5_1:14271578-14271597 Msa0719240:intron 45.0%
GCCTTAGTGCTTCTCCTATT+GGG + chr5_1:14271582-14271601 None:intergenic 45.0%
TGCCTTAGTGCTTCTCCTAT+TGG + chr5_1:14271583-14271602 None:intergenic 45.0%
GACCGGGCATGATACATTAT+AGG + chr5_1:14271803-14271822 None:intergenic 45.0%
TGTCCTTCGCACTCTACAAT+AGG - chr5_1:14271831-14271850 Msa0719240:intron 45.0%
AGTCCTATTGTAGAGTGCGA+AGG + chr5_1:14271837-14271856 None:intergenic 45.0%
!! AGAGGCTCAAGGGAAGTATT+TGG - chr5_1:14272055-14272074 Msa0719240:intron 45.0%
TGCTCTGTCCATCTTGAGAA+AGG + chr5_1:14272109-14272128 None:intergenic 45.0%
!! CTAAAGCCTCAAGTTGAAGG+GGG - chr5_1:14272305-14272324 Msa0719240:CDS 45.0%
AACAAAGCGGTCGTGAAGAT+CGG + chr5_1:14270136-14270155 None:intergenic 45.0%
TTGTGACAGCGTCAACAAAG+CGG + chr5_1:14270149-14270168 None:intergenic 45.0%
! ATGGAGGTGATAATGTAGGG+GGG - chr5_1:14271333-14271352 Msa0719240:intron 45.0%
!! TCCCAATAGGAGAAGCACTA+AGG - chr5_1:14271578-14271597 Msa0719240:intron 45.0%
GCCTTAGTGCTTCTCCTATT+GGG + chr5_1:14271582-14271601 None:intergenic 45.0%
TGCCTTAGTGCTTCTCCTAT+TGG + chr5_1:14271583-14271602 None:intergenic 45.0%
GACCGGGCATGATACATTAT+AGG + chr5_1:14271803-14271822 None:intergenic 45.0%
TGTCCTTCGCACTCTACAAT+AGG - chr5_1:14271831-14271850 Msa0719240:intron 45.0%
AGTCCTATTGTAGAGTGCGA+AGG + chr5_1:14271837-14271856 None:intergenic 45.0%
!! AGAGGCTCAAGGGAAGTATT+TGG - chr5_1:14272055-14272074 Msa0719240:intron 45.0%
TGCTCTGTCCATCTTGAGAA+AGG + chr5_1:14272109-14272128 None:intergenic 45.0%
!! CTAAAGCCTCAAGTTGAAGG+GGG - chr5_1:14272305-14272324 Msa0719240:CDS 45.0%
GAGGGAGAGGAGGAATTGAA+GGG - chr5_1:14270052-14270071 Msa0719240:CDS 50.0%
! GGAGGAATTGAAGGGTACGA+TGG - chr5_1:14270060-14270079 Msa0719240:CDS 50.0%
GTTGACGCTGTCACAAAGCT+TGG - chr5_1:14270153-14270172 Msa0719240:CDS 50.0%
!! GGCTCAAGGGAAGTATTTGG+AGG - chr5_1:14272058-14272077 Msa0719240:intron 50.0%
ATTGCACCCCCTTCAACTTG+AGG + chr5_1:14272314-14272333 None:intergenic 50.0%
GAGGGAGAGGAGGAATTGAA+GGG - chr5_1:14270052-14270071 Msa0719240:CDS 50.0%
! GGAGGAATTGAAGGGTACGA+TGG - chr5_1:14270060-14270079 Msa0719240:CDS 50.0%
GTTGACGCTGTCACAAAGCT+TGG - chr5_1:14270153-14270172 Msa0719240:CDS 50.0%
!! GGCTCAAGGGAAGTATTTGG+AGG - chr5_1:14272058-14272077 Msa0719240:intron 50.0%
ATTGCACCCCCTTCAACTTG+AGG + chr5_1:14272314-14272333 None:intergenic 50.0%
ATGGAAAGTGGAGGGAGAGG+AGG - chr5_1:14270042-14270061 Msa0719240:CDS 55.0%
GGAGGGAGAGGAGGAATTGA+AGG - chr5_1:14270051-14270070 Msa0719240:CDS 55.0%
TCGGTTGTCCACCTCAACCT+CGG + chr5_1:14270117-14270136 None:intergenic 55.0%
GACGCTGTCACAAAGCTTGG+TGG - chr5_1:14270156-14270175 Msa0719240:CDS 55.0%
GAAGGACACAACGAACGACC+GGG + chr5_1:14271819-14271838 None:intergenic 55.0%
CGAAGGACACAACGAACGAC+CGG + chr5_1:14271820-14271839 None:intergenic 55.0%
ATGGAAAGTGGAGGGAGAGG+AGG - chr5_1:14270042-14270061 Msa0719240:CDS 55.0%
GGAGGGAGAGGAGGAATTGA+AGG - chr5_1:14270051-14270070 Msa0719240:CDS 55.0%
TCGGTTGTCCACCTCAACCT+CGG + chr5_1:14270117-14270136 None:intergenic 55.0%
GACGCTGTCACAAAGCTTGG+TGG - chr5_1:14270156-14270175 Msa0719240:CDS 55.0%
GAAGGACACAACGAACGACC+GGG + chr5_1:14271819-14271838 None:intergenic 55.0%
CGAAGGACACAACGAACGAC+CGG + chr5_1:14271820-14271839 None:intergenic 55.0%
TCCACCTCAACCTCGGCTTC+GGG + chr5_1:14270110-14270129 None:intergenic 60.0%
GTCCACCTCAACCTCGGCTT+CGG + chr5_1:14270111-14270130 None:intergenic 60.0%
TCCACCTCAACCTCGGCTTC+GGG + chr5_1:14270110-14270129 None:intergenic 60.0%
GTCCACCTCAACCTCGGCTT+CGG + chr5_1:14270111-14270130 None:intergenic 60.0%
TGACGAGAGACCCGAAGCCG+AGG - chr5_1:14270097-14270116 Msa0719240:CDS 65.0%
GAGACCCGAAGCCGAGGTTG+AGG - chr5_1:14270103-14270122 Msa0719240:CDS 65.0%
ACCCGAAGCCGAGGTTGAGG+TGG - chr5_1:14270106-14270125 Msa0719240:CDS 65.0%
TGACGAGAGACCCGAAGCCG+AGG - chr5_1:14270097-14270116 Msa0719240:CDS 65.0%
GAGACCCGAAGCCGAGGTTG+AGG - chr5_1:14270103-14270122 Msa0719240:CDS 65.0%
ACCCGAAGCCGAGGTTGAGG+TGG - chr5_1:14270106-14270125 Msa0719240:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 14270042 14272433 14270042 ID=Msa0719240;Name=Msa0719240
chr5_1 mRNA 14270042 14272433 14270042 ID=Msa0719240-mRNA-1;Parent=Msa0719240;Name=Msa0719240-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|6|0|276
chr5_1 exon 14272289 14272433 14272289 ID=Msa0719240-mRNA-1:exon:5616;Parent=Msa0719240-mRNA-1
chr5_1 exon 14271755 14271831 14271755 ID=Msa0719240-mRNA-1:exon:5615;Parent=Msa0719240-mRNA-1
chr5_1 exon 14271394 14271454 14271394 ID=Msa0719240-mRNA-1:exon:5614;Parent=Msa0719240-mRNA-1
chr5_1 exon 14271121 14271193 14271121 ID=Msa0719240-mRNA-1:exon:5613;Parent=Msa0719240-mRNA-1
chr5_1 exon 14270833 14270902 14270833 ID=Msa0719240-mRNA-1:exon:5612;Parent=Msa0719240-mRNA-1
chr5_1 exon 14270042 14270446 14270042 ID=Msa0719240-mRNA-1:exon:5611;Parent=Msa0719240-mRNA-1
chr5_1 CDS 14272289 14272433 14272289 ID=Msa0719240-mRNA-1:cds;Parent=Msa0719240-mRNA-1
chr5_1 CDS 14271755 14271831 14271755 ID=Msa0719240-mRNA-1:cds;Parent=Msa0719240-mRNA-1
chr5_1 CDS 14271394 14271454 14271394 ID=Msa0719240-mRNA-1:cds;Parent=Msa0719240-mRNA-1
chr5_1 CDS 14271121 14271193 14271121 ID=Msa0719240-mRNA-1:cds;Parent=Msa0719240-mRNA-1
chr5_1 CDS 14270833 14270902 14270833 ID=Msa0719240-mRNA-1:cds;Parent=Msa0719240-mRNA-1
chr5_1 CDS 14270042 14270446 14270042 ID=Msa0719240-mRNA-1:cds;Parent=Msa0719240-mRNA-1
Gene Sequence

>Msa0719240

ATGGAAAGTGGAGGGAGAGGAGGAATTGAAGGGTACGATGGAGTGATGATGACGATGACGAGAGACCCGAAGCCGAGGTTGAGGTGGACAACCGATCTTCACGACCGCTTTGTTGACGCTGTCACAAAGCTTGGTGGCCCTGACAAGGCGACTCCTAAATCTGTTCTAAGGTTAATGGGATTAAAAGGTTTGACATTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAACATGCTCGAAAACAAAATGAAGAACAATTCAAAGAGAATAACAGATGTTCGTATGTAAATTTCAGTAACCATTCTTCAGGGACTAATAACAACTATGGAGGTGATAATGTAGGGGGAGAAATCCCAATAGGAGAAGCACTAAGGCAACAAATTGAAGTTCAAAAGAGATTGGAAGAACAACTTGAGGTACAAAATAAATTGCAAATGAGAATAGAGGCTCAAGGGAAGTATTTGGAGGCAGTGTTAGAGAAAGCACAAACAAGCCTTTCTCAAGATGGACAGAGCAATCTTAATGCATCAAAAGCTCAATTGGTTGAGTTCAACTCAGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATAGTAAAGAAAACATACTAGACATGAATGAATTTCATAATAAGAATCATGCTCAAGCTTTCAATTATCAAGAAGTACTAGGGACAGAAGAAAATAAGGAACTAAAGCCTCAAGTTGAAGGGGGTGCAATACAGCTAGACTTACACATTAAAGGTGGCAATGAACTTGTATCTGTAGATGGAGCTGAAATGGAATCCAATATGGTTTCATATAGGGTATACCATTTTTGA
Protein sequence

>Msa0719240

MESGGRGGIEGYDGVMMTMTRDPKPRLRWTTDLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQHARKQNEEQFKENNRCSYVNFSNHSSGTNNNYGGDNVGGEIPIGEALRQQIEVQKRLEEQLEVQNKLQMRIEAQGKYLEAVLEKAQTSLSQDGQSNLNASKAQLVEFNSALSNFMENMNKDSKENILDMNEFHNKNHAQAFNYQEVLGTEENKELKPQVEGGAIQLDLHIKGGNELVSVDGAEMESNMVSYRVYHF*